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Schistosoma mansoni
cluster # 10369 cluster # 10369       Sequences # 15       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10369#0 length = 2180 sequences # 11  
consensus_10369#1 length = 538 sequences # 2  
consensus_10369#2 length = 368 sequences # 1  
consensus_10369#3 length = 292 sequences # 1  

consensusID : consensus_10369#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 2180
fasta sequence
                              [GGTTTTCAATCCTTCTCCAAGGCGCGCGTTTTGTAAATTAATAACGTGTCCTTATGGAGAACCCTGTTTTTGATGATCCTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGTACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAGTTAGAACGAGAGAAAATGCACAGATATATCCGGGAGCTGGAACAGTTAAATGACGATTTAGAACGTTCTAAAAGAGCGGCAGTTGTAACATTAGAAGATTTTGAATCCCGCTTAAACCAGGCTATTGAGAGAAATGCATTTTTGGAGAATGAGTTAGATGAAAAGGAGGATCTAATGGTAACTGTCCAGCGACTTAAAGATGAAACTAGAGACCTCCACCAAGAATTGGCCATAACTCGCCGTCAACCTGAACTGGGTACTTCACCAGAAGTATGTAATGGAGGCAATACCATCCCTTCCAAAAGTTTGAATAAAATCGATACAAAAGATTCTATGGTACAGACAGAAAACAGTTGCTTTTTTAATTCAATACTTACTCCATCTGTCAGATTATCTGCTTTAAATATGGGGAATAATGCTTTGCAAAGAATAGGACAGTTAGAAATGAAATTGTCTATATTATATAAAACATACGGTCATCCTCCACTTTCTGCACCAGTATATAATGGTAATAGCGACAGTAATAACTGTAATATACACTCTCCATCATCTGATTTCGAATTGAAAAGATATAATTTAAAGTCACCACAAAGATTATCTAATCCAAG-TTGGACAAATGGTCCTATTAAATTAGATCCTCTTCCAACTGCTGAAAAATCATCTCGGGAAAATTCTATACATTTTGTTCATTGAAATTAATGTAAACTAAAAAAGATGTCAATTCATTTCATCTTTCTATACATCTTACCCCTGTTCTATGACTAAATATTATTTATGTAAAGACTGTGTTTCTTGTTGTATTTGTGAATAATCTTTATTTTGGATTAAGAAAAACGGTGCATTTCATCAATTTTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTGAGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCTAATTACCACACTCATAAGATTCTACTTATTCTGATAAATCTTATACCGAATAACCTTTCTATTTCTGCATGAACCAAGGTGCTCGCGGTTGCCGTTCAGCTTTCATTTTGTTCCAGCTATTCCTCTTTGTGTTCTGTCTTTCTCCTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACTGAAGTCTATGGTATTTATTATCTCTGTCTATCTTTTCATGTATCTGTTTGTCCTATTCATTACTCTTTCTTTCAAAACATTATAAGGAGGCATTTTCCACTTAGTACATGTATATGTGTGTATGTATAAGGCCATTTATTGAATAGTACGATTAATGCCAGTTAAGTCACTTGTTAACAAATAAGAAGATATATATGATTTTCATATAAATTACTTTCATTCTCATCTGTATTTATCACATCATATAATTATATTCATTAGTTTTATTGCACTCACACATATATTATCACTGATGAAGAGATGTGGGGGTAATATATTCATCATTTTATTTTTATCATTCGTTTTATTCCTTGTATAGTTTGTCTTTTTTTTCTAAAGTTTGCTCCTTTTTCTGGTCATATCTACTTCATGTTCGCCCTCCTTTTTAGTTTTTATCATCCACTTTGTATTTTTTGTAACTATCAAATTGGAATTCATTTTACCTCCAAAACATATTAACATTATTATTATTATTGCCATTTGTTTCTTCATTTAAAATATATTTCTTACTATTTTTCTTTCTTTTTGTCTACAATTGTACAATCTATCATTGATAAAATGTTAAATTGTTTTTTTAAAAAAGATTTATATTTATGGTGATCTAATTGTACCTACTCTAAAAATGGTTCAACATGACAGTC]

[+] EMBL CD183237             [GGTTTTCAATCCTTCTCCAAGGCGCGCGTTTTGTAAATTAATAACGTGTCCTTATGGAGAACCCTGTTTTTGATGATCCTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGTACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAGTTAGAACGAGAGAAAATGCACAGATATATCCGGGAGCTGGAACAGTTAAATGACGATTTAGAACGTTCTAAAAGAGCGGCAGTTGTAACATTAGAAGATTTTGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD096897             [                                                                                          CCAAATATTGGCGACAAAAGGCTGAAGAGTACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAGTTAGAACGAGAGAAAATGCACAGATATATCCGGGAGCTGGAACAGTTAAATGACGA TTAGAACGTTCTAAAAGAGCGGCAGTTGTAACATTAGAAGATTTTGAATCCCGCTTAAACCAGGCTATTGAGAGAAATGCATTTTTGGAGAATGAGTTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD087616             [                                                                                                                               taGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAGTTAGAACGAGAGAAAATGCACAGATATATCCGGGAGCTGGAACAGTTAAATGACGATTTATAACGTTCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD095709             [                                                                                                                                                                         TAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAGTTAGAACGAGAGAAAATGCACAGATATATCCGGGAGCTGGAACAGTTAAATGACGATTTAGAACGTTCTAAAAGAGCGGCAGTCGTAACATTAGAAGATTTTGAATCCCGCTTAAACCAGGCTATTGAGAGAAATGCATTTTTGGAGAATGAGTTAGATGAAAAGGAGGATCTAATGGTAACTGTCCAGCGACTTAAAGATGAAACTAGAGACCTCCACCAAGAATTGGCCATAACTCGCCGTCAACCTGAACTGGGTACTTCACCAGAAGTATGTAATGGAGGCAATACCATCCCTTCCAAAAGTTTGAATAAAATCGATACAAAAGATTCTATGGTACAGACAGAAAACAGTTGCTTTTTTAATTCAATACTTACTCCATCTGTCAGATTATCTGCTTTAAATATGGGGAATAATGCTTTGCAAAGAATAGGACAGTTAGAAATGAAATTGTCTATATTATATAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD094620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGCCATAACTCGCCGTCAACCTGAACTGGGTACTTCACCAGAAGTATGTAATGGAGGCAATACCATCCCTTCCAAAAGTTTGAATAAAATCGATACAAAAGATTCTATGGTACAGACAGAAAACAGTTGCTTTTTTAATTCAATACTTACTCCATCTGTCAGATTATCTGCTTTAAATATGGTGAATAATGCTTTGCAAAGAATAGGACAGTTAGAAATGAAATTGTCTATATTATATAAGACATACGGTCATCCTCCACTTTCTGCACCAGTATATAATGGTAATAGCGACAGTAATAACTGTAATATACACTCTCCATCATCTGATTTCGAATTGAAAAGATATAATTTAAAGTCACCACANAGATTATCTAATCCAAGTTTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD095302             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGTAATATACACTCTCCATCATCTGATTTCGAATTGAAAAGATATAATTTAAAGTCACCACAAAGATTATCTAATCCAAG TTGGACAAATGGTCCTATTAAATTAGATCCTCTTCCAACTGCTGAAAAATCATCTCGGGAAAATTCTATACATTTTGTTCATTGAAATTAATGTAAACTAAAAAAGATGTCAATTCATTTCATCTTTCTATACATCTTACCCCTGTTCTATGACTAAATATTATTTATGTAAAGCCTGTGTTTCTTGTTGTATTTGTAAATAATCTTTATTTTGGATTAAGAAAAACGGTGCATTTCATCAATTTTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTGAGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCTAATTACCACACTCATAAGATTCTACTTATTCGGATAAATCTTATACCGAATAACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD095052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTCGAATTGAAAAGATATAATTTANAGTCACCACAAAGATTATCTAATCCAAG TTGGACAAATGGTCCTATTAAATTAGATCCTCTTCCAACTGCTGAAAAATCATCTCGGGAAAATTCTATACATTTTGTTCATTGAAATTAATGTAAACTAAAAAAGATGTCAATTCATTTCATCTTTCTATACATCTTACCCCTGTTCTATGACTAAATATTATTTATGTAAAGACTGTGTTTCTTGTTGTATTTGTGAATAATCTTTATTTTGGATTAAGAAAAACGGTGCATTTCATCAATTCTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTGAGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCTAATTACCACACTCATAAGATTCTACTTATTCTGATAAATCTTATACCGAATAACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD095014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGGTCCTATTAAATTAGATCCTCTTCCAACTGCTGAAAAATCATCTCGGGAAAATTCTATACATTTTGTTCATTGAAATTAATGTAAACTAAAAAAGATGTCAATTCATTTCATCTTTCTATACATCTTACCCCTGTTCTATGACTAAATATTATTTATGTAAAGACTGTGTTTCTTGTTGTATTTGTGAATAATCTTTATTTTGGATTAAGAAAAACGGTGCATTTCATCAATTTTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTGAGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCAAATTACCACACTCATAAGATTCTACTTATTCTGATAAATCTTATACCGAATAACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD194431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATTTTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTGAGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCTAATTACCACACTCATAAGATTCTACTTATTCTGATAAATCTTATACCGAATAACCTTTCTATTTCTGCATGAACCAAGGTGCTCGCGGTTGCCGTTCAGCTTTCATTTTGTTCCAGCTATTCCTCTTTGTGTTCTGTCTTTCTCCTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACTGAAGTCTATGGTATTTATTATCTCTGTCTATCTTTTCATGTATCTGTTTGTCCTATTCATTACTCTTTCTTTCAAAACATTATAAGGAGGCATTTTCCACTTAGTACATGTATATGTGTGTATGTATAAGGCCATTTATTGAATAGTACGATTAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD194327             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AATTTTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTGAGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCTAATTACCACACTCATAAGATTCTACTTATTCTGATAAATCTTATACCGAATAACCTTTCTATTTCTGCATGAACCAAGGTGCTCGCGGTTGCCGTTCAGCTTTCATTTTGTTCCAGCTATTCCTCTTTGTGTTCTGTCTTTCTCCTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACTGAAGTCTATGGTATTTATTATCTCTGTCTATCTTTTCATGTATCTGTTTGTCCTATTCATTACTCTTTTTTTCAAAACATTATAAGGAGGCATTTTCCACTTAGTACATGTATATGTGTGTATGTATAAGGCCATTTATTGAATAGTACGATTAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD131393             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tcAAACA TATAAGGAGGCA TTTCCACTTAGTACATGTATATGTGTGTATGTATAAGGCCATTTATTGAATAGTACGATTAATGCCAGTTAAGTCACTTGTTAACAAATAAGAAGATATATATGATTTTCATATAAATTACTTTCATTCTCATCTGTATTTATCACATCATATAATTATATTCATTAGTTTTATTGCACTCACACATATATTATCACTGATGAAGAGATGTGGGGGTAATATATTCATCATTTTATTTTTATCATTCGTTTTATTCCTTGTATAGTTTGTCTTTTTTTTCTAAAGTTTGCTCCTTTTTCTGGTCATATCTACTTCATGTTCGCCCTCCTTTTTAGTTTTTATCATCCACTTTGTATTTTTTGTAACTATCAAATTGGAATTCATTTTACCTCCAAAACATATTAACATTATTATTATTATTGCCATTTGTTTCTTCATTTAAAATATATTTCTTACTATTTTTCTTTCTTTTTGTCTACAATTGTACAATCTATCATTGATAAAATGTTAAATTGTTTTTTTAAAAAAGATTTATATTTATGGTGATCTAATTGTACCTACTCTAAAAATGGTTCAACATGACAGTC]


>consensus_10369#0 GGTTTTCAATCCTTCTCCAAGGCGCGCGTTTTGTAAATTAATAACGTGTCCTTATGGAGA ACCCTGTTTTTGATGATCCTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGT ACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAG AACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAG TTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTCATAAGGCGGAAAATA GTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAGT TAGAACGAGAGAAAATGCACAGATATATCCGGGAGCTGGAACAGTTAAATGACGATTTAG AACGTTCTAAAAGAGCGGCAGTTGTAACATTAGAAGATTTTGAATCCCGCTTAAACCAGG CTATTGAGAGAAATGCATTTTTGGAGAATGAGTTAGATGAAAAGGAGGATCTAATGGTAA CTGTCCAGCGACTTAAAGATGAAACTAGAGACCTCCACCAAGAATTGGCCATAACTCGCC GTCAACCTGAACTGGGTACTTCACCAGAAGTATGTAATGGAGGCAATACCATCCCTTCCA AAAGTTTGAATAAAATCGATACAAAAGATTCTATGGTACAGACAGAAAACAGTTGCTTTT TTAATTCAATACTTACTCCATCTGTCAGATTATCTGCTTTAAATATGGGGAATAATGCTT TGCAAAGAATAGGACAGTTAGAAATGAAATTGTCTATATTATATAAAACATACGGTCATC CTCCACTTTCTGCACCAGTATATAATGGTAATAGCGACAGTAATAACTGTAATATACACT CTCCATCATCTGATTTCGAATTGAAAAGATATAATTTAAAGTCACCACAAAGATTATCTA ATCCAAGTTGGACAAATGGTCCTATTAAATTAGATCCTCTTCCAACTGCTGAAAAATCAT CTCGGGAAAATTCTATACATTTTGTTCATTGAAATTAATGTAAACTAAAAAAGATGTCAA TTCATTTCATCTTTCTATACATCTTACCCCTGTTCTATGACTAAATATTATTTATGTAAA GACTGTGTTTCTTGTTGTATTTGTGAATAATCTTTATTTTGGATTAAGAAAAACGGTGCA TTTCATCAATTTTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTG AGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCTAATTACCAC ACTCATAAGATTCTACTTATTCTGATAAATCTTATACCGAATAACCTTTCTATTTCTGCA TGAACCAAGGTGCTCGCGGTTGCCGTTCAGCTTTCATTTTGTTCCAGCTATTCCTCTTTG TGTTCTGTCTTTCTCCTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACT GAAGTCTATGGTATTTATTATCTCTGTCTATCTTTTCATGTATCTGTTTGTCCTATTCAT TACTCTTTCTTTCAAAACATTATAAGGAGGCATTTTCCACTTAGTACATGTATATGTGTG TATGTATAAGGCCATTTATTGAATAGTACGATTAATGCCAGTTAAGTCACTTGTTAACAA ATAAGAAGATATATATGATTTTCATATAAATTACTTTCATTCTCATCTGTATTTATCACA TCATATAATTATATTCATTAGTTTTATTGCACTCACACATATATTATCACTGATGAAGAG ATGTGGGGGTAATATATTCATCATTTTATTTTTATCATTCGTTTTATTCCTTGTATAGTT TGTCTTTTTTTTCTAAAGTTTGCTCCTTTTTCTGGTCATATCTACTTCATGTTCGCCCTC CTTTTTAGTTTTTATCATCCACTTTGTATTTTTTGTAACTATCAAATTGGAATTCATTTT ACCTCCAAAACATATTAACATTATTATTATTATTGCCATTTGTTTCTTCATTTAAAATAT ATTTCTTACTATTTTTCTTTCTTTTTGTCTACAATTGTACAATCTATCATTGATAAAATG TTAAATTGTTTTTTTAAAAAAGATTTATATTTATGGTGATCTAATTGTACCTACTCTAAA AATGGTTCAACATGACAGTC



consensusID : consensus_10369#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 538
fasta sequence
                              [TACGCCCTTCATTCTTTTGCTAGAACACTAGTGGCTTGTTATTCTTTACTACGAGTTTTTGATGTTGCAGATATTCGTGTTTTTTCTAAGAATAATGATAAACCTTACCAATGCCTCAACTTGTATTTTTATTTCTCTTTAGATAACGTGTCCTTATGGAGAACCCTGTTTTTGATGATCCTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGTACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTGTAAGTGTAAACACAGTGATATTTTGAGACAGCTGTTCTGGATAAAAAATAATATTTTCGGTTCTTGCTATTTGTAGCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAG]

[+] EMBL CD162116             [TACGCCCTTCATTCTTTTGCTAGAACACTAGTGGCTTGTTATTCTTTACTACGAGTTTTTGATGTTGCAGATATTCGTGTTTTTTCTAAGAATAATGATAAACCTTACCAATGCCTCAACTTGTATTTTTATTTCTCTTTAGATAACGTGTCCTTATGGAGAACCCTGTTTTTGATGATCCTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGTACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTGTAAGTGTAAACACAGTGATATTTTGAGACAGCTGTTCTGGATAAAAAATAATATTTTCGGTTCTTGCTATTTGTAGCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAG]
[+] EMBL CD162107             [TACGCCCTTCATTCTTTTGCTAGAACACTAGTGGCTTGTTATTCTTTACTACGAGTTTTTGATGTTGCAGATATTCGTGTTTTTTCTAAGAATAATGATAAACCTTACCAATGCCTCAACTTGTATTTTTATTTCTCTTTAGATAACGTGTCCTTATGGAGAACCCTGTTTTTGATGATCCTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGTACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTGTAAGTGTAAACACAGTGATATTTTGAGACAGCTGTTCTGGATAAAAAATAATATTTTCGGTTCTTGCTATTTGTAGCATAAGGCGGAAAATAGTCAAGAATAT                                                ]


>consensus_10369#1 TACGCCCTTCATTCTTTTGCTAGAACACTAGTGGCTTGTTATTCTTTACTACGAGTTTTT GATGTTGCAGATATTCGTGTTTTTTCTAAGAATAATGATAAACCTTACCAATGCCTCAAC TTGTATTTTTATTTCTCTTTAGATAACGTGTCCTTATGGAGAACCCTGTTTTTGATGATC CTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGTACCGTAGCGGTATGGAAG AAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAGAACTGGAACTAGAGCTTG AGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAGTTGTATTGTGCGAAAAGC TAACTGTTGAAAAAGATACCTACCGTGTAAGTGTAAACACAGTGATATTTTGAGACAGCT GTTCTGGATAAAAAATAATATTTTCGGTTCTTGCTATTTGTAGCATAAGGCGGAAAATAG TCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAG



consensusID : consensus_10369#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 368
fasta sequence
                              [AGGTGCTCGCGGTTGCCGATCAGCTTTCATTTTGTTCCACCTATTCCTCTTTGTGTTCTGGCTTTCTACTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACTGAAGACTATGGCATTTATTATCTCTGTCTATCTTCCGGCTGTGCTGTTTGNCCTATACATTACTCTTTTTTTCAAAACATTATAAGGAGGCATTGTCCACTTACTACATGTATATGTGTGCATGTATAAGGCCATTCATTGAATAGCACGATTAATGCCAATTAATTCACTTGTTAACAAATACCACCATAGATATCATTTTCATATAAATCACTTTCATTCGCATCTGTATTTATCACATCATATAAGCATATT]

[+] EMBL CD090495             [AGGTGCTCGCGGTTGCCGATCAGCTTTCATTTTGTTCCACCTATTCCTCTTTGTGTTCTGGCTTTCTACTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACTGAAGACTATGGCATTTATTATCTCTGTCTATCTTCCGGCTGTGCTGTTTGNCCTATACATTACTCTTTTTTTCAAAACATTATAAGGAGGCATTGTCCACTTACTACATGTATATGTGTGCATGTATAAGGCCATTCATTGAATAGCACGATTAATGCCAATTAATTCACTTGTTAACAAATACCACCATAGATATCATTTTCATATAAATCACTTTCATTCGCATCTGTATTTATCACATCATATAAGCATATT]


>consensus_10369#2 AGGTGCTCGCGGTTGCCGATCAGCTTTCATTTTGTTCCACCTATTCCTCTTTGTGTTCTG GCTTTCTACTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACTGAAGACT ATGGCATTTATTATCTCTGTCTATCTTCCGGCTGTGCTGTTTGNCCTATACATTACTCTT TTTTTCAAAACATTATAAGGAGGCATTGTCCACTTACTACATGTATATGTGTGCATGTAT AAGGCCATTCATTGAATAGCACGATTAATGCCAATTAATTCACTTGTTAACAAATACCAC CATAGATATCATTTTCATATAAATCACTTTCATTCGCATCTGTATTTATCACATCATATA AGCATATT



consensusID : consensus_10369#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 292
fasta sequence
                              [CACTCACACATACATTATCACTGATGAAAAAGATGTGGGGGTAATATATTCATCATTTTATTTTTATCATTCGTTTTATNCCTTGTATAGTTNGTCTTTTTTTNCTAAAGTTNGCNCCTTTTNCTGGTCATATCTACTTCATGTNCGCCCNCCCTTTTAGTTTTTATCANCCACTTTGGTATTTTTNGTAACTATCAAATTGGAATTCATTTTACCNCCAAAACATATTAACATTATTATTATTAATATTACCANTTGTTTCCTCCATTTAAAATATATTNCCTAACNAATT]

[+] EMBL AA559607             [CACTCACACATACATTATCACTGATGAAAAAGATGTGGGGGTAATATATTCATCATTTTATTTTTATCATTCGTTTTATNCCTTGTATAGTTNGTCTTTTTTTNCTAAAGTTNGCNCCTTTTNCTGGTCATATCTACTTCATGTNCGCCCNCCCTTTTAGTTTTTATCANCCACTTTGGTATTTTTNGTAACTATCAAATTGGAATTCATTTTACCNCCAAAACATATTAACATTATTATTATTAATATTACCANTTGTTTCCTCCATTTAAAATATATTNCCTAACNAATT]


>consensus_10369#3 CACTCACACATACATTATCACTGATGAAAAAGATGTGGGGGTAATATATTCATCATTTTA TTTTTATCATTCGTTTTATNCCTTGTATAGTTNGTCTTTTTTTNCTAAAGTTNGCNCCTT TTNCTGGTCATATCTACTTCATGTNCGCCCNCCCTTTTAGTTTTTATCANCCACTTTGGT ATTTTTNGTAACTATCAAATTGGAATTCATTTTACCNCCAAAACATATTAACATTATTAT TATTAATATTACCANTTGTTTCCTCCATTTAAAATATATTNCCTAACNAATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10369#0      GGTTTTCAATCCTTCTCCAAGGCGCGCGTTTTGTAAATTAATAACGTGTCCTTATGGAGA 60
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      ACCCTGTTTTTGATGATCCTGGCAATGAAGCCAAATATTGGCGACAAAAGGCTGAAGAGT 120
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      ACCGTAGCGGTATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAGATTAGCTCACGAG 180
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      AACTGGAACTAGAGCTTGAGACTCAATTGGAACAATTAGAAAAGCGTAATTCAGAGCTAG 240
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TTGTATTGTGCGAAAAGCTAACTGTTGAAAAAGATACCTACCGTCATAAGGCGGAAAATA 300
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      GTCAAGAATATGTTAATCACGAAATAACTAGACTTCAAGATGAATTAGAGAAGTCGAAGT 360
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TAGAACGAGAGAAAATGCACAGATATATCCGGGAGCTGGAACAGTTAAATGACGATTTAG 420
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      AACGTTCTAAAAGAGCGGCAGTTGTAACATTAGAAGATTTTGAATCCCGCTTAAACCAGG 480
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      CTATTGAGAGAAATGCATTTTTGGAGAATGAGTTAGATGAAAAGGAGGATCTAATGGTAA 540
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      CTGTCCAGCGACTTAAAGATGAAACTAGAGACCTCCACCAAGAATTGGCCATAACTCGCC 600
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      GTCAACCTGAACTGGGTACTTCACCAGAAGTATGTAATGGAGGCAATACCATCCCTTCCA 660
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      AAAGTTTGAATAAAATCGATACAAAAGATTCTATGGTACAGACAGAAAACAGTTGCTTTT 720
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TTAATTCAATACTTACTCCATCTGTCAGATTATCTGCTTTAAATATGGGGAATAATGCTT 780
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TGCAAAGAATAGGACAGTTAGAAATGAAATTGTCTATATTATATAAAACATACGGTCATC 840
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      CTCCACTTTCTGCACCAGTATATAATGGTAATAGCGACAGTAATAACTGTAATATACACT 900
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      CTCCATCATCTGATTTCGAATTGAAAAGATATAATTTAAAGTCACCACAAAGATTATCTA 960
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      ATCCAAGTTGGACAAATGGTCCTATTAAATTAGATCCTCTTCCAACTGCTGAAAAATCAT 1020
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      CTCGGGAAAATTCTATACATTTTGTTCATTGAAATTAATGTAAACTAAAAAAGATGTCAA 1080
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TTCATTTCATCTTTCTATACATCTTACCCCTGTTCTATGACTAAATATTATTTATGTAAA 1140
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      GACTGTGTTTCTTGTTGTATTTGTGAATAATCTTTATTTTGGATTAAGAAAAACGGTGCA 1200
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TTTCATCAATTTTTCACTTTTAACCCAGAATTTCTTCTTATTATTATTGTAAAGTTTGTG 1260
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      AGGTGTTCTCCTAGAAAGACACAAATTTCTTTTAACACTCTGGAAAACTCTAATTACCAC 1320
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      ACTCATAAGATTCTACTTATTCTGATAAATCTTATACCGAATAACCTTTCTATTTCTGCA 1380
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TGAACCAAGGTGCTCGCGGTTGCCGTTCAGCTTTCATTTTGTTCCAGCTATTCCTCTTTG 1440
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TGTTCTGTCTTTCTCCTTTTCTATTGTTCTGTAAAATTATCTTATGTAATGCATTATACT 1500
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      GAAGTCTATGGTATTTATTATCTCTGTCTATCTTTTCATGTATCTGTTTGTCCTATTCAT 1560
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ------------------------------------------------------------
                                                                                   

consensus_10369#0      TACTCTTTCTTTCAAAACATTATAAGGAGGCATTTTCCACTTAGTACATGTATATGTGTG 1620
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      ----------------------------TACGCCCTTCATTCTTTTGCTAGAACACTAGT 32
                                                                                   

consensus_10369#0      TATGTATAAGGCCATTTATTGAATAGTACGATTAATGCCAGTTAAGTCACTTGTTAACAA 1680
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      GGCTTGTTATTCTTTACTACGAGTTTTTGATGTTGCAGATATTCGTGTTTTTTCTAAGAA 92
                                                                                   

consensus_10369#0      ATAAGAAGATATATATGATTTTCATATAAATTACTTTCATTCTCATCTGTATTTATCACA 1740
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ---------------------------AGGTGCTCGCGGTTGCCGATCAGCTTTCATTTT 33
consensus_10369#1      TAATGATAAACCTTACCAATGCCTCAACTTGTATTTTTATTTCTCTTTAGATAACGTGTC 152
                                                                                   

consensus_10369#0      TCATATAATTATATTCATTAGTTTTATTGCACTCACACATATATTATCACTGATGAAGA- 1799
consensus_10369#3      -----------------------------CACTCACACATACATTATCACTGATGAAAAA 31
consensus_10369#2      GTTCCACCTATTCCTCTTTGTGTTCTGGCTTTCTACTTTTCTATTGTTCTGTAAAATTAT 93
consensus_10369#1      CTTATGGAGAACCCTGTTTTTGATGATCCTGGCAATGAAGCCA--AATATTGGCGACAAA 210
                                                         *       *            *  * 

consensus_10369#0      GATGTGGGG-GTAATATATTCATCATTTTATTTTTATCATTCGTTTTATTCCTTGTATAG 1858
consensus_10369#3      GATGTGGGG-GTAATATATTCATCATTTTATTTTTATCATTCGTTTTATNCCTTGTATAG 90
consensus_10369#2      CTTATGTAATGCATTATACTGAAGACTATGGCATT--TATTATCTCTGTCTATCTTCCGG 151
consensus_10369#1      AGGCTGAAGAGTACCGTAGCGGT-ATGGAAGAAGCACGAGAAGAGCTGGAGGACTTCCAG 269
                           **    * *   **      *             *       *        *   *

consensus_10369#0      -TTTGTCTTTTTTTTCTAAAGTTTGCTCCTTTTTCTGG----TCATATCTACTTCATGTT 1913
consensus_10369#3      -TTNGTCTTTTTTTNCTAAAGTTNGCNCCTTTTNCTGG----TCATATCTACTTCATGTN 145
consensus_10369#2      -CTGTGCTGTTTGNCCTATACATTACTCTTTTTTTCAAAACATTATAAGGAGGCATTGTC 210
consensus_10369#1      ATTAGCTCACGAGAACTGGAACTAGAGCTTGAGACTCAA---TTGGAACAATTAGAAAAG 326
                         *            **  *  *    * *            *   *   *         

consensus_10369#0      CGCCCTCCTTTTTAGTTTTTAT-CATCCACTTTG-TATTTTTTGTA-ACTATCA--AATT 1968
consensus_10369#3      CGCCCNCCCTTTTAGTTTTTAT-CANCCACTTTGGTATTTTTNGTA-ACTATCA--AATT 201
consensus_10369#2      CACTTACTACATGTATATGTGTGCATGTATAAGGCCATTCATTGAATAGCACGATTAATG 270
consensus_10369#1      CGTAATTCAGAGCTAGTTGTAT-TGTGCGAAAAGCTAACTGTTGAAAAAGATACCTA--C 383
                       *                * * *           *  *    * * * *  *     *   

consensus_10369#0      GGAATTCATTTTACCTCCAAAACATATTAACAT---TATTATT-ATTA---TTGCCATTT 2021
consensus_10369#3      GGAATTCATTTTACCNCCAAAACATATTAACAT---TATTATT-ATTAATATTACCANTT 257
consensus_10369#2      CCAATTAATTCACTTGTTAACAAATACCACCATAGATATCATT-TTCATATAAATCACTT 329
consensus_10369#1      CGTGTAAGTGTAAACACAGTGATATTTTGAGACAGCTGTTCTGGATAAAAAATAATATTT 443
                           *   *            * **      *    * *  *   * *        * **

consensus_10369#0      GTTTCT---TC-ATTTAAAATATATTTCTTAC-TATTTTTCTTTCTTTTTGTCTACAATT 2076
consensus_10369#3      GTTTCC---TCCATTTAAAATATATTNCCTAA-CNAATT--------------------- 292
consensus_10369#2      TCATTCGCATCTGTATTTATCACATCATATAAGCATATT--------------------- 368
consensus_10369#1      TCGGTTCTTGCTATTTGTAGCATAAGGCGGAAAATAGTCAAGAATATGTTAATCACGAAA 503
                                 *  * *  *  * *      *      *                      

consensus_10369#0      GTACAATCTATCATTGATAAAATGTTAAATTGTTTTTTTAAAAAAGATTTATATTTATGG 2136
consensus_10369#3      ------------------------------------------------------------
consensus_10369#2      ------------------------------------------------------------
consensus_10369#1      TAACTAGACTTCAAGATGAATTAGAGAAGTCGAAG------------------------- 538
                                                                                   

consensus_10369#0      TGATCTAATTGTACCTACTCTAAAAATGGTTCAACATGACAGTC 2180
consensus_10369#3      --------------------------------------------
consensus_10369#2      --------------------------------------------
consensus_10369#1      --------------------------------------------
                                                                   




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)