|
These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10516#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 937 fasta sequence
[CCTTAACTTTTGGAGGGAGTTTTGCAAACAGTTTAGTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTCACCTATGGGTAAAGTTCCATTACTTATGAATCATGGTGATAAATTACTTGAATCTGATTTAATTATGCGATTTTTGGATGAATTAAATGGTGAAAAAACTTCATTAATGAATGTATGTGGTGTAGAGAATTTTCAAAATGCTATGGAATTATCTAAAAAGTTTTTCAGTCCTGGACATACTATATTATATGAAGTGACCTTTAGTGAATCAGATGTGGTGAAATTTCGTGAAGCTTGTTCTGAGTTGGAAAATTTAATCAATAGTAAATATTTTGCCGGAAACCAATTGAGCTTGGCTGATTTAATCCTCTTCCCTATGATTGATTACTTTGAAGTAATATTGGGTATTATTCATCATATAAATTGTGATCAAGTTCATGAAATGAAATCAGATAATGAATTATATAATGAAGCTACAACATGGCCAAATCTACTTAATTACTTAATTACAATGAGACAAGAATCTTTTGTCAATGATATACGAATATCAACTAATATTAAAGCGAAATTTGTTGCTTCTAAACGAGCTGGTTTATCAGATCCTGATATTCAGTAGGTGAAGATAATCATAATAATGAAAATATAATGTGT]
[-] EMBL CD136660 [CCTTAACTTTTGGAGGGAGTTTTGCAAACAGTTTAGTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTCACCTATGGGTAAAGT ]
[-] EMBL CD073944 [ TAAATTGACTTTAAGTACCCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTCACCTATGGGTAAAGTTCCATTACTTATGAATCATGGTGATAAATTACTTGAATCTGATTTAATTATGCGATTTTTGGATGAATTAAATGGTGAAAAAACTTCATTAATGAATGTATGTGGTGTAGAGAATTTTCAAAATGCTATGGAATTATCTAAAAAGTTTTTCAGTCCTGGACATACTATATTATATGAAGTGACCTTTAGTGAATCAGATGTGGTGAAATTTCGTGAAGCTTGTTCTGAGTTGGAAAATTTAATCAATAGTAAATATTTTGCCGGAAACCAATTGAGCTTGGCTGATTTAATCCTCTTCCCTATGATTGATTACTTTGAAGTAATATTGGGTATTATTCATCATATAAATTGTGATCAAGTTCATGAAATGAAATCAGATAATGAATTATATAATGAAGCTACAACATGGCCAAATCTACTTAATTACTTAATTACAATGAGACAAGAATCTTTTGTCAATGATATACGAATATCAACTAATATTAAAGCGAAATTTGTTGCTTCTAAACGAGCTGGTTTATCAGATCCTGATATTCAGTAGGTGAAGATAATCATAATAATGAAAATATAATGTGT]
consensusID : consensus_10516#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 712 fasta sequence
[ACTAATATGCGAACACACTGAAATACAACGTTATAATATAATGACCAACATTTCTATGTGAAAATCAAATGATCACGAGATAGCTTTTTCTTGTGTATTTACTAAACTGCATGATGTGATATATAAGAACATTTTTAAAGCAGCATACATAAACATAAAGGTTGGAGTAAAATTATTAAACTAGCGAAACATGATCATGTTAATCAAATTTACCAAAAAGTAGTTACTATATACATAACAAAATATTTTGGTAAAAGTCTATTTAAAGTACCTGAGGCTCCTGTCATATTCGACTAACCAACGAATGCAACTCATTACCTCAATATGTGATTGAAGATTCATCTATCAACACTTTTGGAATAAAGATAGATCAACTGAGAGACCACCATTAACAGGACTAACACAGGACGCTGGGCCTCCTGTCCTTTCCACACTGAAAATGATACTAATTTATACGAAAAACTATCAGGCTTAGGAAAATAATTGACGGGGGATTTGAATGATATTATAGGACACATAGTTGTGGTAGAGGTTCAGCCACTTTTTACGAACAAATTTAAGTCTGGAATGTCACCTTAAANGGAAAATGANCATTCAATAAGTGTATGAGGCANGGGTTGGACNANTTCANTTCCGAAAGTAGGACGACAGCCTANCGATATGCATTTGCTANNTATAATNTGAAAATTTTCGAAGAACATTTGAATCTCCA]
[+] EMBL CD191748 [ACTAATATGCGAACACACTGAAATACAACGTTATAATATAATGACCAACATTTCTATGTGAAAATCAAATGATCACGAGATAGCTTTTTCTTGTGTATTTACTAAACTGCATGATGTGATATATAAGAACATTTTTAAAGCAGCATACATAAACATAAAGGTTGGAGTAAAATTATTAAACTAGCGAAACATGATCATGTTAATCAAATTTACCAAAAAGTAGTTACTATATACATAACAAAATATTTTGGTAAAAGTCTATTTAAAGTACCTGAGGCTCCTGTCATATTCGACTAACCAACGAATGCAACTCATTACCTCAATATGTGATTGAAGATTCATCTATCAACACTTTTGGAATAAAGATAGATCAACTGAGAGACCACCATTAACAGGACTAACACAGGACGCTGGGCCTCCTGTCCTTTCCACACTGAAAATGATACTAATTTATACGAAAAACTATCAGGCTTAGGAAAATAATTGACGGGGGATTTGAATGATATTATAGGACACATAGTTGTGGTAGAGGTTCAGCCACTTTTTACGAACAAATTTAAGTCTGGAATGTCACCTTAAANGGAAAATGANCATTCAATAAGTGTATGAGGCANGGGTTGGACNANTTCANTTCCGAAAGTAGGACGACAGCCTANCGATATGCATTTGCTANNTATAATNTGAAAATTTTCGAAGAACATTTGAATCTCCA]
consensusID : consensus_10516#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence
[GAGGCCAGAATTTGGCACGAGGAACTTAATTAACACGATCATGTTTCGCTAGTTTAATAATTTTACTCCAACCTTTATGTTTATGTATGTTGCTTTAAAAATGTTCTTATATATCACATCATGCAGTTTAGTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATGTTGGTCATTATATTATAACGTTGTATTTCAGTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACCAACAGTAATGAAGCATCTTAAAAATGGTGATCCGGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTCGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTCACCTATGGGTAAAGTTCCATTACTTATGAATCATGGTGATAA]
[+] EMBL CD079684 [GAGGCCAGAATTTGGCACGAGGAACTTAATTAACACGATCATGTTTCGCTAGTTTAATAATTTTACTCCAACCTTTATGTTTATGTATGTTGCTTTAAAAATGTTCTTATATATCACATCATGCAGTTTAGTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATGTTGGTCATTATATTATAACGTTGTATTTCAGTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACCAACAGTAATGAAGCATCTTAAAAATGGTGATCCGGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTCGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTCACCTATGGGTAAAGTTCCATTACTTATGAATCATGGTGATAA]
consensusID : consensus_10516#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 467 fasta sequence
[TTGGCAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTTTAGTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCACTTCTGTGAACGTGTTAAATTGACTTTATACGTTACCAC-AAATAGATTATGAGTTTAATATCAGTCTCACTTAATGATAAACCACGATTGGTTAATAAAATATCA]
[-] EMBL CD167411 [TTGGCAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTTTAGTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCACTTCTGTGAACGTGTTAAATTGACTTTATACGTTACCAC AAATAGATTATGAGTTTAATATCAGTCTCACTTAATGATAAACCACGATTGGTTAATAAAATATCA]
[-] EMBL CD167267 [TTTGCAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCCCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTTTAGTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTACCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCA TTCTGTGAACGTGTTAAATTGACTTTA A GTTACCACAAAATTGATTATGA TTTAATATTAGTCTCAC TAATGATAAACCA GATTGGTTAATAAAA ATCA]
consensusID : consensus_10516#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 402 fasta sequence
[TTTGCAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCA-TAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCAC-AAATTGATTATGATTTAATATTAGTCTCAC-TAATGATAAACCAGATTGGT--ATATAATATTC]
[-] EMBL CD065726 [TTTGCAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCAGTAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCAC AAATTGATTATGATTTAATATTAGTCTCAC TAATGATAAACCAGATTGGT ATATAATA ]
[-] EMBL CD065538 [TTTGCAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCA TAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATT ]
[+] EMBL CD167368 [ TTG AAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCA TAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTGTGTTCGCATATTAGTGTCATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAACGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTC]
consensusID : consensus_10516#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 380 fasta sequence
[GGNACCGACGGCTCACGGAACTTTGGAGGGAGTTGAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGAT-AAACCAGATTGGTTAATAAAATATTC]
[+] EMBL CD128247 [GGNACCGACGGCTCACGGAACTTTGGAGGGAGTTGAAACAGGTCGGTCCTGTGCAGTGAAGAAACACTATTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAGTTTCAAAACTGTGCTCCTAGCAAGGTGGCGTTGGTGATTCAATAAAAATGTACATTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGAT AAACCAGATTGGTTAATAAAATATTC]
[+] EMBL CD167305 [ GTTGTTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAAAGCAGATTGGTTAATAAAATATTC]
consensusID : consensus_10516#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 296 fasta sequence
[GTCCGACGGCTCACGGAAC-TTTGGAGGGAGTTGAACAGTGTGTTCGCATATTAG-TGTC-ATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTC]
[+] EMBL CD167303 [GTCCGACGGCTCACGGAAC TTTGGAGGGAGTTTGACAGTGTGTTCGCATATTAG TGTC ATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACATTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAGTAAAATATTC]
[+] EMBL CD167278 [ CCGACGGCTCACGGAACTTTTGGAGGGAGTTGAACAGTGTGTTCGCATATTAG TGTC ATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTC]
[+] EMBL CD167363 [ TTGAACAGTGTGTTCGCATATTAG TGTC ATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTC]
[+] EMBL CD167226 [ ttttgcaAACAGTGTGTTCGCATATTAG TGTC ATTTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTGTTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTGTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTCATAAAATATTC]
[+] EMBL CD167374 [ TTCGCATATTAG TGTC A TTTCAACGTGTAGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTAGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTGGTTAATAAAATATTC]
[+] EMBL CD167340 [ ATATCCGTTGTCGATCTTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAAAACACACAGTAATGAAGCATCTTAAAAATGGTGATCCAGAACCGTTTGTCGATCCAAACAGATACACGTTATTTGCTTTTTGTTTTTGTCCATTCTGTGAACGTGTTAAATTGACTTTAAGTTACCACAAAATTGATTATGATTTAATATTAGTCTCACTTAATGATAAACCAGATTAGTTAATAAAATATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10516#0 ------------------------------------------------------------
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------GAGGCC 6
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 -----------------------------------------------------GGNACCG 7
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ACTAATATGCGAACACACTGAAATACAACGTTATAATATAATGACCAACATTTCTATGTG 60
consensus_10516#0 ------------------------------------------------------------
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 AGAATTTGGCACGAGGAACTTAATTAACACGATCATGTTTCGCTAGTTTAATAATTTTAC 66
consensus_10516#3 -------------------------TTGGCAAACAGGTCGGTCCTGTGCAGTGAAGAAAC 35
consensus_10516#5 ACGGCTCACGGAACTTTGGAGGGAGTTG--AAACAGGTCGGTCCTGTGCAGTGAAGAAAC 65
consensus_10516#4 -------------------------TTTGCAAACAGGTCGGTCCTGTGCAGTGAAGAAAC 35
consensus_10516#1 AAAATCAAATGATCACGAGATAGCTTTTTCTTGTGTATTTACTAAACTGCATGATGTGAT 120
consensus_10516#0 -----------------------------CCTTAACTTTTGGAGGGAGTTTTGCAAACAG 31
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 TCCAACCTTTATGTTTATGTATGTTGCTTTAAAAATGTTCTTATATATCACATCATGCAG 126
consensus_10516#3 ACTA--TTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAG 93
consensus_10516#5 ACTA--TTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAG 123
consensus_10516#4 ACTA--TTATCTTTACATCATAGCGACCTTCGTCAAAGTTATCGAAATCGTAGTCTTGAG 93
consensus_10516#1 ATATAAGAACATTTTTAAAGCAGCATACATAAACATAAAGGTTGGAGTAAAATTATTAAA 180
consensus_10516#0 TTTAGTAAATACACAAG-AAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAAT-- 88
consensus_10516#6 -------------------GTCCGACGGCTCACGGAACTTTGGAGGG-AGTTGAACAG-- 38
consensus_10516#2 TTTAGTAAATACACAAG-AAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATGT 185
consensus_10516#3 TTTCAAAACTGTGCTCCTAGCAAGGTGGCGT-TGGTGATTCAATAAAAATGTACATTTTA 152
consensus_10516#5 TTTCAAAACTGTGCTCCTAGCAAGGTGGCGT-TGGTGATTCAATAAAAATGTACATT--- 179
consensus_10516#4 TTTCAAAACTGTGCTCCTAGCAAGGTGGCGT-TGGTGATTCAATAAAAATGTACATT--- 149
consensus_10516#1 CTAGCGAAACATGATCATGTTAATCAAATTTACCAAAAAGTAGTTACTATATACATAACA 240
* * *
consensus_10516#0 -----------------------------------------------------TGTGTTC 95
consensus_10516#6 -----------------------------------------------------TGTGTTC 45
consensus_10516#2 TGGTCATTATATTATAACGTTGTATTTC-----------------------AGTGTGTTC 222
consensus_10516#3 GTAAATACACAAGAAAAAGCTATCTCGTGATCATTTGATTTTCACATAGAAATTGTGTTC 212
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------GTGTTC 155
consensus_10516#1 AAATATTTTGGTAAAAGTCTATTTAAAGTACCTGAGGCTCCTGTCATATTCGACTAACCA 300
consensus_10516#0 GCATATTAGTGTCATT--TTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAA 153
consensus_10516#6 GCATATTAGTGTCATT--TTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAA 103
consensus_10516#2 GCATATTAGTGTCATT--TTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAA 280
consensus_10516#3 GCATATTAGTGTCATT--TTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAA 270
consensus_10516#5 ----------------------------------------------------ATTTTCAA 187
consensus_10516#4 GCATATTAGTGTCATT--TTCAACGTGTTGCCTTATTATCATTCTTCAAAGTATTTTCAA 213
consensus_10516#1 ACGAATGCAACTCATTACCTCAATATGTGATTGAAGATTCATCTATCAACACTTTTGGAA 360
*** **
consensus_10516#0 AACACACAG------TAATGAAGCATC-TTAAAAATGGTGATCCAGAAC-------CGTT 199
consensus_10516#6 AACACACAG------TAATGAAGCATC-TTAAAAATGGTGATCCAGAAC-------CGTT 149
consensus_10516#2 AACCAACAG------TAATGAAGCATC-TTAAAAATGGTGATCCGGAAC-------CGTT 326
consensus_10516#3 AACACACAG------TAATGAAGCATC-TTAAAAATGGTGATCCAGAAC-------CGTT 316
consensus_10516#5 AACACACAG------TAATGAAGCATC-TTAAAAATGGTGATCCAGAAC-------CGTT 233
consensus_10516#4 AACACACAG------TAATGAAGCATC-TTAAAAATGGTGATCCAGAAC-------CGTT 259
consensus_10516#1 TAAAGATAGATCAACTGAGAGACCACCATTAACAGGACTAACACAGGACGCTGGGCCTCC 420
* * ** * * * ** * **** * * * * * ** *
consensus_10516#0 TGTCGAT-CCAAACAGATAC--ACGTTATTTGCTTTTTGTTTTTGTCCA-TTCTGTGAAC 255
consensus_10516#6 TGTCGAT-CCAAACAGATAC--ACGTTATTTGCTTTTTGTTTTTGTCCA-TTCTGTGAAC 205
consensus_10516#2 TGTCGAT-CCAAACAGATAC--ACGTTATTTGCTTTTCGTTTTTGTCCA-TTCTGTGAAC 382
consensus_10516#3 TGTCGAT-CCAAACAGATAC--ACGTTATTTGCTTTTTGTTTTTGTCCACTTCTGTGAAC 373
consensus_10516#5 TGTCGAT-CCAAACAGATAC--ACGTTATTTGCTTTTTGTTTTTGTCCA-TTCTGTGAAC 289
consensus_10516#4 TGTCGAT-CCAAACAGATAC--ACGTTATTTGCTTTTTGTTTTTGTCCA-TTCTGTGAAC 315
consensus_10516#1 TGTCCTTTCCACACTGAAAATGATACTAATTTATACGAAAAACTATCAGGCTTAGGAAAA 480
**** * *** ** ** * * ** ** * * ** * * **
consensus_10516#0 GTGTTAA-ATTGACTTTAA--GTTACCACAAAAT---TGATTATGA-TTTAATATTAGTC 308
consensus_10516#6 GTGTTAA-ATTGACTTTAA--GTTACCACAAAAT---TGATTATGA-TTTAATATTAGTC 258
consensus_10516#2 GTGTTAA-ATTGACTTTAA--GTTACCACAAAAT---TGATTATGA-TTTAATATTAGTC 435
consensus_10516#3 GTGTTAA-ATTGACTTTATACGTTACCACAAA-T---AGATTATGAGTTTAATATCAGTC 428
consensus_10516#5 GTGTTAA-ATTGACTTTAA--GTTACCACAAAAT---TGATTATGA-TTTAATATTAGTC 342
consensus_10516#4 GTGTTAA-ATTGACTTTAA--GTTACCACAAA-T---TGATTATGA-TTTAATATTAGTC 367
consensus_10516#1 TAATTGACGGGGGATTTGAATGATATTATAGGACACATAGTTGTGG-TAGAGGTTCAGCC 539
** * * *** * ** * * ** ** * * * ** *
consensus_10516#0 TCACTTAATGATAAACCA-GATTGGTTAATAAAATATTCACCTATGGGTAAAGTTCCATT 367
consensus_10516#6 TCACTTAATGATAAACCA-GATTGGTTAATAAAATATTC--------------------- 296
consensus_10516#2 TCACTTAATGATAAACCA-GATTGGTTAATAAAATATTCACCTATGGGTAAAGTTCCATT 494
consensus_10516#3 TCACTTAATGATAAACCACGATTGGTTAATAAAATATCA--------------------- 467
consensus_10516#5 TCACTTAATGATAAACCA-GATTGGTTAATAAAATATTC--------------------- 380
consensus_10516#4 TCACT-AATGATAAACCA-GATTGGT--ATATAATATTC--------------------- 402
consensus_10516#1 ACTTTTTACGAACAAATTTAAGTCTGGAATGTCACCTTAAANGGAAAATGANCATTCAAT 599
* * * ** ** * * ** * *
consensus_10516#0 ACTTATGAATCATGGTGATAAATTACTTGAATCTGATTTAATTATGCGATTTTTGGATGA 427
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ACTTATGAATCATGGTGATAA--------------------------------------- 515
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 AAGTGTATGAGGCANGGGTTGGACNANTTCANTTCCGAAAGTAGGACGACAGCCTANCGA 659
consensus_10516#0 ATTAAATGGTGAAAAAACTTCATTAATGAATGTATGTGGTGTAGAGAATTTTCAAAATGC 487
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 TATGCATTTGCTANNTATAATNTGAAAATTTTCGAAGAACATTTGAATCTCCA------- 712
consensus_10516#0 TATGGAATTATCTAAAAAGTTTTTCAGTCCTGGACATACTATATTATATGAAGTGACCTT 547
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#0 TAGTGAATCAGATGTGGTGAAATTTCGTGAAGCTTGTTCTGAGTTGGAAAATTTAATCAA 607
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#0 TAGTAAATATTTTGCCGGAAACCAATTGAGCTTGGCTGATTTAATCCTCTTCCCTATGAT 667
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#0 TGATTACTTTGAAGTAATATTGGGTATTATTCATCATATAAATTGTGATCAAGTTCATGA 727
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#0 AATGAAATCAGATAATGAATTATATAATGAAGCTACAACATGGCCAAATCTACTTAATTA 787
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#0 CTTAATTACAATGAGACAAGAATCTTTTGTCAATGATATACGAATATCAACTAATATTAA 847
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#0 AGCGAAATTTGTTGCTTCTAAACGAGCTGGTTTATCAGATCCTGATATTCAGTAGGTGAA 907
consensus_10516#6 ------------------------------------------------------------
consensus_10516#2 ------------------------------------------------------------
consensus_10516#3 ------------------------------------------------------------
consensus_10516#5 ------------------------------------------------------------
consensus_10516#4 ------------------------------------------------------------
consensus_10516#1 ------------------------------------------------------------
consensus_10516#0 GATAATCATAATAATGAAAATATAATGTGT 937
consensus_10516#6 ------------------------------
consensus_10516#2 ------------------------------
consensus_10516#3 ------------------------------
consensus_10516#5 ------------------------------
consensus_10516#4 ------------------------------
consensus_10516#1 ------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||