cluster # 10500

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Schistosoma mansoni
cluster # 10500 cluster # 10500 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10500#0 length = 1690 sequences # 15

consensus_10500#1 length = 698 sequences # 1
consensus_10500#2 length = 268 sequences # 1

consensusID : consensus_10500#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1690
fasta sequence

                              [TGAAGTTAACACTTTTGGATTATGCTGAGTACANACTAACAGGTAAAGTTGGCCAACATGATTTTGACTTATCCGTAAGAACGTTTTTAACTTGTGCAGAATCGGTTGGTGGTACAACATATTTAGTGACAGCGGGAGCAGTAACATCGATTGGTATAGTTGATGGAAATATTGGAATAGTATGTCGTATTCGGTTGACAAGATGCTATCGGGACCTCATTTGAGTATGAGTACGATAATGATAGAGGTAAACGCCCAAAAGATGAACAACTTGTTTTAGTAGTCGTATAATGAAGAATTATTTGTTTCCAAAAATCTACCAGTTTGTTCTACTTCAGAATTCAAAAATAGCAGCGATGAATGATTAGGGTGTTTCTGGACTAATTTATTGCCTATATTCATCACATTGGATAATTTATATTCTCTATCTGCAGATAATATTGTAGCAGGTTTTGTAACAACGTCAGTGGGAAACAGACAATCTTGAGAGTAGCTATTACAACTCTCAGATTCTGACAACATGTTTCTAGATTCCCCTAAACCAGATGTTAATGTTGATATATTATCTCGTGGGTGAACAATAGCATTAAATCGATCCAATGAATTGCTGATTAAATGAAGTAGATCTGTACCCTCCATATCATCTTCATCGATAAGATCATTTGTATCTTTTGAAGATAGATATATGTCAGTAAGATTAGATGGACTCATACTTCGAGCATGTTGTTCTGTATTAGTTAGTCGCACATTTCTTAGTGTCTTTTCTTTGACAGGGCATTTAATAGGATTTGTATGAAACTTTAAAGCATTGGACACAGAGTGGTTCAACCCTAATGCGACCATTTGATCTTTTGTGGAGTTTAGTGAACATGTGGGACTAATTATTCGTGATTCGTAAATAGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTTTGATGTATTCGTGGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACCTTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTAAATGACTATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACAGAGGTCGTAACACTTGGCAGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG-TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATTCTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTATAACCTAGGACCATGTTTTGTTAACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGCCCTCCAGGTAGTGAATATTAACTTCTCACCAATCAGAATTAAATTCTTGATTGGGTGAACAATGAACTAAGAGATAGTTTTACTGAACTTTAGTCACTGCGGCGAGTATGACTGTCAGTCGCCAGAAAATCTGAACAGATTCACAAAC]

[-] EMBL CD179667             [TGAAGTTAACACTTTTGGATTATGCTGAGTACANACTAACAGGTAAAGTTGGCCAACATGATTTTGACTTATCCGTAAGAACGTTTTTAACTTGTGCAGAATCGGTTGGTGGTACAACATATTTAGTGACAGCGGGAGCAGTAACATCGATTGGTATAGTTGATGGAAATATTGGAATAGTATGTCGTATTCGGTTGACAAGATGCTATCGGGACCTCATTTGAGTATGAGTACGATAATGATAGAGGTAAACGCCCAAAAGATGAACAACTTGTTTTAGTAGTCGTATAATGAAGAATTATTTGTTTCCAAAAATCTACCAGTTTGTTCTACTTCAGAATTCAAAAATAGCAGCGATGAATGATTAGGGTGTTTCTGGACTAATTTATTGCCTATATTCATCACATTGGATAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD149326             [                                                                                                                                                                                    TATGTCGTATTCGGTTGACAAGATGCTATCGGGACCTCATTTGAGTATGAGTACGATAATGATAGAGGTAAACGCCCAAAAGATGAACAACTTGTTTTAGTAGTCGTAT ATGAAGAATTATTTGTTTCCAAAAATCTACCAGTTTGTTCTACTTCAGAATTCAAAAATAGCAACGATGAATGATTAGGGTGTTTCTGGACTAATTTATTGCCTATATTCATCACATTGGATAATTTATATTCTCTATCTGCAGATAATATTGTAGCAGGTTTTGTAACAACGTCAGTGGGAAACAGACAATCTTGAGAGTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL AW017347             [                                                                                                                                                                                                                                                                                                                                                                      GAATGATTAGGGTGTTTCTGGACTAATTTATTGCCTATATTCATCACATTGGATAATTTATATTCTCTATCTGCAGATAATATTGTAGCAGGTTTTGTAACAACGTCAGTGGGAAACAGACAATCTTGAGAGTAGCTATTACAACTCTCAGATTCTGACAACATGTTTCTAGATTCCCCTAAACCAGATGTTAATGTTGATATATTATCTCGTGGGTGAACAATAGCATTAAATCGATCCAATGAATTGCTGATTAAATGAAGTAGATCTGTACCCTCCATATCATCTTCATCGATAAGATCATTTGTATCTTTTGAAGATAGATATATGTCAGTAAGATTAGATGGACTCATACTTCGAGCATGTTGTTCTGTATTAGTTAGTCGCACATTTCTTAGTGTCTTTTCTTTGACAGGGCATTTAATAGGATTTGTATGAAACTTTAAAGCATTGGACACAGAGTGGTTCAACCCTAATGCGACCATTTGATCTTTTGTGGAGTTTAGTGAACATGTGGGACTAATTATTCGTGATTCGTAAATAGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD165227             [                                                                                                                                                                                                                                                                                                                                                                                                         TATATTCATCACATTGGATAATTTATATTCTCTATCTGCAGATAATATTGTAGCAGGTTTTGTAACAACGTCAGTGGGAAACAGACAATCTTGAGAGTAGCTATTACAACTCTCAGATTCTGACAACATGTTTCTAGATTCCCCTAAACCAGATGTTAATGTTGATATATTATCTCGTGGGTGAACAATAGCATTANATCGATCCAATGAATTGCTGATTAAATGAAGTAGATCTGTACCCTCCATATCATCTTCATCGANTAGATCATTTGTATCTTTTGAAGATAGATATATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD113318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACCCTAATGCGACCATTTGATCTTTTGTGGAGTTTAGTGAACATGTGGGACTAATTATTCGTGATTCGTAAATAGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTTTGATGTATTCGTGGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACCTTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTAAATGACTATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACAGAGGTCGTAACACTTGGCAGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGGTTTTTGA TTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGn                                                                                                                                                                                                                                                              ]
[+] EMBL CD121097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTATTCGTGATTCGTAAATAGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTTTGATGTATTCGTGGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACCTTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTAAATGACTATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACAGAGGTCGTAACACTTGGCGGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTCTCTTTAGAGAGACGTTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACANAGTTATTCTTTCCAGACTCTGGATCACAGTCTANAGAATAACTA                                                                                                                                                                                                                     ]
[-] EMBL CD120878             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATTCGTGATTCGTAAATAGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTNTGATGTATTCGTGGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACCTTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTAAATGACCATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACGGAGGTCGTAACACTTGGCAGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATTCTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTAT                                                                                                                                                                                                                    ]
[+] EMBL CD130303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTCGTAAATAGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTTTGATGTATTCGTGGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACCTTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTACATGACTATTTCCATTGGAAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGATACGACGGTTGATTTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD165064             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATTCGTAAATAGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTTTGATGTATTCGTGGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACCTTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTAAATGACTATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD113461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTGTTAAATGACTATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACAGAAGTCGTAACACTTGGCAGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATTCTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTATAACCTAGGACCATGTTTTGTTAACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGCCCTCCAGGTAGTGAATATTAACTTCTCACCAATCAGAATTAAATTCTTGATTGGGTGAACAATGAACTAAGAGATAGTTTTACTGAACTTTAGTCACTGCGGCGAGTATGACTGTCAGTCGCCAGAAAATCTGA              ]
[-] EMBL CD113421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGTTTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACAGAGGTCGTAACACTTGGCAGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTTTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATTCTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTATAACCTAGGACCATGTTTTGTTAACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGCCCTCCAGGTAACGAATATTAACTTCTCACCAATCAGAATTAAATTCTTGATTGGGTGAACAATGAACTAAGAGATAGTTTTACTGAACTTTAGTCACTGCGGCGAGTATGACTGTCAGTCGCCAGAAAATCTGAACAGATTCACAAAC]
[+] EMBL CD148869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           cagtggGCTCACTAAAAAACAGAAGTCGTAACACTTGGCAGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATTCTTTCCAGACTCTGGATCACAGTCTAA                                                                                                                                                                                                                               ]
[+] EMBL CD148835             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGAAGTCGTAACACTTGGCAGGAGAGCTATCATCAGTGCTTTCCTCACTGCAAACAACCTGTTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATTCTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTATAACCTAGGACCATGTTTTGTTAACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGCCCTCCAGGTAGTGAATATTAACTTCTCACCAATCAAAATTAAATTCTTGATTGGGTGAACAATGAACTAAGAGATAGTTTTACTGAACTTTAATCACTGCGGCGAGTATGACTG                                  ]
[+] EMBL CD179303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGG TTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATTCTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTATAACCTAGGACCATGTTTTGTTAACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGCCCTCCAGGTAATGAATATTAACTTCTCACCAATCAGAATTAAATTCTTGATTGGGTGAACAGTGAACTAAGA                                                                            ]
[-] EMBL CD113310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTAAAGAATAACTATAACCTAGGACCATGTTTTGTTAACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGCCCTCCAGGTAGTGAATATTAACTTCTCACCAATCAGAATTAAATTCTTGATTGGGTGAACAATGAACTAAGAGATAGTTTTACTGAACTTTAGTCACTGCGGCGAGTATGACTGTCAGTCGCCAGAAAGTCTGA              ]




>consensus_10500#0
TGAAGTTAACACTTTTGGATTATGCTGAGTACANACTAACAGGTAAAGTTGGCCAACATG
ATTTTGACTTATCCGTAAGAACGTTTTTAACTTGTGCAGAATCGGTTGGTGGTACAACAT
ATTTAGTGACAGCGGGAGCAGTAACATCGATTGGTATAGTTGATGGAAATATTGGAATAG
TATGTCGTATTCGGTTGACAAGATGCTATCGGGACCTCATTTGAGTATGAGTACGATAAT
GATAGAGGTAAACGCCCAAAAGATGAACAACTTGTTTTAGTAGTCGTATAATGAAGAATT
ATTTGTTTCCAAAAATCTACCAGTTTGTTCTACTTCAGAATTCAAAAATAGCAGCGATGA
ATGATTAGGGTGTTTCTGGACTAATTTATTGCCTATATTCATCACATTGGATAATTTATA
TTCTCTATCTGCAGATAATATTGTAGCAGGTTTTGTAACAACGTCAGTGGGAAACAGACA
ATCTTGAGAGTAGCTATTACAACTCTCAGATTCTGACAACATGTTTCTAGATTCCCCTAA
ACCAGATGTTAATGTTGATATATTATCTCGTGGGTGAACAATAGCATTAAATCGATCCAA
TGAATTGCTGATTAAATGAAGTAGATCTGTACCCTCCATATCATCTTCATCGATAAGATC
ATTTGTATCTTTTGAAGATAGATATATGTCAGTAAGATTAGATGGACTCATACTTCGAGC
ATGTTGTTCTGTATTAGTTAGTCGCACATTTCTTAGTGTCTTTTCTTTGACAGGGCATTT
AATAGGATTTGTATGAAACTTTAAAGCATTGGACACAGAGTGGTTCAACCCTAATGCGAC
CATTTGATCTTTTGTGGAGTTTAGTGAACATGTGGGACTAATTATTCGTGATTCGTAAAT
AGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTTTGATGTATTCGT
GGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACC
TTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTAAATGACT
ATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGT
TTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACA
GAGGTCGTAACACTTGGCAGGAGAGCTGTCATCAGTGCTTTCCTCACTGCAAACAACCTG
TTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGC
CTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCT
GAAACTGATGGGTTTTGATTTTGTTAGGGCAGGAAATTCCTCCAAATCAACAAAGTTATT
CTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTATAACCTAGGACCATGTTTTGTTA
ACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGCCCTCCAGGTAGTGAATAT
TAACTTCTCACCAATCAGAATTAAATTCTTGATTGGGTGAACAATGAACTAAGAGATAGT
TTTACTGAACTTTAGTCACTGCGGCGAGTATGACTGTCAGTCGCCAGAAAATCTGAACAG
ATTCACAAAC

consensusID : consensus_10500#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 698
fasta sequence

                              [TTTGAGGTGATTGAGATGGATGTCTTAATAGTTGTGTCTCATGCATTAACGACATATTGGATTGAAATGATTTACTATGATTCCATAGATTTTCATCTTGACTAACAAATAAACCCATTGAGTTACATTTGTTATTATTAACACTACCATGATGAAGAGAAGGTGAATCAACTGAAGTTGTATGAACAGCAGTTGTATTAGTGGTATTAGTAGTTGAGACATTACATAAAAGATTTTTTAAATCCAAATTTAAATAATTTAACATCTCTATATCATTATCAGTTAACATATTTCGGTTATTGTTAATTAATTCAACAAGTAAATTGTTTGATTCTATGGATGAAGTTAACACTTTTGGATTATGCTGAGTTACACTAACAGGTAAAGTTGGCCAACATGATTTTGACTTATCCGTAAGAACGTTTTTAACTTGTGCAGAATCGGTTGGTGGTACAACATATTTAGTGACAGCGGGAGCAGTAACATCGATTGGTATAGTTGATGGAATATTGGAATAGTATGTCGTATTCGGTTGACAAGATGCTATCGGGACCTCATTTGAGTTTGAGTACGATAATGATAGAGGTAAACGCCCCAAAGATGAACAACTTAAGACAAGAATACAAAAAAAGACACCCTCCATTAAATAATTTTANACACACATCTATACACATAANAATCTATTTATTATGTTTAGC]

[+] EMBL CD114161             [TTTGAGGTGATTGAGATGGATGTCTTAATAGTTGTGTCTCATGCATTAACGACATATTGGATTGAAATGATTTACTATGATTCCATAGATTTTCATCTTGACTAACAAATAAACCCATTGAGTTACATTTGTTATTATTAACACTACCATGATGAAGAGAAGGTGAATCAACTGAAGTTGTATGAACAGCAGTTGTATTAGTGGTATTAGTAGTTGAGACATTACATAAAAGATTTTTTAAATCCAAATTTAAATAATTTAACATCTCTATATCATTATCAGTTAACATATTTCGGTTATTGTTAATTAATTCAACAAGTAAATTGTTTGATTCTATGGATGAAGTTAACACTTTTGGATTATGCTGAGTTACACTAACAGGTAAAGTTGGCCAACATGATTTTGACTTATCCGTAAGAACGTTTTTAACTTGTGCAGAATCGGTTGGTGGTACAACATATTTAGTGACAGCGGGAGCAGTAACATCGATTGGTATAGTTGATGGAATATTGGAATAGTATGTCGTATTCGGTTGACAAGATGCTATCGGGACCTCATTTGAGTTTGAGTACGATAATGATAGAGGTAAACGCCCCAAAGATGAACAACTTAAGACAAGAATACAAAAAAAGACACCCTCCATTAAATAATTTTANACACACATCTATACACATAANAATCTATTTATTATGTTTAGC]




>consensus_10500#1
TTTGAGGTGATTGAGATGGATGTCTTAATAGTTGTGTCTCATGCATTAACGACATATTGG
ATTGAAATGATTTACTATGATTCCATAGATTTTCATCTTGACTAACAAATAAACCCATTG
AGTTACATTTGTTATTATTAACACTACCATGATGAAGAGAAGGTGAATCAACTGAAGTTG
TATGAACAGCAGTTGTATTAGTGGTATTAGTAGTTGAGACATTACATAAAAGATTTTTTA
AATCCAAATTTAAATAATTTAACATCTCTATATCATTATCAGTTAACATATTTCGGTTAT
TGTTAATTAATTCAACAAGTAAATTGTTTGATTCTATGGATGAAGTTAACACTTTTGGAT
TATGCTGAGTTACACTAACAGGTAAAGTTGGCCAACATGATTTTGACTTATCCGTAAGAA
CGTTTTTAACTTGTGCAGAATCGGTTGGTGGTACAACATATTTAGTGACAGCGGGAGCAG
TAACATCGATTGGTATAGTTGATGGAATATTGGAATAGTATGTCGTATTCGGTTGACAAG
ATGCTATCGGGACCTCATTTGAGTTTGAGTACGATAATGATAGAGGTAAACGCCCCAAAG
ATGAACAACTTAAGACAAGAATACAAAAAAAGACACCCTCCATTAAATAATTTTANACAC
ACATCTATACACATAANAATCTATTTATTATGTTTAGC

consensusID : consensus_10500#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 268
fasta sequence

                              [AGAATTCGTACACTTGGGCAGGAAAACTGGCTTCATGCTTTTCCTCCTTGCAACCACCCGGTTCCTTTTCCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGGTTTTGATTTTGTTAGGGCACGAAATTCCTCCACATCAACAAAGTTATTCTTTCCAGACTGTGGATCACAGTCTAA]

[+] EMBL CD148870             [AGAATTCGTACACTTGGGCAGGAAAACTGGCTTCATGCTTTTCCTCCTTGCAACCACCCGGTTCCTTTTCCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGCTGAAACTGATGGGTTTTGATTTTGTTAGGGCACGAAATTCCTCCACATCAACAAAGTTATTCTTTCCAGACTGTGGATCACAGTCTAA]




>consensus_10500#2
AGAATTCGTACACTTGGGCAGGAAAACTGGCTTCATGCTTTTCCTCCTTGCAACCACCCG
GTTCCTTTTCCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGGTGG
CCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTTGGTTTTTCCACGTTACACCGC
TGAAACTGATGGGTTTTGATTTTGTTAGGGCACGAAATTCCTCCACATCAACAAAGTTAT
TCTTTCCAGACTGTGGATCACAGTCTAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10500#0      TGAAGTTAACACTTTTGGATTATGCTGAGTACANACTAACAGGTAAAGTTGGCCAACATG 60
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ATTTTGACTTATCCGTAAGAACGTTTTTAACTTGTGCAGAATCGGTTGGTGGTACAACAT 120
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ATTTAGTGACAGCGGGAGCAGTAACATCGATTGGTATAGTTGATGGAAATATTGGAATAG 180
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      TATGTCGTATTCGGTTGACAAGATGCTATCGGGACCTCATTTGAGTATGAGTACGATAAT 240
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      GATAGAGGTAAACGCCCAAAAGATGAACAACTTGTTTTAGTAGTCGTATAATGAAGAATT 300
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ATTTGTTTCCAAAAATCTACCAGTTTGTTCTACTTCAGAATTCAAAAATAGCAGCGATGA 360
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ATGATTAGGGTGTTTCTGGACTAATTTATTGCCTATATTCATCACATTGGATAATTTATA 420
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      TTCTCTATCTGCAGATAATATTGTAGCAGGTTTTGTAACAACGTCAGTGGGAAACAGACA 480
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ATCTTGAGAGTAGCTATTACAACTCTCAGATTCTGACAACATGTTTCTAGATTCCCCTAA 540
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ACCAGATGTTAATGTTGATATATTATCTCGTGGGTGAACAATAGCATTAAATCGATCCAA 600
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      TGAATTGCTGATTAAATGAAGTAGATCTGTACCCTCCATATCATCTTCATCGATAAGATC 660
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ATTTGTATCTTTTGAAGATAGATATATGTCAGTAAGATTAGATGGACTCATACTTCGAGC 720
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      ATGTTGTTCTGTATTAGTTAGTCGCACATTTCTTAGTGTCTTTTCTTTGACAGGGCATTT 780
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      AATAGGATTTGTATGAAACTTTAAAGCATTGGACACAGAGTGGTTCAACCCTAATGCGAC 840
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      CATTTGATCTTTTGTGGAGTTTAGTGAACATGTGGGACTAATTATTCGTGATTCGTAAAT 900
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      AGGTTTAGGTTGAATCGAGTGCTGAATGGAACCAGAGGACAGAACGTTTGATGTATTCGT 960
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ------------------------------------------------------------
                                                                                   

consensus_10500#0      GGGAAAAGAATGAGAAACAAAATGGTTATTTGCACAGTCAATTAACCCCTCAACGAAACC 1020
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ----------------------------------------------TTTGAGGTGATTGA 14
                                                                                   

consensus_10500#0      TTCATCTTCCACCAGAAATGGGTTGGTAACATCAACAATCGAAGATCCTGTTAAATGACT 1080
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      GATGGATGTCTTAATAGTTGTGTCTCATGCATTAACGACATATTGGATTGAAATGATTTA 74
                                                                                   

consensus_10500#0      ATTTCCATTGGTAACTATTGCATCTGATTTAGACTGACTTTTTATGAATTCGAAGTGAGT 1140
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      CTATGATTCCATAGATTTTCATCTTGACTAACAAATAAACCCATTGAGTTACATTTGTTA 134
                                                                                   

consensus_10500#0      TTCATGAAACGACGGTTGATTTGCGTTAGTGCTTTCCACTTCTTCGCTCACAAAAAAACA 1200
consensus_10500#2      -----------------------------------------------------------A 1
consensus_10500#1      TTATTAACACTACCATGATGAAGAGAAGGTGAATCAACTGAAGTTGTATGAACAGCAGTT 194
                                                                                   

consensus_10500#0      GAGGTCGTAACACTTGGCAGGAGAGC-TGTCATCAGTGCTTTCCTCACTGCAAACAACCT 1259
consensus_10500#2      GAATTCGTACACTTGGGCAGGAAAAC-TGGCTTCATGCTTTTCCTCCTTGCAACCACCCG 60
consensus_10500#1      GTATTAGTGGTATTAGTAGTTGAGACATTACATAAAAGATTTTTTAAATCCAA--ATTTA 252
                       *   * **     * *         * *  * * *    ***  *   * ***  *    

consensus_10500#0      GTTTCTTTTTCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGG--- 1316
consensus_10500#2      GTTCCTTTTCCTTTTTTAAGCGTCTCTTTTTAGAGACATTCAGGCAATTATTTCCGG--- 117
consensus_10500#1      AATAATTTAACATCTCTATATCATTATCAGTTAACATATTTCGGTTATTGTTAATTAATT 312
                         *  ***  * * * **      * *   *  * * ***  **  *** **        

consensus_10500#0      TGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTT---GGTTTTTCCACGTTA 1373
consensus_10500#2      TGGCCTCTGATTCTACGGAATCCTCAGTTGGAACAAAGACTT---GGTTTTTCCACGTTA 174
consensus_10500#1      CAACAAGTAAATTGTTTGATTCTATGGATGAAGTTAACACTTTTGGATTATGCTGAGTTA 372
                          *   * * *     ** **    * ** *   ** ****   * ** * *   ****

consensus_10500#0      CACC----GCTGAAACTGATGGGTTTTGATTTTG--TTAGG-GCAGGAAATTCCTCCAAA 1426
consensus_10500#2      CACC----GCTGAAACTGATGGGTTTTGATTTTG--TTAGG-GCACGAAATTCCTCCACA 227
consensus_10500#1      CACTAACAGGTAAAGTTGGCCAACAT-GATTTTGACTTATCCGTAAGAACGTTTTTAACT 431
                       ***     * * **  **       * *******  ***   * * ***  *  *  *  

consensus_10500#0      TCAACAAA----GTTATTCTTTCCAGACTCTGGATCACAGTCTAAAGAATAACTATAACC 1482
consensus_10500#2      TCAACAAA----GTTATTCTTTCCAGACTGTGGATCACAGTCTAA--------------- 268
consensus_10500#1      TGTGCAGAATCGGTTGGTGGTACAACATATTTAGTGACAGCGGGAGCAGTAACATCGATT 491
                       *   ** *    ***  *  * * * *   *   * ****    *               

consensus_10500#0      TAGGACCATGTTTTGTTAACTAGTAGTAAAGTGGGTAGCGTTATTTTCTATTGGATATGC 1542
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      GGTATAGTTGATGGAATATTGGAATAGTATGTCGTATTCGGTTGACAAGATGCTATCGGG 551
                                                                                   

consensus_10500#0      CCTCCAGGTAGTGAATATTAACTTCTCACCAATCAGAATTAAATTCTTGATTGGGTGAAC 1602
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      ACCTCATTTGAGTTTGAGTACGATAATGATAGAGGTAAACGCCCCAAAGATGAACAACTT 611
                                                                                   

consensus_10500#0      AATGAACTAAGAGATAGTTTTACTGAACTTTAGTCACTGCGGCGAGTATGACTGTCAGTC 1662
consensus_10500#2      ------------------------------------------------------------
consensus_10500#1      AAGACAAGAATACAAAAAAAGACACCCTCCATTAAATAATTTTANACACACATCTATACA 671
                                                                                   

consensus_10500#0      GCCAGAAAATCTGAACAGATTCACAAAC 1690
consensus_10500#2      ----------------------------
consensus_10500#1      CATAANAATCTATTTATTATGTTTAGC- 698