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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10539#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1862 fasta sequence
[AGCATATTCAATTTGAGAATTGGTTATTAATGCCAATAAAAATTTAAGCTTAAAATTCGCACACTAAGCATTGAAAAGATTTTTAGAAAATGCAATATACTTTGTAAATTAGGATGGAAGCATGAGGAAAAACGATGAATTATGAAAGACAATCAAGCACATTGCGTTTGCATTGATGTCGATAGGAGATGACTACGATGTTGATTTTGGCATGAAACACCATTTAACTTTTGGGCATCATAACACCGAAGAGGTTCAACAGTTTTTATCCAGTTAACGATGTCATTAGAATTAGTAACGTTCATTATGTAACTTTCGAGTAATTTCTCTATTTTGGGGTTTTCAAGAACCGCAGCATATAGAATTTGATTAAGTAGACGTAAATCTTGTATGGAAATTCCAACACCCGGTTTGATTCGATATGGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTTTACCATTTGGCCAATTAGTAGAGTTGCACAAATTCACGAGAGCTTCATATCGTATTTTTGCTTGTCTGGTAGGTATTGATTTTATGCTTTCTGAAGATAAATCAGCACGTTCAGATAGATGTGATTCATTTAGTTGTTTAGAACCAATCGAATTGACTGAGTTGGAAACACTCTTAACATCTGAATTATTTGTCCTGTGAACATGTATTGGTTGCGTTCTGGGTCTTCTTAGTTTTGAATGAAGATTAAGGGAGACCACATAAGCAACAGAATTATTTTGTAAATCTAAATGAACTGAATTCACTGGGACGTGCCCGTTTGATTCATTTCTGATAAGTGGTGTGGTGTCTGGTTTTTCGATATTTGAAGATCCAACTAACGACAGTGTACTAGAAGCAGATATGTGAGGTCTTTTAGTAAACCAAGGAGTAGTGACACGAAACAAAGTTTTGGAACGAATCAAACTTTTGGCTGTTGCTAGAAGAGCTGCTTTGGATGCCTGAGTTTTTCGCTCGTGGACCAAGTTAAGTAATATAATAAAGTCATCGCTGGCTTCACGAAGCATTAAAAGCTCGTCTCGTTCCGCCAGAGAATCCACTAAGCAATCTGAAAGTTGCATAATTTCGTCATTCATTTGCTGAGCATAAAGCTTGAGAACGCTGGTTTTTAAATTTTGAAGGTCATCTACCCAACTTTGAGTTTTTTTCAAAGGTAGGGAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAATAACCGTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTTGGGAAACCTCGATCAAGAGTTAATGAGCGAGGACTAACTGATACGGATGACAAGGATAAAGTAGTAACAGTGCCTCGTCCTGAATAAATAGATTCGTTTGAGTAATTTAATGCACTACTCGTTTGTAACAAGCTTGTTTTTATAACTCCATCTTCAGTAATTCCATCGGCATCTGCAAGTTCGAATTGATCGAGATCATACAAATTAACATTACTTGGTAAGTTGCGAAGCGGGTAAGACTCAGTGGGTACTAACTCTCTCGTAGCTGCAGCCCACCATTGCTTAACGTCACTTAAAGTTGGAACATTCCCTGAAAAATCACCCCTTCGTGCGTTTTCAGGGTCCACGTCAAAATTTTCGAAACAATGATATATCCTTTCGTCAAAATTTCCAATAAGATCAGTTAGTGAATCCTCAAAAGAGAAACTAGCATCAAATGGGATCGACGAAACTCGTTTTATTTGGTGGTCAGTCTCAGCTACCAATGAGGATGTCTCAGAACCGTCAAAATCATCGTATACACCACCACCCTCGAAGGTGCTAGCGGTGCTCTGGCAACAAATCCT]
[-] EMBL CD078538 [AGCATATTCAATTTGAGAATTGGTTATTAATGCCAATAAAAATTTAAGCTTAAAATTCGCACACTAAGCATTGAAAAGATTTTTAGAAAATGCAATATACTTTGTAAATTAGGATGGAAGCATGAGGAAAAACGATGAATTATGAAAGACAATCAAGCACATTGCGTTTGCATTGATGTCGATAGGAGATGACTACGATGTTGATTTTGGCATGAAACACCATTTAACTTTTGGGCATCATAACACCGAAGAGGTTCAACAGTTTTTATCCAGTTAACGATGTCATTAGAATTAGTAACGTTCATTATGTAACTTTCGAGTAATTTCTCTATTTTGGGGTTTTCAAGAACCGCAGCATATAGAATTTGATTAAGTAGACGTAAATCTTGTATGGAAATTCCAACACCCGGTTTGATTCGATATGGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTTTACCATTTGGCCAATTAGTAGAGTTGCACAAATTCACGAGAGCTTCATATCGTATTTTTGCTTGTCTGGTAGGTATTGATTTTATGCTTTCTGAAGATAAATCAGCACGTTCAGATAGATGTGATTCATTTAGTTGTTTAGAACCAATCGAATTGAC ]
[+] EMBL CD180368 [ AATTAGTAGAGTTGCACAAATTCACGAGAGCTTCATATCGTATTTTTGCTTGTCTGGTAGGTATTGATTTTATGCTTTCTGAAGATAAATCAGCACGTTCAGATAGATGTGATTCATTTAGTTGTTTAGAACCAATCGAATTGACTGGGTTGGAAACACTCTTAACATCTGAATTATTTGTCCTGTGAACATGTATTGGTTGCGTTCTGGGTCTTCTTAGTTTTGAATGAAGATTAAGGGAGACCACATAAGCAACAGAATTATTTTGTAAATCTAAATGAACTGAATTCACTGGGACGTGCCCGTTTGATTCATTTCTG ]
[-] EMBL CD170151 [ TTATGCTTTCTGAAGATAAATCAGCACGTTCAGATAGATGTGATTCATTTAGTTGTTTAGAACCAATCGAATTGACTGAGTTGGAAACACTCTTAACATCTGAATTATTTGTCCTGTGAACATGTATTGGTTGCGTTCTGGGTCTTCTTAGTTTTGAATGAAGATTAAGGGAGACCACATAAGCAACAGAATTATTTTGTAAATCTAAATGAACTGAATTCACTGGGACGTGCCCGTTTGATTCATCTCTGATAA ]
[-] EMBL CD170163 [ TTATGCTTTCTGAAGATAAATCAGCACGTTCAGATAGATGTGATTCATTTAGTTGTCTAGAACCAATCGAATTGACTGAGTTGGAAACACTCTTAACATCTGAATTATTTGTCCTGTGAACATGTATTGGTTGCGTTCTGGGTCTTCTTAGTTTTGAATGAAGATTAAGGGAGACCACATAAGCAACAGAATTATTTTGTAAATCTAAATGAACTGAATTCACTGGGACGTGCCCGTTTGACTCATTTCTGATAA ]
[-] EMBL AI977467 [ TGTATTGGTTGCGTTCTGGGTCTTCTTAGTCTTGAATGAAGATTAAGGGAGACCACATAAGCAGCAGAGTTATTTTGTAAATCTAAATGAACTGAATTCACTGGGACGTGCCCGTTTGATTCATTTCTGATAAGTGGTGTGGTGTCTGGTTTTTCGATATTTGAAGATCCAACTATCGACAGTGTACTAGAAGCAGATATGTGAGGTCTTTTAGTAAACCAAGGAGTAGTGACACGAAACAAAGTTTTGGAACGAATCAAACTTTTGGCTGTTGCTAGAAGAGCTGCTTTGGATGCCTGAGTTTTTCGCTCGTGGACCAAGTTAAGTAATATAATAAAGTCATCGCTGGCTTCACGAAGCATTAAAAGCTCGTCTCGTTCCGCCAGAGAATCCACTAAGCAATCTGAAAGTTGCATAATTTCGTCATTCATTTGCTGAGCATAAAGCTTGAGAACGCTGGTTTTTAAATTTTGAAGGTCATCTACCC ]
[-] EMBL CD169056 [ CTGGGTCTTCTTAGTTTTGAATGAAGATTAAGGGAGACCACATAAGCAACAGAATTATTTTGTAAATCTAAATGAACTGAATTCACTGGGACGTGCCCGTTTGATTCATTTCTGATAAGTGGTGTGGTGCCTGGTTTTTCGATATTTGAAGATCCAACTAACGACAGTGTACTAGAAGCAGATATGTGAGGTCTTTTAGTAAACCAAGGAGTAGTGACACGAAACAAAGTTTTGGAACGAATCAAACTTTTGGCTGTTGCTAGAAGAGCTGCTTTGGGTGCCTGAGTTTTTCGCTCGTGGACCAAGTTAAGTAATATAATAAAGTCATCGCTGGCTTCACGAAGCATTAAAAGCTCGTCTCGTTCCGCCAGAGAATCCACTAAGCAATCTGAAAGTTGCATAATTTCGTCATTCATTTGCTGAGCATAAAGCTTGAGAACGCTGGTTTTTAAATTTTGAAGGTCATCTACCCAACTTTGAGTTTTTTTCAAAGGTAGGGAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAAT ]
[-] EMBL CD194732 [ ATTTGAAGATCCAACTAACGACAGTGTACTAGAAGCAGATATGTGAGGTCTTTTAGTAAACCAAGGAGTAGTGACACGAAACAAAGTTTTGGAACGAATCAAACTTTTGGCTGTTGCTAGAAGAGCTGCTTTGGATGCCTGAGTTTTTCGCTCGTGGACCAAGTTAAGTAATATAATAAAGTCATCGCTGGCTTCACGAAGCATTAAAAGCTCGTC ]
[+] EMBL CD131091 [ CGTGGACCAAGTTAAGTAATATAATAAAGTCATCGCTGGCTTCACGAAGCATTAAAAGCTCGTCTCGTTCCGCCAGAGAATCCACTAAGCAATCTGAAAGTTGCATAATTTCGTCATTCATTTGCTGAGCATAAAGCTTGAGAACGCTGGTTTTTAAATTTTGAAGGTCATCTACCCAACTTTGAGTTTTTTTCAAAGGTAGGGAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAATAACCGTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTTGGGAAACCTCGATCAAGAGTTAATGAGCGAGGACTAA ]
[+] EMBL CD178125 [ CAACTTTGAGTTTTTTTCAAAGGTAGGGAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAATAACCGTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTTGGGAAACCTCGATCAAGAGTTAATGAGCGAGGACTAACTGATACGGATGACAAGGATAAAGTAGTAACAGTGCCTCGTCCTGAATAAATAGATTCGTTTGAGTAATTTAATGCACTACTCGTTTGTAACAAGCTTGTTTTTATAACTCCATCTTCAGTAATTCCATCGGCATCTGCAAGTTCGAATTGATCGAGATCATACAAATTAACATTACTTGGTAAGTTGCGAAGCGGGTAAGACTCAGTGGGTACTAACTCTCTCGTAGCTGCAGCCCACCATTGCTTAACGTCACTTAAAGTTGGAACATTCCCTGAAAAATCACCCCTTCGTGCGTTTTCAGGGTCCACGTCAAAATTTTCGAAACAATGATATATCCTTTCGT ]
[+] EMBL CD189960 [ TTCGTTTGAGTAATTTAATGCACTACTCGTTTGTAACAAGCTTGTTTTTATAACTCCATCTTCAGTAATTCCATCGGCATCTGCAAGTTCGAATTGATCGAGATCATACAAATTAACATTACTTGGTAAGTTGCGAAGCGGGTAAGACTCAGTGGGTACTAACTCTCTCGTAGCTGCAGCCCACCATTGCTTAACGTCACTTAAAGTTGGAACATTCCCTGAAAAATCACCCCTTCGTGCGTTTTCAGGGTCCACGTCAAAATTTTCGAAACAATGATATATCCTTTCGTCAAAATTTCCAATAAGATCAGTTAGTGAATCCTCAAAAGAGAAACTAGCATCAAATGGGATCGACGAAACTCGTTTTATTTGGTGGTCAGTCTCAGCTACCAATGAGGATGTCTCAGAACCGTCAAAATCATCGTATACACCACCACCCTCGAAGGTGCTAGCGGTGCTCTGGCAACAAATCCT]
consensusID : consensus_10539#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1186 fasta sequence
[TATGACATGATCAAAACAATAAAATATTGCACAATTCACAGGAAAATGAAGGTAACCCCCACTTTTTAAAGCGCATATAGTAATGCCAAAAATGAACAAAAAATATGTAATATATAAGTCCAGTTAAAAAGGCTATCTTAACAACAAAAAACAAGTTATAATCATGTTTAGTCCCGAAGCCAATAGTGAGCAAAAATCATGAACACTGTTTCCCTATTATTAATATGGTGGGGGAAAGCATGTTAACAAATGTCTTTATTGGGGGATATACAACGAAAGCATTAATAAAAACTTGCCTTTAACGTTGAATTCATATAGAAACAAAAGAGCAAAAGTAAATGATAAGTTTGGTAACAATAAAAGATAACCAATTAGGGAAATTACATGACAACTTAAGTGAATAAAATTTAAAGAGATGAAAAAATGAAGTTGAAAAAAGCACTAGGGGCTCAAATTAATGACATAAAATTCCATTTAGATTTAAATATATGGGGGAAATCAAATCGGGTTCAATTTTAATGTAGGGAAAGCTGTAAACATTAAACAAAACTGAATTGTAAC-TGTTAAAAGTAATAAAATGCATACGCTGTCCAGCATATTCAATNTGAGAATTGGTTATTAATGCCAATAAAAATTTAAGCTTAAAATTCGCACACTAAGCATTGAAAAGATTTTTAGAAAATGCAATATACTTTGTAAATTAGGATGGAAGCATGAGGAAAAACGATGAATTATGAAAGACAATCAAGCACATTGCGTTTGCATTGATGTCGATAGGAGATGACTACGATGTTGATTTTGGCATGAAACACCATTTAACTTTTGGGCATCATAACACCGAAGAGGTTCAACAGTTTTTATCCAGTTAACGATGTCATTAGAATTAGTAACGTTCATTATGTAACTTTCGAGTAATTTCTCTATTTTGGGGTTTTCAAGAACCGCAGCATATAGAATTTGATTAAGTAGACGTAAATCTTGTATGGAAATTCCAACACCCGGTTTGATTCGATATGGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTTTACCATTTGGCCAATTAGTAGAGTTGCACAAATTCACGAGAGCTTCATATCGTATTTTTGCTTGTCTGGTAGGTATTGATTATATGCTTTCTGAAGATAAATCAGCACGTTCAGACCTCGTGCCGAATCTGGCT]
[+] EMBL CD074641 [TATGACATGATCAAAACAATAAAATATTGCACAATTCACAGGAAAATGAAGGTAACCCCCACTTTTTAAAGCGCATATAGTAATGCCAAAAATGAACAAAAAATATGTAATATATAAGTCCAGTTAAAAAGGCTATCTTAACAACAAAAAACAAGTTATAATCATGTTTAGTCCCGAAGCCAATAGTGAGCAAAAATCATGAACACTGTTTCCCTATTATTAATATGGTGGGGGAAAGCATGTTAACAAATGTCTTTATTGGGGGATATACAACGAAAGCATTAATAAAAACTTGCCTTTAACGTTGAATTCATATAGAAACAAAAGAGCAAAAGTAAATGATAAGTTTGGTAACAATAAAAGATAACCAATTAGGGAAATTACATGACAACTTAAGTGAATAAAATTTAAAGAGATGAAAAAATGAAGTTGAAAAAAGCACTAGGGGCTCAAATTAATGACATAAAAT ]
[+] EMBL CD073005 [ AAACAAGTTATAATCATGTTTAGTCCCGAAGCCAATAGTGAGCAAAAATCATGAACACTGTTTCCCTATTATTAATATGGGGGGGGAAAGCATGTTAACAAATGTTTTTATTGGGGGATATACAACGAAAGCATTAATAGAAACTTGCCTTTAACGTTGAATTCATTTAAAAACAAAAGAGCAAAAGTAAATGATAAGTTTGGGAACAATAAAAGATAACCAATTAGTGAAATTACATGACAACTTAAGTGAATAAAATTTAAAGAAATGAAAAAATGAAGTTGAAAAAAGCACTAGGGGCTCAAATTAATGACATAAAATTCCATTTAGATTTAAATATATGGGGGAAATCAAATCGGGTTCAATTTTAATGTAGGGAAAGCTGTAAACATTAAACAAAACTGAATTGTAACTTGTTAAAAGTAATAAAATGCATACGCT ]
[-] EMBL CD080716 [ tGAAAGCTGTAGACATTAGACAAAACTGAATTGTAAC TGTTAAAAGTAATANAATGCATACGCTGTCCAGCATATTCAATNTGAGAATTGGTTATTAATGCCAATAAAAATTTAAGCTTAAAATTCGCACACTAAGCATTGAAAAGATTTTTAGAAAATGCAATATACTTTGTAAATTAGGATGGAAGCATGAGGAAAAACGATGAATTATGAAAGACAATCAAGCACATTGCGTTTGCATTGATGTCGATAGGAGATGACTACGATGTTGATTTTGGCATGAAACACCATTTAACTTTTGGGCATCATAACACCGAAGAGGTTCAACAGTTTTTATCCAGTTAACGATGTCATTAGAATTAGTAACGTTCATTATGTAACTTTCGAGTAATTTCTCTATTTTGGGGTTTTCAAGAACCGCAGCATATAGAATTTGATTAAGTAGACGTAAATCTTGTATGGAAATTCCAACACCCGGTTTGATTCGATATGGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTTTACCATTTGGCCAATTAGTAGAGTTGCACAAATTCACGAGAGCTTCATATCGTATTTTTGCTTGTCTGGTAGGTATTGATTATATGCTTTCTGAAGATAAATCAGCACGTTCAGACCTCGTGCCGAATCTGGCT]
consensusID : consensus_10539#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 433 fasta sequence
[TCGTCATTCATTTGCTGAGCATAAAGCTTGAGAACGCTGGTTTTTAAATTTTGAAGGTCATCTACCCAACTTTGAGTTTTTTTCAAAGGTAGG-GAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAATAACCGTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTTGGGAAACCTCGATCAAGAGTTAATGAGCGAGGACTAACTGATACAGATGACAAGGATAAAGTAGTAACAGTGCCTCGTCCTGAATAAATAGATTCGTTTGAGTAATTTAATGCACTACTCGTTTGTAACAAGCTTGTTTTTATAACTCCATCTTCAGTAATTCCATCGGCATCTGCAAGTTCGAATTGATCTTCAATAATACTAGTGCCTAGTTGTTAAC]
[-] EMBL CD188382 [TCGTCATTCATTTGCTGAGCATAAAGCTTGAGAACGCTGGTTTTTAAATTTTGAAGGTCATCTACCCAACTTTGAGTTTTTTTCAAAGGTAGG GAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAATAACCGTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTTGGGAAACCTCGATCAAGAGTTAATGAGCGAGGACTAACTGATACAGATGACAAGGATAAAGTAGTAACAGTGCCTCGTCCTGAATAAATAGATTCGTTTGAGTAATTTAATGCACTACTCGTTTGTAACAAGCTTGTTTTTATAACTCCATCTTCAGTAATTCCATCGGCATCTGCAAGTTCGAATTGATCTTCAATAATACTAGTGCCTAGTTGTTAAC]
[-] EMBL CD181387 [ TTTNAATTTTGAAGGTCACCTACCCAACTTTGAGTTTTTTTCAAAGGTAGG GAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAATAACCGTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTTGGGAAACCTCGATCAAGAGTTAATGAGCGAGGACTAACTGATACAGATGACAAGGATAAAGTAGTAACAGTGCCTCGTCCTGAATAAATAGATTCGTTTGAGTAATTTAATGCACTACTCGTTTGTAACAAGCTTGTTTTTATAACTCCATCTTCA ]
[-] EMBL CD181235 [ TTTTAATTTTGAAGGTCATCTACNCCACTTTGAG TTTTTCAAA GTAGGAAAAGGATGGTGGGATTGGAAAACCTCAAGGATGTTTTCATCATCAAAATCTTTAAAATAACCGTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTTGGGAAACCTCGATCAAGAGTTAATGAGCGAGGACTAACTGATACAGATGACAAGGATAAAGTAGTAACAGTGCCTCGTCCTGAATAAATAGATTCGTTTGAGTAATTTAATGCACTACTCGTTTGTAACATGCTTGTTTTTATAACTCCATCTTCA ]
consensusID : consensus_10539#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 433 fasta sequence
[GTTCTACTGAGACTAAAGATGCGGCTGCCTATCACATGGGATGGTGTATACCCAAAAATAGCTCAATCGCCACCAGCATGGAGATTTCGAGAAGCCAATATCGTGATTAGATGGGGCCGAGTGAACGCGGATTTGTAGACACTCTAGCCATGCGTTGCATGAGTCGGTAGAGACGACTACGAGTGATTTGCATGAACACCATTTACTTTGGCATCCTAACACCGAGAGGTCAACAGTTTTATCCAGTTCACGAGTCATAGAATAGTCACGTTCATAAGTAACTTCGGATAAATTCTCTAATTTGGGGTTCTCAAGAACCGCCAGCGATATAGAATTCGAGTAAGTAGACGTAAATCTCGTATGGAAATTCCAAACATCCCGGTTTGATTCGATATGCGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTG]
[-] EMBL AW146482 [GTTCTACTGAGACTAAAGATGCGGCTGCCTATCACATGGGATGGTGTATACCCAAAAATAGCTCAATCGCCACCAGCATGGAGATTTCGAGAAGCCAATATCGTGATTAGATGGGGCCGAGTGAACGCGGATTTGTAGACACTCTAGCCATGCGTTGCATGAGTCGGTAGAGACGACTACGAGTGATTTGCATGAACACCATTTACTTTGGCATCCTAACACCGAGAGGTCAACAGTTTTATCCAGTTCACGAGTCATAGAATAGTCACGTTCATAAGTAACTTCGGATAAATTCTCTAATTTGGGGTTCTCAAGAACCGCCAGCGATATAGAATTCGAGTAAGTAGACGTAAATCTCGTATGGAAATTCCAAACATCCCGGTTTGATTCGATATGCGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 AGCATATTCAATTTGAGAATTGGTTATTAATGCCAATAAAAATTTAAGCTTAAAATTCGC 60
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 ACACTAAGCATTGAAAAGATTTTTAGAAAATGCAATATACTTTGTAAATTAGGATGGAAG 120
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 CATGAGGAAAAACGATGAATTATGAAAGACAATCAAGCACATTGCGTTTGCATTGATGTC 180
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 GATAGGAGATGACTACGATGTTGATTTTGGCATGAAACACCATTTAACTTTTGGGCATCA 240
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 TAACACCGAAGAGGTTCAACAGTTTTTATCCAGTTAACGATGTCATTAGAATTAGTAACG 300
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 TTCATTATGTAACTTTCGAGTAATTTCTCTATTTTGGGGTTTTCAAGAACCGCAGCATAT 360
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 AGAATTTGATTAAGTAGACGTAAATCTTGTATGGAAATTCCAACACCCGGTTTGATTCGA 420
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 TATGGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTTTACCATTTGGCCAATTAGTA 480
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 -------------TATGACATGATCAAAACAATAAAATATTGCACAATTCACAGGAAAAT 47
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 GAGTTGCACAAATTCACGAGAGCTTCATATCGTATTTTTGCTTGTCTGGTAGGTATTGAT 540
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 GAAGGTAACCCCCACTTTTTAAAGCGCATATAGTAATGCCAAAAATGAACAAAAAATATG 107
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 TTTATGCTTTCTGAAGATAAATCAGCACGTTCAGATAGATGTGATTCATTTAGTTGTTTA 600
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 TAATATATAAGTCCAGTTAAAAAGGCTATCTTAACAACAAAAAACAAGTTATAATCATGT 167
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 GAACCAATCGAATTGACTGAGTTGGAAACACTCTTAACATCTGAATTATTTGTCCTGTGA 660
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 TTAGTCCCGAAGCCAATAGTGAGCAAAAATCATGAACACTGTTTCCCTATTATTAATATG 227
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 ACATGTATTGGTTGCGTTCTGGGTCTTCTTAGTTTTGAATGAAGATTAAGGGAGACCACA 720
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 GTGGGGGAAAGCATGTTAACAAATGTCTTTATTGGGGGATATACAACGAAAGCATTAATA 287
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 TAAGCAACAGAATTATTTTGTAAATCTAAATGAACTGAATTCACTGGGACGTGCCCGTTT 780
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 AAAACTTGCCTTTAACGTTGAATTCATATAGAAACAAAAGAGCAAAAGTAAATGATAAGT 347
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 GATTCATTTCTGATAAGTGGTGTGGTGTCTGGTTTTTCGATATTTGAAGATCCAACTAAC 840
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 TTGGTAACAATAAAAGATAACCAATTAGGGAAATTACATGACAACTTAAGTGAATAAAAT 407
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 GACAGTGTACTAGAAGCAGATATGTGAGGTCTTTTAGTAAACCAAGGAGTAGTGACACGA 900
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 TTAAAGAGATGAAAAAATGAAGTTGAAAAAAGCACTAGGGGCTCAAATTAATGACATAAA 467
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 AACAAAGTTTTGGAACGAATCAAACTTTTGGCTGTTGCTAGAAGAGCTGCTTTGGATGCC 960
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ATTCCATTTAGATTTAAATATATGGGGGAAATCAAATCGGGTTCAATTTTAATGTAGGGA 527
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 TGAGTTTTTCGCTCGTGGACCAAGTTAAGTAATATAATAAAGTCATCGCTGGCTTCACGA 1020
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 AAGCTGTAAACATTAAACAAAACTGAATTGTAACTGTTAAAAGTAATAAAATGCATACGC 587
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 AGCATTAAAAGCTCGTCTCGTTCCGCCAGAGAATCCACTAAGCAATCTGAAAGTTGCATA 1080
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 TGTCCAGCATATTCAATNTGAGAAT-TGGTTATTAATGCCA-ATAAAAATTTAAGCTTAA 645
consensus_10539#3 -----GTTCTACTGAGACTAAAGATGCGGCTGCCTATCACATGGGATGGTGTATACCCAA 55
consensus_10539#0 ATTTCGTCATTCATTTGCTGAGCATAAAGCT--TGAGAACG-CTGGTTTTTAAATTTTGA 1137
consensus_10539#2 ---TCGTCATTCATTTGCTGAGCATAAAGCT--TGAGAACG-CTGGTTTTTAAATTTTGA 54
* * * ** * * * * * * *
consensus_10539#1 AATTCGCACACTAAGCATT-GAAAAGATTTTTAGAAAATGCAATATACTTTGTAAATTAG 704
consensus_10539#3 AAATAGCTCAATCGCCACCAGCATGGAGATTTCGAGAAGCCAATAT----CGTGATT--A 109
consensus_10539#0 AGGTCATCTACCCAACTTT-----GAGTTTTTTTCAAAGGTAGGGAA------GGAT--- 1183
consensus_10539#2 AGGTCATCTACCCAACTTT-----GAGTTTTTTTCAAAGGTAGGGAA------GGAT--- 100
* * * * *** ** * *
consensus_10539#1 GATGGAAGCATGAGGAAAAACGATGAATTATGAAAGACAATCAAGCACATTGCGTTTGCA 764
consensus_10539#3 GATGGGGCCGAGTG----AACGCGGATTTGT---AGACACTCTAGC-CAT-GCGTT-GCA 159
consensus_10539#0 GGTGGGATTGGAAA--ACCTCAAGGATGTTT---TCATCATCAAAATCTTTAAAATAACC 1238
consensus_10539#2 GGTGGGATTGGAAA--ACCTCAAGGATGTTT---TCATCATCAAAATCTTTAAAATAACC 155
* *** * ** * * * ** * * * * *
consensus_10539#1 TTGATGTCGATAGGAGATGACTACGATGTTGATTTTGGCATGAAACACCATTTAACTTTT 824
consensus_10539#3 TGA--GTCGGTAG-AGACGACTACGAG--TGATTT--GCATGAA-CACCATTTACTTT-- 209
consensus_10539#0 GTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTT-- 1296
consensus_10539#2 GTTTAGCTCTTCATCAGTGTTTGAGATTCCACTATCGGGGATTTGTGCAAATGTATTT-- 213
* * * * ** * * * * * * **
consensus_10539#1 GGGCATCATAACACCGAAGAGGTTCAACAGTTTTTATCCAGTTAACG-ATGTCATTAGAA 883
consensus_10539#3 -GGCATCCTAACACCGAGAGG--TCAACAGTTTT-ATCCAGTTCACG-A-GTCAT-AGAA 262
consensus_10539#0 GGGAAACCT--CGATCAAGAG--TTAATGAGCGAGGACTAACTGATACGGATGACAAGGA 1352
consensus_10539#2 GGGAAACCT--CGATCAAGAG--TTAATGAGCGAGGACTAACTGATACAGATGACAAGGA 269
** * * * * * * * ** * * * * * * ** *
consensus_10539#1 TTAGTAACGTTCATTATGTAACTTTCGAGTAATTTCTCTATTTTGGGGTTTTCAA-GAAC 942
consensus_10539#3 T-AGTCACGTTCATAA-GTAACTT-CGGATAAATTCTCTAATTTGGGGTTCTCAA-GAAC 318
consensus_10539#0 TAAAGTAGTAACAGTGCCTCGTCC-TGAATAAATAGATTCGTTTGAGTAATTTAATGCAC 1411
consensus_10539#2 TAAAGTAGTAACAGTGCCTCGTCC-TGAATAAATAGATTCGTTTGAGTAATTTAATGCAC 328
* * * ** * * *** * * **** * * ** * **
consensus_10539#1 CGC-AGC-ATATAGAATTTGATTAAGTAGACGTAAATCTTGTATGGAAATTCCAA-CA-C 998
consensus_10539#3 CGCCAGCGATATAGAATTCGAGTAAGTAGACGTAAATCTCGTATGGAAATTCCAAACATC 378
consensus_10539#0 TACTCGT-TTGTAACAAGCTTGTTTTTATAACTCCATCTT---CAGTAATTCCAT-CGGC 1466
consensus_10539#2 TACTCGT-TTGTAACAAGCTTGTTTTTATAACTCCATCTT---CAGTAATTCCAT-CGGC 383
* * * ** * * ** * * **** * ******* * *
consensus_10539#1 CCGGTTTGATTCGATATG-GTATACATAAAAGTAAGGATCGGCTATTTTGTGGTTTACCA 1057
consensus_10539#3 CCGGTTTGATTCGATATGCGTATACATAAAAGTAAGGATCGGCTATTTTGTGGTG----- 433
consensus_10539#0 ATCTGCAAGTTCGAATTGATCGA-GATCATACAAATTAACATTACTTGGTAAGTTGCGAA 1525
consensus_10539#2 ATCTGCAAGTTCGAATTGATCTTCAATAATACTAGTGCCTAGTTGTTAAC---------- 433
***** ** ** * * * **
consensus_10539#1 TTTGGCCAATTAGTAGAGTTGCACAAATTCACGAGAGCTTCATATCGTATTTTTGCTTGT 1117
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 GCGGGTAAGACTCAGTGGGTACTAACTCTCTCGTAGCTGCAGCCCACCATTGCTTAACGT 1585
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 CTGGTAGGTATTGATTATATGCTTTCTGAAGATAAATCAGCACGTTCAGACCTCGTGCCG 1177
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 CACTTAAAGTTGGAACATTCCCTGAAAAATCACCCCTTCGTGCGTTTTCAGGGTCCACGT 1645
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 AATCTGGCT--------------------------------------------------- 1186
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 CAAAATTTTCGAAACAATGATATATCCTTTCGTCAAAATTTCCAATAAGATCAGTTAGTG 1705
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 AATCCTCAAAAGAGAAACTAGCATCAAATGGGATCGACGAAACTCGTTTTATTTGGTGGT 1765
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 ------------------------------------------------------------
consensus_10539#3 ------------------------------------------------------------
consensus_10539#0 CAGTCTCAGCTACCAATGAGGATGTCTCAGAACCGTCAAAATCATCGTATACACCACCAC 1825
consensus_10539#2 ------------------------------------------------------------
consensus_10539#1 -------------------------------------
consensus_10539#3 -------------------------------------
consensus_10539#0 CCTCGAAGGTGCTAGCGGTGCTCTGGCAACAAATCCT 1862
consensus_10539#2 -------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||