cluster # 10387

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Schistosoma mansoni
cluster # 10387 cluster # 10387 Sequences # 16 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10387#0 length = 1730 sequences # 13

consensus_10387#1 length = 442 sequences # 2
consensus_10387#2 length = 387 sequences # 1

consensusID : consensus_10387#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1730
fasta sequence

                              [GGCGAAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTGAGACGTTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAGGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGATAAGGAAACTAAGATCACGCGCTTGAGT-AATGGTCTTCGTGTGGCTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACTGTCAAGTAGCCAGAGATTTTATAGTCTATGCAGTATCTGGTTTCAACACAAATATGGATAAACTTACGCACATATTATCTGAAACAGTTCTTAGGGCAAAAATTACTCAGGAAGAGGTTGAAATGGCAGCTAAAAGTATTTCTTTTGAACTGGAAGCCTTGGAAAGATCACCACCAGTTGAACCAATTATGAATGAACTACTACATGTG-GCTGCTTATAAAAATAACACACTTGGCTTGCCAAAGTATTGCCCTAAACAGAATTTAAATAAAATTAATCGCGAAGATATCATCAAATTTGTTGCCGCTCAATTCAAACCAGAGAACATGGTGGTAGCTGGTGTAGGAATTGAACATGATGCACTAGTAAAGTCTGTAGAGAAATACTTTATTCCAACAGTGCCTAATGTATCTTACGAAAAGGCGGCTAGTGATGTGCCTTCACCTATCACTACTGTCTCCGAATATACAGGTGGTTATTATAAGTTAGAACGTGATTTATCACAATATCATGCACCAATGCCTGAATATGCTCATGTTGGTATCGGTTTTGAATCATGCAGTTATACAGATCCACAGTTCGTATCAGCTTGTGTACTTCATTCATTGCTTGGTGGAGGTGGATCTTTTTCAGCTGGTGGACCCGGCAAGGGTATGTATACTCGACTATATTTAAATATTTTAAATAAACACCATTGGGTTAATTCAGCACAGGCTGAAAATCATGCTTATGCTGATACAGGATTATTTACTGTTATTGGCAGTTCATTTCCAACTTATCTAGATCGTTTAGTCTATACTTTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGCTAAACATCAGTTGAAATCTATGCTTCTAATGAATTTAGAAACTCGTGCTGTTTG-TTTTG-AGATATCGCTCGTCAAGTGCTTACATCTGATATGAAACGTGAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAGTGATCTTCATGAACTTCTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGATACTATTTCTCTGTTAAATAGCGAATCATATAAAGAGAGGAAATCAAAGTCAAGAACCATTTTTAATATATTTAAAGGGTTTATTTAATTTAATCTTTTTACGTTTCTCCCCTTCTCTCTTTTTTCATTCCGTTTTCATTTGCCATGTGTGTTCTCTTATATGAGAACTCATATCATTTGTAAATTGTTCAATATAACTGAATCAT-GATTAGTTGTG]

[+] EMBL CD079454             [GGCGAAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTGAGACGTTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAGGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGATAAGGAAACTAAGATCACGCGCTTGAGT AATGGTCTTCGTGTGGCTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACTGTCAAGTAGCCAGAGATTTTATAGTCTATGCAGTATCTGGTTTCAACACAAATATGGATAAACTTACGCACATATTATCTGAAACAGTTCTTAGGGCAAAAATTACTCAGGAAGAGGTTGAAATGGCAGCTAAAAGTATTTCTTTTGAACTGGAAGCCTTGGAAAGATCACCACCAGTTGAACCAATTATGAATGAACTACTACATGTG GCTGCTTATAANAATAACACACTTGGCTTGCCAAAGTATTGCCCTAAACAGAATTTAAATAANAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD189857             [  CGAAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTGAGACGTTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAGGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGATAAGGAAACTAAGATCACGCGCTTGAGT AATGGTCTTCGTGTGGCTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD190748             [                                                                 TTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAGGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGATAAGGAAACTAAGATCACGCGCTTGAGT AATGGTCTTCGTGTGGCTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATACGCAGATCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD195967             [                                                                                                                                                                                                             TGAGTCAATGGTCTTCGTGTGCTTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGAGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACTGTCAAGTAGCCAGAGATTTTATAGTCTATGCAGTATCTGGTTTCAACACAAATATGGATAAACTTACGCACATATTATCTGAAACAGTTCTTAGGGCAAAAATTACTCAGGAAGAGGTTGAAATGGCAGCTAAAAGTATTTCTTTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD195920             [                                                                                                                                                                                                                              TGTGGCTTCTCAAAACAANCTTTGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTNCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACTGTCAAGTAGCCAGAGATTTTATAGTCTATGCAGTATCTGGTTTCAACACAAATATGGATAAACTTACGCACATATTATCTGAAACAGTTCTTAGGGCAAAAATTACTCAGGAAGAGGTTGAAATGGCAGCTAAAAGTATTTCTTTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD195919             [                                                                                                                                                                                                                                                                                                              TTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACTGTCAAGTAGCCAGAGATTTTATAGTCTATGCAGTATCTGGTTTCAACACAAATATGGATAAACTTACGCACATATTATCTGAAACAGTTCTTAGGGCAAAAATTACTCAGGAAGAGGTTGAAATGGCAGCTAAAAGTATTTCTTTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD079461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTACATGTGTGCTGCTTATAAAAATAACACACTTGGCTTGCC AAGTATTGCCCTAAACAGAATTTAAATAAAATTAATCGCGAAGATATCATCAAATTTGTTGCCGCTCAATTCAAACCAGAGAACATGGTGGTAGCTGGTGTAGGAATTGAACATGATGCACTAGTAAAGTCTGTAGAGAAATACTTTATTCCAACAGTGCCTAATGTATCTTACGAAAAGGCGGCTAGTGATGTGCCTTCACCTATCACTACTGTCTCCGAATATACAGGTGGTTATTATAAGTTAGAACGTGATTTATCACAATATCATGCACCAATGCCTGAATATGCTCATGTTGGTATCGGTTTTGAATCATGCAGTTATACAGATCCACAGTTCGTATCAGCTTGTGTACTTCATTCATTGCTTGGTGGAGGTGGATCTTTTTCAGCTGGTGGACCCGGCAAGGGTATGTATACTCGACTATATTTAAATATTTTAAATAAACACCATTGGGTTAATTCAGCACAGGCTGAAAATCATGCTTATGCTGATACAGGATTATTTACTGTTATTGGCAGTTCATTTCCAACTTATCTAGATCGTTTAGTCTATACTTTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD131968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAAATAACACACTTGGCTTGCCAAAGTATTGCCCTAAACAGAATTTAAATAAAATTAATCGCGAAGATATCATCAAATTTGTTGCCGCTCAATTCAAACCAGAGAACATGGTGGTAGCTGGTGTAGGAATTGAACATGATGCACTAGTAAAGTCTGTAGAGAAATACTTTACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD078612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTTGCCGCTCAATTCAAACCAGAGAACATGGTGGTAGCTGGTGTAGGAATTGAACATGATGCACTAGTAAAGTCTGTAGAGAAATACTTTATTCCAACAGTGCCTAATGTATCTTACGAAAAGGCGGCTAGTGATGTGCCTTCACCTATCACTACTGTCTCCGAATATACAGGTGGTTATTATAAGTTAGAACGTGATTTATCACAATATCATGCACCAATGCCTGAATATGCTCATGTTGGTATCGGTTTTGAATCATGCAGTTATACAGATCCACAGTTCGTATCAGCTTGTGTACTTCATTCATTGCTTGGTGGAGGTGGATCTTTTTCAGCTGGTGGACCCGGCAAGGGTATGTATACTCGACTATATTTAAATATTTTAAATAAACACCATTGGGTTAATTCAGCACAGGCTGAAAATCATGCTTATGCTGATACAGGATTATTTACTGTTATTGGCAGTTCATTTCCAACTTATCTAGATCGTTTAGTCTATACTTTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGCTAAACATCAGTTGAAATCTATGCTTCTAATGAATTTAGAAACTCGTGCTGTTTG TTTTG AGATATCGCTCGTCAAGTGCTTACATCTGATA                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD073725             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCTGAAAATCATGCTTATGCTGATACAGGATTATTTACTGTTATTGGCAGTTCATTTCCAACTTATCTAGATCGTTTAGTCTATACTTTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGCTAAACATCAGTTGAAATCTATGCTTTTAATGAATTTAGAAACTCGTGCTGTTTG TTTTGAAGATATCGCTCGTCAAGTGCTTACATTTGATATGAAACGTGAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAGTGATCTTCATGAACTTCTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGATACTATTTCTCTGTTAAATAGCGAATCATATAAAGAGAGGAAATCAAAGTCAAGAACCATTTTTAATATATTTAAAGGGTTTATTTAATTTAATCTTTTTACGTTTCTCCCCTTCTCTCTTTTTTCATTCCGTTTTCATTTGCCATGTGTGTTCTCTTATATGAGAACTCATATCATTTGTAGATTGTTCAATATAACTGAATCAT GATTAGTTGTG]
[-] EMBL CD073732             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TATGGTGATACAGGATTATTTACTGTTATTGGCAGTTCATTTCCAACTTATTTAGATCGTTTAGTTTATACCTTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGTTAAACATCAGTTGAAATCTATGCTTCTAATGAATTTAAAAACTCGTGCTGTTTGTTTTTA AGATATCGCTCGTCAAGTGGTTACATTTGATATGAAACGTGAACCAGAATATTGGGTTGATCTAATAGTCAAAATAACAGAAAGTGATCTTCATGAACTTTTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGATACTATTTTTTTGTTAAATAGCGAATCATATAAAGAGAGGAAATCAAAATCAAGAACCCTTTTTAATATATTTAAAGGGTTTATTTAATTTAATCTTTTTACGTTTTTCCCCTTCTTTTTTTTTTCATTCCGTTTTCATTTGCCAAGTGTGTTTTTTTATATGAGAACTCATATCATTTGTAAATTGGGCTATATAACTGAATCCTAGA TAGTTGTG]
[-] EMBL CD073076             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGGATTATTTACTGTTATTGGCAGTTCATTTCCAACTTATCTAGATCGTTTAGTCTATACTTTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGCTAAACATCAGTTGAAATCTATGCTTCTAATGAATTTAGAAACTCGTGCTGTTTG TTTTGAAGATATCGCTCGTCAAGTGCTTACATCTGATATGAAACGTGAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAGTGATCTTCATGAACTTCTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGATACTATTTCTCTGTTAAATAGCGAATCATATAAAGAGAGGAAATCAAAGTCAAGAACCATTTCTAATATATTTAAAGGGTTTATTTAATTTAATCTTTTTACGTTTCTCCCCTTCTCTCTTTTTTCATTCCGTTTTCATTTGCCATGTGTGTTCTCTTATATGAGAACTCATATCATTTGTAAATTGTTCAATATAACTGAATCAT GAT        ]
[-] EMBL AI975558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGCTAAACATCAGTTGAAATCTATGCTTCTAATGAATTTAGAAACTCGTGCTGTTTG TTTTGAAGATATCGCTCGTCAAGTGCTTACATCTGATATGAAACGTGAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAGTGATCTTCATGAACTTCTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGATACTATTTCTCTGTTAAATAGCGAATCATATAAAGAGAGGAAATCAAAGTCAAGAACCATTTCTAATATATTTAAAGGGTTTATTTAATTTAATCTTTTTACGTTTCTCCCCTTCTCTCTTTTTTCATTCCGTTTTCATTTGCCATGTGTGTTCTCTTATATGAGAACTCATATCATTTGTAAATTGTTCAATATAACTGAATCAT GATTAGTTGTG]




>consensus_10387#0
GGCGAAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTG
AGACGTTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAG
GTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAG
GATAAGGAAACTAAGATCACGCGCTTGAGTAATGGTCTTCGTGTGGCTTCTCAAAACAAA
CTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAAT
TTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACTCATCTGACCTATAC
GCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACTGTCAA
GTAGCCAGAGATTTTATAGTCTATGCAGTATCTGGTTTCAACACAAATATGGATAAACTT
ACGCACATATTATCTGAAACAGTTCTTAGGGCAAAAATTACTCAGGAAGAGGTTGAAATG
GCAGCTAAAAGTATTTCTTTTGAACTGGAAGCCTTGGAAAGATCACCACCAGTTGAACCA
ATTATGAATGAACTACTACATGTGGCTGCTTATAAAAATAACACACTTGGCTTGCCAAAG
TATTGCCCTAAACAGAATTTAAATAAAATTAATCGCGAAGATATCATCAAATTTGTTGCC
GCTCAATTCAAACCAGAGAACATGGTGGTAGCTGGTGTAGGAATTGAACATGATGCACTA
GTAAAGTCTGTAGAGAAATACTTTATTCCAACAGTGCCTAATGTATCTTACGAAAAGGCG
GCTAGTGATGTGCCTTCACCTATCACTACTGTCTCCGAATATACAGGTGGTTATTATAAG
TTAGAACGTGATTTATCACAATATCATGCACCAATGCCTGAATATGCTCATGTTGGTATC
GGTTTTGAATCATGCAGTTATACAGATCCACAGTTCGTATCAGCTTGTGTACTTCATTCA
TTGCTTGGTGGAGGTGGATCTTTTTCAGCTGGTGGACCCGGCAAGGGTATGTATACTCGA
CTATATTTAAATATTTTAAATAAACACCATTGGGTTAATTCAGCACAGGCTGAAAATCAT
GCTTATGCTGATACAGGATTATTTACTGTTATTGGCAGTTCATTTCCAACTTATCTAGAT
CGTTTAGTCTATACTTTGGTTGAGGAACTGCATCATACTATATCATCCTCAATATCACAT
GAAGAGTTGTCAAGGGCTAAACATCAGTTGAAATCTATGCTTCTAATGAATTTAGAAACT
CGTGCTGTTTGTTTTGAGATATCGCTCGTCAAGTGCTTACATCTGATATGAAACGTGAAC
CAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAGTGATCTTCATGAACTTCTTC
ATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTAC
CATCACTTGAAGATACTATTTCTCTGTTAAATAGCGAATCATATAAAGAGAGGAAATCAA
AGTCAAGAACCATTTTTAATATATTTAAAGGGTTTATTTAATTTAATCTTTTTACGTTTC
TCCCCTTCTCTCTTTTTTCATTCCGTTTTCATTTGCCATGTGTGTTCTCTTATATGAGAA
CTCATATCATTTGTAAATTGTTCAATATAACTGAATCATGATTAGTTGTG

consensusID : consensus_10387#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 442
fasta sequence

                              [GGAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTGAGACGTTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAGGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGATAAGGAAACTAAGATCACGCGCTTGAGTAATGGTCTTCGTGTGGCTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACGTTAGTCCTCCTTTTATGTTCTATTTCTAGTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACT]

[-] EMBL CD189679             [GGAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTGAGACGTTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAGGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGATAAGGAAACTAAGATCACGCGCTTGAGTAATGGTCTTCGTGTGGCTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACGTTAGTCCTCCTTTTATGTTCTATTTCTAGTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAAAATTGTAACTCAATTTTTGACT]
[+] EMBL CD130376             [                                                                                                        AGATATCACAAAGGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGATAAGGAAGCTAAGATCACGCGCTTGAGTAATGGTCTTCGTGTGGCTTCTCAAAACAAACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTA                                                                                                             ]




>consensus_10387#1
GGAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTGAGA
CGTTATGCTAGGTATTTCTCTTCAAGCATCCAAAGAAGCCAGCTAGATATCACAAAGGTT
TCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGAGGAT
AAGGAAACTAAGATCACGCGCTTGAGTAATGGTCTTCGTGTGGCTTCTCAAAACAAACTT
GGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAATTTT
GTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACGTTAGTCCTCCTTTTATG
TTCTATTTCTAGTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCATGGAA
AATTGTAACTCAATTTTTGACT

consensusID : consensus_10387#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 387
fasta sequence

                              [CTAATGAATTTAGAAACTCGTGCTGTTTGTNTTGAAGATATCGCTCGNCAAGTGCTTACATCTGATATGAAACGTGCAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAGTGANCTTCATGAAACTTCTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGGATACTATTTCTCTGTTAAATAGCGANTCATATAAAGAGAGGAAATCAAAGTCAAGCANCCATCTCTAATATATTTANAGGGTTNATTTACNTTAATCTTTTTNACGGNTTTTCCCCCTTCTCTCTTTTTCATTCCCGCCCTCATTTGGTCATGTGTGCTTCTTCTTTATATGA]

[+] EMBL SM6941               [CTAATGAATTTAGAAACTCGTGCTGTTTGTNTTGAAGATATCGCTCGNCAAGTGCTTACATCTGATATGAAACGTGCAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAGTGANCTTCATGAAACTTCTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGGATACTATTTCTCTGTTAAATAGCGANTCATATAAAGAGAGGAAATCAAAGTCAAGCANCCATCTCTAATATATTTANAGGGTTNATTTACNTTAATCTTTTTNACGGNTTTTCCCCCTTCTCTCTTTTTCATTCCCGCCCTCATTTGGTCATGTGTGCTTCTTCTTTATATGA]




>consensus_10387#2
CTAATGAATTTAGAAACTCGTGCTGTTTGTNTTGAAGATATCGCTCGNCAAGTGCTTACA
TCTGATATGAAACGTGCAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAAG
TGANCTTCATGAAACTTCTTCATCGTATGATTCATCGATGTAAACCAACATTAGTCGGTT
TTGGACGAGTTGATAAACTACCATCACTTGAAGGATACTATTTCTCTGTTAAATAGCGAN
TCATATAAAGAGAGGAAATCAAAGTCAAGCANCCATCTCTAATATATTTANAGGGTTNAT
TTACNTTAATCTTTTTNACGGNTTTTCCCCCTTCTCTCTTTTTCATTCCCGCCCTCATTT
GGTCATGTGTGCTTCTTCTTTATATGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10387#0      GGCGAAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTG 60
consensus_10387#1      ---GGAAATTTGAAAGTGTGTGACTTGCTTCGCCGGGACATGCGTTCAGCTTCTTGTTTG 57
consensus_10387#2      CTAATGAATTTAGAAACTCGTGCTGTTTGTNTTGAAGATAT-CGCTCGNCAAGTGCTTAC 59
                             *****  **    ***   *   *      ** ** ** **  *   *  **  

consensus_10387#0      AGACGTTATGCTAGGTATTTCTCTTCAAGCAT-CCAAAGAAGCCAGCTAGATATCACAAA 119
consensus_10387#1      AGACGTTATGCTAGGTATTTCTCTTCAAGCAT-CCAAAGAAGCCAGCTAGATATCACAAA 116
consensus_10387#2      ATCTGATATGAAACGTGCAACCAGAATATTGGGTTGATCAAATAGACAAAATAACAGAAA 119
                       *   * ****  * **    *      *        *  **     * * *** ** ***

consensus_10387#0      GGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGA 179
consensus_10387#1      GGTTTCATTAAAGGATGTGATCAATCAAGGGTTTAGTAATCACTCGAAAACATTCACTGA 176
consensus_10387#2      GTGANCTTCATGAAACTTCTTCATCGTATGATTCATCGAT-GTAAACCAACATTAGTCGG 178
                       *    * * *    *  *  ***    * * ** *   **        ******    * 

consensus_10387#0      GGATAAGGAAACTAAGATCACGCGCTTGAGTAATGGTCTTCGTGTGGCTTCTCAAAACAA 239
consensus_10387#1      GGATAAGGAAACTAAGATCACGCGCTTGAGTAATGGTCTTCGTGTGGCTTCTCAAAACAA 236
consensus_10387#2      TTTTGGACGAGTTGATAAACTACCATCACTTGAAGG-----ATACTATTTCTCTG----- 228
                          *     *  * * *     *  *    * * **      *     *****       

consensus_10387#0      ACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAA 299
consensus_10387#1      ACTTGGTAGCCAGTGTGCAATAGGAGTTATTATTAAGGCTGGTCCTCGATACGAGGGGAA 296
consensus_10387#2      -TTAAATAGCGANT-CATATAAAGAGAGGAAATCAAAGTCAAGCANCCATCTCTAATATA 286
                         *   **** * *    *  * ***     ** ** *     *  * **         *

consensus_10387#0      TTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCAC-------------- 345
consensus_10387#1      TTTTGTCAGCGGGACTTCTCACTATCTTGAGAAACTAGGATTCCACGTTAGTCCTCCTTT 356
consensus_10387#2      TTTA--NAGGGTTNATTTACNTTAATCTTTTTNACGGNTTTTCCCCCT---TCTCTCTTT 341
                       ***    ** *    **  *  **   *     **     **** *              

consensus_10387#0      ----------------TCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCAT 389
consensus_10387#1      TATGTTCTATTTCTAGTCATCTGACCTATACGCAGATCGAAATTCTTTTCAGGAAGCCAT 416
consensus_10387#2      TTCATTCCCGCCC---TCATTTGGTC-ATGTGTGCTTC----TTCTTTATATGA------ 387
                                       **** **  * **  *    **    ******  * **      

consensus_10387#0      GGAAAATTGTAACTCAATTTTTGACTGTCAAGTAGCCAGAGATTTTATAGTCTATGCAGT 449
consensus_10387#1      GGAAAATTGTAACTCAATTTTTGACT---------------------------------- 442
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      ATCTGGTTTCAACACAAATATGGATAAACTTACGCACATATTATCTGAAACAGTTCTTAG 509
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      GGCAAAAATTACTCAGGAAGAGGTTGAAATGGCAGCTAAAAGTATTTCTTTTGAACTGGA 569
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      AGCCTTGGAAAGATCACCACCAGTTGAACCAATTATGAATGAACTACTACATGTGGCTGC 629
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      TTATAAAAATAACACACTTGGCTTGCCAAAGTATTGCCCTAAACAGAATTTAAATAAAAT 689
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      TAATCGCGAAGATATCATCAAATTTGTTGCCGCTCAATTCAAACCAGAGAACATGGTGGT 749
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      AGCTGGTGTAGGAATTGAACATGATGCACTAGTAAAGTCTGTAGAGAAATACTTTATTCC 809
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      AACAGTGCCTAATGTATCTTACGAAAAGGCGGCTAGTGATGTGCCTTCACCTATCACTAC 869
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      TGTCTCCGAATATACAGGTGGTTATTATAAGTTAGAACGTGATTTATCACAATATCATGC 929
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      ACCAATGCCTGAATATGCTCATGTTGGTATCGGTTTTGAATCATGCAGTTATACAGATCC 989
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      ACAGTTCGTATCAGCTTGTGTACTTCATTCATTGCTTGGTGGAGGTGGATCTTTTTCAGC 1049
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      TGGTGGACCCGGCAAGGGTATGTATACTCGACTATATTTAAATATTTTAAATAAACACCA 1109
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      TTGGGTTAATTCAGCACAGGCTGAAAATCATGCTTATGCTGATACAGGATTATTTACTGT 1169
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      TATTGGCAGTTCATTTCCAACTTATCTAGATCGTTTAGTCTATACTTTGGTTGAGGAACT 1229
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      GCATCATACTATATCATCCTCAATATCACATGAAGAGTTGTCAAGGGCTAAACATCAGTT 1289
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      GAAATCTATGCTTCTAATGAATTTAGAAACTCGTGCTGTTTGTTTTGAGATATCGCTCGT 1349
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      CAAGTGCTTACATCTGATATGAAACGTGAACCAGAATATTGGGTTGATCAAATAGACAAA 1409
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      ATAACAGAAAGTGATCTTCATGAACTTCTTCATCGTATGATTCATCGATGTAAACCAACA 1469
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      TTAGTCGGTTTTGGACGAGTTGATAAACTACCATCACTTGAAGATACTATTTCTCTGTTA 1529
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      AATAGCGAATCATATAAAGAGAGGAAATCAAAGTCAAGAACCATTTTTAATATATTTAAA 1589
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      GGGTTTATTTAATTTAATCTTTTTACGTTTCTCCCCTTCTCTCTTTTTTCATTCCGTTTT 1649
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      CATTTGCCATGTGTGTTCTCTTATATGAGAACTCATATCATTTGTAAATTGTTCAATATA 1709
consensus_10387#1      ------------------------------------------------------------
consensus_10387#2      ------------------------------------------------------------
                                                                                   

consensus_10387#0      ACTGAATCATGATTAGTTGTG 1730
consensus_10387#1      ---------------------
consensus_10387#2      ---------------------