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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10509#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1060 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTTCTGACATTTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTTCACCATATTTATCTGTATATTGAAAGGCTCTGACCAATCTCAAAATTCCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGGGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAGTAAAATCCAGAGATAGAAAAGAGGACTAGTATTTGCCAGCAAATCCTCAGTTTATTTCTTAAATGGCCTCCACACCGCTGTCGCAAAGTCNGAGCTGGAGCTGACATGACTGATATGACACTAGTTGAACGNAGACGGTGATCCAAGCCTTATAAACTGAGTAATTCGAGTACACTGGGCGATTTGGCTAGGGCATNCTAAGGNNGATAATCACAGCAACGTCCTGGGATGTTCCTCATCCAAACACGACTAGGAACGGGCTAGGACCCATATGTGCCGCCTCACGACTCGCCTTATCCCCGGGAGGTTGCTCTCCAATGCGGTGTGGGTCTGGTTAAGAGAATAAGCAAGGGTTCCAAAGAAAACCCCCCCCTCCTTT]
[+] EMBL AI395564 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTTCTGACATTTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGC AACTTCACCATATTTATCTGTATATTGAAAGGCTCTGACCAATCTCAAAATTCCATCAACA ]
[+] EMBL AI394832 [ TTTTATTTTTTTTTTTTTTTTTTTTTACTTTCTGACATTTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCCGGGTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTTCACCATATTTATCCGTATATTGAAAAGCTCTGTACATTCTCAA ]
[+] EMBL CD076157 [ CATTTGTATTCGATATAATCGGGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGGTGCTACATAAAGAATACCAGGGTACTACGTATAGTAATTCTGAATATGAACCAACGGGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGGACTTTTTCAAATCTGGTTTTATCGGTGGACCTTTTGGCTGCCAATCTGGTGGGCAAACTTCACCATATTTATCTGTATATTGAAAGGGTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGGGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAGTAAAATCCAGAGATAGAAAAGAGGACTAGTATTTGCCAGCAAATCCTCAGTTTATTTCTTAAATGGCCTCCACACCGCTGTCGCAAAGTCNGAGCTGGAGCTGACATGACTGATATGACACTAGTTGAACGNAGACGGTGATCCAAGCCTTATAAACTGAGTAATTCGAGTACACTGGGCGATTTGGCTAGGGCATNCTAAGGNNGATAATCACAGCAACGTCCTGGGATGTTCCTCATCCAAACACGACTAGGAACGGGCTAGGACCCATATGTGCCGCCTCACGACTCGCCTTATCCCCGGGAGGTTGCTCTCCAATGCGGTGTGGGTCTGGTTAAGAGAATAAGCAAGGGTTCCAAAGAAAACCCCCCCCTCCTTT]
consensusID : consensus_10509#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 902 fasta sequence
[ATTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTTCACCATA-TT-ATCTGTATATTGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAGAGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATTGGCCATCCACCACCGCTGTTCCGCAGAAGTCGGGAGCTGGACGCTGTACATGAGCTGCATAATGACGACATAAGTTTGAGACAGAAGAACGGTTGTATCGCAGAGCACCTTTAATAAAACCTTGAAGTAACATCTCCGAACGTCACGACGTAATATGTAGTACAGACTAAGGTGATGCAAGTTAGTGGCGTGCT]
[-] EMBL AF301001 [ATTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTTCACCATATTT ATCTGTATATTGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAGCAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAGAGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATTGGCCATCCACCACCGCTGTTCCGCAGAAGTCGGGAGCTGGACGCTGTACATGAGCTGCATAATGACGACATAAGTTTGAGACAGAAGAACGGTTGTATCGCAGAGCACCTTTAATAAAACCTTGAAGTAACATGTCCGAACGTCA ]
[-] EMBL CD079234 [ AATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTTCACCATATTT ATCTGTATATTGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAGAGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATTGGCCATCCACCACCG ]
[-] EMBL CD082559 [ AACTTCACCATA TT ATCTGTATA TGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAGAGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATTGGCCATCCACCACCGCTGTTCCGCAGAAGTCGGGAGCTGGACGCTGTACATGAGCTGCATAATGACGACATAAGTTTGAGACAGAAGAACGGTTGTATCGCAGAGCACCTTTAATAAAACCTTGAAGTAACATCTCCGAACGTCACGAC ]
[-] EMBL AW017130 [ TCACCATA TTAATCTGTATATTGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAGAGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATTGGCCATCCACCACCGCTGTTCCGCAGAAGTCGGGAGCTGGACGCTGTACATGAGCTGCATAATGACGACATAAGTTTGAGACAGAAGAACGGTTGTATC ]
[-] EMBL CD082441 [ ccCCATA TT ATCTGTATA TGAAAGGCTCTGACCAATCTCAAAACTTCATCNACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAGAGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATTGGCCATCCACCACCGCTGTTCCGCAGAAGTCGGGAGCTGGACGCTGTACATGAGCTGCATAATGACGACATAAGTTTGAGACAGAAGAACGGTTGTATCGCAGAGCACCTTTAATAAAACCTTGAAGTAACATCTCCGAACGTCACGACGTAATATGTAGTACAGACTAAGGTGATGCAAGTTAGTGGCGTGCT]
[-] EMBL CD167269 [ TCTGTATATTGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTG AACGCCGACGACTTCAACTCCTT ATTTTTGAACTCATCAATTCGATCAGAAAATGag ]
[+] EMBL CD060429 [ TATAGCACTTGCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATGTGAATCAGTTGAAACGCCGACGACTTCAACTCCTTCATTTTTGAACTCATCAATTCGATCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAGAGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATCGGCCATCCACCACCGCTGTTCCGCAGAAGTCGGGAGCTGGACGCTGTACATGAGCTGCATAATGACGACATAAGTTTGAGACAGAAGAACGGTTGTATCGC ]
consensusID : consensus_10509#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 660 fasta sequence
[TACTTTCTGACATTTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGGCTGCTACATAANAGAATANCCAGTGTGACTACGTATNAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTAAAACAAACGGGTAATCGCAGATAAAAAGTAAACAATCAGTGAAGGATAACAGTACTTTATGGAAATGTGGAAGTTTATTTAAAAAATGATATATATATAAGATCGCTTATACGAATACATATGATATAGTAGCTGATTGACGTGAAATTAAGAGTGAATGTAACTTCATTAATTGAACAGACTGAAGCTTTTCAATGGCTGATCNTCCATACTTCGAAACACTATGGACCACATCCCGGTATTTTCCAACTTCTGAAGGATAACTGGATAAATGCATTTTAACACCTGTGATTGGTGTACTATAACTACANAACTTTCAGGTNTTTGNGGGCATACTACACAGAACAAATCAAGCGGGAATGATAGTGGGA]
[+] EMBL CD076918 [TACTTTCTGACATTTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGGCTGCTACATAANAGAATANCCAGTGTGACTACGTATNAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTAAAACAAACGGGTAATCGCAGATAAAAAGTAAACAATCAGTGAAGGATAACAGTACTTTATGGAAATGTGGAAGTTTATTTAAAAAATGATATATATATAAGATCGCTTATACGAATACATATGATATAGTAGCTGATTGACGTGAAATTAAGAGTGAATGTAACTTCATTAATTGAACAGACTGAAGCTTTTCAATGGCTGATCNTCCATACTTCGAAACACTATGGACCACATCCCGGTATTTTCCAACTTCTGAAGGATAACTGGATAAATGCATTTTAACACCTGTGATTGGTGTACTATAACTACANAACTTTCAGGTNTTTGNGGGCATACTACACAGAACAAATCAAGCGGGAATGATAGTGGGA]
[-] EMBL CD132360 [ aAGAATA CCAGTGT ACTACGTAT AGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTAAAACAAACGGGTAATCGCAGATAAAAAGTAAACAATCAGTGAAGGATAACAGTACTTTATGGAAATGTGGAAGTTTATTTAAAAAATGATATATATATAAGATCGCTAATACGAATACATATGATATAGTAGCTGATTGACGTGAAATTAGGAGTGA ]
consensusID : consensus_10509#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 615 fasta sequence
[TGACATTTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGAACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTTCACCATATTTATCTGTATATTGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCCTGATCAAAGAAAGAACAAAATCGCTTTGAAAATCACGAATGAATAGGAATTATGGCAACTTATAAAACCCTAAAGTAGGTGATATTTCTAGATCTCCTTAAAACA]
[+] EMBL BF936687 [TGACATTTGTATTCGATATAATCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCTGCCAATCTGCTGGGCAAACTTCACCATATTTATCTGTATATTGAAAGGCTCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGACCCCCTAAACCACCTTCCTGATCAAAGAAAGAACAAAATCGCTTTGAAAATCACGAATGAATAGGAATTATGGCAACTTATAAAACCCTAAAGTAGGTGATATTTCTAGATCTCCTTAAAACA]
[+] EMBL CD076921 [ CATTTGCATTCTTTATAATCGNGGAAATTACAGAAGACATCAAAAAAAAATATGAGTTCATAAACACTGCTGCTACATAAAGAATACCAGAGTACTACGTATAGCAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGAACTTTTTCAGACCTGGTTATATCGGGGGACCTTTTG ]
[+] EMBL CD136652 [ ttcCTTCATAAAGAATACCAGTGTACTACGTATAGTAATTCTGAATATGAACCAACGTGTATTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAACCTTATGAAAATATTCCTTGGACTTTTTCAGATCTGGGTTTATCGTTGGACCTTTTGGC ]
[-] EMBL BG930600 [ TCTGACCAATCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGATTATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAAGGACCCCATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGAC ]
consensusID : consensus_10509#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 344 fasta sequence
[ATTCGATTTAATCGGGGAAATTACAGAAGACATAAAAAAAAAATTTGAGTTCATAAACCCTGGTGGTACATAAAAAATACCAGGGTACTACGTATAGTAATTCTGAATATGAACCAACGGGTTTTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTTTGATACATTTAATTAACCTTATGAAAATATTCCTTGGACTTTTTCAAATCTGGTTTTATCGGGGGACCTTTTGGGTGCCAATTTGGTGGGCAAACTTCACCATATTTATTTGTATATTGAAAGGGTTTGACCAATTTCAAAACTTTATCAACAGATTTTCCAACAGGAAAATCG]
[+] EMBL CD076040 [ATTCGATTTAATCGGGGAAATTACAGAAGACATAAAAAAAAAATTTGAGTTCATAAACCCTGGTGGTACATAAAAAATACCAGGGTACTACGTATAGTAATTCTGAATATGAACCAACGGGTTTTAATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTTTGATACATTTAATTAACCTTATGAAAATATTCCTTGGACTTTTTCAAATCTGGTTTTATCGGGGGACCTTTTGGGTGCCAATTTGGTGGGCAAACTTCACCATATTTATTTGTATATTGAAAGGGTTTGACCAATTTCAAAACTTTATCAACAGATTTTCCAACAGGAAAATCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10509#0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCTTCTGACATTTGTATTCGATATAA 60
consensus_10509#1 --------------------------------------------ATTGTATTCGATATAA 16
consensus_10509#3 ---------------------------------------TGACATTTGTATTCGATATAA 21
consensus_10509#4 -------------------------------------------------ATTCGATTTAA 11
consensus_10509#2 --------------------------------TACTTTCTGACATTTGTATTCGATATAA 28
******* ***
consensus_10509#0 TCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTG-CTGCTACA 119
consensus_10509#1 TCGTGGAAATTACAGAAGACATAAAAAAAAA-TATGAGTTCATAAACACTG-CTGCTACA 74
consensus_10509#3 TCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTG-CTGCTACA 80
consensus_10509#4 TCGGGGAAATTACAGAAGACATAAAAAAAAAATTTGAGTTCATAAACCCTG-GTGGTACA 70
consensus_10509#2 TCGTGGAAATTACAGAAGACATAAAAAAAAAATATGAGTTCATAAACACTGGCTGCTACA 88
*** *************************** * ************* *** ** ****
consensus_10509#0 TAAA-GAATACC-AGTGT-ACTACGTATA-GTAATTCTGAATATGAACCAACGTGTATTA 175
consensus_10509#1 TAAA-GAATACC-AGTGT-ACTACGTATA-GTAATTCTGAATATGAACCAACGTGTATTA 130
consensus_10509#3 TAAA-GAATACC-AGTGT-ACTACGTATA-GTAATTCTGAATATGAACCAACGTGTATTA 136
consensus_10509#4 TAAA-AAATACC-AGGGT-ACTACGTATA-GTAATTCTGAATATGAACCAACGGGTTTTA 126
consensus_10509#2 TAANAGAATANCCAGTGTGACTACGTATNAGTAATTCTGAATATGAACCAACGTGTATTA 148
*** **** * ** ** ********* *********************** ** ***
consensus_10509#0 ATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAA 235
consensus_10509#1 ATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAA 190
consensus_10509#3 ATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAA 196
consensus_10509#4 ATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTTTGATACATTTAATTAA 186
consensus_10509#2 ATATACGTCTGTATCAGGTTTAAATATGACTTCACAGGGAACTATGATACATTTAATTAA 208
******************************************* ****************
consensus_10509#0 CCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCT 295
consensus_10509#1 CCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCT 250
consensus_10509#3 CCTTATGAAAATATTCCTTGAACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCT 256
consensus_10509#4 CCTTATGAAAATATTCCTTGGACTTTTTCAAATCTGGTTTTATCGGGGGACCTTTTGGGT 246
consensus_10509#2 CCTTATGAAAATATTCCTTGTACTTTTTCAGATCTGGTTTTATCGTTGGACCTTTTGGCT 268
******************** ********* ************** *********** *
consensus_10509#0 GCCAATCTGCTGGGCAAACTTCACCATATTTAT--CTGTATATTGAAAGGCTCTGACCAA 353
consensus_10509#1 GCCAATCTGCTGGGCAAACTTCACCATATT-AT--CTGTATATTGAAAGGCTCTGACCAA 307
consensus_10509#3 GCCAATCTGCTGGGCAAACTTCACCATATTTAT--CTGTATATTGAAAGGCTCTGACCAA 314
consensus_10509#4 GCCAATTTGGTGGGCAAACTTCACCATATTTAT--TTGTATATTGAAAGGGTTTGACCAA 304
consensus_10509#2 GCCAATCTGCTGGGCAAACTAAAACAAACGGGTAATCGCAGATAAAAAG----TAAACAA 324
****** ** ********** * ** * * * * ** **** * * ***
consensus_10509#0 TCTCAAAATTCCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGAT 413
consensus_10509#1 TCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGAT 367
consensus_10509#3 TCTCAAAACTTCATCAACAGATCTTCCAACAGGAAGATCGTTAATAGTAATCTGGCGGAT 374
consensus_10509#4 TTTCAAAACTTTATCAACAGATTTTCCAACAGGAAAATCG-------------------- 344
consensus_10509#2 TCAGTGAAGGATAACAGTAC-TTTATGGAAATGTGGAAGTTTATTTAAAAAATGATATAT 383
* ** * ** * * * * * * *
consensus_10509#0 -TATACCATCAGCACTAATGATAAATAAACCGGGAAGGGCAACACCTAACTCTTCGTGAA 472
consensus_10509#1 -TATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAA 426
consensus_10509#3 -TATACCATCAGCACTAATGATAAATAAACCGCGAAGGGCAACACCTAACTCTTCGTGAA 433
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 ATATAAGATCGCTTATACGAATACATATGATATAGTAGCTGAT---TGACGTGAAATTAA 440
consensus_10509#0 GGACCC-CATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGA 531
consensus_10509#1 GGACCC-CATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGA 485
consensus_10509#3 GGACCC-CATAATCGCGTGTAACTTGTTTCTGATAGTCCGCCAAGAGTGGATAGCGTAGA 492
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 GAGTGAATGTAACTTCATTAATTGAACAGACTGAAGCTTTTCAATGGCTGATCNTCCATA 500
consensus_10509#0 CCCCCTAA-ACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATG-TG 589
consensus_10509#1 CCCCCTAA-ACCACCTTCTTTACGTGGAGTATTTATCCAAGCCAGATGACTGAAATG-TG 543
consensus_10509#3 CCCCCTAA-ACCACCTTCCTGAT-CAAAGAAAGAACAAAATCGCTTTGA--AAATCA-CG 547
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 CTTCGAAACACTATGGACCACAT-CCCGGTATTTTCCAACTTCTGAAGGATAACTGGATA 559
consensus_10509#0 AATCAGTTGAAACGCCGACGACTT-CAACTCCTTCATTT---TTGAACTCATCAATTCGA 645
consensus_10509#1 AATCAGTTGAAACGCCGACGACTT-CAACTCCTTCATTT---TTGAACTCATCAATTCGA 599
consensus_10509#3 AATGAATAGGAATTATGGCAACTTATAAAACCCTAAAGTAGGTGATATTTCTAGATCTCC 607
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 AATGCATTTTAACACCTGTGATTGGTG--TACTATAACTA--CANAACTTTCAGGT---N 612
consensus_10509#0 TCAGAAAATGCAGTTAACTCAGTTGGACACACAAA-GTAAAATCCAGAG-ATAGAAAA-G 702
consensus_10509#1 TCAGAAAATGCAGTTAACTCAGTTGGACACACAAAAGTAAAATCCAGAGGATAGAAAAAG 659
consensus_10509#3 TTAAAACA---------------------------------------------------- 615
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 TTTGNGGGCATACTACACAGAACAAATCAAGCGGGAATGATAGTGGGA------------ 660
consensus_10509#0 AGGACTA-GTATTTGCCAGCAAA--TCCTCAGTTT-ATTTCTT-AAATGGCCTCCACACC 757
consensus_10509#1 AGGACTAAGTATTTGCCAGCAAAATCTCTCAGTTTTATTTCTTTAAATTGGCCATCCACC 719
consensus_10509#3 ------------------------------------------------------------
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 ------------------------------------------------------------
consensus_10509#0 GCTGTCGCAAAGTCNGAGCTGGAGCTGACATGACTGATATGACACTAGTTGAACGNAGAC 817
consensus_10509#1 ACCGCTGTTCCGCAGAAGTCGG----GAGCTGGACGCTGT-ACATGAGCTGCATAATGAC 774
consensus_10509#3 ------------------------------------------------------------
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 ------------------------------------------------------------
consensus_10509#0 GGTGATCCAAGCCTTATAAACTGAGTAATTCGAGTACACTGGGCGATTTGGCTAGGGCAT 877
consensus_10509#1 GACA---TAAGTTTGA--GACAGAAGAA--CGGTTGTATCG-----------CAGAGCAC 816
consensus_10509#3 ------------------------------------------------------------
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 ------------------------------------------------------------
consensus_10509#0 NCTAAGGNNGATAATCACAGCAACGTCCTGGGATGTTCCTCATCCAAACACGACTAGGAA 937
consensus_10509#1 CTTTAATAAAACCTTGA-AGTAACATCTCCGAACGTCACGACGTAATATGTAGTACAGAC 875
consensus_10509#3 ------------------------------------------------------------
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 ------------------------------------------------------------
consensus_10509#0 CGGGCTAGGACCCATATGTGCCGCCTCACGACTCGCCTTATCCCCGGGAGGTTGCTCTCC 997
consensus_10509#1 TAAGGTGATGCAAGTTAGTGGCGTGCT--------------------------------- 902
consensus_10509#3 ------------------------------------------------------------
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 ------------------------------------------------------------
consensus_10509#0 AATGCGGTGTGGGTCTGGTTAAGAGAATAAGCAAGGGTTCCAAAGAAAACCCCCCCCTCC 1057
consensus_10509#1 ------------------------------------------------------------
consensus_10509#3 ------------------------------------------------------------
consensus_10509#4 ------------------------------------------------------------
consensus_10509#2 ------------------------------------------------------------
consensus_10509#0 TTT 1060
consensus_10509#1 ---
consensus_10509#3 ---
consensus_10509#4 ---
consensus_10509#2 ---
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||