cluster # 10413

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Schistosoma mansoni
cluster # 10413 cluster # 10413 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10413#0 length = 1082 sequences # 6
consensus_10413#1 length = 731 sequences # 6

consensus_10413#2 length = 504 sequences # 3
consensus_10413#3 length = 204 sequences # 1

consensusID : consensus_10413#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1082
fasta sequence

                              [TCGCAGGCCAG-AATTCGGTCCGA--------GGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAG-TTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGA-AAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGTAACATCAGAAATGCTCTTTACATTCACTT-AATAACGTATGATCGAATTTATTGGTCACTTCTAATTTAGTTTCTATTGAATAAATTGTGTGGCAGTTGTCATCATCATACCATATGGTATACCAATTTAAATGAATA-TTTATGTAAACTTCAACTGTAAGACCAT-TCTNGGCT-ATGTT-AATATCTATTCATTCTAATAAGATGAAT-GGTTGCTTTGTTAAATAAATTGC-AATCC]

[+] EMBL CD077664             [TCGC GGCCAGAAATTCGGTCCGA        GGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAG TTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD077657             [TCGCAGGCAAG AATTCGGTCCGA        GGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAGTTTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD080326             [   gAGGCCAG AATTCGGCACGAGGCCAAGTGGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAG TTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTNTATTATGAAATTGANAAAC ACCCAG AAAAGCATGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD083150             [                                                                                                                                                                                                                     aggacTAAC ACGAGGAGAGAAACTTGTTTTCAGTGTTTTATAAAAATGTAGTTCGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGA AAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGTAACATCAGAAATGCTCTNTACATTCACTTNNAT ACGTATGATCGAATTTATTGGTCACTTCTAATTTAGTTTCTATTGAATAAANTGTGTGGCAGTTGTCATCATCATACCATATGGTATACCAATTTAAATGAATATTTTATGTAAACTTCAACTGTTAGAACATNNCTNGGCT ATGTTNAATATCTATTCATTCTAATAAGATGAATGGGGTGCCTTGTTAANTAAATGGC AATC ]
[-] EMBL CD076721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGA AAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGTAACATCAGAAATGCTCTTTACATTCACTT AATAACGTATGATCGAATTTATTGGTCACTTCTAATTTAGTTTCTATTGAATAAATTGTGTGGCAGTTGTCATCATCATACCATATGGTATACCAATTTAAATGAATA TTTATGTAAACTTCAACTGTAAGACCAT TCT TGCTAATGTT AATATCTATTCATTCTAATAAGATGAAT GGTTGCTTTGTTAAATAAATTGCAAATCC]
[-] EMBL CD074246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGATTTACCTCCAACTCATCCAATCCGTTTGGGCCTAGCTTTAAACTTCTCTGTGTTTTATTATGAAATTGA AAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTTTGAACGTGAAGCTGGTCAGTAACAAAGAATATCAGTATCCCCGTTATTTTTACTTTGAAAACGTAACATCAGAAATGCTCTTTACATTCACTT AATAACGTATGATCGAATTTATTGGTCACTTTTAAATTAGTTTTTATTGAATAAATTGTGTGGCAGTTGTCATCATCATACCATATGGTATACCAATTTAAATGAATA TTTATGTAAACTTCAACTGTAAGACCAT TTTTGGTA ATGTT AAAATCTATTCATTTTAATAAGATGAAT GGTTGCTTTGTTAAATAAAATGC A    ]




>consensus_10413#0
TCGCAGGCCAGAATTCGGTCCGAGGCTTGCTACATTTTATCCACTGCGCTCCCGTGATAT
TAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGA
TTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGA
AAAAAGTTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGG
CTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAAC
AACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGG
AATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTG
AAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATT
TAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTT
ACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGG
GCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCAT
GCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTG
GTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGA
CTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTT
GAAAACGTAACATCAGAAATGCTCTTTACATTCACTTAATAACGTATGATCGAATTTATT
GGTCACTTCTAATTTAGTTTCTATTGAATAAATTGTGTGGCAGTTGTCATCATCATACCA
TATGGTATACCAATTTAAATGAATATTTATGTAAACTTCAACTGTAAGACCATTCTNGGC
TATGTTAATATCTATTCATTCTAATAAGATGAATGGTTGCTTTGTTAAATAAATTGCAAT
CC

consensusID : consensus_10413#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 731
fasta sequence

                              [AGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGTAACATCAGAAATGCTCTCTACATTCACTTAATAACTTTCTATTGAATAAATTGTGTGGCAGTTGTCATCATCATACCATATGGTATACCAATTTAAATGAATATTTATGTAAACTTCACCTGTAAGACCATTCTTGCTAATGGTAATATCTATTCATTCTAATACGATGAATGGCTGCTTTGNTAACTAAATTGCAAATCA]

[+] EMBL CD078641             [AGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGTAACATCAGAAATGCTCTCTACATTCACTTAATAACTTTCTATTGAATAAATTGTGTGGCAGTTGTCATCATCATACCATATGGTATACCAATTTAAATGAATATTTATGTAAACTTCACCTGTAAGACCATTCTTGCTAATGGTAATATCTATTCATTCTAATACGATGAATGGCTGCTTTGNTAACTAAATTGCAAATCA]
[-] EMBL CD190657             [   AAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGC                                                                                                                                                                                                                                                          ]
[+] EMBL CD201441             [             GGGAGAATACCGTAGCACTATCGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGA                                                                                                                                                                                                               ]
[-] EMBL CD059941             [                                                                       GATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAAC                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD125958             [                                                                                                                                                                                                                                            GAGAAGG GAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGT                                                                                                                                                                                                         ]
[-] EMBL CD125998             [                                                                                                                                                                                                                                             AGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGTA                                                                                                                                                                                                        ]




>consensus_10413#1
AGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCC
AGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGAT
TCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATTTAGCTGAGGTTCTAACTG
GAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTTACCAGGCAGCGACGGAGA
AGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGGGCCTAGCTCTAAACTTCT
CTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCATGCTCAATTGCCCAGACTG
CATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTGGTTCCTTTAAAGATAGTA
CACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGACTTCTGAACGTGAAGCTG
CTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTTGAAAACGTAACATCAGAA
ATGCTCTCTACATTCACTTAATAACTTTCTATTGAATAAATTGTGTGGCAGTTGTCATCA
TCATACCATATGGTATACCAATTTAAATGAATATTTATGTAAACTTCACCTGTAAGACCA
TTCTTGCTAATGGTAATATCTATTCATTCTAATACGATGAATGGCTGCTTTGNTAACTAA
ATTGCAAATCA

consensusID : consensus_10413#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 504
fasta sequence

                              [CCGCTTTATCGACTGGCCAATTTAGTATCCAAGTGGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAGTTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGACTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATGCTCACAAGAAACTTGGGGGTACCGG]

[-] EMBL CD066084             [CCGCTTTATCGACTGGCCAATTTAGTATCCAAGTGGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAGTTGTTGAGACATC AAAACACTTAAAAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGACTTATTACACGAATCGCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATGCTCACAAGAAACTTGGGGGTACCGG]
[-] EMBL CD189211             [CCGCTTTATCGACTGGCCAATTTAGTATCCAAGTGGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAGTTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGGAATTACA                                                                                                                              ]
[+] EMBL CD188873             [               GCCAATTTAGTATCCAAGTGGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAGTTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGG ATTAC                                                                                                                               ]




>consensus_10413#2
CCGCTTTATCGACTGGCCAATTTAGTATCCAAGTGGCTTGCTACATTTTATCCACTGCGC
TCCCGTGATATTAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAA
AGATTCTCTGATTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGC
GTGTGCTATGAAAAAAGTTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTT
GTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTC
AAATATTGAACAACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCAC
TATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGACTTATTACACGAATCGCT
GCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATGC
TCACAAGAAACTTGGGGGTACCGG

consensusID : consensus_10413#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 204
fasta sequence

                              [CAACAAAAAAGGTCTTTTCATTCACTTCATAACTTTTTATTTAATAAAAAAAGGGGGGGGGGGGGGGTCACTCAAACAAATGGGATACCAATTTAAATGAATATTTATGTAAACTTCAACTGTAAGACCATTCTTGCTAAAGTTAAAATTCTATTCATTCTAATAAGATGAATGGTTGCTTTGTTAAATAAATTGCAAATCCAC]

[-] EMBL CD073105             [CAACAAAAAAGGTCTTTTCATTCACTTCATAACTTTTTATTTAATAAAAAAAGGGGGGGGGGGGGGGTCACTCAAACAAATGGGATACCAATTTAAATGAATATTTATGTAAACTTCAACTGTAAGACCATTCTTGCTAAAGTTAAAATTCTATTCATTCTAATAAGATGAATGGTTGCTTTGTTAAATAAATTGCAAATCCAC]




>consensus_10413#3
CAACAAAAAAGGTCTTTTCATTCACTTCATAACTTTTTATTTAATAAAAAAAGGGGGGGG
GGGGGGGTCACTCAAACAAATGGGATACCAATTTAAATGAATATTTATGTAAACTTCAAC
TGTAAGACCATTCTTGCTAAAGTTAAAATTCTATTCATTCTAATAAGATGAATGGTTGCT
TTGTTAAATAAATTGCAAATCCAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10413#1      ------------------------------------------------------------
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      TCGCAGGCCAGAATTCGGTCCGAGGCTTGCTACATTTTATCCACTGCGCTCCCGTGATAT 60
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      ------------------------------------------------------------
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      TAACAATGTGTGATGACTCTTGGCTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGA 120
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      ------------------------------------------------------------
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      TTACGTTGGCTAAGATTCAGGAGCAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGA 180
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      ------------------------------------------------------------
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      AAAAAGTTGTTGAGACATCAAAAACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGG 240
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      ------------------------------------------------------------
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      CTTATAAAAATGTAGTTGGGTGTTGTAGGTCAGCTTGGCGTGTCGTTTCAAATATTGAAC 300
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      ------------------AGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGG 42
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      AACGATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAGCACTATTGAGAAGG 360
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      AATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTG 102
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      AATTACAAGCTGTCTGCCAGGAAGTCTTAGATTTATTACACGAATCGCTGCTCAAAAGTG 420
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      AAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATT 162
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      AAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGATTATTATAGATATT 480
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      TAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTT 222
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      TAGCTGAGGTTCTAACTGGAGACAAACGTGCTGATGTTGTAAAACATTCAAGAGAAGCTT 540
consensus_10413#2      ------------------------------------------------------------
                                                                                   

consensus_10413#1      ACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGG 282
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      ACCAGGCAGCGACGGAGAAGGCGAATAGTGATCTACCTCCAACTCATCCAATCCGTCTGG 600
consensus_10413#2      --------------------------CCGCTTTATCGACTGGCCAATTTAGTATCCAAGT 34
                                                                                   

consensus_10413#1      GCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCAT 342
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      GCCTAGCTCTAAACTTCTCTGTGTTTTATTATGAAATTGAAAACAACCCAGAAAAAGCAT 660
consensus_10413#2      GGCTTGCTACATTTTATCCACTGCGCTCCCGTGATATTAACAATGTGTGATGACTCTTGG 94
                                                                                   

consensus_10413#1      GCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTG 402
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      GCTCAATTGCCCAGACTGCATTTAATGAATCAATCGGACAGTTAGACCAACCTGACAGTG 720
consensus_10413#2      CTTAATGAATCTAGTATCAAGGATAAAGATTCTCTGATTACGTTGGCTAAGATTCAGGAG 154
                                                                                   

consensus_10413#1      GTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGA 462
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      GTTCCTTTAAAGATAGTACACTTGTAATGCAACTCCTTCGTGATAACTTAACTTTATGGA 780
consensus_10413#2      CAAGCTGAGAGATTCAATGATATGGCGTGTGCTATGAAAAAAGTTGTTGAGACATCAAAA 214
                                                                                   

consensus_10413#1      CTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTT 522
consensus_10413#3      ------------------------------------------------------------
consensus_10413#0      CTTCTGAACGTGAAGCTGCTCAGTAACAAAGAATATCAGTATCCACGTTATTTTTACTTT 840
consensus_10413#2      ACACTTAACAACGAGGAGAGAAACTTGTTTTCAGTGGCTTATAAAAATGTAGTTGGGTGT 274
                                                                                   

consensus_10413#1      GAAAACGTAACATCAGAAATGCTCTCTACATTCACTTAATAAC----------------- 565
consensus_10413#3      ----------CAACAAAAAAGGTCTTTTCATTCACTTCATAAC----------------- 33
consensus_10413#0      GAAAACGTAACATCAGAAATGCTCTTTACATTCACTTAATAACGTATGATCGAATTTATT 900
consensus_10413#2      TGTAG---GTCAGCTTGGCGTGTCGTTTCAAATATTGAACAAC----------------- 314
                                 ** *        **  * **   * *  * ***                 

consensus_10413#1      -----------------TTTCTATTGAATAAAT--TGTGTGGCAGTTGTCATCATCATAC 606
consensus_10413#3      -----------------TTTTTATTTAATAAAAAAAGGGGGGGGGGGGGGGTCACTCAAA 76
consensus_10413#0      GGTCACTTCTAATTTAGTTTCTATTGAATAAAT--TGTGTGGCAGTTGTCATCATCATAC 958
consensus_10413#2      -----------------GATTGGATGACCAGAAGAAAAAGCAAGCGGGAGAATACCGTAG 357
                                          *    * *  * *               *     *    * 

consensus_10413#1      CA-TATGGTATACCAATTTAAATGAATATTTATGTAAACTTCAC--CTGTAAGACCATTC 663
consensus_10413#3      CA-AATGGGATACCAATTTAAATGAATATTTATGTAAACTTCAA--CTGTAAGACCATTC 133
consensus_10413#0      CA-TATGGTATACCAATTTAAATGAATATTTATGTAAACTTCAA--CTGTAAGACCATTC 1015
consensus_10413#2      CACTATTGAGAAGGAATTACAAGCTGTCTGCCAGGAAGTCTTAGACTTATTACACGAATC 417
                       **  ** *   *  ****  **    * *    * **   * *    * * * ** * **

consensus_10413#1      -TTGCT--AATGGTAATAT-CTATTCA------------TTCTAATACGATGAATGGCTG 707
consensus_10413#3      -TTGCT--AAAGTTAAAATTCTATTCA------------TTCTAATAAGATGAATGGTTG 178
consensus_10413#0      -TNGGC--TATGTTAATAT-CTATTCA------------TTCTAATAAGATGAATGGTTG 1059
consensus_10413#2      GCTGCTCAAAAGTGAAAATACAGCTGAAGGATTCGTGTTTTATAAGAAAATGGAAGGTGA 477
                          *     * *  ** ** *   * *            ** *** *  *** * **   

consensus_10413#1      CTTTGNTAACTAAATTGCAAATCA--- 731
consensus_10413#3      CTTTGTTAAATAAATTGCAAATCCAC- 204
consensus_10413#0      CTTTGTTAAATAAATTGCAATCC---- 1082
consensus_10413#2      TGCTCACAAGAAACTTGGGGGTACCGG 504
                          *   **  ** ***