Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10450 cluster # 10450       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10450#0 length = 1315 sequences # 10  
consensus_10450#1 length = 773 sequences # 5  
consensus_10450#2 length = 242 sequences # 1  

consensusID : consensus_10450#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1315
fasta sequence
                              [AGCCATAATTCGCCGAGGTGTTTGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCACCTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAAAGGCCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGCTTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTATCAATGAAGAGGCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAATGAATGCTGAAGTAGAAAAACATTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGGTTATTCAGAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTAAAACCAGTTTTCGTACGTGCACGTGATCGAATAACGTTACAAGCTAAACATAAAGCAGACCAACTCGCTCAGGAGACCGAAGCAGAAATTAAACGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGATGCTCTTGACGCAATAGATTCTGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAAGGCTGAAATTGAGCGAATTCGTAATATGACTGATGAACAACGACGTGAAGAATTTATAAGAAATCCAAAAGTTATCACCAACAAAACAGCTAAAGGAAAATACAAGTTTTTACAGAAGTACTTCCATCGGGGAGCTTTCTATGTTACTTCGTTGGAGGATAAAGTGTTTCAACAAGACTTTACACAGCCTACTCTGGAAGATCATTTTGACAAAACAAAGTTGCCTACTGTTATGCAGGTTAAGAACTTTGGTCGTGCTGGCCGGACTAAGTATACACATTTGGTTGATCAAGATACAACTGTATTCGACTCACCATGGTCAACAACCAATCCACAAAATATGAAGTTCCAGTCAACTCACGGTGGAGGATTTAAACAAATATTCTCGAAACCCGGTTTATCTAAACAGAAGAAAAAGACGGGATAGCACCTTGATTATGATAATTTGTACATATATTTAACGAAACAGCAAGTCAAATTTTCCTGTTTTCACTGATTTTCGTCTTTTTTATCCACAAGTATGTACACAGTTGATGCGAATAAATAATTCTGTTTATTTGAGAATTCATGTTCGGTGAATTTGTTGCTGATTATATACATTT]

[+] EMBL CD081561             [AGCCATAATTCGCCGAGGTGTTTGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCACCTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAAAGGCCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGCTTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTATCAATGAAGAGGCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAATGAATGCTGAAGTAGAAAAACATTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGGTTATTCAGAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTAAAACCAGTTTTCGTACGTGCACGTGATCGAATAACGTTACAAGCTAAACATAAAGCAGACCAACTCGCTCAGGAGACCGAAGCAGAAATTAAACGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGACGCTCTTGACGCAATAGATTCTGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAAGGCTGNAATTGAGCGAATTCGTAATATGACTGATGAACAACGACGTGAAGAATTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD185128             [                                                                                                                                                                                                                                                                                                      TATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGCATTGGGTTATTCAGAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTAAAACCAGTTTTCGTACGTGCACGTGATCGAATAACGTTACAAACTAAACATAAAGCAGACCAACTCGCTCAGGAGACCGAAGCAGAAATTAAACGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGACGCTCCTGACGCAATAGATTCTGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD149116             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCCGAGGAG GATAACCAGCAATTAAACGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGATGCTCTTGACGCAATAGATTCTGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD200117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGCAGAAATTCAACGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGATGCTCTTGACGCAATAGATTCTGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD200112             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGCAGATATTCAACGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGATGCTCTTGACGCAATAGATTCTGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD148874             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGCAGAAGTTAACCGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGACGCTCTTGACGCAATAGATTATGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD149234             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ACACTTAAGCTACTAGAAGCAGAACTGCGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGATGCTCTTGACGCAATAGATTCTGATGAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGCGAGgagga                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD136825             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAAGGCTGAAATTGAGCGAATTCGTAATATGACTGATGAACAACGACGTGAAGAATTTATAAGAAATCCAAAAGTTATCACCAACAAAACAGCTAAAGGAAAATACAAGTTTTTACAGAAGTACTTCCATCGGGGAGCTTTCTATGTTACTTCGTTGGAGGATAAAGTGTTTCAACAAGACTTTACACAGCCTACTCTGGAAGATCATTTTGACAAAACAAAGTTGCCTACTGTTATGCAGGTTAAGAACTTTGGTCGTGCTGGCCGGACTAAGTATACACATTTGGTTGATCAAGATACAACTGTATTCGACTCACCATGGTCAACAACCA                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD075389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCAGCACAACAAGAAAAGGCTGAAATTGAGCGAATTCGTAATATGACTGATGAACAACGACGTGAAGAATTTATAAGAAATCCAAAAGTTATCACCAACAAAACAGCTAAAGGAAAATACAAGTTTTTACAGAAGTACTTCCATCGGGGAGCTTTCTATGTTACTTCGTTGGAGGATAAAGTGTTTCAACAAGACTTTACACAGCCTACTCTGGAAGATCATTTTGACAAAACAAAGTTGCCTACTGTTATGCAGGTTAAGAACTTTGGTCGTGCTGGCCGGACTAAGTATACACATTTGGTTGATCAAGATACAACTGTATTCGACTCACCATGGTCAACAACCAATCCACAAAATATGAAGTTCCAGTCAACTCACGGTGGAGGATTTAAACAAATATTCTCGAAACCCGGTTTATCTAAACAGAAGAAAAAGACGGGATAGCACCTTGATTATGATAATTTGTACATATATTTAACGAAACAGCAAGTCAAATTTTCCTGTTTTCACTGATTTTCGTCTTTTTTATCCACAAGTATGTACACAGTTGATGCGAATAAATAATTCTGTTTATTTGAGAATTCATGTTCGGTGAATTTGTTGCTGATTATATACATTT]
[+] EMBL CD201792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGACGTGAATAATTTATAAGAAATCCAAAAGTTATCACCAACAAAACAGCTAAAGGAAAATACAAGTTTTTACAGAAGTACTTCCATCGGGGAGCTTTCTATGTTACTCCGATGGAGGATAAAGTGTTTCAACAAGACTTT                                                                                                                                                                                                                                                                                                                                                                                                                                     ]


>consensus_10450#0 AGCCATAATTCGCCGAGGTGTTTGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCAC CTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAAAGGCCAATTTTATA TGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGCTTCAAGCT CTAGTTCTGAGTCGGAAGAAGAACCAACTATCAATGAAGAGGCGTGAACTTATCCGTAAG AAAGCGTTGGCTGCTCAAATGAATGCTGAAGTAGAAAAACATTTTGGGGATGGATATAAC GATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGGTTATTCAGAAGAGGAGTAC ACGAGTTCAGATGATGAAGTTGCTCCTAAATTAAAACCAGTTTTCGTACGTGCACGTGAT CGAATAACGTTACAAGCTAAACATAAAGCAGACCAACTCGCTCAGGAGACCGAAGCAGAA ATTAAACGACTTGCAGAAGAACGTCGTAGAACAACACTTAAGCTACTAGAAGCAGAACTG CGCCGTGAAGCTGAAGAAGCTCACGCAATTGAAGATGCTCTTGACGCAATAGATTCTGAT GAAGGTCAAGGTAATCCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAA CTTAAACGTATTCGACGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAAGGCTGAA ATTGAGCGAATTCGTAATATGACTGATGAACAACGACGTGAAGAATTTATAAGAAATCCA AAAGTTATCACCAACAAAACAGCTAAAGGAAAATACAAGTTTTTACAGAAGTACTTCCAT CGGGGAGCTTTCTATGTTACTTCGTTGGAGGATAAAGTGTTTCAACAAGACTTTACACAG CCTACTCTGGAAGATCATTTTGACAAAACAAAGTTGCCTACTGTTATGCAGGTTAAGAAC TTTGGTCGTGCTGGCCGGACTAAGTATACACATTTGGTTGATCAAGATACAACTGTATTC GACTCACCATGGTCAACAACCAATCCACAAAATATGAAGTTCCAGTCAACTCACGGTGGA GGATTTAAACAAATATTCTCGAAACCCGGTTTATCTAAACAGAAGAAAAAGACGGGATAG CACCTTGATTATGATAATTTGTACATATATTTAACGAAACAGCAAGTCAAATTTTCCTGT TTTCACTGATTTTCGTCTTTTTTATCCACAAGTATGTACACAGTTGATGCGAATAAATAA TTCTGTTTATTTGAGAATTCATGTTCGGTGAATTTGTTGCTGATTATATACATTT



consensusID : consensus_10450#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 773
fasta sequence
                              [TGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCACCTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAAAGGTTTGGTAGAACCACATTACTAACTTTCAGGCCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGCTTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTATCAATGATACTGAAGAAATCAAGGCTTTTATGTCGCGGTCCGGGCTAATCAGAGATCGTTTCAGAGGGCAGGAGAACGCCAAATCGACAGTAGACGGTACTGACCAACCAACAGCTGAAGAGTTAGCTGACCCTAGATTCAGGAGATTGTTAAGAGCCAAGGATCAACTGAGCCAAAGCAGCGAGGATGAAGAAGAGACTGATAGGGTTACTCGTCACAAAAAATACCGAAAATCTGGTCATTATAGTGAGGAAAGTCCTCAAAACTCTAACGGAGAGGACGCTGACGAAGAGGACGTTGATGAAGCGGAACTAATGAAGAGGCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAATGAATGCTGAAGTAGAAAAACATTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGGTTATTCAGAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTANAAC-CAGTTTTCGTACGTGCACGTGATCGAATAACGTTACAAGCTAAACATANAGCAGACC]

[-] EMBL CD180805             [TGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCACCTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAAAGGTTTGGTAGAACCACATTACTAACTTTCAGGCCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGCTTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTATCAATGATACTGAAGAAATCAAGGCTTTTATGTCGCGGTCCGGGCTAATCAGAGATCGTTTCAGAGGGCAGGAGAACGCCAAATCGACAGTAGACGGTACTGACCAACCAACAGCTGAAGAGTTAGCTGACCCTAGATTCAGGAGATTGTTAAGAGCCAAGGATCAACTGAGCCAAAGCAGCGAGGATGAAGAAGAGACTGATAGGGTTACTCGTCACAAAAAAT                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD156696             [                                                                                                                                                                          CTGATTTTGCTTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTATCAATGATACTGAAGAAATCAAGGCTTTTACGTCGCGGTCCGGGCTAATCAGAGATCGTTTCAGAGGGCAGGAGAACGCCAAATCGACAGTAGACGGTACTGACCAACCAACAGCTGAAGAGTTAGCTGACCCTAGATTCAGGAGATTGTTAAGAGCCAAGGATCAACTGAGCCAAAGCAGCGAGGATGAAGAAGAGACTGATAGGGTTACTCGTCACAAAAAATACCGAAAATCTGGTCATTATAGTGAGGAAAGTCCTCAAAACTCTAACGGAGAGGACGCTGACGAAGAGGACGTTGATGAAGCGGAACTAATGAAGAGGCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAATGAATGCTGAAGTAGAAAAACATTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGGTTATTCAGAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTANAAC CAGTTTTCGTACGTGCACGTGATCGAATAACGTTACAAGCTAAACATANAGCAGACC]
[-] EMBL CD094732             [                                                                                                                                                                                                                                                                         ATCAGAGATCGTTTCAGAGGGCAGGAGAACGCCAAATCGACAGTAGACGGTACTGACCAACCAACAGCTGAAGGGTTAGCTGACCCTAGATTCAGGAGATTGTTAAGAGCCAAGGATCAACTGAGCCAAAGCAGCGAGGATGAAGAAGAGACTGATAGGGTTACTCGTCACAAAAAATACCGAAAATCTGGTCATTATAGTGAGGAAAGTCCTCAAAACTCTAACGGAGAGGACGCTGACGAAGAGGACGTTGATGAAGCGGAACTAATGAAGAGGCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAATGAATGCTGAAGTAGAAAAACATTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGGTTATTCAGAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTAAAAC CAGTTTTCGTACGTGCACGTGATCGAATAACGTTACAAGCTAAACATAAAGCAG   ]
[-] EMBL CD066021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                      AAAATACCGAAAATCTGGTCATTATAGTGAGGAAAGTCCTCAAAACTCTAACGGAGAGGACGCTGACGAAGAGGACGTTGA GAAGCGGAACTAAT AAGAGG                                                                                                                                                                                                                                         ]
[+] EMBL CD149563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATGAAGCGGAACTAATGAAGAGGCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAATGAATGCTGAAGTANAAAAACATTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGGTTATTCACAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTAGAACGCAGat                                                    ]


>consensus_10450#1 TGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCACCTCAGATTCATTCGACTGCGGG CGCAGTACCTGTTAAAAATGAAAAAGGTTTGGTAGAACCACATTACTAACTTTCAGGCCA ATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGC TTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTATCAATGATACTGAAGAAATCAA GGCTTTTATGTCGCGGTCCGGGCTAATCAGAGATCGTTTCAGAGGGCAGGAGAACGCCAA ATCGACAGTAGACGGTACTGACCAACCAACAGCTGAAGAGTTAGCTGACCCTAGATTCAG GAGATTGTTAAGAGCCAAGGATCAACTGAGCCAAAGCAGCGAGGATGAAGAAGAGACTGA TAGGGTTACTCGTCACAAAAAATACCGAAAATCTGGTCATTATAGTGAGGAAAGTCCTCA AAACTCTAACGGAGAGGACGCTGACGAAGAGGACGTTGATGAAGCGGAACTAATGAAGAG GCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAATGAATGCTGAAGTAGAAAAACA TTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGAAGCGGAGGATGAATTGGG TTATTCAGAAGAGGAGTACACGAGTTCAGATGATGAAGTTGCTCCTAAATTANAACCAGT TTTCGTACGTGCACGTGATCGAATAACGTTACAAGCTAAACATANAGCAGACC



consensusID : consensus_10450#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 242
fasta sequence
                              [GCAAAATGCACCTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAGAGGCCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGCTTCAAGCCCTAGTTCTGAGTCGGAAGAAGAGCCAACTATCAATGATACTGAAGAAATCAAGGCTTTTACGTCGCGGTCCGGGCTAATCAGAGATCGTTTCAGAGGGCAGGAGAACGCCA]

[-] EMBL CD119468             [GCAAAATGCACCTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAGAGGCCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTTTGCTTCAAGCCCTAGTTCTGAGTCGGAAGAAGAGCCAACTATCAATGATACTGAAGAAATCAAGGCTTTTACGTCGCGGTCCGGGCTAATCAGAGATCGTTTCAGAGGGCAGGAGAACGCCA]


>consensus_10450#2 GCAAAATGCACCTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAGAGG CCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTGCCGGGAAGAAACCTGATTT TGCTTCAAGCCCTAGTTCTGAGTCGGAAGAAGAGCCAACTATCAATGATACTGAAGAAAT CAAGGCTTTTACGTCGCGGTCCGGGCTAATCAGAGATCGTTTCAGAGGGCAGGAGAACGC CA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10450#1      ----------------------TGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCAC 38
consensus_10450#2      -------------------------------------------------GCAAAATGCAC 11
consensus_10450#0      AGCCATAATTCGCCGAGGTGTTTGGTGGTGTTTTGATGATGCAAAGCTTGCAAAATGCAC 60
                                                                        ***********

consensus_10450#1      CTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAAAGGTTTGGTAGAAC 98
consensus_10450#2      CTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAGAGG----------- 60
consensus_10450#0      CTCAGATTCATTCGACTGCGGGCGCAGTACCTGTTAAAAATGAAAAAGG----------- 109
                       ********************************************* ***           

consensus_10450#1      CACATTACTAACTTTCAGGCCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTG 158
consensus_10450#2      -------------------CCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTG 101
consensus_10450#0      -------------------CCAATTTTATATGGTAAAGGTTAAGGTTCAGCGCTACGTTG 150
                                          *****************************************

consensus_10450#1      CCGGGAAGAAACCTGATTTTGCTTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTA 218
consensus_10450#2      CCGGGAAGAAACCTGATTTTGCTTCAAGCCCTAGTTCTGAGTCGGAAGAAGAGCCAACTA 161
consensus_10450#0      CCGGGAAGAAACCTGATTTTGCTTCAAGCTCTAGTTCTGAGTCGGAAGAAGAACCAACTA 210
                       ***************************** ********************** *******

consensus_10450#1      TCAATGATACTGAAGAAATCAAGGCTTTTATGTCGCGGTCCGGGCTAATCAGAGATCGTT 278
consensus_10450#2      TCAATGATACTGAAGAAATCAAGGCTTTTACGTCGCGGTCCGGGCTAATCAGAGATCGTT 221
consensus_10450#0      TCAATGA----AGAGGCGTGAACTTATCCGTAAGAAAGCGTTGGCTGCTCAAA--TGAAT 264
                       *******      **   * **    *          *    ****  *** *  *   *

consensus_10450#1      TCAGAGGGCAGGAGAACGCCAAATCGACAG-TA-GACGGTACTGACCAACCAACAGCTGA 336
consensus_10450#2      TCAGAGGGCAGGAGAACGCCA--------------------------------------- 242
consensus_10450#0      GCTGAAG-TAGAAAAACATTTTGGGGATGGATATAACGATACTGGTCACGAAGACGTGGA 323
                        * ** *  ** * ***                                           

consensus_10450#1      AGAGTTAGCTGACCCTAG--ATTCAGGAGATTGTTAAGAGCCAAGGATCAACTGAGCCAA 394
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      AGCGGAGGATGAATTGGGTTATTCAGAAGAG----GAGTACACGAGTTCAGATGATGAAG 379
                                                                                   

consensus_10450#1      A-GCAGCGAGGATGAAGAAGAGACTGATAGGGTTACTCGTCACAAAAAATACCGAAAATC 453
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      TTGCTCCTAAATTAAAACCAGTTTTCGTACG--TGCACGTGATCGAATAACGTTACAAGC 437
                                                                                   

consensus_10450#1      TGGTCATTATAGTGAGGAAAGTCCTCAAAACTCTAACGGAGAGG----ACGCTGACGAAG 509
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      TAAACATAAAGCAGACCAACTCGCTCAGGAGACCGAAGCAGAAATTAAACGACTTGCAGA 497
                                                                                   

consensus_10450#1      AGGACGTTGATGAAGCGGAACTAATGA----AGAGGCGTGAACTTATCCGTAAGAAAGCG 565
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      AGAACGTCG-TAGAACAACACTTAAGCTACTAGAAGCA-GAACTGCGCCGTGAAGCTGAA 555
                                                                                   

consensus_10450#1      TTGGCT-GCTCAAATGAA--TGCTGAAGTAGAAAAACATTTTGGGGATGGATATAACGAT 622
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      GAAGCTCACGCAATTGAAGATGCTCTTGACGCAATAGATTCTGATGAAGGTCAAGGTAAT 615
                                                                                   

consensus_10450#1      ACTGGTCACGAAGACGTGGAA-GCGGAGGATGAA---TTGGGTTATTCAGAAGAGGAGTA 678
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      CCTCAAGCGGAACAAGAGGAATATGAAAAATGGAAGGTTAGGGAACTTAAACGTATTCGA 675
                                                                                   

consensus_10450#1      CACGAGT-TCAGATG-ATGAAGTTGCTCCTAAATTANAACCAGTTTTCGTACGTGCACGT 736
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      CGAGAACGTGAGATTCGGGAGGCAGCACAACAAGAAAAGGCTGAAATTGAGCGAATTCGT 735
                                                                                   

consensus_10450#1      GAT-CGAATAACG-----TTACAAGCTAAACATANAGCAGACC----------------- 773
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      AATATGACTGATGAACAACGACGTGAAGAATTTATAAGAAATCCAAAAGTTATCACCAAC 795
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      AAAACAGCTAAAGGAAAATACAAGTTTTTACAGAAGTACTTCCATCGGGGAGCTTTCTAT 855
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      GTTACTTCGTTGGAGGATAAAGTGTTTCAACAAGACTTTACACAGCCTACTCTGGAAGAT 915
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      CATTTTGACAAAACAAAGTTGCCTACTGTTATGCAGGTTAAGAACTTTGGTCGTGCTGGC 975
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      CGGACTAAGTATACACATTTGGTTGATCAAGATACAACTGTATTCGACTCACCATGGTCA 1035
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      ACAACCAATCCACAAAATATGAAGTTCCAGTCAACTCACGGTGGAGGATTTAAACAAATA 1095
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      TTCTCGAAACCCGGTTTATCTAAACAGAAGAAAAAGACGGGATAGCACCTTGATTATGAT 1155
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      AATTTGTACATATATTTAACGAAACAGCAAGTCAAATTTTCCTGTTTTCACTGATTTTCG 1215
                                                                                   

consensus_10450#1      ------------------------------------------------------------
consensus_10450#2      ------------------------------------------------------------
consensus_10450#0      TCTTTTTTATCCACAAGTATGTACACAGTTGATGCGAATAAATAATTCTGTTTATTTGAG 1275
                                                                                   

consensus_10450#1      ----------------------------------------
consensus_10450#2      ----------------------------------------
consensus_10450#0      AATTCATGTTCGGTGAATTTGTTGCTGATTATATACATTT 1315
                                                               




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)