cluster # 10412

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Schistosoma mansoni
cluster # 10412 cluster # 10412 Sequences # 16 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10412#0 length = 890 sequences # 9
consensus_10412#1 length = 628 sequences # 2
consensus_10412#2 length = 578 sequences # 1

consensus_10412#3 length = 548 sequences # 1
consensus_10412#4 length = 519 sequences # 1
consensus_10412#5 length = 445 sequences # 1
consensus_10412#6 length = 212 sequences # 1

consensusID : consensus_10412#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 890
fasta sequence

                              [CAAGTAAAGTATGAGCTAGTGAAAAAGAAAACATGCTTCTTATACCTACGTTTCAAAGGGGATAAAATCGCAAGAATAATTAATCACAGACTTAATTCTGCGTTAGAAGCGACCTACCCAGCAGCTAAACTGACAGCGGTGTGGGAAACTAACTACTCACTCAAACAAGCTAAAATCGACAAGTCCTCTTTTCTCAGTAGCTCCAACTGCATTTACCAATTTACATGTACGTGCCGAAGCACATACATTGGAAGAACCGAGAAAAGAGTACTTGTTCGCATTTCTGAGCATGTTCCTAAGAAACTGAGGCTGCGAGGGACGAGGGCTCTCAACAGTGCGATAGCTCGGCATTTACTCGACACCAGGCACACCATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTTATCTTATCTGTCTCGTGTGTGCCTCAAAATCGAATTNCCCGCGACACACCATGGCGGCN]

[+] EMBL CD199951             [CAAGTAAAGTATGAGCTAGTGAAAAAGAAAACATGCTTCTTATACCTACGTTTCAAAGGGGATAAAATCGCAAGAATAATTAATCACAGACTTAATTCTGCGTTAGAAGCGACCTACCCAGCAGCTAAACTGACAGCGGTGTGGGAAACTAACTACTCACTCAAACAAGCTAAAATCGACAAGTCCTCTTTTCTCAGTAGCTCCAACTGCATTTACCAATTTACATGTACGTGCCGAAGCACATACATTGGAAGAACCGAGAAAAGAGTACTTGTTCGCATTTCTGAGCATGTTCCTAAGAAACTGAGGCTGCGAGGGACGAGGGCTCTCAACAGTGCGATAGCTCGGCATTTACTCGACACCAGGCACACCATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAGACGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD125295             [                                                                                                                                                                                                                                                                                                                                                                                   CATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCCTTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTT                                                            ]
[+] EMBL CD125313             [                                                                                                                                                                                                                                                                                                                                                                                   CATTGACATTTCTCATGCCTTCAAAAACATTAGCAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTT                                                                                                                                                                                                                                                               ]
[+] EMBL CD125275             [                                                                                                                                                                                                                                                                                                                                                                                   CATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACGAAGAAGTACAACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTn                                                            ]
[-] EMBL CD125345             [                                                                                                                                                                                                                                                                                                                                                                                    ATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTTTTTATATTAGTTTTACTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTATCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTTATCTTATCTGTCTCGTGTGTGCCTCAAAATCGAATTNCCCGCGACACACCATGGCGGCN]
[-] EMBL CD125315             [                                                                                                                                                                                                                                                                                                                                                                                    ATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGACAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCTAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTT                                                           ]
[-] EMBL CD125324             [                                                                                                                                                                                                                                                                                                                                                                                    ATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTCTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGGTTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTT                                                           ]
[-] EMBL CD125223             [                                                                                                                                                                                                                                                                                                                                                                                    ATAGACATTTCTCATGCCTTCTAAATCATTAGCAAACAAAGAAGTACAACTGCACTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGATACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTT                                                           ]
[-] EMBL CD125242             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAAAACTGAAACCGGATCTACGTACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTTTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTACCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATTCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGCGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTT                                                           ]




>consensus_10412#0
CAAGTAAAGTATGAGCTAGTGAAAAAGAAAACATGCTTCTTATACCTACGTTTCAAAGGG
GATAAAATCGCAAGAATAATTAATCACAGACTTAATTCTGCGTTAGAAGCGACCTACCCA
GCAGCTAAACTGACAGCGGTGTGGGAAACTAACTACTCACTCAAACAAGCTAAAATCGAC
AAGTCCTCTTTTCTCAGTAGCTCCAACTGCATTTACCAATTTACATGTACGTGCCGAAGC
ACATACATTGGAAGAACCGAGAAAAGAGTACTTGTTCGCATTTCTGAGCATGTTCCTAAG
AAACTGAGGCTGCGAGGGACGAGGGCTCTCAACAGTGCGATAGCTCGGCATTTACTCGAC
ACCAGGCACACCATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAAAGAAGTACA
ACTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTAC
TCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTT
TTTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTA
CCCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTAT
ATGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGAT
TCTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTG
CGTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTTATCTTATCT
GTCTCGTGTGTGCCTCAAAATCGAATTNCCCGCGACACACCATGGCGGCN

consensusID : consensus_10412#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 628
fasta sequence

                              [NCAATGAGTGTCTGAGGAAGAAATGATNTTAATCACCAAATGCCTACGTGAAAATGCATATCCAGAGAAATTCATCCACAAATATGCAAACACCAACCGTCGAATAAAGTATGATCGAGTTGAAAAGAAAACATGCTTCCTATACCTACGTTTCAAAGGGGACGAAATCGCTGGAATAATTAATCACAGACTTAATTCCGCGTTGAAAGTGACCTACCCAGCAGCTAAACTGACAACGGTGTGGGAAACAAACTGCTCACTCAAACAAACTAAAATCGACAATTCCTCTTTTCTCAGTAGCTCCAACTGCATTTACCAATTTACATGTACGTGCCAAAGCACATACATTGAAAGAACTGAGAGAAGAGTGCATGTCCGCATTTCTGAGCATGTTCCTAAGAAACTGAGGCTGCAAGGGTCCAGGGCTCTCAACAGTGCGATAGCTCGGCATTTACTCGACACCGGGCACAGCATTGACATTTCTCATGCCTTTAAAATCATTAGTAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGAAGCGATCGCGATAAAAAAACTCAAACCGGATCTGTGCACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTTTT]

[-] EMBL CD198106             [NCAATGAGTGTCTGAGGAAGAAATGATNTTAATCACCAAATGCCTACGTGAAAATGCATATCCAGAGAAATTCATCCACAAATATGCAAACACCAACCGTCGAATAAAGTATGATCGAGTTGAAAAGAAAACATGCTTCCTATACCTACGTTTCAAAGGGGACGAAATCGCTGGAATAATTAATCACAGACTTAATTCCGCGTTGAAAGTGACCTACCCAGCAGCTAAACTGACAACGGTGTGGGAAACAAACTGCTCACTCAAACAAACTAAAATCGACAATTCCTCTTTTCTCAGTAGCTCCAACTGCATTTACCAATTTACATGTACGTGCCAAAGCACATACATTGAAAGAACTGAGAGAAGAGTGCATGTCCGCATTTCTGAGCATGTTCCTAAGAAACTGAGGCTGCAAGGGTCCAGGGCTCTCAACAGTGCGATAGCTCGGCATTTACTCGACACCGGGCACAGCATTGACATTTCTCATGCCTTTAAAATCATTAGTAAACAAAGAAGTACAACTGCTCTCCGG                                                                                                ]
[+] EMBL CD171549             [                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGGGCTCTCAACAGTGCGATACCTCGGCATTTATTCGACACCGGGCACAGCATTGACATTTCTCATGCCTTTAAAATCATTAGTAAACAAAGAAGTACAACTGCTCTCCAGTTTGCTGAAGCGATCGCGATAAAAAAACTCAAACCGGATCTGTGCACTCAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTTTT]




>consensus_10412#1
NCAATGAGTGTCTGAGGAAGAAATGATNTTAATCACCAAATGCCTACGTGAAAATGCATA
TCCAGAGAAATTCATCCACAAATATGCAAACACCAACCGTCGAATAAAGTATGATCGAGT
TGAAAAGAAAACATGCTTCCTATACCTACGTTTCAAAGGGGACGAAATCGCTGGAATAAT
TAATCACAGACTTAATTCCGCGTTGAAAGTGACCTACCCAGCAGCTAAACTGACAACGGT
GTGGGAAACAAACTGCTCACTCAAACAAACTAAAATCGACAATTCCTCTTTTCTCAGTAG
CTCCAACTGCATTTACCAATTTACATGTACGTGCCAAAGCACATACATTGAAAGAACTGA
GAGAAGAGTGCATGTCCGCATTTCTGAGCATGTTCCTAAGAAACTGAGGCTGCAAGGGTC
CAGGGCTCTCAACAGTGCGATAGCTCGGCATTTACTCGACACCGGGCACAGCATTGACAT
TTCTCATGCCTTTAAAATCATTAGTAAACAAAGAAGTACAACTGCTCTCCGGTTTGCTGA
AGCGATCGCGATAAAAAAACTCAAACCGGATCTGTGCACTCAAAAAGAGACAGTGATAAA
CTTATTACTACCCTGGTAATCCTTTTTT

consensusID : consensus_10412#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 578
fasta sequence

                              [CAGGAAACACTAAGAGGCATTTTAGCCAATCAGCGTTCAGTAGAAGTTATGCTAGAAACATCGCAAAAGTGATAAGTCATATGTAGAGTTTCTGATTGGCTGATTACTACTACACTGCTACTATGTTTAGTAGGATTCCAGAATTTCCCGGGAAAACCCTAGGACTTCTAAAATACTATAAAAACCCTATATTTTCTGTACATAAATAAATCTTTAGAGTAAAGTACTTCTCGCATATTTTGCGCCTTTTCTCTCGTGTTCAAGTCGTTGTGTAGATAATGCTTGGGGGCTATGAGACTAGCTTAAAATCCGAGTATAGTGTTCAATTAGCAAGATTTATCATACTGTTGAGGAGTCGCATAATGAGACAAAGAGGCCATTCAGTATTTCCAGGTTTAAGTTCCTTGCTTTTCTTAAAAACAGATGGATAAAACAATGTTTTATGAACATATTTAATTAGTAAACAAGTTTATTGTTGTATACGTGTATGGAGTCCATGAATTTACAGTTATATGAATATCAATTGATAGATCTTTAATATTGTTAATTTTTGGTAAAAAACGACTGTTTATTANGGG]

[+] EMBL CD127485             [CAGGAAACACTAAGAGGCATTTTAGCCAATCAGCGTTCAGTAGAAGTTATGCTAGAAACATCGCAAAAGTGATAAGTCATATGTAGAGTTTCTGATTGGCTGATTACTACTACACTGCTACTATGTTTAGTAGGATTCCAGAATTTCCCGGGAAAACCCTAGGACTTCTAAAATACTATAAAAACCCTATATTTTCTGTACATAAATAAATCTTTAGAGTAAAGTACTTCTCGCATATTTTGCGCCTTTTCTCTCGTGTTCAAGTCGTTGTGTAGATAATGCTTGGGGGCTATGAGACTAGCTTAAAATCCGAGTATAGTGTTCAATTAGCAAGATTTATCATACTGTTGAGGAGTCGCATAATGAGACAAAGAGGCCATTCAGTATTTCCAGGTTTAAGTTCCTTGCTTTTCTTAAAAACAGATGGATAAAACAATGTTTTATGAACATATTTAATTAGTAAACAAGTTTATTGTTGTATACGTGTATGGAGTCCATGAATTTACAGTTATATGAATATCAATTGATAGATCTTTAATATTGTTAATTTTTGGTAAAAAACGACTGTTTATTANGGG]




>consensus_10412#2
CAGGAAACACTAAGAGGCATTTTAGCCAATCAGCGTTCAGTAGAAGTTATGCTAGAAACA
TCGCAAAAGTGATAAGTCATATGTAGAGTTTCTGATTGGCTGATTACTACTACACTGCTA
CTATGTTTAGTAGGATTCCAGAATTTCCCGGGAAAACCCTAGGACTTCTAAAATACTATA
AAAACCCTATATTTTCTGTACATAAATAAATCTTTAGAGTAAAGTACTTCTCGCATATTT
TGCGCCTTTTCTCTCGTGTTCAAGTCGTTGTGTAGATAATGCTTGGGGGCTATGAGACTA
GCTTAAAATCCGAGTATAGTGTTCAATTAGCAAGATTTATCATACTGTTGAGGAGTCGCA
TAATGAGACAAAGAGGCCATTCAGTATTTCCAGGTTTAAGTTCCTTGCTTTTCTTAAAAA
CAGATGGATAAAACAATGTTTTATGAACATATTTAATTAGTAAACAAGTTTATTGTTGTA
TACGTGTATGGAGTCCATGAATTTACAGTTATATGAATATCAATTGATAGATCTTTAATA
TTGTTAATTTTTGGTAAAAAACGACTGTTTATTANGGG

consensusID : consensus_10412#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 548
fasta sequence

                              [CTATGCGAATCATTTATTTCAAACATATCAGCCAAACAGACCGTATCACACCATAAAATAGGAAATAGCATTTACACAAGATAAAGCCAAAAAGTGGCTGTGAACTTGGGAGACTGTAACTAATAAACTGAGCATAAATTAAGAATGGTAAATCGTATAATAATAGTCTATAGGTCAAAATGAAGCTTATAATAAGAGGAATATAGATATACATAATCTAGTTACTGAATAGTTATACAATAGGAATATGTATATGATATTAGTCCATTAATAGTTCTCAAAAGTTACCCGTAATTTAATCTTCACTAGAATATAACAAATAGTATTAAAAATCCATAGACGAATACAAAATCAAGAATCAGGTCAAAGGAAAGAGATAGACATAATGAATATGTAGAAAACAACAAGTTAAAGGCTAAAAATAACCAATTAAGATCAAAGTCAACTGAACAAACTGAGTCATATGTGGAGAAATCTGAATATCCCACTTCTACCTAGCATTTGTATTGATGGTGTTGTTCAGAGGAACAATCATATTTTCACGACTA]

[+] EMBL CD185794             [CTATGCGAATCATTTATTTCAAACATATCAGCCAAACAGACCGTATCACACCATAAAATAGGAAATAGCATTTACACAAGATAAAGCCAAAAAGTGGCTGTGAACTTGGGAGACTGTAACTAATAAACTGAGCATAAATTAAGAATGGTAAATCGTATAATAATAGTCTATAGGTCAAAATGAAGCTTATAATAAGAGGAATATAGATATACATAATCTAGTTACTGAATAGTTATACAATAGGAATATGTATATGATATTAGTCCATTAATAGTTCTCAAAAGTTACCCGTAATTTAATCTTCACTAGAATATAACAAATAGTATTAAAAATCCATAGACGAATACAAAATCAAGAATCAGGTCAAAGGAAAGAGATAGACATAATGAATATGTAGAAAACAACAAGTTAAAGGCTAAAAATAACCAATTAAGATCAAAGTCAACTGAACAAACTGAGTCATATGTGGAGAAATCTGAATATCCCACTTCTACCTAGCATTTGTATTGATGGTGTTGTTCAGAGGAACAATCATATTTTCACGACTA]




>consensus_10412#3
CTATGCGAATCATTTATTTCAAACATATCAGCCAAACAGACCGTATCACACCATAAAATA
GGAAATAGCATTTACACAAGATAAAGCCAAAAAGTGGCTGTGAACTTGGGAGACTGTAAC
TAATAAACTGAGCATAAATTAAGAATGGTAAATCGTATAATAATAGTCTATAGGTCAAAA
TGAAGCTTATAATAAGAGGAATATAGATATACATAATCTAGTTACTGAATAGTTATACAA
TAGGAATATGTATATGATATTAGTCCATTAATAGTTCTCAAAAGTTACCCGTAATTTAAT
CTTCACTAGAATATAACAAATAGTATTAAAAATCCATAGACGAATACAAAATCAAGAATC
AGGTCAAAGGAAAGAGATAGACATAATGAATATGTAGAAAACAACAAGTTAAAGGCTAAA
AATAACCAATTAAGATCAAAGTCAACTGAACAAACTGAGTCATATGTGGAGAAATCTGAA
TATCCCACTTCTACCTAGCATTTGTATTGATGGTGTTGTTCAGAGGAACAATCATATTTT
CACGACTA

consensusID : consensus_10412#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 519
fasta sequence

                              [TCATTCATTATTGGATGATTTGAAAGAGTTGATTGATGAGCAATAGTTCATTTTTCGATTGTTTAATCAGTCATATGATAGAGTGTATTTTTAAATGTTGATGGTGATGGACAAACATTCGATTGTTCAACATCTCAAGAGTGTCCTGTTGACATGTAAAACAATTCAATAGATCAACACATTCGAATCGTTTTTTTATTGTTATGCAGAGATATCGAGAGAAGTTTCACATTGCTGTAAAACATCTTGTATGTAGTGTGGAAGAATGGATTTATTCATGGAATAGTACATTCAGATGTGATCATTTAAGGAAAACTACATCTGGTGAACAAGATCAGAATTTTAATAGAAATGTCAAGACAGGTCTACTGTATGGGGCGGAAACTTGCAGAACTACGAAAGCCATCATCCAGAAGATATAGGTCTTTATTAATAGTTGTCTACGCAAAATACTCCGAATCCATTGGTCAGACACTATCAGCAACATTCTACTGTGGGAGAGAACAAACAGACTACATT]

[+] EMBL CD201390             [TCATTCATTATTGGATGATTTGAAAGAGTTGATTGATGAGCAATAGTTCATTTTTCGATTGTTTAATCAGTCATATGATAGAGTGTATTTTTAAATGTTGATGGTGATGGACAAACATTCGATTGTTCAACATCTCAAGAGTGTCCTGTTGACATGTAAAACAATTCAATAGATCAACACATTCGAATCGTTTTTTTATTGTTATGCAGAGATATCGAGAGAAGTTTCACATTGCTGTAAAACATCTTGTATGTAGTGTGGAAGAATGGATTTATTCATGGAATAGTACATTCAGATGTGATCATTTAAGGAAAACTACATCTGGTGAACAAGATCAGAATTTTAATAGAAATGTCAAGACAGGTCTACTGTATGGGGCGGAAACTTGCAGAACTACGAAAGCCATCATCCAGAAGATATAGGTCTTTATTAATAGTTGTCTACGCAAAATACTCCGAATCCATTGGTCAGACACTATCAGCAACATTCTACTGTGGGAGAGAACAAACAGACTACATT]




>consensus_10412#4
TCATTCATTATTGGATGATTTGAAAGAGTTGATTGATGAGCAATAGTTCATTTTTCGATT
GTTTAATCAGTCATATGATAGAGTGTATTTTTAAATGTTGATGGTGATGGACAAACATTC
GATTGTTCAACATCTCAAGAGTGTCCTGTTGACATGTAAAACAATTCAATAGATCAACAC
ATTCGAATCGTTTTTTTATTGTTATGCAGAGATATCGAGAGAAGTTTCACATTGCTGTAA
AACATCTTGTATGTAGTGTGGAAGAATGGATTTATTCATGGAATAGTACATTCAGATGTG
ATCATTTAAGGAAAACTACATCTGGTGAACAAGATCAGAATTTTAATAGAAATGTCAAGA
CAGGTCTACTGTATGGGGCGGAAACTTGCAGAACTACGAAAGCCATCATCCAGAAGATAT
AGGTCTTTATTAATAGTTGTCTACGCAAAATACTCCGAATCCATTGGTCAGACACTATCA
GCAACATTCTACTGTGGGAGAGAACAAACAGACTACATT

consensusID : consensus_10412#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 445
fasta sequence

                              [TCTTTGCTAACAATGCTTGTGACTTTAGGCTATATCGAGGCAATACGCACAGTATGCACGTATGCCAATTCCAAACTGACCAGTTGCAGTCCTAACACATCAATGGAAAGATTCAAACAAACAATACCAAGTGAACTTTCATACATTGTTTTTACTTTAGCTAGTTCAGTCACATGTCAAAAATATATTATTAGCCTTACAAAGTAAATGTTTCGTTAATAAAATGACTTATTTGACTATAAGGCTGGGACACTTTACACTTTATATTTCTGATGTTTTCTTTTCATATCTGTGTATTCAAATGTTAGCAGATATGTTGTTGTTTCATAATTTTTACTGAAGTTTGTAATAGTAGACAGTATTTGAAGTCGGAGTAGATGGTGATACTAAAATTTTCTTATCACTGTATGAAAAAAAGAGAACTGAAATTAAATTGACAAATTCA]

[+] EMBL CD164875             [TCTTTGCTAACAATGCTTGTGACTTTAGGCTATATCGAGGCAATACGCACAGTATGCACGTATGCCAATTCCAAACTGACCAGTTGCAGTCCTAACACATCAATGGAAAGATTCAAACAAACAATACCAAGTGAACTTTCATACATTGTTTTTACTTTAGCTAGTTCAGTCACATGTCAAAAATATATTATTAGCCTTACAAAGTAAATGTTTCGTTAATAAAATGACTTATTTGACTATAAGGCTGGGACACTTTACACTTTATATTTCTGATGTTTTCTTTTCATATCTGTGTATTCAAATGTTAGCAGATATGTTGTTGTTTCATAATTTTTACTGAAGTTTGTAATAGTAGACAGTATTTGAAGTCGGAGTAGATGGTGATACTAAAATTTTCTTATCACTGTATGAAAAAAAGAGAACTGAAATTAAATTGACAAATTCA]




>consensus_10412#5
TCTTTGCTAACAATGCTTGTGACTTTAGGCTATATCGAGGCAATACGCACAGTATGCACG
TATGCCAATTCCAAACTGACCAGTTGCAGTCCTAACACATCAATGGAAAGATTCAAACAA
ACAATACCAAGTGAACTTTCATACATTGTTTTTACTTTAGCTAGTTCAGTCACATGTCAA
AAATATATTATTAGCCTTACAAAGTAAATGTTTCGTTAATAAAATGACTTATTTGACTAT
AAGGCTGGGACACTTTACACTTTATATTTCTGATGTTTTCTTTTCATATCTGTGTATTCA
AATGTTAGCAGATATGTTGTTGTTTCATAATTTTTACTGAAGTTTGTAATAGTAGACAGT
ATTTGAAGTCGGAGTAGATGGTGATACTAAAATTTTCTTATCACTGTATGAAAAAAAGAG
AACTGAAATTAAATTGACAAATTCA

consensusID : consensus_10412#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 212
fasta sequence

                              [CAATAGCAGTGATCTGATACGCCGTGAATCCCACCAAGACATAATTGCAGCATCAGCCGTTGTATTCTCTGTATTCTCTTAATATGCTTCTCTATGAGCATCGGATAGGTGACGATTACCAAAACTATCTACAGTGTGTAATACAATCGCTGGATGAGAATATGACGATGATATAACCCATATACAATGCCTAGTGAATAGTATTAATAGAA]

[+] EMBL CD113362             [CAATAGCAGTGATCTGATACGCCGTGAATCCCACCAAGACATAATTGCAGCATCAGCCGTTGTATTCTCTGTATTCTCTTAATATGCTTCTCTATGAGCATCGGATAGGTGACGATTACCAAAACTATCTACAGTGTGTAATACAATCGCTGGATGAGAATATGACGATGATATAACCCATATACAATGCCTAGTGAATAGTATTAATAGAA]




>consensus_10412#6
CAATAGCAGTGATCTGATACGCCGTGAATCCCACCAAGACATAATTGCAGCATCAGCCGT
TGTATTCTCTGTATTCTCTTAATATGCTTCTCTATGAGCATCGGATAGGTGACGATTACC
AAAACTATCTACAGTGTGTAATACAATCGCTGGATGAGAATATGACGATGATATAACCCA
TATACAATGCCTAGTGAATAGTATTAATAGAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10412#0      ------------------------------------------------------------
consensus_10412#1      NCAATGAGTGTCTGAGGAAGAAATGATNTTAATCACCAAATGCCTACGTGAAAATGCATA 60
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      ------------------------------------------------------------
consensus_10412#2      ------------------------------------------------------------
consensus_10412#4      ------------------------------------------------------------
                                                                                   

consensus_10412#0      ----------------------------------------CAAGTAAAGTATGAGCTAGT 20
consensus_10412#1      TCCAGAGAAATTCATCCACAAATATGCAAACACCAACCGTCGAATAAAGTATGATCGAGT 120
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      ------------------------------------------CTATGCGAATCATTTATT 18
consensus_10412#2      ------------------------------CAGGAAACACTAAGAGGCATTTTAGCCAAT 30
consensus_10412#4      -----------------------------------------TCATTCATTATTGGATGAT 19
                                                                                   

consensus_10412#0      GAAAAAGAAAACATGCTTCTTATACCTACGTTTCAAAGGGGATAAAATCGCAAGAATAAT 80
consensus_10412#1      TGAAAAGAAAACATGCTTCCTATACCTACGTTTCAAAGGGGACGAAATCGCTGGAATAAT 180
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------TCTTTGCTAACAATGCTTGTGACTTTAGGCTATATCGAGGCA 42
consensus_10412#3      TCAAACATATCAGCCAAACAGACCGTATCACACCATAAAATAGGAAATAGCATTTACACA 78
consensus_10412#2      CAGCGTTCAGTAGAAGTTATGCTAGAAACATCGCAAAAGTGAT-AAGTCATATGTAGAGT 89
consensus_10412#4      TTGAAAGAGTTGATTGATGAGCAATAGTTCATTTTTCGATTGTTTAATCAGTCATATGAT 79
                                                                                   

consensus_10412#0      TAATCACAGACTTAATTCTGCGTTAGAAGCGACCTACCCAGCAGCTAAACTGACAGCGGT 140
consensus_10412#1      TAATCACAGACTTAATTCCGCGTTGAAAGTGACCTACCCAGCAGCTAAACTGACAACGGT 240
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ATACGCACAGTATGCACGTATGCCAATTCCAAACTGACCAGTTGCAGTCCTAACACATCA 102
consensus_10412#3      AGATAAAGCCAAAAAGTGGCTGTGAACTTGGGAGACTGTAACTAATAAACTGAGCATAAA 138
consensus_10412#2      TTCTGATTGGCTGATTACTACTACACTGCTACTATGTTTAGTAGGATTCCAGAATTTCCC 149
consensus_10412#4      AGAGTGTATTTTTAAATGTTGATGGTGATGGACAAA--CATTCGATTGTTCAACATCTCA 137
                                                                                   

consensus_10412#0      GTGGGAAACTAACTACTCACTCAAACAAGCTA-AAATCGACA-----AGTCCTCTTTTCT 194
consensus_10412#1      GTGGGAAACAAACTGCTCACTCAAACAAACTA-AAATCGACA-----ATTCCTCTTTTCT 294
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ATGGAAAGATTCAAACAAACAATACCAAGTGA-ACTTTCATAC----ATTGTTTTTACTT 157
consensus_10412#3      TTAAGAATGGTAAATCGTATAATAATAGTCTATAGGTCAAAAT----GAAGCTTATAATA 194
consensus_10412#2      GGGAAAACCCTAGGACTTCTAAAATACTATAAAAACCCTATA----------TTTTCTGT 199
consensus_10412#4      AGAGTGTCCTGTTGACATGTAAAACAATTCAATAGATCAACACATTCGAATCGTTTTTTT 197
                                                                                   

consensus_10412#0      CAGTAGCTCCAACTGCAT-TTACCAATTTACATGTACGTGCCGA--AGCACATACATTGG 251
consensus_10412#1      CAGTAGCTCCAACTGCAT-TTACCAATTTACATGTACGTGCCAA--AGCACATACATTGA 351
consensus_10412#6      ---------CAATAGCAG-TGATCTGATACGCCGTGAATCCCACC-AAGACATA-ATTGC 48
consensus_10412#5      TAGCTAGTTCAGTCACAT-GTCAAAAATATATTATTAGCCTTACAAAGTAAATGTTTCGT 216
consensus_10412#3      AGAGGAATATAGATATACATAATCTAGTTACTGAATAGTTATACAATAGGAATATGTATA 254
consensus_10412#2      ACATAAATAAATCTTTAGAGTAAAGTACTTCTCGCATATTTTGCGCCTTTTCTCTCGTGT 259
consensus_10412#4      ATTGTTATGCAGAGATATCGAGAGAAGTTTCACATTGCTGTAAAACATCTTGTATGTAGT 257
                                 *     *                                   *       

consensus_10412#0      AAGAACCGAGAAAAGAGTACTTGTTCGCATTTC-TGAGCATGTTCCTAAGAAACTGA-GG 309
consensus_10412#1      AAGAACTGAGAGAAGAGTGCATGTCCGCATTTC-TGAGCATGTTCCTAAGAAACTGA-GG 409
consensus_10412#6      AGCATCAGCCGTTGTATTCTCTGTATTCTCTTAATATGCTTCTCTATGAGCATCGGATAG 108
consensus_10412#5      TAATAAAATGACTTATTTGACTATAAGGCTGGGACACTTTACACTTTATATTTCTGATGT 276
consensus_10412#3      TGATATTAGTCCATTAATAGTTCTCAAAAGTTA-CCCGTAATTTAATCTTCACTAGA-AT 312
consensus_10412#2      TCAAGTCGTTGTGTAGATAATGCTTGGGGGCTATGAGACTAGCTTAAAATCCGAGTATAG 319
consensus_10412#4      GTGGAAGAATGGATT--TATTCATGGAATAGTA-CATTCAGATGTGATCATTTAAGGAAA 314
                                        *     *                                    

consensus_10412#0      CTGCGAGGGACGAGGGC-TCTC-AACAGTGCGATAGCTCGGCATTTACTCGACACCAGGC 367
consensus_10412#1      CTGCAAGGGTCCAGGGC-TCTC-AACAGTGCGATAGCTCGGCATTTACTCGACACCGGGC 467
consensus_10412#6      GTGACGATTACCAAAAC-TATC-TACAGTGTG-TAAT---ACAATCGCTGGATGA-GAAT 161
consensus_10412#5      TTTCTTTTCATATCTGTGTATT-CAAATGTTAGCAGATATGTTGTTGTTTCATAATTTTT 335
consensus_10412#3      ATAACAAATAGTATTAAAAATC-CATAGACGAATACAAAATCAAGAATCAGGTCAAAGGA 371
consensus_10412#2      TGTTCAATTAGCAAGATTTATCATACTGTTGAGGAGTCGCATAATGAGACAAAGA-GGCC 378
consensus_10412#4      ACTACATCTGGTGAACAAGATC-AGAATTTTAATAGAAATGTCAAGAC-AGGTCTACTGT 372
                                           *             *                         

consensus_10412#0      AC--ACCATTGACATTTCTCATGCCTTCAAAATCATTAGCAAACAA--AGAAGTAC--AA 421
consensus_10412#1      AC--AGCATTGACATTTCTCATGCCTTTAAAATCATTAGTAAACAA--AGAAGTAC--AA 521
consensus_10412#6      AT--GACGATGATATAACCCATA----TACAATGCCTAGTGAATAGT-ATTAATAG--AA 212
consensus_10412#5      ACTGAAGTTTGTAATAGTAGACAGTATTTGAAGTCGGAGTAGATGGT-GATACTAA--AA 392
consensus_10412#3      AA--GAGATAGACATAATGAATATGTAGAAAACAACAAGTTAAAGGCTAAAAATAACCAA 429
consensus_10412#2      ATTCAGTATTTCCAGGTTTAAGTTCCTTGCTTTTCTTAAAAACAGATGGATAAAAC---A 435
consensus_10412#4      AT--GGGGCGGAAACTTGCAGAACTACGAAAGCCATCATCCAGAAGATATAGGTCTT-TA 429
                       *            *                       *                     *

consensus_10412#0      CTGCTCTCCGGTTTGCTGAAACGGTCGCAATAAAAAAAACTGAAACCGGATCTACGTACT 481
consensus_10412#1      CTGCTCTCCGGTTTGCTGAAGCGATCGCGATAAAAAAA-CTCAAACCGGATCTGTGCACT 580
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      TTTTCTTATCACTGTATGAAAAAAAGAGAACTGAAATTAAATTGACAAATTCA------- 445
consensus_10412#3      TTAAGATCAAAGTCAACTGAACAAACTGAGTCATATGTGGAGAAATCTGAATATCCCACT 489
consensus_10412#2      ATGTTTTATGAACATATTTAATTAGTAAACAAGTTTATTGTTGTATACGTGTATGGAGTC 495
consensus_10412#4      TTAATAGTTGTCTACGCAAAATACTCCGAATCCATTG--GTCAGACACTATCAGCAACAT 487
                                                                                   

consensus_10412#0      CAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTCTTTTGTTTTATTTT 541
consensus_10412#1      CAAAAAGAGACAGTGATAAACTTATTACTACCCTGGTAATCCTTTTTT------------ 628
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      TCTACCTAGCATTTGTATTGATGGTGTTGTTCAGAGGAACAATCATATTTTCACGACTA- 548
consensus_10412#2      CATGAATTTACAGTTATATGAATATCAATTGATAGATCTTTAATATTGTTAATTTTTGGT 555
consensus_10412#4      TCTACTGTGGGAGAGAACAAACAGACTACATT---------------------------- 519
                                                                                   

consensus_10412#0      TTTATATTAGTTTTATTTTGGTTAATATTTAGTTTTTTTATTATATTCCTCTTCCCTTAC 601
consensus_10412#1      ------------------------------------------------------------
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      ------------------------------------------------------------
consensus_10412#2      AAAAAACGACTGTTTATTANGGG------------------------------------- 578
consensus_10412#4      ------------------------------------------------------------
                                                                                   

consensus_10412#0      CCAATTCTTAAACCATCCTTTCTCTCACACATTTCCGCTCACTTGTCTCTCTTAATTATA 661
consensus_10412#1      ------------------------------------------------------------
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      ------------------------------------------------------------
consensus_10412#2      ------------------------------------------------------------
consensus_10412#4      ------------------------------------------------------------
                                                                                   

consensus_10412#0      TGAACTCTCCAAATTTTAAAAGACTAATATTTGAACGAAGAATATTCCTTTCGATAGATT 721
consensus_10412#1      ------------------------------------------------------------
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      ------------------------------------------------------------
consensus_10412#2      ------------------------------------------------------------
consensus_10412#4      ------------------------------------------------------------
                                                                                   

consensus_10412#0      CTCTTCAGGTTCTACAATTATATGTCCAAATTAATAATCCAAATTTTATTCAATTATTGC 781
consensus_10412#1      ------------------------------------------------------------
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      ------------------------------------------------------------
consensus_10412#2      ------------------------------------------------------------
consensus_10412#4      ------------------------------------------------------------
                                                                                   

consensus_10412#0      GTAACCCACCCTAATTGTTTTTAATTACCGCTAAAATTACCACACATTTTATCTTATCTG 841
consensus_10412#1      ------------------------------------------------------------
consensus_10412#6      ------------------------------------------------------------
consensus_10412#5      ------------------------------------------------------------
consensus_10412#3      ------------------------------------------------------------
consensus_10412#2      ------------------------------------------------------------
consensus_10412#4      ------------------------------------------------------------
                                                                                   

consensus_10412#0      TCTCGTGTGTGCCTCAAAATCGAATTNCCCGCGACACACCATGGCGGCN 890
consensus_10412#1      -------------------------------------------------
consensus_10412#6      -------------------------------------------------
consensus_10412#5      -------------------------------------------------
consensus_10412#3      -------------------------------------------------
consensus_10412#2      -------------------------------------------------
consensus_10412#4      -------------------------------------------------