cluster # 10518

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Schistosoma mansoni
cluster # 10518 cluster # 10518 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10518#0 length = 1606 sequences # 15

consensus_10518#1 length = 260 sequences # 2

consensusID : consensus_10518#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1606
fasta sequence

                              [CGACGTCTTCATCTTGGTAGTCATTATTCAAATCTGTATTTTTGAAAGTAGTTATAACAGTAGGTCGCGAGACGGTCGGGAATGTCCCTTCGTTTCCAAGTTATGGCGAGACGACTTATTTGGTTTAGTTAACTTGGGAACGTGTTGACTACTATCAGCTCCTTTTGTCCCTCCCTTATTATCGCGTGTTTTGAGAGTTAACTGACTTTGGAAGGGTGTTAATATGTCTTTTGACGACTTTTGCTTGACTCGAGCGGTCGACAGTTCGTCATTTATCTTTGGTTTTAGTGTAGAGAAAGATAATCGTAGAGCAGGAGATGAAAGTGTGGATGTTGAAGACAACGAG---GAAGACAACTGAGATGATGGTGACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTTCTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGGGTGGAAGAACAATCATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGTAGATTTATGAGTCTTAGGCGGACGTCCACGCGATTTCTTAGAAAAACCAGAATATGTTGAAAAGGCCGAAAAAGCTGAGGAATCAGGAGGGGTATGGCCACCAGAAGAGGCAAGGGCAGGGACAGTTGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCGTTGTTTTCACTTCTAAAAGGCAACGGTTTTATGCGTATAGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAACTGGAATCACAGCTAGGAGGGACAGCTGACATACCGTTGGAGAAACTAGGTCTTGAAT-GTGTTTCGTTGCATCGC-TTTCTTTTGTGTGATTTTCTT-T-TTGTTGGAGT-AGGTAGAAG-AGGTATA-GATAGTTTCATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGAAATGCAGCACTTGGTTTCCGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTT-AAGTTAT-CTTC-AG-TAACATTCTTCATAGTATCTGGCCAATGTGAGTCACGTCGAGACGTAGAATGCTGTGACACAGGACACCAAACAGGTGAATTTGTTCCAGTGGATTTACGAGATTTGAATACCTGCATTTCAGGCGATACGTTGAAGCCTTCATTGTGAGATCTAGTAGATAGTGGATGCCTGCCAGGTCTTTTCTTTTTTAAAGAGGGAGAAATAGCATTTTTCAGGAATGTTCCATTAGATATAGACTCATTGATTAGATTATTTCTTATCGAATCTATCGAGATAGGTTCAGTCAGCATCTTGTTTGGCGAATGATCAGAGTAATTCTTCATTTGCCTATCAAAAATAGCTTGGTTTGTT]

[-] EMBL CD117750             [CGACGTCTTCATCTTGGTAGTCATTATTCAAATCTGTATTTTTGAAAGTAGTTATAACAGTAGGTCGCGAGACGGTCGGGAATGTCCCTTCGTTTCCAAGTTATGGCGAGACGACTTATTTGGTTTAGTTAACTTGGGAACGTGTTGACTACTATCAGCTCCTTTTGTCCCTCCCTTATTATCGCGTGTTTTGAGAGTTAACTGACTTTGGAAGGGTGTTAATATGTCTTTTGACGACTTTTGCTTGACTCGAGCGGTCGACAGTTCGTCATTTATCTTTGGTTTTAGTGTAGAGAAAGATAATCGTAGAGCAGGAGATGAAAGTGTGGATGTTGAAGACAACGAG   GAAGACAACTGAGATGATGGTGACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD117792             [   CGTCTTCATCTTGGTAGTCATTATTCAAATCTGTATTTTTGAAAGTAGTTATAACAGTAGGTCGCGAGACGGTCGGGAATGTCCCTTCGTTTCCAAGTTATGGCGAGACGACTTATTTGGTTTAGTTAACTTGGGAACGTGTTGACTACTATCAGCTCCTTTTGTCCCTCCCTTATTATCGCGTGTTTTGAGAGTTAACTGACTTTGGAAGGGTGTTAATATGTCTTTTGACGACTTTTGCTTGACTCGAGCGGTCGACAGTTCGTCATTTATCTTTGGTTTTAGTGTAGAGAAAGATAATCGTAGAGCAGGAGATGAAAGTGTGGATGTTGAAGACAACGAG   GAAGACAACTGAGATGATGGTGACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD092800             [                                                                                                                         GGTTTAGTTAACTTGGGAACGTGTTGACTACTATCAGCTCCTTTTGTCCCTTCCTTATTATCGCGTGTTTTGAGAGTTAACTGACTTTGGAAGGGTGTTAATATGTCTTTTGACGACTTTTGCTTGACTCGAGCGGTCGACAGTTCGTCATTTATCTTTGGTTTTAGTGTAGAGAAAGATAATCGTAGAGCAGGAGATGAAAGTGTGGATGTTGAAGACAACGAGGAAGAAGACAACTGAGATGATGATGACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTTCTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGNGTGGAAGAACAATCATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD117397             [                                                                                                                                      TGGGAACGTGTTGACTACTATCAGCTCCTTTTGTCCCTCCCTTATTATCGCGTGTTTTGAGAGTTAACTGACTTTGGAAGGGTGTTAATATGTCTTTTGACGACTTTTGCTTGACTCGAGCGGTCGACAGTTCGTCATTTATCTTTGGTTTTAGTGTAGAGAAAGATAATCGTAGAGCAGGAGATGAAAGTGTGGATGTTGAAGACAACGAG   GAAGACAACTGAGATGATGGTGACGACACGGTGGGAGATGAAGAAGAAAAAGAAGACGCAACCGGCTCCGCCCCTGACAGAGATAAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD161873             [                                                                                                                                                                                                                                                                                                                                                                                   ACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTTCTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGGGTGGAAGAACAATCATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGTAGATTTATGAGTCTTAGGCGGACGTCCACGCGATTTCTTAGAAAAACCAGAATATGTTGAAAAGGCCGAAAAAGCTGAGGAATCAGGAGGGGTATGGCCACCAGAAGAGGCAAGGGCAGGGACAGTTGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCGNTGTTTTCACTTCTAAAA GCAACGGTTTTATGCGTATAGTTCCGTGGGTTTTAACCGCGAAAGACGCTGTTGAAAGCTCGGATGAACTGGAATCACAGCTAGGAGGAACAGCTGACATACCGTTGGAGAAACTANGTCTTGGATGGTGTTCCG TGCATCCCTTTTCTTTGGGGGGATTTTCTT T TTGGTGGAAT AGGTAAAAGAAGGT TA AATAGTTTCATAGACGATTAATTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD161895             [                                                                                                                                                                                                                                                                                                                                                                                   ACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTTCTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGGGTGGAAGAACAATCATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGTAGATTTATGAGTCTTAGGCGGACGTCCACGCGATTTCTTAGAAAAACCAGAATATGTTGAAAAGGCCGAAAAAGCTGAGGAATCAGGAGGGGTATGGCCACCAGAAGAGGCAAGGGCAGGGACAGTTGTACGGTCCGATGGAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD161878             [                                                                                                                                                                                                                                                                                                                                                                                   ACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTTCTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGGGTGGAAGAACAATCATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGTAGATTTATGAGTCTTAGGCGGACGTCCACGCGATTTCTTAGAAAAACCAGAATATGTTGAAAAGGCCGAAAAAGCTGAGGAATCAGGAGGGGTATGGCCACCAGAAGAGGCAAGGGCAGGGACAGTTGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCGTTGTTTTCACTTCTAAAAGGCAACGGTTTTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD149305             [                                                                                                                                                                                                                                                                                                                                                                                    CGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATCTGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAACGGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTTCTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGGGTGGAAGAACAATCATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGTAGATTTATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD129887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGATTTATGAGTCTTAGGCGGACGTCCACGCGATTTCTTAGAAAAACCAGAATATGTTGAAGAGGCCGAAAAAGCTGAGGAATCAGGAGGGGTATGGCCACCAGAAGAGGCAAGGGCAGGGACAGTTGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCATTGTTTTCACTTCTAAAAGGCAACGGTTTTATGCGTATAGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAACTGGAATCACAGCTAGGAGGGACAGCTGACATACCGTTGGAGAAACTAGGTCTTGAAT GTGTTTCGTTGCATCGC TTTCTTTTGTGTGATTTTCTT T TTGTTGGAGT AGGTAGAAG AGGTATA GATAGTTTCATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGAAATGCAGCACTTGGTTTCCGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTT AAGTTAT CTTC AG TAACATTCTTCATAGTATCTGGCCAATGTGAGTC                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD147588             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCAAGGGCAGGGACAGTTGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGCCGTTGTTTTCACTTCTAAAAGGCAACGGTTTTATGCGTATAGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAACTGGAATCACAGCTAGGAGGGACAGCTGACATACCGTTGGAGAAACTAGGTCTTGAAT GTGTTTCGTTGCATCGC TTTCTTTTGTGTGATTTTCTT T TTGTTGGAGT ACGTAGAAG AGGTATA GATAGTTTCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD147490             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCAAGGGCAGGGACAGTTGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD147370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGATGAAGGACCAGGTGCACCAGAGGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCATTGTTTTCACTTCTAAAAGGCAACGGTTTTATGCGTATAGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGACCTGGAATCACAGCTAGGAGGGACAGCTGACACACCGTTGGAGAAACTAGCTCTTGAAT GTGCTTCGTTGCATCGC TTTCTCATGTGTGACTTTCTTCTATTGCTGGAGTCAGGTAGAAG AGGTATACGATAGTTTCATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGTAATGCAGCACTTGGTTTCCGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTTCAAGTGATCCTTCTAGATAACATTCTTAAT                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD069678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGAGAAACTAGGTCTTGAAT GTGTTTCGTTGCATCGC TTTCTTTTGTGTGATTTTCTT T TTGTTGGAGT AGGTAGAAG AGGTATA GATAGTTTCATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGGAATGCAGCACTTGGTTTCCGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTT AAGTTAT CTTC AG TAACATTCTTCATAGTATCTGGCCAATGTGAGTCACGTCGAGACGTAGAATGCTGTGACACAGGACACCAAACAGGTGAATTTGTTCCAGTGGATTTACGAGATTTGAATACCTGCATTTCAGGCGATACGTTGAAGCCTTCATTGTGAGATCTAGTAGATAGTGGATGCCTGCCAGGTCTTTTCTTTTTTAAAGAGGGAGAAATAGCATTTTTCA                                                                                                                                         ]
[+] EMBL CD149293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gGAAACTAGGTCTTGAAT GTGTTTCATTGCATCGC TTTCTTTTGTGTGATTTTCTT T TTGTTGGAGT AGGTAGAAG AGGTATA GATAGTTTCATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGAAATGCAGCACTTGGTTTCCGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTT AAGTTAT CTTC AG TAACATTCTTCATAGTATCTGGCCAATGTGAGTCACGTCGAGACGTAGAATGCTGTGACACAGGACACCAAACAGGTGAATTTGTTCCAGTGGATTTACGAGATTT                                                                                                                                                                                                                                                       ]
[-] EMBL CD069692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAG AGGTATA GATAGTTTCATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGAAATGCAGCACTTGGTTTCCGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTT AAGTTAT CTTC AG TAACATTCTTCATAGTATCTGGCCAATGTGAGTCACGTCGAGACGTAGAATGCTGTGACACAGGACACCAAACAGGTGAATTTGTTCCAGTGGATTTACGAGATTTGAATACCTGCATTTCAGGCGATACGTTGAAGCCTTCATTGTGAGATCTAGTAGATAGTGGATGCCTGCCAGGTCTTTTCTTTTTTAAAGAGGGAGAAATAGCATTTTTCAGGAATGTTCCATTAGATATAGACTCATTGATTAGATTATTTCTTATCGAATCTATCGAGATAGGTTCAGTCAGCATCTTGTTTGGCGAATGATCAGAGTAATTCTTCATTTGCCTATCAAAAATAGCTTGGTTTGTT]




>consensus_10518#0
CGACGTCTTCATCTTGGTAGTCATTATTCAAATCTGTATTTTTGAAAGTAGTTATAACAG
TAGGTCGCGAGACGGTCGGGAATGTCCCTTCGTTTCCAAGTTATGGCGAGACGACTTATT
TGGTTTAGTTAACTTGGGAACGTGTTGACTACTATCAGCTCCTTTTGTCCCTCCCTTATT
ATCGCGTGTTTTGAGAGTTAACTGACTTTGGAAGGGTGTTAATATGTCTTTTGACGACTT
TTGCTTGACTCGAGCGGTCGACAGTTCGTCATTTATCTTTGGTTTTAGTGTAGAGAAAGA
TAATCGTAGAGCAGGAGATGAAAGTGTGGATGTTGAAGACAACGAGGAAGACAACTGAGA
TGATGGTGACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATC
TGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAAC
GGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTT
CTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGGGTGGAAGAACAATC
ATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGTAGATTT
ATGAGTCTTAGGCGGACGTCCACGCGATTTCTTAGAAAAACCAGAATATGTTGAAAAGGC
CGAAAAAGCTGAGGAATCAGGAGGGGTATGGCCACCAGAAGAGGCAAGGGCAGGGACAGT
TGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGG
TTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTC
CTTCACAGAAAGAGGAATGTCGTTGTTTTCACTTCTAAAAGGCAACGGTTTTATGCGTAT
AGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAACTGGAATCACA
GCTAGGAGGGACAGCTGACATACCGTTGGAGAAACTAGGTCTTGAATGTGTTTCGTTGCA
TCGCTTTCTTTTGTGTGATTTTCTTTTTGTTGGAGTAGGTAGAAGAGGTATAGATAGTTT
CATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGAAATGCAGCACTTGGTTTC
CGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTTAAGTTATCTTCAGTAACATT
CTTCATAGTATCTGGCCAATGTGAGTCACGTCGAGACGTAGAATGCTGTGACACAGGACA
CCAAACAGGTGAATTTGTTCCAGTGGATTTACGAGATTTGAATACCTGCATTTCAGGCGA
TACGTTGAAGCCTTCATTGTGAGATCTAGTAGATAGTGGATGCCTGCCAGGTCTTTTCTT
TTTTAAAGAGGGAGAAATAGCATTTTTCAGGAATGTTCCATTAGATATAGACTCATTGAT
TAGATTATTTCTTATCGAATCTATCGAGATAGGTTCAGTCAGCATCTTGTTTGGCGAATG
ATCAGAGTAATTCTTCATTTGCCTATCAAAAATAGCTTGGTTTGTT

consensusID : consensus_10518#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 260
fasta sequence

                              [GACCATTCATTCTAAATTATGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCATTGTTTTCACTTCTAAAAGGCAACGCTTTTATGCGTATAGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAAGCTGGAATCACAGCTAGGAGGACAGCTGACATACCGTTGGAGACA]

[-] EMBL CD064230             [GACCATTCATTCTAAATTATGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCATTGTTTTCACTTCTAAAAGGCAACGCTTTTATGCGTATAGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAAGCTGGAATCACAGCTAGGAGGACAGCTGACATACCGTTGGAGACA]
[-] EMBL CD090761             [                              ACATACTGTGTACAGGTTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAGGAATGTCATTGTTTTCACTTCTAAAAGGCAACGGTTTTATGCGTATAGTTCG                                                                                        ]




>consensus_10518#1
GACCATTCATTCTAAATTATGATGAGGACGACATACTGTGTACAGGTTCTGTACGCACGA
CATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTCCTTCACAGAAAGAG
GAATGTCATTGTTTTCACTTCTAAAAGGCAACGCTTTTATGCGTATAGTTCGTTGTGTTT
TAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAAGCTGGAATCACAGCTAGGAGGACAG
CTGACATACCGTTGGAGACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10518#0      CGACGTCTTCATCTTGGTAGTCATTATTCAAATCTGTATTTTTGAAAGTAGTTATAACAG 60
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TAGGTCGCGAGACGGTCGGGAATGTCCCTTCGTTTCCAAGTTATGGCGAGACGACTTATT 120
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TGGTTTAGTTAACTTGGGAACGTGTTGACTACTATCAGCTCCTTTTGTCCCTCCCTTATT 180
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      ATCGCGTGTTTTGAGAGTTAACTGACTTTGGAAGGGTGTTAATATGTCTTTTGACGACTT 240
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TTGCTTGACTCGAGCGGTCGACAGTTCGTCATTTATCTTTGGTTTTAGTGTAGAGAAAGA 300
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TAATCGTAGAGCAGGAGATGAAAGTGTGGATGTTGAAGACAACGAGGAAGACAACTGAGA 360
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TGATGGTGACGACACGGTGGAAGATGAAGAAGAAAGAGAAGACAAATCCGACTCCGCATC 420
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TGACAGAGATGAAGGTGGGGATAAAGAACACACTGGGTGTTGTTTATCTTCATCTGCAAC 480
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      GGTTAGTCTATCCGAACGGATAGGAGAACTTATCGGCACTGTAAGAAGACTATGTTTGTT 540
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      CTTAGCTGGGGGCTCATAGGTATTTCTTGCAGATAACAGTAACGGGGTGGAAGAACAATC 600
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      ATCAGAATTTTCGGTGGCAGATTTGGCACTCGCTGAAGGCAAAGAGGACTTGGTAGATTT 660
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      ATGAGTCTTAGGCGGACGTCCACGCGATTTCTTAGAAAAACCAGAATATGTTGAAAAGGC 720
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      CGAAAAAGCTGAGGAATCAGGAGGGGTATGGCCACCAGAAGAGGCAAGGGCAGGGACAGT 780
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TGTACGGTCCGATGAAGGACCAGATGCAGCAGAGGATGAGGACGACATACTGTGTACAGG 840
consensus_10518#1      --------------GACCATTCATTCTAAATTATGATGAGGACGACATACTGTGTACAGG 46
                                      *  *     *  *    * **************************

consensus_10518#0      TTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTC 900
consensus_10518#1      TTCTGTACGCACGACATGACTGTCAACACAGGTCAATCGAGGGAGAGACTGATTGCCTTC 106
                       ************************************************************

consensus_10518#0      CTTCACAGAAAGAGGAATGTCGTTGTTTTCACTTCTAAAAGGCAACGGTTTTATGCGTAT 960
consensus_10518#1      CTTCACAGAAAGAGGAATGTCATTGTTTTCACTTCTAAAAGGCAACGCTTTTATGCGTAT 166
                       ********************* ************************* ************

consensus_10518#0      AGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAA-CTGGAATCAC 1019
consensus_10518#1      AGTTCGTTGTGTTTTAGCCGCGAAAGACGCTGTTGAAAGCTCGGATGAAGCTGGAATCAC 226
                       ************************************************* **********

consensus_10518#0      AGCTAGGAGGGACAGCTGACATACCGTTGGAGAAACTAGGTCTTGAATGTGTTTCGTTGC 1079
consensus_10518#1      AGCTAGGAGG-ACAGCTGACATACCGTTGGAGACA------------------------- 260
                       ********** ********************** *                         

consensus_10518#0      ATCGCTTTCTTTTGTGTGATTTTCTTTTTGTTGGAGTAGGTAGAAGAGGTATAGATAGTT 1139
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TCATAGACGATTTATTTACACTTGGATTCTCAGTAGACTCTGAAATGCAGCACTTGGTTT 1199
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      CCGGACCATCACTGTCACTGTTCAATGACGATAAGGAAGTTAAGTTATCTTCAGTAACAT 1259
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TCTTCATAGTATCTGGCCAATGTGAGTCACGTCGAGACGTAGAATGCTGTGACACAGGAC 1319
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      ACCAAACAGGTGAATTTGTTCCAGTGGATTTACGAGATTTGAATACCTGCATTTCAGGCG 1379
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      ATACGTTGAAGCCTTCATTGTGAGATCTAGTAGATAGTGGATGCCTGCCAGGTCTTTTCT 1439
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TTTTTAAAGAGGGAGAAATAGCATTTTTCAGGAATGTTCCATTAGATATAGACTCATTGA 1499
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      TTAGATTATTTCTTATCGAATCTATCGAGATAGGTTCAGTCAGCATCTTGTTTGGCGAAT 1559
consensus_10518#1      ------------------------------------------------------------
                                                                                   

consensus_10518#0      GATCAGAGTAATTCTTCATTTGCCTATCAAAAATAGCTTGGTTTGTT 1606
consensus_10518#1      -----------------------------------------------