These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10458#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1127 fasta sequence [GGGCCATATTCGGCCGCAGCACAGTTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTGATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA-CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA-ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT-GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC-ATCGGCTGTTGTGTTGTG-TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC] [+] EMBL CD081515 [GGGCCATATTCGGCCGCAGCACAGTTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTGATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGGTAAGAAACTGATCAAT ANATTGACTGGGAGACAC AAC AGACTCANTTGTTTTGGGGCTAGTC ATCGGCTGTTGNGTTGNN GTTCTGCTAA TTACCGC TC TTTGAG TATATACATATATATTAC TA TTTTTTAGGAGGTAG ACTGTGATG TTTGACT ATATC TGT ATTTC AATACG ATGA GTGCGTG GAG ATG ACATG A TTCTGCTA TGTATATATa ] [+] EMBL CD081636 [gaGCCATATTCGGCCGAGGCACAGTTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTGATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTC ACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCAC GGTAAAAGAACTGATCAAT ANATNGACT GGAGACAC AAC AGACTCANTTGTTTT GGGCTAG C ATCCGCTG GTGNNGTGNGTTCTGCTAA TTACCGC TCTTTTGAG TAT TACA ATATATTAC TA TTTTTTAGGAGG AG ACTG GATG TTTGACT ATATCTGG ATTTC AATACG ATGA GTGC CGGGAG ATG ACAAG A TTCTGAT TTGAAAATAT ] [+] EMBL CD094449 [ TTGCGTTTGGTCGCCAGCGCAAATGTTTTGTGCCGGTATTCCGTGTTTTAATATCCGTACATTTGAATATCAACGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAGCTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACT ] [+] EMBL CD079277 [ CGATTATAGTATGATCCCTTCGACCTGGGATGAGCTTAGAATACAAGCTCGAATACTGGAGAGCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCTAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTNTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGT ] [+] EMBL CD078668 [ GCGAGATTGA CTCAAAGTTAGCTGCTTTTGGTAAAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGC ] [+] EMBL CD065232 [ TGACCTCAACG TAGCTGCTTTTGG NNAATTGGGACTCGACCAGTAGAACACAAACACATCCCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGACACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATgggt ] [-] EMBL CD061386 [ CCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCA ] [-] EMBL CD061335 [ CCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGATACGGATGGCAACTTTTGTGCCTGAAACAGAAGCTACACCTACCTCTTTT ] [-] EMBL CD061392 [ CCTCGTTTTACTAATTCTGGAATAATCAGTAAAAGCAGTGCTATCCCAGAAGTACCATCAAATGTAGATTTCGACACGAACTTCAGCGTAATGTGTAACGAAATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTT ] [+] EMBL CD194534 [ ATAGAAGAGCAACTGCAGAGACTTACTCAAATCAATGA ACGGATGGCAACTTTTGTCCCTGAAACAGAAGCTACACCTACCTCTTTTGACAGTGCTGCACGAAACCCACTTAATCCTACTAATATGGCAGCTGGCAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAG ] [+] EMBL AI977434 [ CACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAG ] [+] EMBL AI977268 [ CACTTAATCCTACTAATATGGCAGCTGGTAGACTTAGCCAACTGCATACAGCTAAACGACATCGTGAAATTCTTCGTGATTATGCTCAAGAGTTTCGTCAAACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTCAATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATAT ] [-] EMBL CD075338 [ AACTAAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC] [-] EMBL CD073132 [ AAGGCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC] [-] EMBL CD075458 [ GCCAAACTCATTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAATGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC] [-] EMBL CD077302 [ TTGCTGCACGTGAACGTGAAAACCTTTTAGGATCTGTTTATCGAGATACAAACTCCACAACTGTAAATCTAAGCGGTGATTTTACTTCAAAACCTCAATCTGATGTAGATTCTTCCGGTGGTAATCAACGTTCCGGTTTACAGTCAAATATATCTAGTTCAACTCGTTTACTTCTGGATGAACAAGAAAAATACCATCGCTCTAATCGTCTGTTGGATGAACATTTAGCTGCAGCATCAACAATACGAGCAGCATTACGTGCCCAACGCTTCGCACTACGTACTGCCTCAACAGGCCTATCGAGTTTAAGCTCCCGTTTTCCACAGGTAAAGAAACTGATCAATAAAATTGACT GGAGACACAAACAAGACTCAATTGTTTTGGGGCTAGTC ATCGGCTGTTGTGTTGTG TTTCTGCTAATTTACCGCTTCTTTTGAGTTATATACATATATATTACTTATTTTTTTAGGAGGTAGTACTGTGATGTTTTGACTAATATCTTGTAATTTCAAAATACGAATGAGGTGCGTGTGAGTATGTACATGTATTTCTGCTATTGTTAATATTATTATTTC] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||