These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10548#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2087 fasta sequence [TGAGGGAGGCTGGGCACATTTTCGTGTTTCCTATCTCCACCTTCCAGAGTTCTTTGTTTCTTAGCAATCACAAACATTTCAAAGTATGCCTCTATTTGGTAAGCCAAAAAGCCCTCGTGAATTAATCCAAACTGTTAATGAGAACATAATCATTTTAAGTAACTGTGCCAAAACCGATAAAGAGCGGAAAAAAGCTGTTGAAGATATAGCAAGGGCTTTGACTGCTCTTCGGGAGCTGCTGACGGATAAGTCAGATACTCGATTGACTGGCAAAGAACGTGATTCAGAATTATCGAACTCTGAACGAGCACGAATTAATGAAATCATAACGGATGTAACTCATGAAATCATCAACCTCAATCTTTTGCCGCTTCTTGTAAACAATTTGGATGTCATCGAGTTTGAGAGTTCTAAACATATCGTTGATCTTTTCGGCCATATTATGAGGCGACAGGTAGGATCTTATAATCCTGCAGCTCAATATCTTTTGGCTAACTCTCAAATTTTAATATCTATCCTTCAAGGATACTCCAAACCTGACACTGCTATACACTATGGTGCAATGCTTCGGGATGCATGCCGACATGAATCTTTAGCCAAAGTTGTTCTTCGTTCACCAGAATTTTATCAGTTATTTGAACACGTACAAGGCACAGCATTTGATGTGAGCTCAGATGCTTTCGCTACATTGAAAGATTTGCTTACTCGTCATAAGGCGCTTGTAGCAGATTTTCTAACAGCTAATTATGATGTCTTTTTCGACCATTATATGCATATGATTTTATCAGATAATTACGTCACAAAAAGGCAAGCATTAAAGTTGTTAGGAGAGCTTTTACTTGATCGGCATAACATCTCAATAATGACCAAGTATATTGCAGATCCGGAAAACCTCAAAGTCATTATGAATATGTTGAAAAGTAAAGAAAAGCAAATTGCTTTTGAAGCGTTTCATTGTTTTAAGGTGTTTGTTGCAAATCCAAACAAGCCACCAGCTGTTCATATGATTCTATTTCGTAATCAGGAAAAATTACTATCCTTTCTGACAGATTTTCAAACTGAACGTACAGATGATGGTCAATTCAATGATGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCTATTTCGTCTAATCCAAATCCCACCTAATTGAGCTCAATTCCGCGTTCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTTAATGTGTCAGATTTGTATAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTAGTCAGTACTCGTTCTTAGATCCTCTGACACGCTTTGTGTAATGATGGATAAATATTCTGTCAGTAATTATCTTTATGTTGCAAAGACTTGAATATTTTTGAGAAAACTGTATTATTTACCATAAGCCATTTTCATGTATTATCTCATA-ACTTTACTGACAGGAGAAGAGTAATTTTTAATGCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGT-TACAGTTATTACCATCATACATTGTTAATCCGAGTTATTGGCTATAAATAATTTTACAACTCTTTCCTCATACAATTTTCTGTTTTTTGCATAGAAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAAC-TTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATG-ATAGTTCTGTGTAGTTAAGTCCTGCATA-TCATTCAGCCTGTTGGTTNTTCCCNGTTTG-NTTNCAC-TTTNCTGCTAGA-TTTCTGCATA-TAAAGACTA-TAGNNTG-NGAAGTGTCAGA--AAA-TGGNATTCCTTTTTCGTANCTATNAGAGNATTNTTGTGGACTATAAAATGTTTTGAGTAAAATCATATNACTACTATTACCCCTTTGATGATGANNATAAAGAGAATGGATCTGTCTCTCTTCTAACGTTTTTCCTCGACCGTTTTTTCCTTCAGGA] [+] EMBL AW017188 [TGAGGGAGGCTGGGCACATTTTCGTGTTTCCTATCTCCACCTTCCAGAGTTCTTTGTTTCTTAGCAATCACAAACATTTCAAAGTATGCCTCTATTTGGTAAGCCAAAAAGCCCTCGTGAATTAATCCAAACTGTTAATGAGAACATAATCATTTTAAGTAACTGTGCCAAAACCGATAAAGAGCGGAAAAAAGCTGTTGAAGATATAGCAAGGGCTTTGACTGCTCTTCGGGAGCTGCTGACGGATAAGTCAGATACTCGATTGACTGGCAAAGAACGTGATTCAGAATTATCGAACTCTGAACGAGCACGAATTAATGAAATCATAACGGATGTAACTCATGAAATCATCAACCTCAATCTTTTGC ] [+] EMBL CD194830 [ AAGTCAGATACTCGATTGACTGGCAAAGAACGTGATTCAGAATTATCGAACTCTGAACGAGCACGAATTAATGAAATCATAACGGATGTAACTCATGAAATCATCAACCTCAATCTTTTGCCGCTTCTTGTAAACAATTTGGATGTCATCGAGTTTGAGAGTTCTAAACATATCGTTGATCTTTTCGGCCATATTATGAGGCGACAGGTAGGATCTTATAATCCTGCAGCTCAATATCTTTTGGCTAACTCTCAAATTTTAATATCTATCCTTCAAGGATACTCCAAACCTGACACTGCTATACACTATGGTGCAATGCTTCGGGATGCATGCCGACATGAATCTTTAGCCAAAGTTGTTCTTCGTTCACCAGAATTTTATCAGTTATTTGAACACGTACAAGGCACAGCATTTGATGTGAGCTCAGATGCTTTCGCTACATTGAAAGATTTGCTTACTCGTCATAAGGCGCTTGTAGCAGATTTTCTAACAGCTAATTATGGTGTCTTTTTCGACCATTATATGCATATGATTNTATCAGAATATTACGTCACAAAAAGGC ] [-] EMBL CD194681 [ CATGCCGACATGAATCTTTAGCCAAAGTTGTTCTTCGTTCACCAGAATTTTATCAGTTATTTGAACACGTACAAGGCACAGCATTTGATGTGAGCTCAGATGCTTTCGCTACATTGAAAGATTTGCTTACTCGTCATAAGGCGCTTGTAGCAGATTTTCTAACAGCTAATTATGATGTCTTTTTCGACCATTATATGCACATGATTTTATCAGATAATTACGTCACAAAAAGGCAAGCATTAAAGTTGTTAGGAGAGCTTTTACTTGATCGGCATAACATCTCAATAATGACCAAGTATATTGCAGATCCGGAAAACCTCAAAGTCATTATGAATATGTTGAAAAGTAAAGAAAAGCAAATTGCTTTTGAAGCGTTTCATTGTTTTAAGGTGTTTGTTGCAAATCCAAACAAGCCACCAGCTGTTCATATGATTCTATTTCGTAATCAGGAAAAATTACTATCCTTTCTGACAGATTTTCAAACTGAACGTACAGATGATGGTCAATTCAATGATGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCTATTT ] [-] EMBL CD090484 [ TTTTCTAACAGCTAATTATGATGTCTTTTTCGACCATTATATGCATATGATTTTATCAGATAATTACGTCACAAAAAGGCAAGCATTAAAGTTGTTAGGAGAGCTTTTACTTGATCGGCATAACATCTCAATAATGACCAAGTATATTGCAGATCCGGAAAACCTCAAAGTCATTATGAATATGTTGAAAAGTAAAGAAAAGCAAATTGCTTTTGAAGCGTTTCATTGTTTTAAGGTGTTTGTTGCAAATCCAAACAAGCCACCAGCTGTTCATATGATTCTATTTCGTAATCAGGAAAAATTACTATCCTTTCTGACAGATTTTCAAACTGAACGTACAGATGATGGTCAATTCAATGATGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCTATTTCGTCTAATCCAAA ] [-] EMBL CD167875 [ TCACAAAAAGGCAAGCATTAAAGTTGTTAGGAGAGCTTTTACTTGATCGGCATAACATCTCAATAATGACCAAGTATATTGCAGATCCGGAAAACCTCAAAGTCATTATGAATATGTTGAAAAGTAAAGAAAAGCAAATTGCTTTTGAAGCGTTTCATTGTTTTAAGGTGTTTGTTGCAAATCCAAACAAGCCACCAGCTGTTCATATGATTCTATTTCGTAATCAGGAAAAATTACTATCCTTTCTGACAGATTTTCAAACTGAACGTACAGATGATGGTCAATTCAATGATGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCT ] [-] EMBL CD167876 [ TTCTGACAGATTTTCAAACTGAACGTACAGATGATGGTCAATTCAATGATGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCTAT ] [+] EMBL CD082075 [ aacctcATTCAATGATGAAAAACAGTATTTGATC TACAAATCAGAGAATTAACACCAGTGCCTATTTCGTCTAATCCAAATCCCACCTAATTGAGCTCAATTCCGCGTTCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTTAATGTGTCAGATTTGTATAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTAGTCAGTACTCGTTCTTAGATCCTCTGACACGCTTTGTGTAATGATGGATAAATATTCTGTCAGTAATTATCTTTATGTTGCAAAGACTTGAATATTTTTGAGAAAACTGTATTATTTACCATAAGCCATTTTCATGTATTATCTCATA ACTTTACTGACAGGAGAAGAGTAATTTTTAATGCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGT TACAGTTATTACCATCATACATTGTTAATCCGAGTTATTGGCTATAAATAATTTTACAACTCTTTCCTCATACAATTTTCTGTTTTTTGCATAGAAATTNTTTCTTTATTTCATTCACTCGAATCATTTATTNTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGNCATATCTTAATTGGACAAATTAGCTGTATTTTGCAACTTTTTTTTGTAC ACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTNCTTAGACGTCCACCTGTCTTT CATGNATAG TCTGTGTAGTTAAGTCCTGCATA TCATTCAGCCTGTTGGTTNTTCCCNGTTTG NTTNCAC TTTNCTGCTAGA TTTCTGCATA TAAAGACTA TAGNNTG NGAAGTGTCAGA AAA TGGNATTCCTTTTTCGTANCTATNAGAGNATTNTTGTGGACTATAAAATGTTTTGAGTAAAATCATATNACTACTATTACCCCTTTGATGATGANNATAAAGAGAATGGATCTGTCTCTCTTCTAACGTTTTTCCTCGACCGTTTTTTCCTTCAGGA] [+] EMBL CD082783 [ gaggcTCAATGATGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCTATTTCGTCTAATCCAAATCCCACCTAATTGAGCTCAATTCCGCGTTCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTTAATGTGTCAGATTTGTATAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTAGTCAGTACTCGTTCTTAGATCCTCTGACACGCTTTGTGTAATGATGGATAAATATTCTGTCAGTAATTATCTTTATGTTGCAAAGACTTGAATATTTTTGAGAAAACTGTATTATTTACCATAAGCCATTTTCATGTATTATCTCATA ACTTTACTGACAGGAGAAGAGTAATTTTTAATGCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGT TACAGTTATTACCATCATACATTGTTAATCCGAGTTATTGGCTATAAATAATTNTACAACTCTNTCCTCATACAATTNTCTGTTTTTTGCATAGAAATTTTTTCTTTATTTCATTCACT ] [-] EMBL CD162400 [ CGCGTTCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTTAATGTGTCAGATTTGTATAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTAGTCAGTACTCGTTCTTAGATCCTCTGACACGCTTCGTGTAATGATGGATAAATATTCTGTCAGTAATTATCTTTATGTTGCAAAGACTTGAATATTTTTAAGAAAACTGTATTATTTACCATAAGCCATTTTCATGTATTATCTCATA ACTTTACTGACAGGAGAAGAGTAATTTTTAATGCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGT TACAGTTATTACCATCATACATTGTTAATCCGAGTTATTGGCTATAA ] [-] EMBL CD177708 [ ATTTTCATGTA TATCTCATACNTTTTACTGACAGNAGAAGAGTAATTNTNAATGCTTCTGTTGGGTGATATTCCTCATGTTGTATACTACAC TGTANNCAGTTATTACCATCATACATTGTTAATCCGAGTTATTGGCTATAAATAATTTTACAACTCTTTCCTCATACAATTTTCTGTTTTTTGCATAGAAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAAC TTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATG GTAGTTCTGTGTAGTTAAGTCCTGCA ] [+] EMBL CD146787 [ GTAATTTTTAATGCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGT TACAGTTATTACCATCATACATTGTTAATCCGAGTTATTGGCTATAAATAATTTTACAACTCTTTCCTCATACAATTTTCTGTTTTTTGCATAGAAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAAC TTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATG ATAGTTCTG ] [+] EMBL CD129684 [ CATCATACATTGTTAATCCGAGTTATTGCCTATAAATAATTTTACAACTCTTTCCTCATACAATTTTCTGTTTTTTGCATAGAAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTCTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAAC TTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATG ATAGTTCTGTGTAGTTAAGTCCTGCATATTCATTCAGCCTGTTGGTTTTTCCCGTTTTGTTTTCCACTTTTCCTGCTAGATTTTCTGCATATTAAAGACTATTAG TTGCGGAAGTGTCAGAGGAAATTGGATTTCTTTTTTCGT ] consensusID : consensus_10548#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 599 fasta sequence [TAGAAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAACTTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATGATAGTTCTGTGTAGTTAAGTCCTGCATATTCATTCAGCCTGTTGGTTTTTCCCGTTTTGTTTTCCACTTTTCCTGCTAGATTTTCTGCATATTAAAGACTATTAGTTGCGGAAGTGTCAGAGAAATTGGATTTCTTTTTTCGTAGTCTATGTAGAGTATTTTTGTTGGACTAATAAAAATGTTTTTGATGTAAAAAATCATTATTCACTTACTATTTAACCTTTTTTGATAGTATGTAGTAATAATAGAGTAATTGAATTCTGTTCTCTCTCTCCTAAACTGTTTCTTCCTCCGATACGTATTTCTTTACATTACAGTACATTCAATAATTCTGAATCCCTATTTTCCTATCTATGATTTTCTTTTTACTGTTAATATTATGATTGT] [-] EMBL CD075690 [TAGAAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAACTTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATGATAGTTCTGTGTAGTTAAGTCCTGCATATTCATTCAGCCTGTTGGTTTTTCCCGTTTTGTTTTCCACTTTTCCTGCTAGATTTTCTGCATATTAAAGACTATTAGTTGCGGAAGTGTCAGAGAAATTGGATTTCTTTTTTCGTAGTCTATGTAGAGTATTTTTGTTGGACTAATAAAAATGTTTTTGATGTAAAAAATCATTATTCACTTACTATTTAACCTTTTTTGATAGTATGTAGTAATAATAGAGTAATTGAATTCTGTTCTCTCTCTCCTAAACTGTTTCTTCCTCCGATACGTATTTCTTTACATTACAGTACATTCA ] [-] EMBL BF936240 [ TCGAATCATTTATTTAAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAACTTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATGATAGTTCTGTGTAGTTAAGTCCTGCATATTCATTCAGCCTGTTGGTTTTTCCCGTTTTGTTTTCCACTTTTCCTGCTAGATTTTCTGCATATTAAAGACTATTAGTTGCGGAAGTGTCAAAGAAATTGGATTTCTTTTTTCGTAGTCAATGTAGAGTATTTTTGTTGGACTAATAAAAATGTTTTTGATGTAAAAAATCATTATTCACTTACTACTTAACCTTTTTTGATAGTATGTAGTAATAATAGAGTAATTGAATTCTGTTCT ] [-] EMBL CD076375 [ CCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAACTTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATGATAGTTCTGTGTAGTTAAGTCCTGCATATTCATTCAGCCTGTTGGTTTTTCCCGTTTTGTTTTCCACTTTTCCTGCTAGATTTTCTGCATATTAAAGACTATTAGTTGCGGAAGTGTCAGAGAAATTGGATTTCTTTTTTCGTAGTCTATGTAGAGTATTTTTGTTGGACTAATAAAAATGTTTTTGATGTAAAAAATCATTATTCACTTACTATTTAACCTTTTTTGATAGTATGTAGTAATAATAGAGTAATTGAATTCTGTTCTCTCTCTCCTAAACTGTTTCTTCCTCCGATACGTATTTCTTTACATTACAGTACATTCAATAATTCTGAATCCCTATTTTCCTATCTATGATTTTCTTTTTACTGTTAATATTATGATTGT] consensusID : consensus_10548#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 447 fasta sequence [ATCGGCACGAGGTGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCTATTTCGTCTAATCCAAATCCCACCTAATTGAGCTCAATTCCGCGTTCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTTAATGTGTCAGATTTGTATAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTAGTCAGTACTCGTTCTTAGATCCTCTGACACGCTTCGTGTAATGATGGATAAATATTCTGTCAGTAATTATCTTTATGTTGCAAAGACTTGAATATTTTTAAGAAAACTGTATTATTTACCATAAGCCATTTTCATGTATTATCTCATAACTTTACTGACAGGAGAAGAGTAATTTTTAATGCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGTTACAGTTATTACCAT] [+] EMBL CD083925 [ATCGGCACGAGGTGAAAAACAGTATTTGATCAAACAAATCAGAGAATTAAAACCAGTGCCTATTTCGTCTAATCCAAATCCCACCTAATTGAGCTCAATTCCGCGTTCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTTAATGTGTCAGATTTGTATAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTAGTCAGTACTCGTTCTTAGATCCTCTGACACGCTTCGTGTAATGATGGATAAATATTCTGTCAGTAATTATCTTTATGTTGCAAAGACTTGAATATTTTTAAGAAAACTGTATTATTTACCATAAGCCATTTTCATGTATTATCTCATAACTTTACTGACAGGAGAAGAGTAATTTTTAATGCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGTTACAGTTATTACCAT] consensusID : consensus_10548#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 407 fasta sequence [TCGTGTTTCCTATCTCCACCTTCCAGAGTTCTTTGTTTCTTAGCAATCACAAACATTTCAAAGTATGCCTCTATTTGGTAAGCCAAAAAGCCCTCGTGAATTAATCCAAACTGTTAATGAGAACATAATCATTTTAAGTAACTGTGCCAGAACCGATAAAGAGCGGAAAAAAGCTGTTGAAGATATAGCAAGGGCTTTGACTGCTCTTCGGGAGCTGCTGACGGATAAGTCAGATACTCGATTGACTGGCAAAGAACGTGATTCAGAATTATCGAACTCTGAACGAGCACGAATTAATGAAATCATAACGGATGTAACTCATGAAATCATCAACCTCAATCTTTTGCCGCTTCTTGTAAACAATTTGGATGTCATCGAGTTTGAGGTATATGCTCTTTTGCCAGGCC] [-] EMBL CD170213 [TCGTGTTTCCTATCTCCACCTTCCAGAGTTCTTTGTTTCTTAGCAATCACAAACATTTCAAAGTATGCCTCTATTTGGTAAGCCAAAAAGCCCTCGTGAATTAATCCAAACTGTTAATGAGAACATAATCATTTTAAGTAACTGTGCCAGAACCGATAAAGAGCGGAAAAAAGCTGTTGAAGATATAGCAAGGGCTTTGACTGCTCTTCGGGAGCTGCTGACGGATAAGTCAGATACTCGATTGACTGGCAAAGAACGTGATTCAGAATTATCGAACTCTGAACGAGCACGAATTAATGAAATCATAACGGATGTAACTCATGAAATCATCAACCTCAATCTTTTGCCGCTTCTTGTAAACAATTTGGATGTCATCGAGTTTGAGGTATATGCTCTTTTGCCAGGCC] consensusID : consensus_10548#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 273 fasta sequence [ACCCTCATAGGTTCGCAGGTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAACTTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATGATAGTTCTGTGTAGTTAAGTCCTGCGAACCTATGAGGGGATCCTCTAGAGTCGGCGGCGGACACA] [-] EMBL CD060724 [ACCCTCATAGGTTCGCAGGTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTGCAACTTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTTTCCATGATAGTTCTGTGTAGTTAAGTCCTGCGAACCTATGAGGGGATCCTCTAGAGTCGGCGGCGGACACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10548#1 -----------------TAGAAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTT- 42 consensus_10548#4 ---------------------ACCCTCATAGGTTCGCAGGTCACTCGAATCATTTATTT- 38 consensus_10548#3 ---------------------TCGTGTTTCCTATCTCCACCTTCCAGAGTTCTTTGTTTC 39 consensus_10548#0 TGAGGGAGGCTGGGCACATTTTCGTGTTTCCTATCTCCACCTTCCAGAGTTCTTTGTTTC 60 consensus_10548#2 ---------------------------ATCGGCACGAGGTGAAAAACAGTATTTGATCA- 32 * * * ** * consensus_10548#1 TAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATAT-CTTAAT 101 consensus_10548#4 TAGTTGTTCATTTGGATTAATGAGGAATATTTTTTATCCGTATTCTGCAATAT-CTTAAT 97 consensus_10548#3 TTAGCAATCACAAACATTT-CAAAGTATGCCTCTATTTGGTAAGCCAAAAAGC-CCTCGT 97 consensus_10548#0 TTAGCAATCACAAACATTT-CAAAGTATGCCTCTATTTGGTAAGCCAAAAAGC-CCTCGT 118 consensus_10548#2 -AACAAATCA-GAGAATTA-AAACCAGTGCCTATTTCGTCTAATCCAAATCCCACCTAAT 89 *** *** * * * * ** * * * * * consensus_10548#1 TGGACAAATTAG-CTGTATTTTGCAAC----TTTTTTTGTACAACTCT--CAAATTTTGT 154 consensus_10548#4 TGGACAAATTAG-CTGTATTTTGCAAC----TTTTTTTGTACAACTCT--CAAATTTTGT 150 consensus_10548#3 GAATTAATCCAAACTGTTAATGAGAACATAATCATTTTAAGTAACTGTGCCAGAACCGAT 157 consensus_10548#0 GAATTAATCCAAACTGTTAATGAGAACATAATCATTTTAAGTAACTGTGCCAAAACCGAT 178 consensus_10548#2 TGAGCTCAATTCCGCGTTCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTT 149 ** ** *** * * * consensus_10548#1 AGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTT--TCCATG 212 consensus_10548#4 AGAATATAGCATTGAATGTGTATATATACTTCTTTAGACGTCCACCTGTCTT--TCCATG 208 consensus_10548#3 AAAGAGCGGAAAAAAGCTGTTGAAGATATAGC--AAGGGCTTTGACTGCTCT--TC---G 210 consensus_10548#0 AAAGAGCGGAAAAAAGCTGTTGAAGATATAGC--AAGGGCTTTGACTGCTCT--TC---G 231 consensus_10548#2 AATGTGTCAGATTTGTATAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTA 209 * * * * * * * * consensus_10548#1 ATAGTTCTGTGTAGTTAAGTCC--TG-CATATTC---ATTCAGCCTGTTGGTTTTTCCCG 266 consensus_10548#4 ATAGTTCTGTGTAGTTAAGTCC--TG-CGAACCT---ATGAGG------GGATCCTCTAG 256 consensus_10548#3 GGAGCTGCTGACGGATAAGTCAGATA-CTCGATT---GACTGGCAAAGAACGTGATTCAG 266 consensus_10548#0 GGAGCTGCTGACGGATAAGTCAGATA-CTCGATT---GACTGGCAAAGAACGTGATTCAG 287 consensus_10548#2 GTCAGTACTCGTTCTTAGATCCTCTGACACGCTTCGTGTAATGATGGATAAATATTCTGT 269 * ** ** * * * * * consensus_10548#1 TTTTGTTTTCCACTTTTCCTGCTAGATTT-TCTGCA-TATTAAAGACTATTAGTTGCGGA 324 consensus_10548#4 AGTCGGCGGCGGACACA------------------------------------------- 273 consensus_10548#3 AATTATCGAACTCTGAACGAGCACGAATT-AATGAAATCATAACGGATGTAACTCATGAA 325 consensus_10548#0 AATTATCGAACTCTGAACGAGCACGAATT-AATGAAATCATAACGGATGTAACTCATGAA 346 consensus_10548#2 CAGTAATTATCTTTATGTTGCAAAGACTTGAATATTTTTAAGAAAACTGTATTATTTACC 329 consensus_10548#1 AGTGTCAGAGAAATTGGATTTCTTTTTTCGTAGTCTATGTAGAGTATTTTTGTTGGACTA 384 consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ATCATCAACCTCAATCTTTTGCCGCTTCTTGTAAACAATTTGGATGTCATCGAGTTTGAG 385 consensus_10548#0 ATCATCAACCTCAATCTTTTGCCGCTTCTTGTAAACAATTTGGATGTCATCGAGTTTGAG 406 consensus_10548#2 ATAAGCCATTTTCATGTATTATCTCATAACTTTACTGACAGGAGAAGAGTAATTTTTAAT 389 consensus_10548#1 ATAAAAATGTTTTTGATGTAAAAAATCATTATTCACTTACTATTTAACCTTTTTTGATAG 444 consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 GTATATGCTCTTTTGCCAGGCC-------------------------------------- 407 consensus_10548#0 AGTTCTAAACATATCGTTGATC---TTTTCGGCCATATTATGAGGCGACAGGTAGGATCT 463 consensus_10548#2 GCTTCTGTTTGGTGATATTCCTCATGTTGTATACTACACTTGTTACAGTTATTACCAT-- 447 consensus_10548#1 TATGTAGTAATAATAGAGTAATTGAATTCTGTTCTCTCTCTCCTAAACTGTTTCTTCCTC 504 consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TATAATCCTGCAGCTCAATATCTTTTGGCTAACTCTCAAATTTTAATATCTATCCTTCAA 523 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 CGATACGTATTTCTTTACATTACAGTACATTCAATAATTCTGAATCCCTATTTTCCTATC 564 consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 GGATACTCCAAACCTGACACTGCTATACACTATGGTGCAATGCTTCGGGATGCATGCCGA 583 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 TATGATTTTCTTTTTACTGTTAATATTATGATTGT------------------------- 599 consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 CATGAATCTTTAGCCAAAGTTGTTCTTCGTTCACCAGAATTTTATCAGTTATTTGAACAC 643 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 GTACAAGGCACAGCATTTGATGTGAGCTCAGATGCTTTCGCTACATTGAAAGATTTGCTT 703 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 ACTCGTCATAAGGCGCTTGTAGCAGATTTTCTAACAGCTAATTATGATGTCTTTTTCGAC 763 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 CATTATATGCATATGATTTTATCAGATAATTACGTCACAAAAAGGCAAGCATTAAAGTTG 823 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTAGGAGAGCTTTTACTTGATCGGCATAACATCTCAATAATGACCAAGTATATTGCAGAT 883 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 CCGGAAAACCTCAAAGTCATTATGAATATGTTGAAAAGTAAAGAAAAGCAAATTGCTTTT 943 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 GAAGCGTTTCATTGTTTTAAGGTGTTTGTTGCAAATCCAAACAAGCCACCAGCTGTTCAT 1003 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 ATGATTCTATTTCGTAATCAGGAAAAATTACTATCCTTTCTGACAGATTTTCAAACTGAA 1063 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 CGTACAGATGATGGTCAATTCAATGATGAAAAACAGTATTTGATCAAACAAATCAGAGAA 1123 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTAAAACCAGTGCCTATTTCGTCTAATCCAAATCCCACCTAATTGAGCTCAATTCCGCGT 1183 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TCTACCTAATAGAAATTTTTGGTCTTATTTCTTGTCTTTATTTAATGTGTCAGATTTGTA 1243 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TAAAATATGGTCTACGCCGTACATTCTTCAATTATAATATGTAGTCAGTACTCGTTCTTA 1303 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 GATCCTCTGACACGCTTTGTGTAATGATGGATAAATATTCTGTCAGTAATTATCTTTATG 1363 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTGCAAAGACTTGAATATTTTTGAGAAAACTGTATTATTTACCATAAGCCATTTTCATGT 1423 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 ATTATCTCATAACTTTACTGACAGGAGAAGAGTAATTTTTAATGCTTCTGTTTGGTGATA 1483 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTCCTCATGTTGTATACTACACTTGTTACAGTTATTACCATCATACATTGTTAATCCGAG 1543 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTATTGGCTATAAATAATTTTACAACTCTTTCCTCATACAATTTTCTGTTTTTTGCATAG 1603 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 AAATTTTTTCTTTATTTCATTCACTCGAATCATTTATTTTAGTTGTTCATTTGGATTAAT 1663 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 GAGGAATATTTTTTATCCGTATTCTGCAATATCTTAATTGGACAAATTAGCTGTATTTTG 1723 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 CAACTTTTTTTGTACAACTCTCAAATTTTGTAGAATATAGCATTGAATGTGTATATATAC 1783 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTCTTTAGACGTCCACCTGTCTTTCCATGATAGTTCTGTGTAGTTAAGTCCTGCATATCA 1843 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTCAGCCTGTTGGTTNTTCCCNGTTTGNTTNCACTTTNCTGCTAGATTTCTGCATATAAA 1903 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 GACTATAGNNTGNGAAGTGTCAGAAAATGGNATTCCTTTTTCGTANCTATNAGAGNATTN 1963 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 TTGTGGACTATAAAATGTTTTGAGTAAAATCATATNACTACTATTACCCCTTTGATGATG 2023 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ------------------------------------------------------------ consensus_10548#4 ------------------------------------------------------------ consensus_10548#3 ------------------------------------------------------------ consensus_10548#0 ANNATAAAGAGAATGGATCTGTCTCTCTTCTAACGTTTTTCCTCGACCGTTTTTTCCTTC 2083 consensus_10548#2 ------------------------------------------------------------ consensus_10548#1 ---- consensus_10548#4 ---- consensus_10548#3 ---- consensus_10548#0 AGGA 2087 consensus_10548#2 ---- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||