cluster # 10452

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Schistosoma mansoni
cluster # 10452 cluster # 10452 Sequences # 16 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10452#0 length = 2255 sequences # 12

consensus_10452#1 length = 617 sequences # 4

consensusID : consensus_10452#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2255
fasta sequence

                              [CGAGCTCGGCACCCATATGCATATCATCGGGATCTGTAGATTGTGAAGATGAAACTAATATGGATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAAAATAGTAAACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAAAAAGCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAGTTAATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTCGATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGGATGGTACTTCAACGAATGTCAGGTAGTGAACCAAGGCTGGAAGAAAACAGTCAGGCGGAAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTATTACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGACCATTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGACTTTATTTCATGCATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATCAAGTTGATGCAGTCGCTCATGCTTTAGGTCGTTTCATCCCTCGATTTTTTTCATGTACATACTGTGCATTTCATTTTGCACTGAATACAGCAAACTTAGCAAGACCAGGGGAATCTATCTTACCGGAAAATCGTGTCACTCCTAATTCAAATGAATTTGTATTTGATGAATCAGTTATTCCTACTTTGCCTAAAGCTCCAGAGACTCCTAGAGATACTGTTTTATGGTTGAACGCAGTACATAATCGTGTAAATAAACGTTTAGCTGGTCAACCATCGGAAGATCCAACTGCACCTAAAGTTCAATTCCCACCGTCTTATCTGTGTCCTACCTGTTGGTCACATAGTTCAACAGGTGAATTGGAATTAGGTAAAACTCCAGAGACCGAAGAATCATTATTTCAATTTCTTGTTGAACGATATCGTGCATCATCTTGGAAGTATGTGGATTTACCTACAGTATTCATAACCAATGCTGTGGAATTGAAAACTGAACAACCAGTTCCTGATCTGTTAATAATATCCATTATTTCCGTTGTACTTACAATATTAGCAGCTGTCATTNTACTTGCTGGCTTACATNTTC-TGT---GTCGTCGTAGATTGTTCCGTCGAAGACGAGGACAGTATGCAGGTGGACAGTCAGTCTAAATATAATTTATTAATATTACGAAACAAAAAAATTAACAACGATAATTTTCGAAGATTTATTTTTTGTGAATAATTAATGAATAAAAACTTTGATCCTTCTGTTTTTCAAAGTAATTTTTGCGACTTTCCCTTTTTTATGAACATTAAACTGACTTTGTTGAACTACTATTATTTTCCATTACTTATTAATCATTTTTATTATTCTATTCTTATTTCTTACAGCTTTTTTGTCTATTTCGATTTACGCTTAAATATCATGGCACTCTGTTTTGGTAGTTTGCTGTTCTCCCCCTCTTTTCCCCAATTCTTTGTTTCTTTCTTCTATATATGGAATAGACTGCTTAGAATATATAAATAATTAAACATTAGGGATCACTAATTTGTATCACTGCTATTATTTTTGTTTTCAATGATCGTATCCTCATAAATAACTTCAAAGGGTTGTATTTGAACATTGTTTTCTTTAGATATATACATGTATTCCTTTCTTTTGTTTTTGAAAGTTTATCAACTTGTTGCATTTTGTTTTAATGTACTGTATTTTTCCACATGATAGTTTCCCTTTTTTTAAATATTACCTTAACGTCTTCCATAATTTATTTTGTTTGTGTGTATGTAGTCGTGGTTTTTTCCAACAACTCCAATTGATCAATCATTTGTTCTATCTCAATACTTTATCCAGTTTACTTTAATCAATAAAACAATGTT]

[+] EMBL CD062712             [CGAGCTCGGCACCCATATGCATATCATCGGGATCTGTAGATTGTGAAGATGAAACTAATATGGATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAAAATAGTAAACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAAAAAGCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAATTAATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCGGGATTAACGGAAGTCGATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAAGATGGTACTTCAACGAATGTCAGGTAGTGAACCAAGGCTGGAAGAAAACAGTCAGGCGGAAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGCTGATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGA GGACCGGCCTTAGAAGCTC TAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD199190             [                                                     ACTAATATGGATTTGTGCTGTCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCTCGAAAAATAGTAAACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACCTGACATTACTGAGAAAAAGCATTGTCTCCAAGTTAGTAAATGTTTCTACTCTTCAGCTTCCAAGGGACTTAGCAGTTAATGATGCAATAGTTGTTACAGGTAGCGATATGGAAGTAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI977279             [                                                                                                                                                                                                CTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAGTTAATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTCGATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGGATGGTACTTCAACGAATGTCAGGTAGTGAACCAAGGCTGGAAGAAAACAGTCAGGCGGAAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGGTTTGTTAAATTCTAAAACAAGTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD129351             [                                                                                                                                                                                                                                                                                              TCTGCTGATACTGGATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTCGATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGGATGGTACTTCAACGAATGTCAGGTAGTGAACCAAGGCTGGAAGAAAACAGTCAGGCGGAAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTATTACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGACCATTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGACTTTATTTCATGCATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATCAAGTTGATGCAGTCGCTCATGCTTTAGGTCGNTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CD169699             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTATTACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGACCATTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGACTTTATTTCATGCATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATCAAGTTGATGCAGTCGCTCATGCTTTAGGTCGTTTCATCCCTCGATTTTTTTCATGTACATACTGTGCATTTCATTTTGCACTGAATACAGCAAACTTAGCAAGACCAGGGGAATCTATCTTACCGGAAAATCGTGTCACTCCTAATT AAATGAATTTGTATTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD169094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTATTACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGACCATTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGACTTTATTTCATGCATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATCAAGTTGATGCAGTCGCTCATGCTTTAAGTCGTTTCATCCCTCGATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD168974             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTATTACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGACCATTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGACTTTATTTCATGCATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATCAAGTTGATGCAGTCGCTCATGCTTTAGGTCGTTTCATCCCTCGATTTTTTTCATGTACATACTGTGCATTTCATTTTGCACTGAATACAGCAAACTTAGCAAGACCAGGGGAATCTATCTTACCGGAAAATCGTGTCACTCCTAATTCAAATGAATTTGTATTTGATGAATCAGTTATTCCTACTTTGCCTAAAGCTCCAGAGACTCCTAGAGATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD188884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GATGTCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTATTACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGACCATTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGACTTTATTTCATGCATTAACCGTAGAGCAATACCTGTTATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD080454             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  aggATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATCAAGTTGATGCAGTCGCTCATGCTTTAGGTCGTTTCATCCCTCGATTTTTTTCATGTACATACTGTGCATTTCATTTTGCACTGAATACAGCAAACTTAGCAAGACCAGGGGAATCTATCTTACCGGAAAATCGTGTCACTCCTAATTCAAATGAATTTGTATTTGATGAATCAGTTATTCCTACTTTGCCTAAAGCTCCAGAGACTCCTAGAGATACTGTTTTATGGTTGAACGCAGTACATAATCGTGTAAATAAACGTTTAGCTGGTCAACCATCGGAAGATCCAACTGCACCTAAAGTTCAATTCCCACCGTCTTATCTGTGTCCTACCTGTTGGTCACATAGTTCAACAGGTGAATTGGAATTAGGTAAAACTCCAGAGACCGAAGAATCATTATTTCAATTTCTTGTTGAACGATATCGTGCATCATCTTGGAAGTATGTGGATTTACCTACAGTATTCATAACCAATGCTGTGGAATTGAAAACTGAACAACCAGTTCCTGATCTGTTAATAATATCCATTATTTCCGTTGTACTTACAATATTAGCAGCTGTCATTNTACTTGCTGGCTTACATNNTC TGT   G                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD202114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tgTTTATGGTTGAACGCAGTACATAATCGTGTANATAAACGTTTAGCTGGTCAACCCTCGGAAGATCCAACTGCACCTAAAGTTCAATTCCCACCGTCTTATCTGTGTCCTACCTGTTGGTCACATAGTTCAACAGGTGAATTGGAATTAGGTAAAACTCCAGAGACCGAAGAATCATTATTTCAATTTCTTGTTGAACGATATCGTGCATCATCTTGGAAGTATGTGGATTTACCTACAGTATTCATAACCAATGCTGTGGAATTGAAAACTGAACAACCAGTTCCCGATCTGTTAATAATATCCATTATTTCCGTTGTACTTACAATATTAGCAGCTGTCATTTTACTTGCTGGCTTACAT TTCTTGT   GTCGTCGTAGATTGTTCCGTCGAAGACGAGGACAGTATGCAGGTGGACAGTCAGTCTAAATATAATTTATTAATATTACGAAACAAAAAAATTAACAACGATAATTTTCGAAGATTTATTTTTTGTGAATAATTAATGAATAAAAACTTTGATCCTTCTGTTTTTCAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD168333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         gCTTG  GGCTTACATTTCC TGTGTCGTCGTCGTAGATTGTTCCGTCGAAGACGAGGACAGTATGCAGGTGGACAGTCAGTCTAAATATAATTTATTAATATTACGAAACAAAAAAATTAACAACGATAATTTTCGAAGATTTATTTTTTGTGAATAATTAATGAATAAAAACTTTGATC   CTGTTTTTCGAAGTAATTTTTGCGACTTTCCCTTTTTTATGAACATTAAACTGACTTTGTTGAACTACTATTATTTTCCATTACTTATTAATCATTTTTATTATTCTATTCTTATTTCTTACAGCTTTTTTGTCTATTTCGATTTACGCTTAAATATCATGGCACTCTGTTTTGGTAGTTTGCTGTTCTCCCCCTCTTTTCCCCAATTCTTTGTTTCTTTCTTCTATATATGGAATAGACTGCTTAGAATATATAAATAATTAAACATTAGGGATCACTAATTTGTATCACTGCTATTATTTTTGTTTTCAATGA                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD074366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ATTAATGAATAAAAACTTTGATCCTTCTGTTTTTCAAAGTAATTTNTGCGACTTTCCCTTTTTTATGAACATTAAACTGACTTTGTTGAACTACTATTATTTTCCATTACTTATTAATCATTTTTATTATTCTATTCTTATTTCTTACAGCTTTTTTGTCTATTTCGATTTACGCTTAAATATCATGGCACTCTGTTTTGGTAGTTTGCTGTTCTCCCCCTCTTTTCCCCAATTCTTTGTTTCTTTCTTCTATATATGGAATAGACTGCTTAGAATATATAAATAATTAAACATTAGAGATCACTAATTTGTATCACTGCTATTATTTTTGTTTTCAATGATCGTATCCTCATAAATAACTTCAAAGGGTTGTATTTGAACATTGTTTTCTTTAGATATATACATGTATTCCTTTCTTTTGTTTTTGAAAGTTTATCAACTTGTTGCATTTTGTTTTAATGTACTGTATTTTTCCACATGATAGTTTCCCTTTTTTTAAATATTACCTTAACGTCTTCCATAATTTATTTTGTTTGTGTGTATGTAGTCGTGGTTTTTTCCAACAACTCCAATTGATCAATCATTTGTTCTATCTCAATACTTTATCCAGTTTACTTTAATCAATAAAACAATGTT]




>consensus_10452#0
CGAGCTCGGCACCCATATGCATATCATCGGGATCTGTAGATTGTGAAGATGAAACTAATA
TGGATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGA
AAAATAGTAAACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAA
AAAGCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAG
TTAATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGG
ATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAG
TCGATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTA
GGATGGTACTTCAACGAATGTCAGGTAGTGAACCAAGGCTGGAAGAAAACAGTCAGGCGG
AAGTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATG
TCTATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGG
GACCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTT
CTCAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTA
TTACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGAC
CATTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGA
CTTTATTTCATGCATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATC
AAGTTGATGCAGTCGCTCATGCTTTAGGTCGTTTCATCCCTCGATTTTTTTCATGTACAT
ACTGTGCATTTCATTTTGCACTGAATACAGCAAACTTAGCAAGACCAGGGGAATCTATCT
TACCGGAAAATCGTGTCACTCCTAATTCAAATGAATTTGTATTTGATGAATCAGTTATTC
CTACTTTGCCTAAAGCTCCAGAGACTCCTAGAGATACTGTTTTATGGTTGAACGCAGTAC
ATAATCGTGTAAATAAACGTTTAGCTGGTCAACCATCGGAAGATCCAACTGCACCTAAAG
TTCAATTCCCACCGTCTTATCTGTGTCCTACCTGTTGGTCACATAGTTCAACAGGTGAAT
TGGAATTAGGTAAAACTCCAGAGACCGAAGAATCATTATTTCAATTTCTTGTTGAACGAT
ATCGTGCATCATCTTGGAAGTATGTGGATTTACCTACAGTATTCATAACCAATGCTGTGG
AATTGAAAACTGAACAACCAGTTCCTGATCTGTTAATAATATCCATTATTTCCGTTGTAC
TTACAATATTAGCAGCTGTCATTNTACTTGCTGGCTTACATNTTCTGTGTCGTCGTAGAT
TGTTCCGTCGAAGACGAGGACAGTATGCAGGTGGACAGTCAGTCTAAATATAATTTATTA
ATATTACGAAACAAAAAAATTAACAACGATAATTTTCGAAGATTTATTTTTTGTGAATAA
TTAATGAATAAAAACTTTGATCCTTCTGTTTTTCAAAGTAATTTTTGCGACTTTCCCTTT
TTTATGAACATTAAACTGACTTTGTTGAACTACTATTATTTTCCATTACTTATTAATCAT
TTTTATTATTCTATTCTTATTTCTTACAGCTTTTTTGTCTATTTCGATTTACGCTTAAAT
ATCATGGCACTCTGTTTTGGTAGTTTGCTGTTCTCCCCCTCTTTTCCCCAATTCTTTGTT
TCTTTCTTCTATATATGGAATAGACTGCTTAGAATATATAAATAATTAAACATTAGGGAT
CACTAATTTGTATCACTGCTATTATTTTTGTTTTCAATGATCGTATCCTCATAAATAACT
TCAAAGGGTTGTATTTGAACATTGTTTTCTTTAGATATATACATGTATTCCTTTCTTTTG
TTTTTGAAAGTTTATCAACTTGTTGCATTTTGTTTTAATGTACTGTATTTTTCCACATGA
TAGTTTCCCTTTTTTTAAATATTACCTTAACGTCTTCCATAATTTATTTTGTTTGTGTGT
ATGTAGTCGTGGTTTTTTCCAACAACTCCAATTGATCAATCATTTGTTCTATCTCAATAC
TTTATCCAGTTTACTTTAATCAATAAAACAATGTT

consensusID : consensus_10452#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 617
fasta sequence

                              [ATATTTCTCCGAACGATTCACAGCCTTCCCTACAGTCAAATAGAAGGTGTTACCGTCCTGCATCCTGGAAATTTCGACAACAAAACATCTGAAGGAAATTGGCTTGTGGTTTTTTATCGCAAGTCTTGTGGACACTGTATAAGCTACTCTGAACCTTTTTCACAGTTTTGCCGGTCTGTAAAGAATTGGAATTGGGTACTTCATCTTGGATCTGTAGATTGTGAAGATGAAACTAATATGGATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAAAATAGT-A-ACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAAAAAGCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAGTTAATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTCGATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGGATGGTACTTCAACGAATG]

[+] EMBL AI975507             [ATATTTCTCCGAACGATTCACAGCCTTCCCTACAGTCAAATAGAAGGTGTTACCGTCCTGCATCCTGGAAATTTCGACAACAAAACATCTGAAGGAAATTGGCTTGTGGTTTTTTATCGCAAGTCTTGTGGACACTGTATAAGCTACTCTGAACCTTTTTCACAGTTTTGCCGGTCTGTAAAGAATTGGAATTGGGTACTTCATCTTGGATCTGTAGATTGTGAAGATGAAACTAATATGGATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAAAATAGTAA ACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAAAAAGCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAGTTAATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTCGATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGGATGGTACTTCAACGAATG]
[+] EMBL CD199203             [                                                           GCATCCTGGAAATTTCGACAACAAAACATCTGAAGGAAATTGGCTTGTGGTTTTTTATCGCAAGTCTTGTGGACACTGTATAAGCTACTCTGAACCTTTTTCACAGTTTTGCCGGTCTGTAAAGAATTGGAATTGGGTACTTCATCTTGGATCTGTAGATTGTGAAGATGANACTAATATGGATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAAAATAGT A AC AATGTCTGGAGAAA TTCAGCTGAGCG AACGT                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD199193             [                                                           GCATCCTGGAAATTTCGACAACAAAACATCTGAAGGAAATTGGCTTGTGGTTTTTTATCGCAAGTCTTGTGGACACTGTATAAGCTACTCTGGACCTTTTTCACAGTTTTGCCGGTCTGTAAAGAATTGGAATTGGGTACTTCATCTTGGATCTGTAGATTGTGAAGATGAAACTAATATGGATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAAAATAGT ANACAAATGTCTGGAG                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD187786             [                                                                                                                                                                                                                                                                                                                                                                                                                         GACTTAGCAGTTAATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGATTATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTCGATGTCAG                                                                      ]




>consensus_10452#1
ATATTTCTCCGAACGATTCACAGCCTTCCCTACAGTCAAATAGAAGGTGTTACCGTCCTG
CATCCTGGAAATTTCGACAACAAAACATCTGAAGGAAATTGGCTTGTGGTTTTTTATCGC
AAGTCTTGTGGACACTGTATAAGCTACTCTGAACCTTTTTCACAGTTTTGCCGGTCTGTA
AAGAATTGGAATTGGGTACTTCATCTTGGATCTGTAGATTGTGAAGATGAAACTAATATG
GATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAA
AATAGTAACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAAAAA
GCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAGTTA
ATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGATT
ATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTCG
ATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGGA
TGGTACTTCAACGAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10452#0      ------------------------------------------------------------
consensus_10452#1      ATATTTCTCCGAACGATTCACAGCCTTCCCTACAGTCAAATAGAAGGTGTTACCGTCCTG 60
                                                                                   

consensus_10452#0      ------------------------------------------------------------
consensus_10452#1      CATCCTGGAAATTTCGACAACAAAACATCTGAAGGAAATTGGCTTGTGGTTTTTTATCGC 120
                                                                                   

consensus_10452#0      ------------------------------------------------------CGAGCT 6
consensus_10452#1      AAGTCTTGTGGACACTGTATAAGCTACTCTGAACCTTTTTCACAGTTTTGCCGGTCTGTA 180
                                                                                *  

consensus_10452#0      CGGCACCCATAT---GCATATCATCG-GGATCTGTAGATTGTGAAGATGAAACTAATATG 62
consensus_10452#1      AAGAATTGGAATTGGGTACTTCATCTTGGATCTGTAGATTGTGAAGATGAAACTAATATG 240
                         * *     **   * *  *****  *********************************

consensus_10452#0      GATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAA 122
consensus_10452#1      GATTTGTGCTATCGTTTCAAAGTACAAGGAGTTCCCACCCTTAGGTTTCTATTCACGAAA 300
                       ************************************************************

consensus_10452#0      AATAGTAAACAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAAAA 182
consensus_10452#1      AATAGTAA-CAAATGTCTGGAGAAATTTCAGCTGAGCGAAACGTGACATTACTGAGAAAA 359
                       ******** ***************************************************

consensus_10452#0      AGCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAGTT 242
consensus_10452#1      AGCATTGTCTCTAAGTTAGTAAATGTTTCTACTCTTCAACTCCCAAGGGACTTAGCAGTT 419
                       ************************************************************

consensus_10452#0      AATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGAT 302
consensus_10452#1      AATGATCCAATAGTTGTTACAGGTAGCGATATGGAAGTAAACTCTCTGCTGATACTGGAT 479
                       ************************************************************

consensus_10452#0      TATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTC 362
consensus_10452#1      TATAGTGCCCCTCTGAAACGAGAGATCCAAAGCGCTATAATACCAGGATTAACGGAAGTC 539
                       ************************************************************

consensus_10452#0      GATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGG 422
consensus_10452#1      GATGTCAGGAATCGTCGTTCCGGTGAAGTAATTGTCAGGGGTCCTGAGGAACAGGTTAGG 599
                       ************************************************************

consensus_10452#0      ATGGTACTTCAACGAATGTCAGGTAGTGAACCAAGGCTGGAAGAAAACAGTCAGGCGGAA 482
consensus_10452#1      ATGGTACTTCAACGAATG------------------------------------------ 617
                       ******************                                          

consensus_10452#0      GTGGATGTTAAAACAACACCAATCCAAATTAAATATCCACCGGTTTACGCAGTTGATGTC 542
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TATCGGTCACTAAGTATGCTACTACAGTCTGACGTTGGTGCACGTGATAAAATTGAGGGA 602
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      CCGGCCTTAGAAGCTCTTAAAGAATTTTTGGACATATTATATGGGATTCTTCCGGCTTCT 662
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      CAGGAATATAAAGCTTACCTGTCCGAAATTTCTGTTTGGTTAAATTCTAAAACAAGTATT 722
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      ACGGGTCAAGAATGGGTTGCGTATCTTGAAAAAATCCAATTCCCTTTATATAAAGGACCA 782
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TTTATAGCGTGTAATGGAAGTAAACCACATTTTAGAGGATATCCATGCGGTTTATGGACT 842
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TTATTTCATGCATTAACCGTAGAGCAATACCTGTTATCGTCCTCCAGTCCAGATAATCAA 902
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      GTTGATGCAGTCGCTCATGCTTTAGGTCGTTTCATCCCTCGATTTTTTTCATGTACATAC 962
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TGTGCATTTCATTTTGCACTGAATACAGCAAACTTAGCAAGACCAGGGGAATCTATCTTA 1022
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      CCGGAAAATCGTGTCACTCCTAATTCAAATGAATTTGTATTTGATGAATCAGTTATTCCT 1082
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      ACTTTGCCTAAAGCTCCAGAGACTCCTAGAGATACTGTTTTATGGTTGAACGCAGTACAT 1142
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      AATCGTGTAAATAAACGTTTAGCTGGTCAACCATCGGAAGATCCAACTGCACCTAAAGTT 1202
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      CAATTCCCACCGTCTTATCTGTGTCCTACCTGTTGGTCACATAGTTCAACAGGTGAATTG 1262
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      GAATTAGGTAAAACTCCAGAGACCGAAGAATCATTATTTCAATTTCTTGTTGAACGATAT 1322
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      CGTGCATCATCTTGGAAGTATGTGGATTTACCTACAGTATTCATAACCAATGCTGTGGAA 1382
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TTGAAAACTGAACAACCAGTTCCTGATCTGTTAATAATATCCATTATTTCCGTTGTACTT 1442
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      ACAATATTAGCAGCTGTCATTNTACTTGCTGGCTTACATNTTCTGTGTCGTCGTAGATTG 1502
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TTCCGTCGAAGACGAGGACAGTATGCAGGTGGACAGTCAGTCTAAATATAATTTATTAAT 1562
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      ATTACGAAACAAAAAAATTAACAACGATAATTTTCGAAGATTTATTTTTTGTGAATAATT 1622
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      AATGAATAAAAACTTTGATCCTTCTGTTTTTCAAAGTAATTTTTGCGACTTTCCCTTTTT 1682
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TATGAACATTAAACTGACTTTGTTGAACTACTATTATTTTCCATTACTTATTAATCATTT 1742
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TTATTATTCTATTCTTATTTCTTACAGCTTTTTTGTCTATTTCGATTTACGCTTAAATAT 1802
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      CATGGCACTCTGTTTTGGTAGTTTGCTGTTCTCCCCCTCTTTTCCCCAATTCTTTGTTTC 1862
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TTTCTTCTATATATGGAATAGACTGCTTAGAATATATAAATAATTAAACATTAGGGATCA 1922
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      CTAATTTGTATCACTGCTATTATTTTTGTTTTCAATGATCGTATCCTCATAAATAACTTC 1982
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      AAAGGGTTGTATTTGAACATTGTTTTCTTTAGATATATACATGTATTCCTTTCTTTTGTT 2042
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TTTGAAAGTTTATCAACTTGTTGCATTTTGTTTTAATGTACTGTATTTTTCCACATGATA 2102
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      GTTTCCCTTTTTTTAAATATTACCTTAACGTCTTCCATAATTTATTTTGTTTGTGTGTAT 2162
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      GTAGTCGTGGTTTTTTCCAACAACTCCAATTGATCAATCATTTGTTCTATCTCAATACTT 2222
consensus_10452#1      ------------------------------------------------------------
                                                                                   

consensus_10452#0      TATCCAGTTTACTTTAATCAATAAAACAATGTT 2255
consensus_10452#1      ---------------------------------