cluster # 10534

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Schistosoma mansoni
cluster # 10534 cluster # 10534 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10534#0 length = 1211 sequences # 4
consensus_10534#1 length = 857 sequences # 11

consensus_10534#2 length = 303 sequences # 1
consensus_10534#3 length = 152 sequences # 1

consensusID : consensus_10534#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1211
fasta sequence

                              [CTCGCAGGCCANAATTCGGCACGAGGAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAGATATAGGTTTCGAAGTGGAAATGCGACAAATTATAAAACTTCTCCCGACGGTGCGGCAAACAATGCTGTTTTCTGCTACCTTGAACGAAAAGACGAAAAACCTAGCCAACGCTGCTCTAAAAGCTTCTTGTGTTATGGTCGGATCAGCTCCCGATACTGAAGCAACTGTTGAGGGATTGGAACAAGGGTATGTCGTCTGCCCTCCTGACAGGCGTTTTTGTCTACTGTATACATTTCTCAAGAAAAATAAAAGTAAAAAGATTATGGTTTTCATGGCTTCGTGTATGGAAGTTAAGTTTTACTACGAGTTGCTGAACTTTGTGGATACTCCAGTCCTAGCCATCCATGGACGACAAAAACAAGCTAAAAGGACAAGCACCTTTCTTCAGTTTGTAAAAGCTGAATCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGATTTTACAATATGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGACCTCATGAATTGGAGTTCCTGTCAATTTTACGAAAAGCTCGCGTTAAGGTTGTGGAGTATGAAATAGCCAATTCAAAGATGGCGGATGTGCAACCTGCTTTGGAGAAGTTGATCAAAAACAACTATTTCCTTGCTCTTTCCGCTCAGGAAGCCTTCAAAGGTATAGTTCGTGCTTACGCTTCGTCTGGCCTAAGCTGTTTTAATGTAGATGAACTAGACTTGGCCGCAACAGCAAAAACATGTGGACTAACAATTACTCCCAAGGTGGATTTGAATGTAAAATCAAAGAGAACACGAGAAAATCCTGGCCAAAAGCGTTATAAACCTTTTGGTGTATCTGATAAAAAAGCCAAGAAAGCTAAAATTTATAAACGAATATCTTAATTATATGTAATTCTTCACGCTCTATGTATATATCACAAACATTTTCTGTTATAAATAATATACAACTCAAGTAAATGAAAACAATGAGAAATATATAAAT]

[+] EMBL CD079396             [CTCGCAGGCCANAATTCGGCACGAGGAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAGATATAGGTTTCGAAGTGGAAATGCGACAAATTATAAAACTTCTCCCGACGGTGCGGCAAACAATGCTGTTTTCTGCTACCTTGAACGAAAAGACGAAAAACCTAGCCAACGCTGCTCTAAAAGCTTCTTGTGTTATGGTCGGATCAGCTCCCGATACTGAAGCAACTGTTGAGGGATTGGAACAAGGGTATGTCGTCTGCCCTCCTGACAGGCGTTTTTGTCTACTGTATACATTTCTCAAGAAAAATAAAAGTAAAAAGATTATGGTTTTCATGGCTTCGTGTATGGAAGTTAAGTTTTACTACGAGTTGCTGAACTTTGTGGATACTCCAGTCCTAGCCATCCATGGACGACAAAAACAAGCTAAAAGGACAAGCACCTTTCTTCAGTTTGTAAAAGCTGAATCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGATTNTACAATATGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGNTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD180301             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ACAAGCTAAAAGGACAAGCACCTTTCTTCAG TTGTAAAAGCTGAATCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGATTTTACAATATGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGACCTCATGAATTGGAGTTCCTGTCAATTTTACGAAAAGCTCGCGTTAAGGTTGTGGAGTATGAAATAGCCAATTCAAAGATGGCGGATGTGCAACCTGCTTTGGAGAAGTTGATCAAAAACAACTATTTCCTTGCTCTTTCCGCTCAGGAAGCCTTCAAAGGTATAGTTCG                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD073671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGATTTTACAATATGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGACCTCATGAATTGGAGTTCCTGTCAATTTTACGAAAAGCTCGCGTTAAGGTTGTGGAGTATGAAATAGCCAATTCAAAGATGGCGGATGTGCAACCTGCTTTGGAGAAGTTGATCAAAAACAACTATTTCCTTGCTCTTTCCGCTCAGGAAGCCTTCAAAGGTATAGTTCGTGCTTACGCTTCGTCTGGCCTAAGCTGTTTTAATGTAGATGAACTAGACTTGGCCGCAACAGCAAAAACATGTGGACTAACAATTACTCCCAAGGTGGATTTGAATGTAAAATCAAAGAGAACACGAGAAAATCCTGGCCAAAAGCGTTATAAACCTTTTGGTGTATCTGATAAAAAAGCCAAGAAAGCTAAAATTTATAAACGAATATCTTAATTATATGTAATTCTTCACGCTCTATGTATATATCACAAACATTTTCTGTTATAAATAATATACAACTC                                ]
[-] EMBL CD075308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGACCTCATGAATTGGAGTTCCTGTCAATTTTACGAAAAGCTCGCGTTAAGGTTGTGGAGTATGAAATAGCCAATTCAAAGATGGCGGATGTGCAACCTGCTTTGGAGAAGTTGATCAAAAACAACTATTTCCTTGCTCTTTCCGCTCAGGAAGCCTTCAAAGGTATAGTTCGTGCTTACGCTTCGTCTGGCCTAAGCTGTTTTAATGTAGATGAACTAGACTTGGCCGCAACAGCAAAAACATGTGGACTAACAATTACTCCCAAGGTGGATTTGAATGTAAAATCAAAGAGAACACGAGAAAATCCTGGCCAAAAGCGTTATAAACCTTTTGGTGTATCTGATAAAAAAGCCAAGAAAGCTAAAATTTATAAACGAATATCTTAATTATATGTAATTCTTCACGCTCTATGTATATATCACAAACATTTTCTGTTATAAATAATATACAACTCAAGTAAATGAAAACAATGAGAAATATATAAAT]




>consensus_10534#0
CTCGCAGGCCANAATTCGGCACGAGGAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGC
AACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCT
TAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAGATATAGGTTTCGAAGTGGAAAT
GCGACAAATTATAAAACTTCTCCCGACGGTGCGGCAAACAATGCTGTTTTCTGCTACCTT
GAACGAAAAGACGAAAAACCTAGCCAACGCTGCTCTAAAAGCTTCTTGTGTTATGGTCGG
ATCAGCTCCCGATACTGAAGCAACTGTTGAGGGATTGGAACAAGGGTATGTCGTCTGCCC
TCCTGACAGGCGTTTTTGTCTACTGTATACATTTCTCAAGAAAAATAAAAGTAAAAAGAT
TATGGTTTTCATGGCTTCGTGTATGGAAGTTAAGTTTTACTACGAGTTGCTGAACTTTGT
GGATACTCCAGTCCTAGCCATCCATGGACGACAAAAACAAGCTAAAAGGACAAGCACCTT
TCTTCAGTTTGTAAAAGCTGAATCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGG
CCTAGACATACCAAAGGTTGATTGGATTTTACAATATGATCCACCTGATGATGCCAAAGA
GTATATACATCGAGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGT
GTTGAGACCTCATGAATTGGAGTTCCTGTCAATTTTACGAAAAGCTCGCGTTAAGGTTGT
GGAGTATGAAATAGCCAATTCAAAGATGGCGGATGTGCAACCTGCTTTGGAGAAGTTGAT
CAAAAACAACTATTTCCTTGCTCTTTCCGCTCAGGAAGCCTTCAAAGGTATAGTTCGTGC
TTACGCTTCGTCTGGCCTAAGCTGTTTTAATGTAGATGAACTAGACTTGGCCGCAACAGC
AAAAACATGTGGACTAACAATTACTCCCAAGGTGGATTTGAATGTAAAATCAAAGAGAAC
ACGAGAAAATCCTGGCCAAAAGCGTTATAAACCTTTTGGTGTATCTGATAAAAAAGCCAA
GAAAGCTAAAATTTATAAACGAATATCTTAATTATATGTAATTCTTCACGCTCTATGTAT
ATATCACAAACATTTTCTGTTATAAATAATATACAACTCAAGTAAATGAAAACAATGAGA
AATATATAAAT

consensusID : consensus_10534#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 857
fasta sequence

                              [TTGGGCGCCAAAGTTGATCCGAGAGACGCATGATGAGGGAGTTTTCACCTACGAAAAAGCTGAGGAAAAGACTCAAGAAAATCCGCGAAAAAAACACTGAAAATCACGTCGAGAGTAAGGATGCCGCGTTGGATAACCTAG-AAGAGTCACAGCCTGGCACGAGTATCTCATTGTCGGG-AAAATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAGATATAGGTTTCGAAGTGGAAATGCGACAAATTATAAAACTTCTCCCGACGGTGCGGCANACAATGCTGTTTTCTGCTACCTTTGACGAAAAGAACGAAAACCTAGCCAACGCTGCTCTAAAAGCTTCTTTGTGTATGGTCGGATCAGCTTCCGATACTGAAGCAACTGTTGAGGGATTGGAAAAAGGTATGTCGTCT]

[-] EMBL CD148029             [TTGGGCGCCAAAGTTGATCCGAGAGACGCATGATGAGGGAGTTTTCACCTACGAAAAAGCTGAGGAAAAGACTCAAGAAAATCCGCGAAAAAAACACTGAAAATCACGTCGAGAGTAAGGATGCCGCGTTGGATAACCTAG AAGAGTCACAGCCTGGCACGAGTACCTCATTGTCGGG AAAATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD111886             [                                   AGGGAGTTTTCACCTACGAAAAAGCTGAGGAAAAGACTCAAGAAAATCCGCGAAAAAAACACTGAAAATCACATCGAGAGTAAGGATGCCGCGTTGGATAACCTAG AAGAGTCACAGCCTGGCACGAGTATCTCATTGTCGGG AAAATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD140657             [                                                                                                                          GCCGCGTTGGATAACCTAG AAGAGTCACAGCCTGGCACGAGTATCTCATTGTCGGGCAAAATTTGAAGATTTACCTATATCATAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGGCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD140475             [                                                                                                                          GCCGCGTTGGATAGCCTAGAAAGAGTCACAGCCTGGCACGAGTATCTCATTGTCGGG AAAATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCG                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD140687             [                                                                                                                          GCCGCGTTGGATAACCTAG AAGAGTCACAGCCTGGCACGAGTATCTCATTGTCGGG AAAATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATCCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCG                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD137621             [                                                                                                                                                                         CATTGTCGGG AAAATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCGTAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAGATATAGGTTTCGAAGTGGAAATGCGACAAATTATAAAACTTCTCCCGACGGTGCGGCANACAATGCTGTTTTCTGCTACCTTTGACGAAAAGAACGAAAACCTAGCCAACGCTGCTCTAAAAGCTTCTTTGTGTATGGTCGGATCAGCTTCCGATACTGAAGCAACTGTTGAGGGATTGGAAAAAGGTATGTCGTCT]
[-] EMBL CD140493             [                                                                                                                                                                                             AGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATA                                                                                                                                                                                                                                               ]
[-] EMBL CD197243             [                                                                                                                                                                                                          TCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCACTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATA                                                                                                                                                                                                                                               ]
[+] EMBL CD188519             [                                                                                                                                                                                                                                                                            TGTATTCCACAGCTGCTTGAGCACAGGGACCTGATGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAGTTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAAAAGGTGTGACAATTCT                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD157880             [                                                                                                                                                                                                                                                                                                                                                       cacttcgcgGTTGTGGAACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAG                                                                                                                                                                                                     ]
[+] EMBL CD157890             [                                                                                                                                                                                                                                                                                                                                                                       AACTGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAACTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATTTACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAAAAGGCGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAG                                                                                                                                                                                                     ]




>consensus_10534#1
TTGGGCGCCAAAGTTGATCCGAGAGACGCATGATGAGGGAGTTTTCACCTACGAAAAAGC
TGAGGAAAAGACTCAAGAAAATCCGCGAAAAAAACACTGAAAATCACGTCGAGAGTAAGG
ATGCCGCGTTGGATAACCTAGAAGAGTCACAGCCTGGCACGAGTATCTCATTGTCGGGAA
AATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCA
CTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGA
TGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAAC
TGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAA
CTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATT
TACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAA
AAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAA
AGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAG
ATATAGGTTTCGAAGTGGAAATGCGACAAATTATAAAACTTCTCCCGACGGTGCGGCANA
CAATGCTGTTTTCTGCTACCTTTGACGAAAAGAACGAAAACCTAGCCAACGCTGCTCTAA
AAGCTTCTTTGTGTATGGTCGGATCAGCTTCCGATACTGAAGCAACTGTTGAGGGATTGG
AAAAAGGTATGTCGTCT

consensusID : consensus_10534#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 303
fasta sequence

                              [TCGGCACGAGGTGGAAGTTAAGTTTTACTACGAGTTGCTGAACTTTGTGGATACTCCAGTCCTAGCCATCCATGGACGACAAAAACAAGCTAAAAGGACAAGCACCTTTCTTCAGTTTGTAAAAGCTGAATCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGATTTTACAATATGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGACCTCATGA]

[+] EMBL CD077712             [TCGGCACGAGGTGGAAGTTAAGTTTTACTACGAGTTGCTGAACTTTGTGGATACTCCAGTCCTAGCCATCCATGGACGACAAAAACAAGCTAAAAGGACAAGCACCTTTCTTCAGTTTGTAAAAGCTGAATCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGATTTTACAATATGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGACCTCATGA]




>consensus_10534#2
TCGGCACGAGGTGGAAGTTAAGTTTTACTACGAGTTGCTGAACTTTGTGGATACTCCAGT
CCTAGCCATCCATGGACGACAAAAACAAGCTAAAAGGACAAGCACCTTTCTTCAGTTTGT
AAAAGCTGAATCTGCTGTTCTTTTGTGCACTGACGTTGGAGCGCGTGGCCTAGACATACC
AAAGGTTGATTGGATTTTACAATATGATCCACCTGATGATGCCAAAGAGTATATACATCG
AGTTGGTCGTACAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGACCTCA
TGA

consensusID : consensus_10534#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 152
fasta sequence

                              [CTCGTTTATACAATAAGCTNAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAG]

[+] EMBL CD090555             [CTCGTTTATACAATAAGCTNAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAG]




>consensus_10534#3
CTCGTTTATACAATAAGCTNAGAATCTTGAAAAAGGTGTGACAATTCTCGTTGCAACTCC
AGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCTTCCTCCGTCATAATCTTAAAGC
CCTTGTGATCGATGAAGCTGATCGTTTGTTAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10534#1      TTGGGCGCCAAAGTTGATCCGAGAGACGCATGATGAGGGAGTTTTCACCTACGAAAAAGC 60
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      ------------------------------------------------------------
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      TGAGGAAAAGACTCAAGAAAATCCGCGAAAAAAACACTGAAAATCACGTCGAGAGTAAGG 120
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      ----------------CTCGCAGGCCANAATTCGGCACGAGGAGAATCTTGAAAAAGGTG 44
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      ATGCCGCGTTGGATAACCTAGAAGAGTCACAGCCTGGCACGAGTATCTCATTGTCGGGAA 180
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      TGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAAAGTTCT 104
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      AATTTGAAGATTTACCTATATCAGAGCCAATTAAGCGTGCTGTCAAGGAAATGGGCTTCA 240
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      TCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAGATATAG 164
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      CTCATATGACCGATATCCAAGGTAAATGTATTCCACAGCTGCTTGAGCACAGGGACCTGA 300
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      GTTTCGAAGTGGAAATGCGACAAATTATAAAACTTCTCCCGACGGTGCGGCAAACAATGC 224
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      TGGCTTGTGCTAAGACTGGGAGTGGTAAAACACTAGCTTTCTTAATACCTGTTGTGGAAC 360
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      TGTTTTCTGCTACCTTGAACGAAAAGACGAAAAACCTAGCCAACGCTGCTCTAAAAGCTT 284
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      TGATGCTAAACTTGGGTCTGCAGCCTCGTAATGGTACTGGTGCTATAATCATTTCACCAA 420
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      CTTGTGTTATGGTCGGATCAGCTCCCGATACTGAAGCAACTGTTGAGGGATTGGAACAAG 344
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      CTCGTGAACTTAGTCTTCAGACTTATGGTGTGTTAGGAGAACTCATTCAATTCACGAATT 480
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      GGTATGTCGTCTGCCCTCCTGACAGGCGTTTTTGTCTACTGTATACATTTCTCAAGAAAA 404
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      TACGAATTGGCCTTATTATGGGTGGAAGCAACCGACAAACGGAAGCTCAGAATCTTGAAA 540
consensus_10534#3      ---------------------------CTCGTTTATACA-ATAAGCTNAGAATCTTGAAA 32
consensus_10534#0      ATAAAAGTAAAAAGATTATGGTTTTCATGGCTTCGTGTATGGAAGTTAAG--TTTTACTA 462
consensus_10534#2      ---------------------------TCGGCACGAG-GTGGAAGTTAAG--TTTTACTA 30
                                                                 *** * **  * **   *

consensus_10534#1      AAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAA 600
consensus_10534#3      AAGGTGTGACAATTCTCGTTGCAACTCCAGGAAGACTGCTTGATCATTTGTCAAACACAA 92
consensus_10534#0      CGAGT-TGCTGAACTTTGTGGATACTCCAGTCCTAGCCATCCATGGAC-GACAAAAACAA 520
consensus_10534#2      CGAGT-TGCTGAACTTTGTGGATACTCCAGTCCTAGCCATCCATGGAC-GACAAAAACAA 88
                          ** **   *   * ** *  *******    *    *  **     * **** ****

consensus_10534#1      AGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAG 660
consensus_10534#3      AGTTCTTCCTCCGTCATAATCTTAAAGCCCTTGTGATCGATGAAGCTGATCGTTTGTTAG 152
consensus_10534#0      GCTAAAAGGACAAGCACCTTTCTTCAGT--TTGTAAAAGCTGAATCTGCTGTTCTTTTGT 578
consensus_10534#2      GCTAAAAGGACAAGCACCTTTCTTCAGT--TTGTAAAAGCTGAATCTGCTGTTCTTTTGT 146
                         *       *   **   *  *  **   **** *  * **** *** *  * * **  

consensus_10534#1      ATATAGGTTTCGAAGTGGAAATGCGACAAATTATAAAACTTCTCCCGACGGTGCGGCANA 720
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      GCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGAT-------TTTA 631
consensus_10534#2      GCACTGACGTTGGAGCGCGTGGCCTAGACATACCAAAGGTTGATTGGAT-------TTTA 199
                                                                                   

consensus_10534#1      CAATGCTGTTTTCTGCTACCTTTGACGAAAAGAACGAAAACCTAGCCAACGCTGCTCTAA 780
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      CAATA--------TGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTA 683
consensus_10534#2      CAATA--------TGATCCACCTGATGATGCCAAAGAGTATATACATCGAGTTGGTCGTA 251
                                                                                   

consensus_10534#1      AAGCTTCTTTGTGTATGGTCGGATCAGCTT--CCGATACTGAAGCAACTGTTGAGGGATT 838
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      CAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGAC--CTCATGAATTGGA 741
consensus_10534#2      CAGCTCGAGCAGGCAGCACGGGAAATGCTTTACTAGTGTTGAGAC--CTCATGA------ 303
                                                                                   

consensus_10534#1      GGAAAAAGGTATGTCGTCT----------------------------------------- 857
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      GTTCCTGTCAATTTTACGAAAAGCTCGCGTTAAGGTTGTGGAGTATGAAATAGCCAATTC 801
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      ------------------------------------------------------------
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      AAAGATGGCGGATGTGCAACCTGCTTTGGAGAAGTTGATCAAAAACAACTATTTCCTTGC 861
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      ------------------------------------------------------------
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      TCTTTCCGCTCAGGAAGCCTTCAAAGGTATAGTTCGTGCTTACGCTTCGTCTGGCCTAAG 921
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      ------------------------------------------------------------
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      CTGTTTTAATGTAGATGAACTAGACTTGGCCGCAACAGCAAAAACATGTGGACTAACAAT 981
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      ------------------------------------------------------------
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      TACTCCCAAGGTGGATTTGAATGTAAAATCAAAGAGAACACGAGAAAATCCTGGCCAAAA 1041
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      ------------------------------------------------------------
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      GCGTTATAAACCTTTTGGTGTATCTGATAAAAAAGCCAAGAAAGCTAAAATTTATAAACG 1101
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      ------------------------------------------------------------
consensus_10534#3      ------------------------------------------------------------
consensus_10534#0      AATATCTTAATTATATGTAATTCTTCACGCTCTATGTATATATCACAAACATTTTCTGTT 1161
consensus_10534#2      ------------------------------------------------------------
                                                                                   

consensus_10534#1      --------------------------------------------------
consensus_10534#3      --------------------------------------------------
consensus_10534#0      ATAAATAATATACAACTCAAGTAAATGAAAACAATGAGAAATATATAAAT 1211
consensus_10534#2      --------------------------------------------------