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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10456#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1197 fasta sequence
[TTTGGGTTCTTTAAGAAGACGGGTTTTAACTCATATGGTTTAGGTATTCGTTTCTTTACGACCACTTCTGGATGCTTAGTGGAGGAGCCCATTGTTCTAAGCAAGTTGAAACGAGGAACTGGTGGGAGAGCTTCAT-TTAATGGCATAACCGTGACCGTGTTTGGTGGTACTGGATACTTAGGTCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAAAATAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTGTTTTTAGCCCGGACTTACATCTATGAAAAGGTTGCTCCCGTTCATTCCTACCTTACTTTTGAACGGTTAGAGAGGGAAAGTGCTACGGATATTTTATCTGGTTACCCACACTTGATGATCTTATGTCAGCTANGGAATNNGAGACACATNATCATATTGATTCTTATCGCGACAGTCTCTATGGATGCTCTTGTGAATTNCGAGCCGCTCCTCCCTATCAATTCANNATTCTGCTAATNGATTATACTAGATCTAGATGGAATGTGGGGGAAAGAAATT]
[+] EMBL AI067383 [TTTGGGTTCTTTAAGAAGACGGGTTTTAACTCATATGGTTTAGGTATTCGTTTCTTTACGACCACTTCTGGATGCTTAGTGGAGGAGCCCATTGTTCTAAGCAAGTTGAAACGAGGAACTGGTGGGAGAGCTTCAT TTAATGGCATAACCGTGACCGTGTTTGGTGGTACTGGATACTTAGGTCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACCTAACAGGCACAGAATCTGACACT ]
[+] EMBL AI068156 [TTTGGGTTCTTTAAGAAGACGGGTTTTAACTCATATGGTTTAGGTATTCGTTTCTTTACGACCACTTCTGGATGCTTAGTGGAGGAGCCCATTGTTCTAAGCAAGTTGAAACGAGGAACTGGTGGGAGAGCTTCAT TTAATGGCATAACCGTGACCGTGTTTGGTGGTACTGGATACTTAGGTCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACC ]
[-] EMBL CD061429 [ TTTAGGTATTCGTTTCTTTACGACCACTTCTGGATGCTTAGTGGAGGAGCCCATTGTTCTAAGCAAGTTGAAACGAGGAACTGGTGGGAGAGCTTCATCCTAATGGCATAACCGTGACCGTGTTTGGTGGTACT GATACTTAGGTCGGAATTTAA ]
[+] EMBL CD082215 [ cacgaagaCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTTCTCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAAAATAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTGTTTTTAGCCCGGACTTACATCTATGAAAAGGTTGCTCCCGTTCATTCCTACCTTACTTTTGAACGGTTAGAGAGGGAAAGTGCTACGGATATTTTATCTGGTTACCCACACTTGATGATCTTATGTCAGCTANGGAATNNGAGACACATNATCATATTGATTCTTATCGCGACAGTCTCTATGGATGCTCTTGTGAATTNCGAGCCGCTCCTCCCTATCAATTCANNATTCTGCTAATNGATTATACTAGATCTAGATGGAATGTGGGGGAAAGAAATT]
consensusID : consensus_10456#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 900 fasta sequence
[GGNAATTCGATTGAGTAAACTCCGTCCTGGAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCTTTTTAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTGTTTTTAGCCCGGACTTACATCTATGAAAAGGTTGCTCCCGTTCATTCCTACCTTACTTTTGAACGGTTAGAGAGGGAAAGTGCTACGGATATTTTATCTGGTTACCCAACACTTGATGATCTTAATGTCAAGCTAAGGAAATTGGAGGACCACATTAATCATATTGTATTTCTTCATCGCCGACAGCTCTTCTACTGGGATGCTCTTGGCTAATTTCCGGAGCCGCCTCCTCCCCCTATCCAATTTCAGTAATTTTCTGCTTAATTTGAATTTAATACTTAGAATTCATAGTATGGTATTGTTGTGTGAGAAGGTAAATTATATACTATAAA]
[+] EMBL CD133090 [GGNAATTCGATTGAGTAAACTCCGTCCTGGAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCTTTTTAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCT ]
[+] EMBL CD139149 [ AGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCA TATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTG TTTTAGCCCGGACTTACATCTATGAAAAGGTTGCTCCCGCTCAT ]
[+] EMBL CD131347 [ CGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTGTTTTTAGCCCGGACTTACATCTATGAAAAGGTTGCTCCCGTTCATTCCTACCTTACTTTTGAACGGTTAGAGAGGGAAAGTGCTACGGATATTTTATCTGGTTACCCAACACTTGATGATCTTAATGTCAAGCTAAGGAAATTGGAGGACCACATTAATCATATTGTATTTCTTCATCGCCGACAGCTCTTCTACTGGGATGCTCTTGGCTAATTTCCGGAGCCGCCTCCTCCCCCTATCCAATT ]
[-] EMBL CD075827 [ ATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTGTTTTTAGCCCGGACTTACATCTATGAAAAGGTTGCTCCCGTTCATTCCTACCTTACTTTTGAACGGTTAGAGAGGGAAAGTGCTACGGATATTTTATCTGGTTACCCAACACTTGATGATCTTAATGTCAAGCTAAGGAAATTGGAGGACCACATTAATCATATTGTATTTCTTCATCGCCGACAGCTCTTCTACTGGGATGCTCTTGGTGAATTTCCGGAGCCGCCTCCTCCCCCTATCCAATTTCAGTAATTTTCTGCTTAATTTGAATTTAATACTTAGAATTCATAGTATGGTATTGTTGTGTGAGAAGGTAAATTATATACTATAAA]
consensusID : consensus_10456#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 721 fasta sequence
[AGGCCATTAATTCGGCACGAGGAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAAAATAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTGTTTTTGTAAGTACCTTATATAAATATATCTATCAAAATA]
[+] EMBL CD081736 [AGGCCATTAATTCGGCACGAGGAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAAAATAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGGTATACATAACTCCAATGTCCCCCTTGTTTTTGTAAGTACCTTATATAAATATATCTATCAAAATA]
[-] EMBL CD075469 [ GAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAAAATAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTTATCGATTAGATGACATGGTAAAATGGATTTACTGGCTTTGTCGATACTTACCTAGTAAAGTATACATAACTCCAATGTCCCCCTTGTTTTTGTAAGTACCTTATATAAAGATt ]
[-] EMBL CD188477 [ GAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGACGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTAGTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCAATTCATTGCATAAT ]
consensusID : consensus_10456#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 567 fasta sequence
[CGTGTTTGGTGGTACTGGATACTTAGGTCGGATTTAAATGGCACAACTAGCCAAAACTGGACNACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGGTACGTAATTCTTAGGGCTACTTTTTTATATATACAAACGTGAATGTAGAGTTCATGTGTATTCAGAAACATTCAATATTTATCTCGAGATTGATTGGATTCTTCTGTCTACTTATTTTTTATCTTTCTCGTTTTTTTTGGGGGGGGGGAAGGGTAGCGCTTCAACCGCTCTTCCCAATGTTGTTATATAGAGCTGTTCGCCATCACACATTTTTCGCAATAAATATGTGAATTAAAGGCCTTTCACCTGAATTTAATATTCCTTTTAGCGAACTTAATGAATAGATCATCAAACTGTTATCATTAGGTTATATGATCTAATTGATTTGAAACCTAAACAATCCTGTGACGCTGAAAATTTTAAAAGTCAACTTTACTGTGAAGAAATAGATTTTCGGTAAAGTTATCCTTCAAATGCA]
[-] EMBL CD201077 [CGTGTTTGGTGGTACTGGATACTTAGGTCGGATTTAAATGGCACAACTAGCCAAAACTGGACNACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGGTACGTAATTCTTAGGGCTACTTTTTTATATATACAAACGTGAATGTAGAGTTCATGTGTATTCAGAAACATTCAATATTTATCTCGAGATTGATTGGATTCTTCTGTCTACTTATTTTTTATCTTTCTCGTTTTTTTTGGGGGGGGGGAAGGGTAGCGCTTCAACCGCTCTTCCCAATGTTGTTATATAGAGCTGTTCGCCATCACACATTTTTCGCAATAAATATGTGAATTAAAGGCCTTTCACCTGAATTTAATATTCCTTTTAGCGAACTTAATGAATAGATCATCAAACTGTTATCATTAGGTTATATGATCTAATTGATTTGAAACCTAAACAATCCTGTGACGCTGAAAATTTTAAAAGTCAACTTTACTGTGAAGAAATAGATTTTCGGTAAAGTTATCCTTCAAATGCA]
consensusID : consensus_10456#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 413 fasta sequence
[CATACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGGCTTTGCAAACTTATTTTATTTGAATACATAAATGTTGCTACAAACAGGGACTAAAACAAATATGCCCCGCACATATAAGTGAGTGAAATCGTGAAAGATGAGGGAGAGTAAATTTAATAAAAAATTAATTGTTAAATAGGTAAAAAATGAGTGGGCAAGAGCAGCAAATAATGCAAGAAACAATTATGATACTTAAATAATTTCATCTCACCCGGTACATTATAAACTAACCATTTTACCGTTACGTTATAAAATCGACGAGGAACTGTGAGCATGCATATCCAGGCAAAAATAAAACTTGCCCCAAATCTCCAATAACTTTTACATTTCT]
[+] EMBL AI977610 [CATACGGTAATGCAGCTGCATGGCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGGCTTTGCAAACTTATTTTATTTGAATACATAAATGTTGCTACAAACAGGGACTAAAACAAATATGCCCCGCACATATAAGTGAGTGAAATCGTGAAAGATGAGGGAGAGTAAATTTAATAAAAAATTAATTGTTAAATAGGTAAAAAATGAGTGGGCAAGAGCAGCAAATAATGCAAGAAACAATTATGATACTTAAATAATTTCATCTCACCCGGTACATTATAAACTAACCATTTTACCGTTACGTTATAAAATCGACGAGGAACTGTGAGCATGCATATCCAGGCAAAAATAAAACTTGCCCCAAATCTCCAATAACTTTTACATTTCT]
consensusID : consensus_10456#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 337 fasta sequence
[GGAACTGGTGGGAGAGCTTCATTTAATGGCATAACCGTGACCGTGTTTGCTGGTACTGGATACTTAGGTCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATGATGCGGCCTCTCGAGTTCACTCCACGCC]
[-] EMBL CD126608 [GGAACTGGTGGGAGAGCTTCATTTAATGGCATAACCGTGACCGTGTTTGCTGGTACTGGATACTTAGGTCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTGGTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACACATGATGCGGCCTCTCGAGTTCACTCCACGCC]
consensusID : consensus_10456#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 331 fasta sequence
[AGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAAAATAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTCCTGCGTGAACGTCCAGACGCTACAATTTTCAGGCCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAA]
[+] EMBL CD144596 [AGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAAAATAAGAATCCTCCGAAATATGTTCGAAAGCATTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTCCTGCGTGAACGTCCAGACGCTACAATTTTCAGGCCAGCTGAAATATGGGGACCACATGATCGTTTTTTGTGTTATTTTGCTTCAAGACCTCGGCGATTCACTAGAAACTTTACTATCGAACATGTACACATTGATGCGGCCTCTCGAATTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGGTCCATGTATCTGCACTGTGTCAA]
consensusID : consensus_10456#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 168 fasta sequence
[TCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGACCCCCCATCAATCACAATACCATA]
[-] EMBL BG930159 [TCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTTTTGCCTTTTGATTTGAAAGATGATGACCCCCCATCAATCACAATACCATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 ------------------------------------------------------------
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 ------------------------------------------------------------
consensus_10456#0 TTTGGGTTCTTTAAGAAGACGGGTTTTAACTCATATGGTTTAGGTATTCGTTTCTTTACG 60
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 ------------------------------------------------------------
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 ------------------------------------------------------------
consensus_10456#0 ACCACTTCTGGATGCTTAGTGGAGGAGCCCATTGTTCTAAGCAAGTTGAAACGAGGAACT 120
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 ------------------------------------------------------------
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 ------------------------------------------------------------
consensus_10456#0 GGTGGGAGAGCTTCATTTAATGGCATAACCGTGACCGTGTTTGGTGGTACTGGATACTTA 180
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 ------------------------------------------------------------
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 --------------------------------------------------------AGGC 4
consensus_10456#0 GGTCGGAATTTAATGGCACAACTAGCCAAAACTGGAACACAGATTATTCTTCCATACAGA 240
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 ------------------------------------------------------------
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 CATTAATTCGGCACGAGGAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTT 64
consensus_10456#0 TGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCAAGTTTTATTT 300
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ---------------------------------------------------------GGA 3
consensus_10456#1 --------------------------------------------------GGNAATTCGA 10
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 TTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTG 124
consensus_10456#0 TTGCCTTTTGATTTGAAAGATGATGAGTCCTTAAGAAAGGCTATGAAGTATAGTGATGTG 360
consensus_10456#4 ----------------------------------------------CATACGGTAATGCA 14
consensus_10456#3 --------------------------------------CGTGTTTGGTGGTACTGGATAC 22
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ACTGGTGGGAGAGCTTCATTTAATGGCATAACCGTGACCGTGTTTGCTGGTACTGGATAC 63
consensus_10456#1 TTGAGTAAACTCCGTCCTGGAGAATCTGACACTAGAAACTTTACTATCGAACATGTACAC 70
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 GTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACAC 184
consensus_10456#0 GTCATCAACCTAACAGGCACAGAATCTGACACTAGAAACTTTACTATCGAACATGTACAC 420
consensus_10456#4 GCTGCATGGCATGTTTTTTTT--TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 72
consensus_10456#3 TTAGGTCGGATTT---AAA--TGGCACAACTAGCC--AAAACTGGACNACAGATTATTCT 75
consensus_10456#7 -----TCGGAATT---TAA--TGGCACAACTAGCC--AAAACTGGAACACAGATTATTCT 48
consensus_10456#5 TTAGGTCGGAATT---TAA--TGGCACAACTAGCC--AAAACTGGAACACAGATTATTCT 116
consensus_10456#1 ATTGATGCGGCCTCTCGAA--TTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGG 128
consensus_10456#6 -------------------------------------AGAGTTAGGAGTTCAGCAACTGG 23
consensus_10456#2 ATTGATGCGGCCTCTCGAA--TTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGG 242
consensus_10456#0 ATTGATGCGGCCTCTCGAA--TTGCAAGGATATCTAAAGAGTTAGGAGTTCAGCAACTGG 478
consensus_10456#4 TTTTTTAAGGCTTTGCAAACTTATTTTATTTGAATACATAAATGTTGCTACAAACAGGGA 132
* * * *
consensus_10456#3 TCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCA 135
consensus_10456#7 TCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCA 108
consensus_10456#5 TCCATACAGATGTGACCCTCATATGATCAGAGATGTAAAAGTTATTGGAGATCTGGGGCA 176
consensus_10456#1 TCCATGTATCTGC-ACTGTGTCTTTTTAAGAATCCTCCGAAATAT----GTTCGAAAGCA 183
consensus_10456#6 TCCATGTATCTGC-ACTGTGTCAAAATAAGAATCCTCCGAAATAT----GTTCGAAAGCA 78
consensus_10456#2 TCCATGTATCTGC-ACTGTGTCAAAATAAGAATCCTCCGAAATAT----GTTCGAAAGCA 297
consensus_10456#0 TCCATGTATCTGC-ACTGTGTCAAAATAAGAATCCTCCGAAATAT----GTTCGAAAGCA 533
consensus_10456#4 CTAAAACAAATATGCCCCGCACATATAAGTGAGTGAAATCGTGAAAGATGAGGGAGAGTA 192
* * * * * * * *
consensus_10456#3 AGTTTTATTTTTGGTACGTAA-----TTCTTAGGGCTACTTTTTTATATATACAAACGTG 190
consensus_10456#7 AGTTTTATTTTTGCCTTTTGA-----TTTGAAAGATGATGACCCCCCAT---CAATCACA 160
consensus_10456#5 AGTTTTATTTTTGCCTTTTGA-----TTTGAAAGATGATGAGTCCTTAAGAAAGGCTATG 231
consensus_10456#1 TTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGA 243
consensus_10456#6 TTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTCCTGCGTGAACGTCCAGA 138
consensus_10456#2 TTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGA 357
consensus_10456#0 TTCTCGATTTATGGTATCTAAAGCAATTGGTGAAGAAGAGGTTCTGCGTGAACGTCCAGA 593
consensus_10456#4 AATTTAATAAAAAATTAATTGTTAAATAGGTAAAA-AATGAGTGGGCAAGAGCAGCAAAT 251
* ** * *
consensus_10456#3 AA-TGTAGAGTTCATGTG--T---ATTCAGAAACATTCAATATTTA-TCTCGAGATTGAT 243
consensus_10456#7 AT-ACCATA--------------------------------------------------- 168
consensus_10456#5 AAGTATAGTGATGTGGTCATC---AACCTAACAGGCACAGAATCTG-ACACTAGAAACTT 287
consensus_10456#1 CGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGT-TTTTTGTGTTATT 302
consensus_10456#6 CGCTACAATTTTCAGGCCAGCTGAAATATGGGGACCACATGATCGT-TTTTTGTGTTATT 197
consensus_10456#2 CGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGT-TTTTTGTGTTATT 416
consensus_10456#0 CGCTACAATTTTCAGACCAGCTGAAATATGGGGACCACATGATCGT-TTTTTGTGTTATT 652
consensus_10456#4 AATGCAAGAAACAATTATGATACTTAAATAATTTCATCTCACCCGGTACATTATAAACTA 311
*
consensus_10456#3 TGGATTCTTCTGTCTACTTATTTTTTATCTTTC----TCGTTTTTTTTGGGGGGGGGGAA 299
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 TACTATCGAACATGTACACATGATGCGGCCTCT----CGAGTTCACTCCACGCC------ 337
consensus_10456#1 TTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTA 362
consensus_10456#6 TTGCTTCAAGACCTCGGCGATTCACTAGAA--------------ACTTTACTATCGAACA 243
consensus_10456#2 TTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTA 476
consensus_10456#0 TTGCTTCAAGACCTCGGCGATTCACTAGACTGCAAAGTGTTCATATTCCATTATGGGCTA 712
consensus_10456#4 ACCATTTTACCGTTACGTTATAAAATCGACGAGGAACTGTGAGCATGCATATCCAGGCAA 371
consensus_10456#3 GGGTAGCGCTTCAACCGCTCTTCCCAATGTTGTTATATAGAGCTGTTCGCCATCACACAT 359
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 GTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCA 422
consensus_10456#6 T------GTACACATTGATGCGGCCTCTCGAATTGCAAGGA--TATCTAAAGAGTTAGGA 295
consensus_10456#2 GTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCA 536
consensus_10456#0 GTGGAAAAAATACCGTAAAGCAACCTGTTTGTGTACATGATCTTGCTTGTGGAATTGTCA 772
consensus_10456#4 AAATAAAACTTGCCCCAAATCTCCAATAACTTTTACATTTCT------------------ 413
consensus_10456#3 TTTTCGCAATAAATATGTGAATTAAAGGCCTTTCACCTGAATTTAATATTCCTTTTAGCG 419
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 ATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTT 482
consensus_10456#6 GTTCAGCAACTGGTCCAT-GTATCTGCACTGTGTCAA----------------------- 331
consensus_10456#2 ATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTT 596
consensus_10456#0 ATTCATTGCATAATCCAGAGTCACTAGGACAAATTTATGAAGCCGTTGGTCCTCATCGTT 832
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 AACTTAATGAATAGATCATCAAACTGTTATCATTAGGTTATATGATCTAATTGATTTGAA 479
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 ATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGG 542
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 ATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGG 656
consensus_10456#0 ATCGATTAGATGACATGGTAAAATGGATTTACTTCCTTTGTCGATACTTACCTAGTGAGG 892
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ACCTAAACAATCCTGTGACGCTGAAAATTTTAAAAGTCAACTTTACTGTGAAGAAATAGA 539
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 TATACATAACTCCAATGTCCCCCTTGTTTTTAGCCCGGACTTACATCTATGAAAAGGTTG 602
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 TATACATAACTCCAATGTCCCCCTTGTTTTTGTAAGTACCTTATATAAATATATCTATCA 716
consensus_10456#0 TATACATAACTCCAATGTCCCCCTTGTTTTTAGCCCGGACTTACATCTATGAAAAGGTTG 952
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 TTTTCGGTAAAGTTATCCTTCAAATGCA-------------------------------- 567
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 CTCCCGTTCATTCCTACCTTACTTTTGAACGGTTAGAGAGGGAAAGTGCTACGGATATTT 662
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 AAATA------------------------------------------------------- 721
consensus_10456#0 CTCCCGTTCATTCCTACCTTACTTTTGAACGGTTAGAGAGGGAAAGTGCTACGGATATTT 1012
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 TATCTGGTTACCCAACACTTGATGATCTTAATGTCAAGCTAAGGAAATTGGAGGACCACA 722
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 ------------------------------------------------------------
consensus_10456#0 TATCTGGTTACCCA-CACTTGATGATCTTA-TGTCAGCTANGGAATNNGAGACACATNAT 1070
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 TTAATCATATTGTATTTCTTCATCGCCGACAGCTCTTCTACTGGGATGCTCTTGGCTAAT 782
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 ------------------------------------------------------------
consensus_10456#0 CATATTGATTCTTATCGCGACAGTCTCTATGGATGCTCTTGTGAATTNCGAGCCGCTCCT 1130
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ------------------------------------------------------------
consensus_10456#7 ------------------------------------------------------------
consensus_10456#5 ------------------------------------------------------------
consensus_10456#1 TTCCGGAGCCGCCTCCTCCCCCTATCCAATTTCAGTAATTTTCTGCTTAATTTGAATTTA 842
consensus_10456#6 ------------------------------------------------------------
consensus_10456#2 ------------------------------------------------------------
consensus_10456#0 CCCTATCAATTCANNATTCTGCTAATNGATTATACTAGATCTAGATGGAATGTGGGGGAA 1190
consensus_10456#4 ------------------------------------------------------------
consensus_10456#3 ----------------------------------------------------------
consensus_10456#7 ----------------------------------------------------------
consensus_10456#5 ----------------------------------------------------------
consensus_10456#1 ATACTTAGAATTCATAGTATGGTATTGTTGTGTGAGAAGGTAAATTATATACTATAAA 900
consensus_10456#6 ----------------------------------------------------------
consensus_10456#2 ----------------------------------------------------------
consensus_10456#0 AGAAATT--------------------------------------------------- 1197
consensus_10456#4 ----------------------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||