These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10440#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1433 fasta sequence [TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAAGGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGATGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTTTCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATTATTGGGTCAACTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCTTGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGATATTTTTCATGT--TATATATATATACAGCTTTCACATTCTCATTCATCATGTATACCGATAGATATTCTGTTTGTATCCCATTAGAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCCAGGGGGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGGTTTGTTTTTCATTTCGTAAATGATTNTTGTATTTTTTTGGGTTTTTGATAAAAGGGATCGTTATCTATTTANAGATGCTCCTGATCGGGTATTACTCTATTGGTGTTGCTGTATGTCTGTCCCGTCTGACTTTTATCTGGGAAATTTAAATTATTTT] [-] EMBL CD159860 [TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAAGGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGATGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTT CACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTG ] [-] EMBL CD159865 [TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAAGGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGATGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTAT ] [+] EMBL CD082942 [ CCAGATACAGGATTTATCTCA TTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTTTCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATTATTGGGTCAACTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTNTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGG ] [-] EMBL CD155088 [ ATTTATCTCATTTAAACGCGCTTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATGTAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTTTCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATTATTGGGCCAATTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTG ] [+] EMBL CD188671 [ ACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTACAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACTCACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAATGTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATT ] [+] EMBL CD140379 [ CATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCCAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCTTGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGATATTTTTCATGTTATATATATATATACAGCTTTCACATTCTCATTCATCATGTATACCGATAGATATTCTGTTTGTATCCCATTAGAATTTGTTTCTTCTTTACTCTTT ] [+] EMBL CD080085 [ AGCAATCGAAATAGCAAAATCTAAAGGTATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGTACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCCTAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCTTGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGATATTTTTTATGT TATATATATATACAGCTTTCACATTCTCATTCATCATGTATACAGATAGATATTCTGTTTGTATCCAATTATAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCCAGGGGGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGGTTTGTTTTTCATTTCGTAAATGATTNTTGTATTTTTTTGGGTTTTTGATAAAAGGGATCGTTATCTATTTANAGATGCTCCTGATCGGGTATTACTCTATTGGTGTTGCTGTATGTCTGTCCCGTCTGACTTTTATCTGGGAAATTTAAATTATTTT] consensusID : consensus_10440#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 744 fasta sequence [ACAGCTTTCACATTCTCATTCATCATGTATACAGATAGATATTCTGTTTGTATCCAATTAGAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT-AGAGAAGGGATCGTTTATCTTATAT-CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAATACAAAAAAAGTAATGATTTCTCTACCTTGAATCTCTTTATGGAATAGAATCTATAATTTCAACTGATCATCTAATCAATACA] [-] EMBL CD077206 [ACAGCTTTCACATTCTCATTCATCATGTATACAGATAGATATTCTGTTTGTATCCAATTAGAATTTGTTTCTTCTTTACTCTTTTCATAAATATAACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCCTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT AGAGAAGGGATCGTTTATCTTATAT CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATAT ] [-] EMBL CD076528 [ CCACATTTAGCTATTGTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT AGAGAAGGGATCGTTTATCTTATAT CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAATACAAAAAAAGTAATGATTTCTCTACCTTGAATCTCTTTATGGAATAGAATCTATAATTTCAACTGATCATCTAATCAATACA] [-] EMBL AI977307 [ AATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTCGTAATCACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGTAACTTTGTCTGATAATTGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATATTTATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGATTGAAATGGTTGAGTAATTTTCAGCTGAGTTTTGTTTTGTTTTTCCATTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGAT AGAGAAGGGATCGTTTATCTTATAT CAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACATTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAATTAATTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAATACAAAAAAAGTAAT ] [-] EMBL AA999441 [ TTTCGTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGATAAGAGAAGGGATCGTTTATCTTATATGCAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTGCTTGTTATGTTCCTGTTCACGGTCTTGTACTNTTTATCATGGGGAAAAGTATAAATAAGTAATTATAGTATAT ] consensusID : consensus_10440#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 723 fasta sequence [TTTTTTTTTTTTTTTTTAAATTATATGAAATATATTATCTAATCAAAAGGTAAGAATTTGTACTGCACGAAACGAGTGTCCTGGATTCCACTGGTGGCCACCATCCATCTCTGCCTGATAGGCGTTATATTCAGCATTTGTTGCTGAATAAAGAGGATATTGAGGTATAGGGACCATAACACCAGAACGTCTGGATCCATCTTCTCCAGTGGATATCAACTGAAGAATTGACTTAACGGCTTCACTTGCCCCATTCGATAAGAAAATATTTTGGGGATTAGCTGATAACTGATCCCGTTGTTCTATGTATTGTGCAACGTCTTCGCGAACAA-TTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCA-CACAACTGTCC-AAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCACTAA-TTGTGTCTTTGTCGCGGCACACAAAACTTCACGAATGAATGAAATGGGCCTTTGACCAGACGCATGACAGTCCCCGATATTGCAACGGATAATTTTGTTGAATCTTTTTTTTGACCCTTGTGATATTTCTTTCTCTAGTTCTAACGCCCTAAGTACTATCGGTCCACGGACAGCATACTGAAGCTTCACAACATGAGGATTGATAGTGTCACAACTCATTTTTTGATATGCACGAACATTTTGAATGATGCATGAGCGACCCACAATCTGTACCAAGCGAAATCC] [+] EMBL AI395778 [TTTTTTTTTTTTTTTTTAAATTATATGAAATATATTATCTAATCAAAAGGTAAGAATTTGTACTGCACGAAACGAGTGTCCTGGATTCCACTGGTGGCCACCATCCATCTCTGCCTGATAGGCGTTATATTCAGCATTTGTTGCTGAATAAAGAGGATATTGAGGTATAGGGACCATAACACCAGAACGTCTGGATCCATCTTCTCCAGTGGATATCAACTGAAGAATTGACTTAACGGCTTCACTTGCCCCATTCGATAAGAAAATATTTTGGGGATTAGCTGATAACTGATCCCGTTGTTCTATGTATTGTGCAACGTCTTCGCGAACAA TTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCA CACAACTGTCC AAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCACTAA TTGTGTCTTTGTCGCGGCACAC ] [-] EMBL AI977695 [ ATTCGATAAGAAAATATTTTGGGGATTAGCTGATAACTGATCCGTTTGTTCTATGTATTGTGCAACGTCTTCGCGAACAACTTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCACCACAACTGTCCAAAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCA TAATTTGTGTCTTTGTCGCGGCACACAAAACTTCACGAATGAATGAAATGGGCCTTTGACCAGACGCATGACAGTCCCCGATATTGCAACGGATAATTTTGTTGAATCTTTTTTTTGACCCTTGTGATATTTCTTTCTCTAGTTCTAACGCCCTAAGTACTATCGGTCCACGGACAGCATACTGAAGCTTCACAACATGAGGATTGATAGTGTCACAACTCATTTTTTGATATGCACGAACATTTTGAATGATGCATGAGCGACCCACAATCTGTACCAAGCGAAATCC] consensusID : consensus_10440#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 637 fasta sequence [ACTTAGGGCGTTAGAACTAGAGAAAGAAATATCACAAGTTAGATCATTTTAGCTATTAATTATAATCAGGGGTCAAAAAAAAAGATTCAACAAAATTATCCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCGTGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGATGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAGCCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGATCAGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCTGTTAAGTCAATTCTTCAGTTGATATCCACTGGAGAAGATGGATCCAGACGTTCTGGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAACGCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAGTTGGAAGAAGCTNTAAATAAATGCAAAGATAAATGTATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAAT] [+] EMBL CD183437 [ACTTAGGGCGTTAGAACTAGAGAAAGAAATATCACAAGTTAGATCATTTTAGCTATTAATTATAATCAGGGGTCAAAAAAAAAGATTCAACAAAATTATCCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCGTGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGATGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAGCCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGATCAGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCTGTTAAGTCAATTCTTCAGTTGATATCCACTGGAGAAGATGGATCCAGACGTTCTGGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAACGCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAGTTGGAAGAAGCTNTAAATAAATGCAAAGATAAATGTATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAAT] [+] EMBL AI975253 [ AAATTATCCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCGTGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGATGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAGCCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGATCAGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCCGTTAAGTCAATTCTTCAGTTGATATCCACTGGAGAAGATGGATCCAGACGTTCTGGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAACGCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAGTTGGAAGAAGCTTTAAA ] consensusID : consensus_10440#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 407 fasta sequence [TATATGTATTGATTAGATGATCAGTTGAAATTATAGATTCTATTCACATAAAGAGATTCAAGGTAGAGAAATCATTACTTTTTTGGTATTTTTCATGTGATATCATTTTTATAACAGAAATAATAATTAATAAGTATATATAATATAATTAATTATTTAACTTTTCACATGATAAAAGTAAAGATTGTGAAAGGAACTTAACAGCCAACAACATTAGGGTTAATTAAANGNATCGGTTGGCATCATTTGTTATAGGTTAACGTCCTTCTCTTTCGGAATCCCCTAAATTCAACTTCTTTTACGAATGGAAACAAACAATCTCGCTGGAATTCTCACATTCCATCTCAATTTTTTCGCTAACCTTGTTATCATTGTTGTAATGATAATTTTACAAGGATGGGAGTTAT] [+] EMBL AI639553 [TATATGTATTGATTAGATGATCAGTTGAAATTATAGATTCTATTCACATAAAGAGATTCAAGGTAGAGAAATCATTACTTTTTTGGTATTTTTCATGTGATATCATTTTTATAACAGAAATAATAATTAATAAGTATATATAATATAATTAATTATTTAACTTTTCACATGATAAAAGTAAAGATTGTGAAAGGAACTTAACAGCCAACAACATTAGGGTTAATTAAANGNATCGGTTGGCATCATTTGTTATAGGTTAACGTCCTTCTCTTTCGGAATCCCCTAAATTCAACTTCTTTTACGAATGGAAACAAACAATCTCGCTGGAATTCTCACATTCCATCTCAATTTTTTCGCTAACCTTGTTATCATTGTTGTAATGATAATTTTACAAGGATGGGAGTTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10440#0 TATCCCACGTGCTTTGGTAGTAATCAACCCTGGCAATCCAACAGGTCAATTACTATCAAA 60 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 GGACACAATTACAAACGTTTTAAAATTCGCTTACAAACATAATTTAGTTGTATTAGCCGA 120 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TGAAGTATATCAACACAACATTTATGCACCAGATACAGGATTTATCTCATTTAAACGCGC 180 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TTTATATGATATTGGCGGAAGAATTTCCACGGAATTACAGTTAGCATCATTTATGTCATG 240 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TAGTAAAGGTTATATGGGAGAATGTGGTCTTCGTGGTGGATATTGTGAACTTGTGAATTT 300 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TCCTGAAGATGTTCAACAACAATTGTATAAATCCCTTTCAGCTCGACTATGTTCTTCATT 360 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 ATTGGGTCAACTAACAATGGATGTGGTTGTAAATCCTCCAAAACCTCATGAACCATCTTA 420 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 CAATTCATTTATGGAAGAAAAATCATCAGTGCTAGAAGAACTTAAACAAAAAGCTGAACT 480 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 CACTACAAAATCATTAAATTCACTTCAAGGTTTTTCATGTAACCCAATCACTGGAGCAAT 540 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 GTATGCATTTCCACGAATTGATCTACCTAAAAAAGCAATCGAAATAGCAAAATCTAAAGG 600 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TATGCAACCAGACTTTATGTACTGCTTAGAACTCTTGGAAGAATATGGCGTCTGTGTAGT 660 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 ACCAGGATCTGGATTCGGTCAAGTACCAGGAACTTGGCATTTTAGAATAACGATTCTCCC 720 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TAGCATTGAAGAAATGAAACTGGTCATGGACTATTTAAAAGAATTTCATACATCTTTTCT 780 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TGCAAAGTATTCTTGAATCGTCTAACTATATGACAATCCATAGAGTATCTGAAATTTTGA 840 consensus_10440#1 ------------------------------------------------------------ consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 ------------------------------------------------------------ consensus_10440#0 TATTTTTCATGTTATATATATATACAGCTTTCACATTCTCATTCATCATGTATACCGAT- 899 consensus_10440#1 -----------------------ACAGCTTTCACATTCTCATTCATCATGTATACAGAT- 36 consensus_10440#4 ----------------------------------------------TATATGTATTGATT 14 consensus_10440#3 -------------------ACTTAGGGCGTTAGAACTAGAGAAAGAAATAT-CACAAGTT 40 consensus_10440#2 -----------------------------TTTTTTTTTTTTTTTTTAAATTATATGAAAT 31 * * * consensus_10440#0 AGATATTCTGTTTGTATCCCATTAGAATTTGTTTC-TTCTTTACTCTTTTCATAAATATA 958 consensus_10440#1 AGATATTCTGTTTGTATCCAATTAGAATTTGTTTC-TTCTTTACTCTTTTCATAAATATA 95 consensus_10440#4 AGATGATCAGTTGA-----AATTATAGATTCTATT-CACATAAAGAGATTCAAGGTAGAG 68 consensus_10440#3 AGATCATT--TTAGCTATTAATTATAATCAGGGGT-CAAAAAAAAAGATTCAACAAAATT 97 consensus_10440#2 ATATTATCTAATCAAAA--GGTAAGAATTTGTACTGCACGAAACGAGTGTCCTGGATTCC 89 * ** * * * * * * ** consensus_10440#0 ACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCAC-------ATTTAGCTATT-- 1009 consensus_10440#1 ACATAATTTCTCTTCAGTTATCTATTTTTGAATCTACCAC-------ATTTAGCTATT-- 146 consensus_10440#4 AAATCATTACTTTTTTGGTATTTTTCATGTGAT--ATCAT-------TTTTA-TAACA-- 116 consensus_10440#3 AT-CCGTTGCAATATCGGGGACTGTCATGCGTCTGGTCAAAGGCCCATTTCATTCATTCG 156 consensus_10440#2 AC-TGGTGGCCACCATCCATCTCTGCCTGATAGGCGTTATATTCAGCATTTGTTGCTGAA 148 * * * * * ** consensus_10440#0 -GTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTC-G 1067 consensus_10440#1 -GTACTAATGTTTAATTCTTATTTATTTAAGACTCCAATTATCAAACGAAGCTGTGTC-G 204 consensus_10440#4 -GAAATAATAATTAATAAGTATATAT-----AATATAATTAATTATTTAACTTTTCAC-A 169 consensus_10440#3 TGAAGTTTTGTGTGCCGCGACAAAGACACAAATTATGGATACCAACTTAGTTCAGGACGA 216 consensus_10440#2 TAAAGAGGATATTGAGGTATAGGGACCATAACACCAGAACGTCTGGATCCATCTTCTC-- 206 * * * consensus_10440#0 TAATCCAGGGGGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGT-AACTTTGTCTG 1126 consensus_10440#1 TAATC---ACAGGGGGGGGGTTCTTATCTAACCCTCTAATTACGACGT-AACTTTGTCTG 260 consensus_10440#4 TGATA-----AAAGTAAAGATTGTGAAAGGAACT--TAACAGCCA-AC-AACATTAGG-G 219 consensus_10440#3 TGCTAAGCTAAGAGCCAGGAGATTTTTGGACAGTTGTGGTGGGAGTGTTGGAGTCTACAG 276 consensus_10440#2 CAGTGGATATCAACTGAAGAATTGACTTAACGGCTTCACTTGCCCCAT--TCGATAAGAA 264 * * consensus_10440#0 ATAAT-TGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATAT 1185 consensus_10440#1 ATAAT-TGGAGTCTTCAATCACTTTATAATTTAATCTTTTCTATTCTTTTGTTTATATAT 319 consensus_10440#4 TTAAT-TAAANGNATCGGT-------TGGCATCATTTGTTATAG------GTTAACGTCC 265 consensus_10440#3 CCAGTCTACAGGCGTAGAAGTTGTTCGCGAAGACGTTGCACAATACATAGAACAACGGGA 336 consensus_10440#2 AATATTTTGGGGATTAGCTGA--TAACTGATCCCGTTGTTCTATGTATTGTGCAACGTCT 322 * * * * * * consensus_10440#0 TT---ATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGAT 1242 consensus_10440#1 TT---ATCTATTTACAAACAATTGATTAATCAATAGTTTATGCAGAAAAAAAATGATGAT 376 consensus_10440#4 TT---CTCT-TTCGGAATCCCCTAAAT--TCAACTTCTTTTACGAATGGAAACAAACAAT 319 consensus_10440#3 TC---AGTTATCAGCTAATCCCCAAAATATTTTCTTATCGAATGGGGCAAGTGAAGCTGT 393 consensus_10440#2 TCGCGAACAATTCTACGCCTGTAGACTGGCTGTAGACTCCAACACTCCCACACAACTGTC 382 * * * * * consensus_10440#0 TGAA-----ATGGTTGAGTAATTTTCA--GC-TGAGTTTTGGTT--TGTTTTTC-ATTTC 1291 consensus_10440#1 TGAA-----ATGGTTGAGTAATTTTCA--GC-TGAGTTTTGTTT--TGTTTTTCCATTTC 426 consensus_10440#4 CTCG-----CTGG------AATTCTCAC-AT-TCCATCTCAATT--TTTTCGCTAACCTT 364 consensus_10440#3 TAAG-----TCAATTCTTCAGTTGATAT-CCACTGGAGAAGATG--GATCCAGACGTTCT 445 consensus_10440#2 CAAAATCTCCTGGCTCTTAGCTTAGCATCGTCCTGAACTAAGTTGGTATCCACTAATTGT 442 ** * * * consensus_10440#0 GT--AAATGATTNTT-GTATTTTTTTGGGTTTTT--GATAAA--AGGGATC--GTT-ATC 1341 consensus_10440#1 GTTAAAATGATTGTTTGTATTTTTTTTGGTTTTTCTGATAGAGAAGGGATC--GTTTATC 484 consensus_10440#4 GTT---ATCATTGTT-GTAAT------GATAATTTTACAAGGATGGGAGTT--AT----- 407 consensus_10440#3 GGTGTTATGGTCCCTATACCTCAATATCCTCTTTATTCAGCAACAAATGCTGAATATAAC 505 consensus_10440#2 GTCTTTGTCGCGGCACACAAA--ACTTCACGAATG-AATGAAATGGGCCTTTGACCAGAC 499 * * * consensus_10440#0 TATTTANAGATGCTCCTGATCGGGTATTACTCTATTGG-TGTTGCTGTATGTCTGTCCCG 1400 consensus_10440#1 TTATATCAAATGATGCTACACTGATCACGGTTAATTAACTCTTATTGTTTGTTTG-CTTG 543 consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 GCCTATCAGATTGATTACTACTTGGATGAATCAAATGGATGGGACCTAAGTATTGAACAG 565 consensus_10440#2 GCATGACAGTC---CCCGATATTGCAACGGATAATTTTGTTGAATCTTTTTTTTGACCCT 556 consensus_10440#0 TCTGACTTTTATCTGGGAAATTTAAATTATTTT--------------------------- 1433 consensus_10440#1 TTATGTTCCTGTTCACGTTCTTGTACTTTTTATCATGGGGAAAAGTATAAATAAT--TAA 601 consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 TTGGAAGAAGCTNTAAATAAATGCAAAGATAAATGTATCCCACGTGCTTTGGTAG--TAA 623 consensus_10440#2 TGTGATATTTCTTTCTCTAGTTCTAACGCCCTAAGTACTATCGGTCCACGGACAGCATAC 616 consensus_10440#0 ------------------------------------------------------------ consensus_10440#1 TTATATTATATATACTTATTAATTATTATTTCTGTTATAAAAATGATATCACATGAAAAA 661 consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 TCAACCCTGGCAAT---------------------------------------------- 637 consensus_10440#2 TGAAGCTTCACAACATGAGGATTGATAGTGTCACAACTCATTTTTTGATATGCACGAACA 676 consensus_10440#0 ------------------------------------------------------------ consensus_10440#1 TACAAAAAAAGTAATGATTTCTCTACCTTGAATCTCTTTATGGAATAGAATCTATAATTT 721 consensus_10440#4 ------------------------------------------------------------ consensus_10440#3 ------------------------------------------------------------ consensus_10440#2 TTTTGAATGATGCATGAGCGACCCACAATCTGTACCAAGCGAAATCC------------- 723 consensus_10440#0 ----------------------- consensus_10440#1 CAACTGATCATCTAATCAATACA 744 consensus_10440#4 ----------------------- consensus_10440#3 ----------------------- consensus_10440#2 ----------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||