cluster # 10523

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Schistosoma mansoni
cluster # 10523 cluster # 10523 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10523#0 length = 1094 sequences # 8

consensus_10523#1 length = 741 sequences # 8
consensus_10523#2 length = 397 sequences # 1

consensusID : consensus_10523#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1094
fasta sequence

                              [TCGGTCACCCTGGNNCAAGGTGGNAAATCAGGAAAGATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAA-GATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACTGAAAGCACCTATGCGCGGG-TCTCTGCTGACCAAAGCTTCATGGAATAAGTGGTGATTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCACAATCAAGACTAGGCATATTGTGTATACAACTCGTTTGCAAGGGTCGTGCTTTGAATCTACAAACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGA-TTCC-ACAAGGGGCATAAAAATAGCAAATAGAAGACCGACAACAAGGCATATGCCATATCCCAAGTATGTTGTTACAACAGGCTCAACGCTTCTATATGCGAGTCTTGAGTGGTGTGAAGTTTGAATATTGACAAGGGTTTCAAAAACAGCTGTAGGTGGTTTCTTACCACGAATAAGATCCAAAAAGAAATTCGATATCGAGTAAGAAAACTCCACACTATCACGCAGTTGTAGGGTAGTTCTTGTAGATGAGTCATCATCCACCTCTGAGTTGCATACGGCAATATCAAGGCTTACACACAAAAATAATACTGTGCTAAAAACGACTCTCATCATTGATACTAAGGAATCAGGTCAAGGACTTGAGCATTGCTAGAACAC]

[+] EMBL CD168218             [TCGGTCACCCTGGNNCAAGGTGGNAAATCAGGAAAGATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAA GATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACTGAAAGCACCTATGCGCGGG TCTCTGCTGACCAAAGCTTCATGGAATAAGTGGTGATTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCACAATCAAGACTAGGCATATTGTGTATACAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD129289             [                                        CGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAA GATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACTGAAAGCACCTATGCGCGGG TCTCTGCTGACCAAAGCTTCATGGAATAAGTGGTGATTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCACAATCAAGACTAGGCATATTGTGTATACAACTCGTTTGCAAGGGTCGTGCTTTGAATCTACAAACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGA TTCC ACAAG                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD129431             [                                           TGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTAACAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAA GATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACTGAAAGCACCTATGCGCGGG TCTCTGCTGACCAAAGCTTCATGGAATAAGTGGTGATTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCACAATCAAGACTAGGCATATTGTGTATACAACTCGTTTGCAAGGGTCGTGCTTTGAATCTACAAACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGA TTCC Aaac                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD152832             [                                                                                                                                                                                                                                     TGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCATATCCACGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAAGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAACGATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAATGCTAAAGTTAGCTTGACTGAAAGCACCTATGCGCCGG TCTCTGCTGACCAAAGCTTTATGGAATAAGTGGTGATTGATGAAAGCCAAAA AACAGCCGCCAATTGATACGTCACAATC AGACTAGGCCTATTGTGT TACAACTCGTTTGC AGGGTCGTGC TTGAATCTACAAACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCATAAGAAAACGATTTCC ACAAGGTGCATAAAAATATCCAATATAAGACCGACAAC                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD090187             [                                                                                                                                                                                                                                                                                                                                                                                                       CGCATGAAGCGTTCTTTTTGTTTACTAA GATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCCCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACTGAAAGCACCTATGCGCGGG TCTCTGCTGACCAAAGCTTCATGGAATAAGTGGTGATTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCACAATCAAGACTAGGCATATTGTGTATACAACTCGTTTGCAAGGGTCGTGCTTTGAATCTACAAACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGA TTCCAACAAGGGGCATAAAAATAGCAAATAGAAGACCGACAACAAGGCATATGCCATATCCCAAGT                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BG931281             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGGGATCTCTGCTGACCAGAGCGTCGTGGAATCAGTGGTGACTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCACAATCAAGACTAGGCATATTGTGTATACAACTCGTATGCAAGGGTCGTGCTTTGAATCTACAAACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGA TTCCAACAAGGGGCATAAAAATAGCAAATAGAAGACCGAAAACAAGGCATATGCCATATCCCAAGTATGTTGTTACAACAGGCTCAACGCTTCTATATGCGACTCTTGAGTGGTGTGAAGTCTGAATATTGACGAGGGTTACAAAAACAGCTGTAGG                                                                                                                                                                                                                                 ]
[-] EMBL CD110881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TATACAACTCGTTTGCAAGGTTCGTGCTTTGAATCTACAAACTGTACACGCCCGCCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGA TTCCAACAAGGGGCATAAAAATAGCAAATAGAAGACCGACAACAAGGCATATGCCATATCCCAAGTATGTTGTTACAACAGGCTCAACGCTTCTATATGCGAGTCTTGAGTGGTGTGAAGTTTGAATATTGACAAGGGTTTCAAAAACAGCTGTAGGTGGTTTCTTACCACGAATAAGATCCAAAAAGAAATTCGATATCGAGTAAGAAAACTCCACACTATCACGCAGTTGTAGGGTAGTTCTTGTAGATGAGTCATCATCCACCTCTGAGTTGCATACGGCAATATCAAGGCTTACACACAAAAATAATACTGTGCTAAAAACGACTCTCATCATTGATACTAAGGAATCAGGTCAAGGACTTGAGCATTGCTAGAACAC]
[-] EMBL CD192370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCGACAACAAGGCATATGCCATATCCCAAGTATGTTGTTACAACAGGCTCAACGCTTCTATATGCGAGTCTTGAGTGGTGTGAAGTTTGAATATTGTCAAGGGTTTCAAAAACAGCTGTAGGTGGTTTCTTACCACGAATAAGATCCAAAAAGAAATTCGATATCGAGCAAGAAAACTCCACACTATCACGC                                                                                                                                                           ]




>consensus_10523#0
TCGGTCACCCTGGNNCAAGGTGGNAAATCAGGAAAGATGCCGTTGAATTTGGTTAGAAAT
AGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTT
GGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAA
TGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATG
GTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGT
TTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTC
TTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAG
ATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTC
AATAAGGCTAAGGTTAGCTTGACTGAAAGCACCTATGCGCGGGTCTCTGCTGACCAAAGC
TTCATGGAATAAGTGGTGATTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCAC
AATCAAGACTAGGCATATTGTGTATACAACTCGTTTGCAAGGGTCGTGCTTTGAATCTAC
AAACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGATTCCACA
AGGGGCATAAAAATAGCAAATAGAAGACCGACAACAAGGCATATGCCATATCCCAAGTAT
GTTGTTACAACAGGCTCAACGCTTCTATATGCGAGTCTTGAGTGGTGTGAAGTTTGAATA
TTGACAAGGGTTTCAAAAACAGCTGTAGGTGGTTTCTTACCACGAATAAGATCCAAAAAG
AAATTCGATATCGAGTAAGAAAACTCCACACTATCACGCAGTTGTAGGGTAGTTCTTGTA
GATGAGTCATCATCCACCTCTGAGTTGCATACGGCAATATCAAGGCTTACACACAAAAAT
AATACTGTGCTAAAAACGACTCTCATCATTGATACTAAGGAATCAGGTCAAGGACTTGAG
CATTGCTAGAACAC

consensusID : consensus_10523#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 741
fasta sequence

                              [GCCACCATATAACACATATTCGACAGCTCGTAAATAATGATCATTTATTTCTTCATTAATCTCCAATGAAATTCGATCACGAATAAATTTTAAAGTGGTGCTTACATTAACCATAATATGTTCGAATACACTAGCTAGTTTCTCTCGTGTCTTTGGAGACTGAGCTAAATCGTTCCAGGCACGATCCAGATCATCACTAATGGAACGTTTCACATNTACGG-CTAGATTATTGATAGTTTTATTAAATTCATTGAGATAGTCAACATCAGGAAGATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACT]

[+] EMBL CD151655             [GCCACCATATAACACATATTCGACAGCTCGTAAATAATGATCATTTATTTCTTCATTAATCTCCAATGAAATTCGATCACGAATAAATTTTAAAGTGGTGCTTACATTAACCATAATATGTTCGAATACACTAGCTAGTTTCTCTCGTGTCTTTGGAGACTGAGCTAAATCGTTCCAGGCACGATCCAGATCATCACTAATGGAACGTTTCACATTTACGG CTAGATTATTGATAGTTTTATTAAATTCATTGAGATAGTCAACATCAGGAAGATGCCGTTGAATTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD121259             [                                                                                                                                                                                                           AACGTTTCACATNTACGG CTAGATTATTGATAGTTNTATTAAATTCATTGAGATAGTCAACATCAGGAAGATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACT]
[-] EMBL CD121269             [                                                                                                                                                                                                           AACGTTTCACATNTACGG CTAGATTATTGATAGTTNTATTAAATTCATTGAGATAGTCAACATCAGGAAGATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACT]
[-] EMBL CD121153             [                                                                                                                                                                                                           AACGTTTCACATNTACGG CTAGATTATTGATAGTTTTATTAAATTCATTGAGATAGTCAACATCAGGAAGATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAGGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACT]
[-] EMBL CD121214             [                                                                                                                                                                                                           AACGTTTCACAT TACGGNCTAGATTATTGATAGTTTTATTAAATTCATTGAGATAGTCAACATCAGGAAGATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGATCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAATAAGGCTAAGGTTAGCTTGACT]
[-] EMBL CD161663             [                                                                                                                                                                                                                                                                                 GATGCCGTTGAATTTGGTTAGAAATAGAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATT                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD115552             [                                                                                                                                                                                                                                                                                                                  CTTCTTCTATTTGGAACACATTGGGTGGAACACGAACTTTTAACTGATCGTTGGCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTCTTCAATGTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCCTCAGATACATTATTCGCTTGAGATAGTTTACTAAAATCTTCTTTAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTCTGTTTACTAAGAT                                                                                  ]
[+] EMBL CD152824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAAGTGAATGGTTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTACTAAAATCTTCTTCATAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGATCTGTTGAAGAAGTATTCTTTGCCAT                                                         ]




>consensus_10523#1
GCCACCATATAACACATATTCGACAGCTCGTAAATAATGATCATTTATTTCTTCATTAAT
CTCCAATGAAATTCGATCACGAATAAATTTTAAAGTGGTGCTTACATTAACCATAATATG
TTCGAATACACTAGCTAGTTTCTCTCGTGTCTTTGGAGACTGAGCTAAATCGTTCCAGGC
ACGATCCAGATCATCACTAATGGAACGTTTCACATNTACGGCTAGATTATTGATAGTTTT
ATTAAATTCATTGAGATAGTCAACATCAGGAAGATGCCGTTGAATTTGGTTAGAAATAGA
AATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTGGC
CAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAATGT
ATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGGTT
AAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTTTG
AAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCTTC
AAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGATC
TGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCAAT
AAGGCTAAGGTTAGCTTGACT

consensusID : consensus_10523#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence

                              [TGATTGAGAACTTACGATCCAGATCATCACTAATGGAACGTTTCACATTTACGGCTAGATTATTGATAGTTTTATTAAACTAGATAACATTGAAACAAATCAAGAAAAAAGAAATTATTAACTAAAAGAAAACCACTGAATTATAAAGCATAGATTATAATGAAGATGTCAAAAGGATTCATGATAGTCAAACCATAAAACATACTGCAAAATCAGATCAAGTTGATAAATTTCCCGAGAAAATGATAGTTTTAATATAATTTAGATACACTAGTTTCTTCAGAAAGAATGATACAATAAAGTGTTTGAGCAGTTGTGAAAATATTGAAGCCCTTGAATTTCAGCTACTCAGTTCAAACCCTGCTGGACTAAAATATCTAAACAATAGTATCACCAA]

[+] EMBL CD160169             [TGATTGAGAACTTACGATCCAGATCATCACTAATGGAACGTTTCACATTTACGGCTAGATTATTGATAGTTTTATTAAACTAGATAACATTGAAACAAATCAAGAAAAAAGAAATTATTAACTAAAAGAAAACCACTGAATTATAAAGCATAGATTATAATGAAGATGTCAAAAGGATTCATGATAGTCAAACCATAAAACATACTGCAAAATCAGATCAAGTTGATAAATTTCCCGAGAAAATGATAGTTTTAATATAATTTAGATACACTAGTTTCTTCAGAAAGAATGATACAATAAAGTGTTTGAGCAGTTGTGAAAATATTGAAGCCCTTGAATTTCAGCTACTCAGTTCAAACCCTGCTGGACTAAAATATCTAAACAATAGTATCACCAA]




>consensus_10523#2
TGATTGAGAACTTACGATCCAGATCATCACTAATGGAACGTTTCACATTTACGGCTAGAT
TATTGATAGTTTTATTAAACTAGATAACATTGAAACAAATCAAGAAAAAAGAAATTATTA
ACTAAAAGAAAACCACTGAATTATAAAGCATAGATTATAATGAAGATGTCAAAAGGATTC
ATGATAGTCAAACCATAAAACATACTGCAAAATCAGATCAAGTTGATAAATTTCCCGAGA
AAATGATAGTTTTAATATAATTTAGATACACTAGTTTCTTCAGAAAGAATGATACAATAA
AGTGTTTGAGCAGTTGTGAAAATATTGAAGCCCTTGAATTTCAGCTACTCAGTTCAAACC
CTGCTGGACTAAAATATCTAAACAATAGTATCACCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10523#0      ------------------------------------------------------------
consensus_10523#1      GCCACCATATAACACATATTCGACAGCTCGTAAATAATGATCATTTATTTCTTCATTAAT 60
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      ------------------------------------------------------------
consensus_10523#1      CTCCAATGAAATTCGATCACGAATAAATTTTAAAGTGGTGCTTACATTAACCATAATATG 120
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      ------------------------------------------------------------
consensus_10523#1      TTCGAATACACTAGCTAGTTTCTCTCGTGTCTTTGGAGACTGAGCTAAATCGTTCCAGGC 180
consensus_10523#2      ----------------------------------------------TGATTGAGA-ACTT 13
                                                                                   

consensus_10523#0      ---------------------------------------------------------TCG 3
consensus_10523#1      ACGATCCAGATCATCACTAATGGAACGTTTCACATNTACGGCTAGATTATTGATAGTTTT 240
consensus_10523#2      ACGATCCAGATCATCACTAATGGAACGTTTCACATTTACGGCTAGATTATTGATAGTTTT 73
                                                                                *  

consensus_10523#0      GTCACCCTGGNNCAAGGTGG--NAAATCAGGAAAGATGCCGTTGAATTTGGTTAGAAATA 61
consensus_10523#1      ATTAAATTCATTGAGATAGT--CAACATCAGGAAGATGCCGTTGAATTTGGTTAGAAATA 298
consensus_10523#2      ATTAAACTAGATAACATTGAAACAAATCAAGAAAAAAGAAATTA---TTAACTAAAA--G 128
                        * *   *     *    *    **     * ** * *   **    **   ** **   

consensus_10523#0      GAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTG 121
consensus_10523#1      GAAATCACTTCTTCTATTTGGAACACATTTGGTGGAACACGAACTTTTAACTGATCGTTG 358
consensus_10523#2      AAAACCACTG-----AATTATAAAGCATAGATTATAATGAAGATGTCAAAAGGATTCATG 183
                        *** ****      * **  **  ***    *  **     *  *  **  ***   **

consensus_10523#0      GCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAAT 181
consensus_10523#1      GCCAGTTCCATCAATTCCCGGCATTCAATGATTTTATCAATGGGACAACCTGTATTCAAT 418
consensus_10523#2      ATAG--TCAAACCATAAAACATACTGCAAAATCAGATCAAGTTGATAAATTT--CCCGAG 239
                             ** * * **       * *  *  **   *****   ** **  *     * * 

consensus_10523#0      GTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGG 241
consensus_10523#1      GTATCAGTTAAACGCTGACGAATGGTAGGTAGTTCAGAGATCACTTCGTGAAGTGAATGG 478
consensus_10523#2      AAAATGAT--AGTTTTAATATAATTTAGATA---CACTAGTTTCTTCAGAAAG--AATGA 292
                         *    *  *    * *   *   *** **   **    *  ****   ***  **** 

consensus_10523#0      TTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTT 301
consensus_10523#1      TTAAAGTAACTTATTTGTGCGATTGCCTCAGATCCAGGAAGGAAAGCTCGTGCAGATGTT 538
consensus_10523#2      T-ACAATAAAGTGTTTGAGCAGTTGT--------------GAAAATATTG---AAGCCCT 334
                       * * * ***  * **** **  ***               * ***  * *   *     *

consensus_10523#0      TGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCT 361
consensus_10523#1      TGAAATCCTGAAATTGCATCAGATACATTATTCGCTTGAGATAGTTTAGTAAAATCTTCT 598
consensus_10523#2      TGAATTTCAGCTACT-CAGTTCAAACCCTGCTGGACTAAAATATCTAAACAATAGTATCA 393
                       **** * * *  * * **    * **  *  * *  * * ***  * *  ** *   ** 

consensus_10523#0      TCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGA 421
consensus_10523#1      TCAAAGCTCACAAGGCCATCATCTATAATTCGCATGAAGCGTTCTTTTTGTTTACTAAGA 658
consensus_10523#2      CCAA-------------------------------------------------------- 397
                        ***                                                        

consensus_10523#0      TCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCA 481
consensus_10523#1      TCTGTTGAAGAAGTATTCTTTGCCATCTGTACCATATCTTTTAGAGCCTCTTCAAACTCA 718
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      ATAAGGCTAAGGTTAGCTTGACTGAAAGCACCTATGCGCGGGTCTCTGCTGACCAAAGCT 541
consensus_10523#1      ATAAGGCTAAGGTTAGCTTGACT------------------------------------- 741
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      TCATGGAATAAGTGGTGATTGATGAAAGCCAAAACAACAGCAGCCAATTGAAACGTCACA 601
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      ATCAAGACTAGGCATATTGTGTATACAACTCGTTTGCAAGGGTCGTGCTTTGAATCTACA 661
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      AACTGTACACGCCCACCACATTTTCCACAGCACCGAGCGCAGAAGAAAACGATTCCACAA 721
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      GGGGCATAAAAATAGCAAATAGAAGACCGACAACAAGGCATATGCCATATCCCAAGTATG 781
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      TTGTTACAACAGGCTCAACGCTTCTATATGCGAGTCTTGAGTGGTGTGAAGTTTGAATAT 841
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      TGACAAGGGTTTCAAAAACAGCTGTAGGTGGTTTCTTACCACGAATAAGATCCAAAAAGA 901
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      AATTCGATATCGAGTAAGAAAACTCCACACTATCACGCAGTTGTAGGGTAGTTCTTGTAG 961
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      ATGAGTCATCATCCACCTCTGAGTTGCATACGGCAATATCAAGGCTTACACACAAAAATA 1021
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      ATACTGTGCTAAAAACGACTCTCATCATTGATACTAAGGAATCAGGTCAAGGACTTGAGC 1081
consensus_10523#1      ------------------------------------------------------------
consensus_10523#2      ------------------------------------------------------------
                                                                                   

consensus_10523#0      ATTGCTAGAACAC 1094
consensus_10523#1      -------------
consensus_10523#2      -------------