cluster # 10543

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Schistosoma mansoni
cluster # 10543 cluster # 10543 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10543#0 length = 1887 sequences # 16

consensus_10543#1 length = 337 sequences # 1

consensusID : consensus_10543#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1887
fasta sequence

                              [GAAGGAAACGGAGGCGGGATTCTGTTTTCGAGCTCCTCTACCTGTCTGCGACTTGGAAGGTGATGTACCGCTTTATCGTGACACGAAACGACTAAAGTTATGCTCATCCCGTGTCTCCAGTGTTTACGAGCGAATATTCAATCGCAATTCTCGGGATCTTAGTGGAAAAGAGAAAAGCAACAACACCACAACTCATAACGGCTATTCCCTCGGAAATCTACTACCATCCGTGAGTTTAAAGGCATTTAGTCGGCCTGGTGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAATCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCTTCAGCTCTACTCCGTTTAATGGTCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACGGCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTTATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCGGCAATGTAATCTTTCACCAATTCTTCCAACCAACCGAATCCAGCCAATTGACCACCATAGTACGAATGATCAAACTGTCTCTGTCCCAACTTCAGATACCAGTGACTTGAAAACTCGTGCGTGGCTTGAAAGTATTGCAGAATCTCCCTACTTATCGGATAACTGGCTTAACAACTTGACCTCAAGCTATCAGGCTAAAAAGAATGAACGTGAACGTGAATATGAGTTGGCAAAAGCAAACATACGATTTTGGGAAAAGCAGCGTGCTTCAGCTGAAAAAGAGCGTATTGACAATCTTGAACAGAGACTTGCTTG-TTTACTAAGATCACCTCCTATTTTGGAAGATCCATATTTGGTACCTCAACCTATTCCTATTGAACTGCCATATAA-ACCTGTCAAAGTTAAAGAACCTAAAGTACCAACTCTCCCTGTTTTAACTGCACCTCAACTAGCTCAGGTTGAAGCAGCTCTTCGTACTGGTTCTCCAGATGAATTACTTGTAGATAAATTTAAATTAGTTGTTACACGTCGTGAACTAATGACATTAACTGGAACAAATTGGTTAAGTGATATGGTAATCAATTTCTACTTANCAATTATTAC-ACGTCGAAGTCAACATCAAACANATCTTCCTCGTATCGCTGTGTTATCAACATTTTTTTATGCAAAGTTAACAGCACCGATAGGTGGAGGTTATTCAGGAGTGCGACGTTGGACACGACAAATAAAATTATTTGATCAAGATATTATACTTATTCCAATTCATGACAGAGGAATGCATTGGTGTTTAAGTTGTATCGATTTACGTGTTAAAACGATAACATATTACGATTCAATGGGTTCTGGTAATATGAAGTGTTTGAATCAGTTAATGGATTATTTGAAAAATGAATCATTAGACAAAAGAAATGTTGAACTGAAAGACCCGGATTCTTGGAAACTCGTCAATACAGAGGACACTGTGCCTCAACAGTACAACGGCTCCGACTGTGGTGTTTTCCTGTGTACATTTGGTGAATTCATCTCTCGTGATGCTTCATTTACATTTAGTCAGGATGATATGCCAGGAATACGTAAACGTATGATGTATGAAATATTGACACAACAATTACTAACCACAAATTTCAAATTAAATGATGGTGATGATGACAAATAGAGTAAGAAAAAGAAAAGTTTTTTTGT-GTTTTGAATAGAAACTACTTTTTTGATGCGGTCGTTGTTCTTTTCTTTCTTTCTTTTTTTCTCTTTTCTCAATTGTATTGTATGTACGGCTTCTATGTCTTTTTTTTCCTTACAAATTT-GTACACAATAAGTTTTATTTACAAAAGAGTTTTGAAGACAGTCTTT]

[-] EMBL CD071578             [GAAGGAAACGGAGGCGGGATTCTGTTTTCGAGCTCCTCTACCTGTCTGCGACTTGGAAGGTGATGTACCGCTTTATCGTGACACGAATCGACTAAAGTTATGCTCATCCCGTGTCTCCAGTGTTTACGAGCGAATATTCAATCGCAATTCTCGGGATCTTAGTGGAAAAGAGAAAAGCAACAACACCACAACTCATAACGGCTATTCCCTCGGAAATCTACTACCATCCGTGAGTTTAAAGGCATATAGTCGGCCTGGTGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAATCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCTTCAGCTCTACTCCGTTTAATGGTCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACGGCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTTATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCAGCAATGTAATCTTTCACCAATTCTTCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD131100             [      AACGGAGGCGGGATTCTGTTTTCGAGCTCCTCTACCTGTCTGCGACTTGGAAGGTGATGTACCGCTTTATCGTGACACGAAACGACTAAAGTTATGCTCATCCCGTGTCTCCAGTGTTTACGAGCGAATATTCAATCGCAATTCTCGGGATCTTAGTGGAAAAGAGAAAAGCAACAACACCACAACTCATAACGGCTATTCCCTCGGAAATCTACTACCATCCGTGAGTTTAAAGGCATTTAGTCGGCCTGGTGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAATCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD179200             [                 GATTCTGTTTTCGAGCTCCTCTACCTGTCTGCGAGTTGGAAGGTGATGTACCGCTTTATCGTGACACGAAACGACTAAAGTTATGCTCATCCGGTGTCTCCAGTGTTTACGAGCGAATATTCAATCGCAATTCTCGGGATCTTAGTGGAAAAGAGAAAAGCAACAACACCACAACTCATAACGGCTAAGCTCTCGGAAATCTACTACCATCCGTGAGTTTAAAGGCATTTAGCCGGCCTGGTGATGTTTGTCATTATTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD200946             [                                                                                                                                                                            AAAAGCAACAACACCACAACTCATAACGGCTATTCCCTCGGAAATCTACTACCATCCGTGAGTTTAAAGGCATTTAGTCGGCCTGGAGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAATCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCTTCAACTCTACTCCGTTTAATGGTCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACGGCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTTATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCGGCAATGTAATCTTTCACCAATTCTTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD190970             [                                                                                                                                                                                                                            CTACCATCCGTGAGTTTAAAGGCATTTAGTCGGCCTGGTGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAATCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCTTCAGCTCTACTCCGTTTAATGGTCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACGGCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTTATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCGGCAATGTAATCTTTCACCAATTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD190911             [                                                                                                                                                                                                                            CTACCATCCGTGAGTTTAAAGGCATTTAGTCGGCCTGGTGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAATCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCTTCAGCTCTACTCCGTTTAATGGTCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACGGCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTTATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCGGCAATGTAATCTTTCACCAATTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD096962             [                                                                                                                                                                                                                                                                                                                                                     GCTCTACTCCGTTTAATGGTCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACGGCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTTATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCAGCAATGTAATCTTTCACCAATTCTTCCAACCAACCGAATCCAGCCAATTGACCACCATAGTACGAATGATCAAACTGTCTCTGTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD079246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTATTGCGGCAATGTAATCTTTCACCAATTCTTCCAACCAACCGAATCCAGCCAATTGACCACCATAGTACGAATGATCAAACTGTCTCTGTCCCAACTTCAGATACCAGTGACTTGAAAACTCGTGCGTGGCTT AAAGTATTGCAGAATCTCCCTACTTATCGGATAACTGGCTTAACAACTTGACCTCAAGCTATCAGGCTAAAAAGAATGAACGTGAACGTGAATATGAGTTGGCAAAAGCAAACATACGATTTTGGGAAAAGCAGCGTGCTTCAGCTGAAAAAGAGCGTATTGACAATCTTGAACAGAGACTTGCTTG TTTACTAAGATCACCTCCTATTTTGGAAGATCCATATTTGGTACCTCAACCTATTCCTATTGAACTGCCATATAA ACCTGTCAAAGTTAAAGAACCTAAAGTACCAACTCTCCCTGTTTTAACTGCACCTCAACTAGCTCAGGTTGAAGCAGCTCTTCGTACTGGTTCTCCAGATGAATTACTTGTAGATAAATTTAAATTAGTTGTTACACGTCGTGAACTAATGACATTAACTGGAACAAATTGGTTAAGTGATATGGTAATCAATTTCTACTTANCAATTATTAC ACGTCGAAGTCAACATCAAACANAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD139576             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCAGCCAATTGACCACCATAGTGCGAATGATCAAACTGTCTCTGTCCCAACTTCAGATACCAGTGACTTGAAAACTCGTGCGTGGCTTGAAAGTATTGCAGAATCTCCCTACTTATCGGATAACTGGCTTAACAACTTGACCTCAAGCTATCAGGCTAAAAAGAATGAACGTGAACGTGAATATGAGTTGGCAAAAGCAAACATACGATTTTGGGAAAAGCAGCGTGCTTCAGCTGANAAAGAGCGTATTGACAATCTTGAACAGAGACTTGCTTGTTTTACT AGATCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD139586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCAGCCAATTGACCACCATAGTACGAATGATCAAACTGTCTCTGTCCCAACTTCAGATACCAGTGACTTGAAAACTCGTGCGTGGCTTGAAAGTATTGCAGAATCTCCCTACTTATCGGATAACTGGCTTAACAACTTGACCTCAAGCTATCAGGCTAAAAAGAATGAACGTGAACGTGAATATGAGTTGGCAAAAGC AACATACGATTTTGNGAAAAGCAGCGTGCTTCAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD181121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATGAACGTGAACGTGAATATGAGTTGGCAAAAGCAAACATACGATTTTGGGAAAAGCAGCGTGCTTCAGCTGAAAAAGAGCGTATTGACAATCTTGAACAGAGACTTGCTTG TTTACTAAGATCACCTCCTATTTTGGAAGATCCATATTTGGTACCTCAACCTATTCCTATTGAACTGCCATATAA ACCTGTCAAAGTTAAAGAACCTAAAGTACCAACTCTCCCTGTTTTAACTGCACCTCAACTAGCTCAGGTTGAAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD083049             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAACTGCCATATAAGACCTGTCAAAGTTAAAGAACCTAAAGTACCAACTCTCCCTGTTTTAACTGCACCTCAACTAGCTCAGGTTGAAGCAGCTCTTCGTACTGGTTCTCCAGATGAATTACTTGTAGATAAATTTAAATTAGTTGTTACACGTCGTGAACTAATGACATTAACTGGAACAAATTGGTTAAGTGATATGGTAATCAATTTCTACTTA CAATTATTACAACGTCGAAGTCAACATCAAACAAATCTTCCTCGTATCGCTGTGTTATCAACATTTTTTTATGCAAAGTTAACAGCACCGATAGGTGGAGGTTATTCAGGAGTGCGACGTTGGACACGACAAATAAAATTATTTGATCAAGATATTATACTTATTCCAATTCATGACAGAGGAATGCATTGGTGTTTAAGTTGTATCGATTTACGTGTTAAAACGATAACATATTACGATTCAATGGGTTCTGGTAATATGAAGTGTTTGAATCAGTTAATGGATTATTTGAAAAATGAATCATTAGACAAAAGAAATGTTGAACTGAAAGACCCGGATTCTTGGAA                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD132690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACATTTTTTTATGCAAAGTTAACAGCACCGATAGGTGGAGGTTATTCAGGAGTGCGACGTTGGACACGACAAATAAAATTATTTGATCAAGATATTATACTTATTCCAATTCATGACAGAGGAATGCATTGGTGTTTAAGTTGTATCGATTTACGTGTTAAAACGATAACATATTACGATTCAATGGGTTCTGGTAATATGAAGTGTTTGAATCAGTTAATGGATTATTTGAAAAATGAATCATTAGACAAAAGAAATGTTGAACTGAAAGACCCGGATTCTTGGAAACTCGTCAATACAGAGGACACTGTGCCTCAACAGTACAACGGCTCCGACTGTGGTGTTTTCCTGTGTACATTTGGTGAATTCATCTCTCGTGATGCTTCATTTACATTTAGTCA                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD076624             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTTAAAACGATAACATATTACGATTCAATGGGTTCTGGTAATATGAAGTGTTTGAATCAGTTAATGGATTATTTGAAAAATGAATCATTAGACAAAAGAAATGTTGAACTGAAAGACCCGGATTCTTGGAAACTCGTCAATACAGAGGACACTGTGCCTCAACAGTACAACGGCTCCGACTGTGGTGTTTTCCTGTGTACATTTGGTGAATTCATCTCTCGTGATGCTTCATTTACATTTAGTCAGGATGATATGCCAGGAACACGTAAACGTATGATGTATGAAATATTGACACAACAATTACTAACCCCAAATTTCAAATTAAATGATGGTGATGATGACAAATAGAGTAAGAAAAAGAAAAGTTTTTTTGT GTTTTGAATAGAAACTACTTTTTTGATGCGGTCGTTGTTCTTTTCTTTCTTTCTTTTTTTCTCTTTTCTCAATTGTATTGTATGTACGGCTTCTATGTCTTTTTTTTCCTTACAAATTT GTACACAATAAGTTTTATTTACAAAAGAGTTTTGAAGACAGTCTTT]
[+] EMBL CD142647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGAAAAATGAATCATTAGACAAAAGAAATGTTGAACTGAAAGACCCGGATTCTTGGAAACTCGTCAATACAGAGGACACTGTGCCTCAACAGTACAACGGCTCCGACTGTGGTGTTTTCCTGTGTACATTTGGTGAATTCATCTCTCGTGATGCTTCATTTACATTTAGTCAGGATGATATGCCAGGAATACGTAAACGTATGATGTATGAAATATTGACACAACAATTACTAACCACAAATTTCAAATTAAATGATGGTGATGATGACNAATAGAGTAAGAAAAAGAACAGTTTTTTTGT GTTTTGAATAGAAACTACTTT                                                                                                                                                 ]
[+] EMBL SM772                [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGAATACGTAAACGTATGATGTATGAAATATTGACACAACAATTACTAACCACAAATTTCAAATTAAATGATGGTGATGATGACAAATAGAGTAAGAAAAAGAAAAGTTTTTTTGTGGTTTTGAATAGAAACTACTTTTTTGATGCGGTCGCCGCNCTTTTCTTTCTTTCTTTTNTTCTCTTTTCTCAATTGTATTGTATGTACGGCTTCTATGTCTTTTNTTTCCTTACAAATTTGGTACACAATAAGTTTTATTTACA                       ]




>consensus_10543#0
GAAGGAAACGGAGGCGGGATTCTGTTTTCGAGCTCCTCTACCTGTCTGCGACTTGGAAGG
TGATGTACCGCTTTATCGTGACACGAAACGACTAAAGTTATGCTCATCCCGTGTCTCCAG
TGTTTACGAGCGAATATTCAATCGCAATTCTCGGGATCTTAGTGGAAAAGAGAAAAGCAA
CAACACCACAACTCATAACGGCTATTCCCTCGGAAATCTACTACCATCCGTGAGTTTAAA
GGCATTTAGTCGGCCTGGTGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAA
TCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCTTCAGCTCTACTCCGTTTAATGG
TCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACG
GCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTT
ATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCG
GCAATGTAATCTTTCACCAATTCTTCCAACCAACCGAATCCAGCCAATTGACCACCATAG
TACGAATGATCAAACTGTCTCTGTCCCAACTTCAGATACCAGTGACTTGAAAACTCGTGC
GTGGCTTGAAAGTATTGCAGAATCTCCCTACTTATCGGATAACTGGCTTAACAACTTGAC
CTCAAGCTATCAGGCTAAAAAGAATGAACGTGAACGTGAATATGAGTTGGCAAAAGCAAA
CATACGATTTTGGGAAAAGCAGCGTGCTTCAGCTGAAAAAGAGCGTATTGACAATCTTGA
ACAGAGACTTGCTTGTTTACTAAGATCACCTCCTATTTTGGAAGATCCATATTTGGTACC
TCAACCTATTCCTATTGAACTGCCATATAAACCTGTCAAAGTTAAAGAACCTAAAGTACC
AACTCTCCCTGTTTTAACTGCACCTCAACTAGCTCAGGTTGAAGCAGCTCTTCGTACTGG
TTCTCCAGATGAATTACTTGTAGATAAATTTAAATTAGTTGTTACACGTCGTGAACTAAT
GACATTAACTGGAACAAATTGGTTAAGTGATATGGTAATCAATTTCTACTTANCAATTAT
TACACGTCGAAGTCAACATCAAACANATCTTCCTCGTATCGCTGTGTTATCAACATTTTT
TTATGCAAAGTTAACAGCACCGATAGGTGGAGGTTATTCAGGAGTGCGACGTTGGACACG
ACAAATAAAATTATTTGATCAAGATATTATACTTATTCCAATTCATGACAGAGGAATGCA
TTGGTGTTTAAGTTGTATCGATTTACGTGTTAAAACGATAACATATTACGATTCAATGGG
TTCTGGTAATATGAAGTGTTTGAATCAGTTAATGGATTATTTGAAAAATGAATCATTAGA
CAAAAGAAATGTTGAACTGAAAGACCCGGATTCTTGGAAACTCGTCAATACAGAGGACAC
TGTGCCTCAACAGTACAACGGCTCCGACTGTGGTGTTTTCCTGTGTACATTTGGTGAATT
CATCTCTCGTGATGCTTCATTTACATTTAGTCAGGATGATATGCCAGGAATACGTAAACG
TATGATGTATGAAATATTGACACAACAATTACTAACCACAAATTTCAAATTAAATGATGG
TGATGATGACAAATAGAGTAAGAAAAAGAAAAGTTTTTTTGTGTTTTGAATAGAAACTAC
TTTTTTGATGCGGTCGTTGTTCTTTTCTTTCTTTCTTTTTTTCTCTTTTCTCAATTGTAT
TGTATGTACGGCTTCTATGTCTTTTTTTTCCTTACAAATTTGTACACAATAAGTTTTATT
TACAAAAGAGTTTTGAAGACAGTCTTT

consensusID : consensus_10543#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 337
fasta sequence

                              [GTACGATTATTGGATACAAAACTTTGGAGGAAATAATGACAAACATCACCAGGCCGACTAAATGCCTTTAAACTCACGGATGGTAGCCGCGCCCCCTTCTGGCCATAGTAACATGGTGAATCCTCGTAGGCCCTTCTGGGGAAGAATGCTACATCAAAGCAAGGCAAAACTACTGGGGCTCAATAGCTGTTTTTAAACTTTTTGGGCAGAGTCATCACATCTTTCTTTTTTTGGGGGCAGACTCATTCATTCATTCTTTTTAAACCTATAATAATTATGCAATGATTCTTTGTAGCTTTCGTAATCAGTTGTGGGTATAGGTAAAGTGGATGATTAG]

[+] EMBL CD185503             [GTACGATTATTGGATACAAAACTTTGGAGGAAATAATGACAAACATCACCAGGCCGACTAAATGCCTTTAAACTCACGGATGGTAGCCGCGCCCCCTTCTGGCCATAGTAACATGGTGAATCCTCGTAGGCCCTTCTGGGGAAGAATGCTACATCAAAGCAAGGCAAAACTACTGGGGCTCAATAGCTGTTTTTAAACTTTTTGGGCAGAGTCATCACATCTTTCTTTTTTTGGGGGCAGACTCATTCATTCATTCTTTTTAAACCTATAATAATTATGCAATGATTCTTTGTAGCTTTCGTAATCAGTTGTGGGTATAGGTAAAGTGGATGATTAG]




>consensus_10543#1
GTACGATTATTGGATACAAAACTTTGGAGGAAATAATGACAAACATCACCAGGCCGACTA
AATGCCTTTAAACTCACGGATGGTAGCCGCGCCCCCTTCTGGCCATAGTAACATGGTGAA
TCCTCGTAGGCCCTTCTGGGGAAGAATGCTACATCAAAGCAAGGCAAAACTACTGGGGCT
CAATAGCTGTTTTTAAACTTTTTGGGCAGAGTCATCACATCTTTCTTTTTTTGGGGGCAG
ACTCATTCATTCATTCTTTTTAAACCTATAATAATTATGCAATGATTCTTTGTAGCTTTC
GTAATCAGTTGTGGGTATAGGTAAAGTGGATGATTAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10543#0      GAAGGAAACGGAGGCGGGATTCTGTTTTCGAGCTCCTCTACCTGTCTGCGACTTGGAAGG 60
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      TGATGTACCGCTTTATCGTGACACGAAACGACTAAAGTTATGCTCATCCCGTGTCTCCAG 120
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      TGTTTACGAGCGAATATTCAATCGCAATTCTCGGGATCTTAGTGGAAAAGAGAAAAGCAA 180
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      CAACACCACAACTCATAACGGCTATTCCCTCGGAAATCTACTACCATCCGTGAGTTTAAA 240
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GGCATTTAGTCGGCCTGGTGATGTTTGTCATTATTTCCTCCAAAGTTTTGTATCCAATAA 300
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      TCGTACCTACTCGCAAAAAATGAGGCAGTCATCTGTCTTCAGCTCTACTCCGTTTAATGG 360
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      TCACACAAAGTCATCTCTAAAGAAAAATCACATTTCATCTGAAAGACAGATATACCAACG 420
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GCTATTAGATAAGGCGTCATCATTTTCCCGAACTCCTGCTGGCAAACCTACGAATAATTT 480
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      ATATGGTCCCATCACTATAAATCTAGACGAAATTAAAGATAATCACTGTTCTTTATTGCG 540
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GCAATGTAATCTTTCACCAATTCTTCCAACCAACCGAATCCAGCCAATTGACCACCATAG 600
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      TACGAATGATCAAACTGTCTCTGTCCCAACTTCAGATACCAGTGACTTGAAAACTCGTGC 660
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GTGGCTTGAAAGTATTGCAGAATCTCCCTACTTATCGGATAACTGGCTTAACAACTTGAC 720
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      CTCAAGCTATCAGGCTAAAAAGAATGAACGTGAACGTGAATATGAGTTGGCAAAAGCAAA 780
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      CATACGATTTTGGGAAAAGCAGCGTGCTTCAGCTGAAAAAGAGCGTATTGACAATCTTGA 840
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      ACAGAGACTTGCTTGTTTACTAAGATCACCTCCTATTTTGGAAGATCCATATTTGGTACC 900
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      TCAACCTATTCCTATTGAACTGCCATATAAACCTGTCAAAGTTAAAGAACCTAAAGTACC 960
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      AACTCTCCCTGTTTTAACTGCACCTCAACTAGCTCAGGTTGAAGCAGCTCTTCGTACTGG 1020
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      TTCTCCAGATGAATTACTTGTAGATAAATTTAAATTAGTTGTTACACGTCGTGAACTAAT 1080
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GACATTAACTGGAACAAATTGGTTAAGTGATATGGTAATCAATTTCTACTTANCAATTAT 1140
consensus_10543#1      ---------------------GTACGATTATTGGATACAAAACTTTGGAGGAAATAATGA 39
                                            **    * **  * **   ** **      *   * *  

consensus_10543#0      TACACGTCGAAGTCAACATCAAACANATCTTCCTCGTATCGCTG-TGTTATCAACATTTT 1199
consensus_10543#1      CAAACATCA----CCAGGCCGACTAAATGCCTTTAAACTCACGGATGGTAGCCGCGCCCC 95
                        * ** **     * *   * *  * **     *    ** * * ** ** *  *     

consensus_10543#0      TTTATG-CAAAGTTAACAGCACCGATAGGTGGAGGTTATTCAGGAGTGCGACGTTGGA-C 1257
consensus_10543#1      CTTCTGGCCATAGTAACATGGTGAATCCTCGTAGGCCCTTCTGGGGAAGAATGCTACATC 155
                        ** ** * *   *****      **    * ***   *** ** *    * * *  * *

consensus_10543#0      ACGACAAA-TAAAATTATTTGATCAAGATA-TTATACTTATTCCAATTCATGACAGAGGA 1315
consensus_10543#1      AAAGCAAGGCAAAACTACTGGGGCTCAATAGCTGTTTTTAAACT--TTTTGGGCAGAGTC 213
                       *   ***   **** ** * *  *   ***  * *  ***  *   **   * *****  

consensus_10543#0      AT-GCATTGGTGTTTAAGTTGTATC-GATTTACGTGTTAAAACGATAACATATTACGATT 1373
consensus_10543#1      ATCACATCTTTCTTTTTTTGGGGGCAGACTCATTCATTCATTCTTTTTAAACCTATAATA 273
                       **  ***   * ***   * *   * ** * *    ** *  *  *   *   **  ** 

consensus_10543#0      CAATGGGTTCTGGTAATATGAAGTGTTTG-AATCAGTTAATGGATTATTTGAAAAATGAA 1432
consensus_10543#1      -ATTATGCAATGATTCTTTGTAGCTTTCGTAATCAGTTGTGGG--TATAGGTAAAGTGGA 330
                        * *  *   ** *  * ** **  ** * ********   **  ***  * *** ** *

consensus_10543#0      TCATTAGACAAAAGAAATGTTGAACTGAAAGACCCGGATTCTTGGAAACTCGTCAATACA 1492
consensus_10543#1      TGATTAG----------------------------------------------------- 337
                       * *****                                                     

consensus_10543#0      GAGGACACTGTGCCTCAACAGTACAACGGCTCCGACTGTGGTGTTTTCCTGTGTACATTT 1552
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GGTGAATTCATCTCTCGTGATGCTTCATTTACATTTAGTCAGGATGATATGCCAGGAATA 1612
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      CGTAAACGTATGATGTATGAAATATTGACACAACAATTACTAACCACAAATTTCAAATTA 1672
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      AATGATGGTGATGATGACAAATAGAGTAAGAAAAAGAAAAGTTTTTTTGTGTTTTGAATA 1732
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GAAACTACTTTTTTGATGCGGTCGTTGTTCTTTTCTTTCTTTCTTTTTTTCTCTTTTCTC 1792
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      AATTGTATTGTATGTACGGCTTCTATGTCTTTTTTTTCCTTACAAATTTGTACACAATAA 1852
consensus_10543#1      ------------------------------------------------------------
                                                                                   

consensus_10543#0      GTTTTATTTACAAAAGAGTTTTGAAGACAGTCTTT 1887
consensus_10543#1      -----------------------------------