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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10451#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1061 fasta sequence
[CGGACGCATCACGAAGAGCGGGAAAGACTAATAAATGAATTGAGAAAGAAATGCTTTATAATCCAACCACACATAGAGAAAAGTTAAATTCAGAGCTTCGTTTAAGACTTATGTATGATAGGTATTTTGATGTAACACAAGAACTAAGAGATCTGTATGAAGATAAAGATGGTCTACGTAAGGCTGATATACAAACACTTTCCGGTCCAAATGAATTTAACGAGTTTTATGACAGATTAAAGCAAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA-GAAATATCTG-AATGTAAAAGGTGTTCCA----CGCATAGATTATCTCACTTATATCTCCTTCTT----CGACCGATTGTATGATATATC-TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA-GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACAGCCTGGGAAGAACTTGCTTCACTTGGACTTGATAGGCTTAAATCAGCGTTACTCGCGTTGGGCTTAAAATGTGGTGGAACTTTGGAGGAAAGAGCTCGTCGCTTATGGGCTACAAAAGGGAAATCACTCGAAGAGTTACCTGCAGATCTGTTTGTTACAAAACAACGCTCGACTAAAGGTTTCGCTAAGACAGCTGCATGGGGACATGTACCTCCAGCGCTATCTGAAAAGCTAAAAGAAATTGCTACGCTAGAGGCTAGGATATATAGACTCAGTGAACTGGTCAAAGAGCATCGCGAAGCTACTATTGAGAACGTACAACGTCGTCAGGCACGA]
[+] EMBL CD064072 [CGGACGCATCACGAAGAGCGGGAAAGACTAATAAATGAATTGAGAAAGAAATGCTTTATAATCCAACCACACATAGAGAAAAGTTAAATTCAGAGCTTCGTTTAAGACTTATGTATGATAGGTATTTTGATGTAACACAAGAACTAAGAGATCTGTATGAAGATAAAGATGGTCTACGTAAGGCTGATATACAAACACTTTCCGGTCCAAATGAATTTAACGAGTTTTATGACAGATTAAAGCAAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTCTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AAT ]
[+] EMBL CD115289 [ TAAAGCAAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACAGCCTGGGAAGAACTTGCTTCACTTGGACTTGATAGGCTTAAATCAGCGTTACTCGCGTTGGGCTT ]
[+] EMBL CD087165 [ AAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTAACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCAGTAGCGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATTAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCCAGACCTATAGTGGATTTAGAATA GGAAACTAAAGATGCGCTTGCTAAATTTGAAAAACAATGG ]
[+] EMBL CD087160 [ AAATTAAAGAATTTCATCGCAAGCACCCTGGCGAGATATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTAACTTTTCAGATGAACAAGGCTATGGTCGTTATCTGGATTTACATaaggg ]
[-] EMBL CD097686 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTCCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ]
[-] EMBL CD097681 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ]
[-] EMBL CD097707 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAGAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ]
[-] EMBL CD097735 [ TATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ]
[+] EMBL CD068867 [ ATGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCT AATTTGAAA ]
[-] EMBL CD097739 [ tgTGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAA TTACCTCGAA ]
[-] EMBL CD097740 [ tgTGTGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAAGGACATATCTGCAATGTGAAAGGTGTTCCA CGCATAGATTAT ]
[+] EMBL CD068919 [ TGTCCCAATGTCTGCCGAGTTTGAAAAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCCTTAAATATATCACATATATCTCCTTCTTCNNCCGACCGATTGTATGATATATCNTCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCNAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCANCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTAANCCGt ]
[+] EMBL CD165592 [ AAGTACAAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGACGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCA CGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCATGACAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACAGCCTGGGAAGAACTTGCTTTACTTGGACTTGATAGGCTTAAATCAGCGTTAC ]
[+] EMBL CD183003 [ AAAGAAATGAGAGAAAGACCGGAAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCAGTAGCGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCCAGACCTATAGTGGATTTAGAAGAGGGAAACT AAGAGGCGCTT ]
[-] EMBL CD183071 [ AAGAAATGAGAGAAAGNNCCGCAGAAGCAAATGCTGTACTTATTGACTTTTCAGATGAAGAAGGCTATGGTCGTTATCTGGATTTACATGATGTGTATAA GAAATATCTG AATGTAAAAGGTGTTCCAGTAGCGCATAGATTATCTCACTTATATCTCCTTCTT CGACCGATTGTATGATATATC TCGTGATAAAAAAGGAATAGCATATAAAGCTTACCTCGAAGAGTTGCTTGGCTATCTTGAAAATTTCGTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTG ]
[+] EMBL CD153894 [ GTATCGCGTGCAAGACCTATAGTGGATTTAGAAGA GGAAACTAAAGAGGCGCTTGCTAAATTTGAAACACAATGGACTCAAGGAGCGTTTCCTGGTTGGGGTCGTGAGGCAGCATCTGCCTTAGCGCATGGTGGTGCTCATTTGGACTTAACCGCTTTTACGGCCTGGGAAGAACTTGCTTCACTTGGACTTGATAGGCTTAAATCAGCGTTACTCGCGTTGGGCTTAAAATGTGGTGGAACTTTGGAGGAAAGAGCTCGTCGCTTATGGGCTACAAAAGGGAAATCACTCGAAGAGTTACCTGCAGATCTGTTTGTTACAAAACAACGCTCGACTAAAGGTTTCGCTAAGACAGCTGCATGGGGACATGTACCTCCAGCGCTATCTGAAAAGCTAAAAGAAATTGCTACGCTAGAGGCTAGGATATATAGACTCAGTGAACTGGTCAAAGAGCATCGCGAAGCTACTATTGAGAACGTACAACGTCGTCAGGCACGA]
clustalw multiple alignements is not computed in this case |
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||