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Schistosoma mansoni
cluster # 10555 cluster # 10555       Sequences # 18       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10555#0 length = 752 sequences # 5  
consensus_10555#1 length = 726 sequences # 8  
consensus_10555#2 length = 378 sequences # 2  
consensus_10555#3 length = 345 sequences # 3  

consensusID : consensus_10555#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 752
fasta sequence
                              [GTGCAGGTTAGTCAACACTCAGTCAGCCACGTCGACCAGGAAATCACTTCCGTAGCAACTGTTGACTTCGTTACCACTCAGTGATGTTCCACCTTCTTTGGGAAGATAGTGCTTCCATACTGACGTGCTGCCAGTATATGTTTTTGTTGTTTTCTATTGCTGGAATGTCTAAAACTTACAATTCATGGTGTTACCAACTATGGAGCAAATCCACTTACCCTCGGGGATTTCCGTCTGCATCTGTTTCAAATGGTTGGACATTGGCGAGGAACGTAGTGGAATTCTCCGTTGTCTCGAGGTTCTGGTATTACCATAATCATGGGCAGGGAGGTTTCCTTAGTTTTTCTTTGTTTTGTGGGTGTGATTGGGTGTTGTCACATGAGAACACTTGATGCCTACCATATCATGTGTTCTGCAGAAACTTCTGCCAGAAGTATAACGGATAATTGAGCCTAAAGTTTTATATTGGTACTAACGGACCTGAACCATGCATATAATGAACTGAAGTTAAATTTCATTTCAATAATAAAATGGCAACAGTTTTGATGTTATTAAAGACTCACTAATTGACGCGTATTTTATTCCTCAAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTTACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATA]

[-] EMBL CD060360             [GTGCAGGTTAGTCAACACTCAGTCAGCCACGTCGACCAGGAAATCACTTCCGTAGCAACTGTTGACTTCGTTACCACTCAGTGATGTTCCACCTTCTTTGGGAAGATAGTGCTTCCATACTGACGTGCTGCCAGTATATGTTTTTGTTGTTTTCTATTGCTGGAATGTCTAAAACTTACAATTCATGGTGTTACCAACTATGGAGCAAATCCACTTACCCTCGGGGATTTCCGTCTGCATCTGTTTCAAATGGTTGGACATTGGCGAGGAACGTAGTGGAATTCTCCGTTGTCTCGAGGTTCTGGTATTACCATAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD142127             [                                                                                   ATGTTCCACCTTCTTTGGGAAGATAGTGCTTCCATACTGACGTGCTGCCAGTATATGTTTTTGTTGTTTTCTATTGCTGGAATGTCTAAAACTTATAATTCATGGTGTTACCAACTATGGAGCAAATCCACTTACTCTCGGGGATTTCTGTCTGCATCTGTTTCAAATGGTTGGACATTGGCGAGGAACGTAGTGGAATTCTCCGTTGTCTCGAGGTTCTGGTATTACCATAATCATGGGCAGGGAGGTTTCCTTAGTTTTTCTTTGTTTTGTGGGTGTGATTGGGTGTTGTCACATGAGAACACTTGATGCCTACCATATCATGTGTTCTGCAGAAACTTCTGCCAGAAGTATAACGGATAATTGAGCCTAAAGTTTTAT                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD142100             [                                                                                                                                                                                                                                                                                                                      CCATAATCATGGGCAGGGAGGTTTCCTTAGTTTTTCTTTGTTTTGTGGGTGTGATTGGGTGTTGTCACATGAGAACACTTGATGCCTACCATATCATGTGTTCTGCAGAAACTTCTGCCAGAAGTATAACGGATAATTGAGCCTAAAGTTTTATATTGGTACTAACGGACCTGAACCATGCATATAATGAACTGAAGTTAAACTTCATTTCAATAATAAAATGGCAACAGTTTTGATGTTATTAAAGACTCACTAATTGACGCGTATTTTATTCCTCAAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTTACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATA]
[-] EMBL CD142130             [                                                                                                                                                                                                                                                                                                                           ATCATGGGCAGGGAGGTTTCCTTAGTTTTTCTTTGTTTTGTGGGTGTGATTGGGTGTTGTCACATGAGAACACTTGATGCCTACCATATCATGTGTTCTGCAGAAACTTCTGCCAGAAGTATAACGGATAATTGAGCCTAAAGTTTTATATTGGTACTAACGGACCTGAACCATGCATATAATGAACTGAAGTTAAATTTCATTTCAATAATAAAATGGCAACAGTTTTGATGTTATTAAAGACTCACTAATTGACGCGTATTTTATTCCTCAAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTTACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATA]
[-] EMBL CD142141             [                                                                                                                                                                                                                                                                                                                                                                              GGGTGTTGTCACATGAGAACACTTGATGCCTACCATATCATGTGTTCTGCAGAAACTTCTGCCAGAAGTATAACGGATAATTGAGCCTAAAGTTTTATATTGGTACTAACGGACCTGAACCATGCATATAATGAACTGAAGTTAAATTTCATTTCAATAATAAAATGGCAACAGTTTTGATGTTATTAAAGACTCACTAATTGACGCGTATTTTATTCCTCAAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCGGTTACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATA]


>consensus_10555#0 GTGCAGGTTAGTCAACACTCAGTCAGCCACGTCGACCAGGAAATCACTTCCGTAGCAACT GTTGACTTCGTTACCACTCAGTGATGTTCCACCTTCTTTGGGAAGATAGTGCTTCCATAC TGACGTGCTGCCAGTATATGTTTTTGTTGTTTTCTATTGCTGGAATGTCTAAAACTTACA ATTCATGGTGTTACCAACTATGGAGCAAATCCACTTACCCTCGGGGATTTCCGTCTGCAT CTGTTTCAAATGGTTGGACATTGGCGAGGAACGTAGTGGAATTCTCCGTTGTCTCGAGGT TCTGGTATTACCATAATCATGGGCAGGGAGGTTTCCTTAGTTTTTCTTTGTTTTGTGGGT GTGATTGGGTGTTGTCACATGAGAACACTTGATGCCTACCATATCATGTGTTCTGCAGAA ACTTCTGCCAGAAGTATAACGGATAATTGAGCCTAAAGTTTTATATTGGTACTAACGGAC CTGAACCATGCATATAATGAACTGAAGTTAAATTTCATTTCAATAATAAAATGGCAACAG TTTTGATGTTATTAAAGACTCACTAATTGACGCGTATTTTATTCCTCAAGCTGTTGAAAC TGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTT CGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTTACTAA GGAAGAATTAGACGCACAGTTGGCTGCTTATA



consensusID : consensus_10555#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 726
fasta sequence
                              [AAGGTTCAAACTTGATAATGGACCAGAGTCTTGAAGATATTATCCAACAGAAGCGCATCAGAGTAACTAGAGGTAGAGGTCGTGGACGCG-GTCGCGGTGGCGAATCTTTGCGAG-GTGTCCGTC-GTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTG-CAACTAAAGCCAAAAATCACTACAATGGTGTACCCCTTGATGGACGTCCAATGGTCATTCAGTTGGTCGGTGCAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTAACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATAATGCCCAGCGCGCTTGATCCCTTCTCACAATCCCTTGTTTTTGGAGTAGACTCAACAAAGTCTGTCAACTCTCCAAATCTCTTG]

[+] EMBL AI975301             [AAGGTTCAAACTTGATAATGGACCAGAGTCTTGAAGATATTATCCAACAGAAGCGCATCAGAGTAACTAGAGGTAGAGGTCGTGGACGCG GTCGCGGTGGCGAATCTTTGCGAG GTGTCCGTC GTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTG CAACTAAAGCCAAAAATCACTACAATGGTGTACCCCTTGATGGACGTCCAATGGTCATTCAGTTGGTCGGTGCAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACC                                                                                                                                ]
[-] EMBL CD134255             [                                                                               TCGTGGACGCG GTCGCGGTGGCGAATCTTTGCGAG GTGTCCGTC GTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGATGCACATTTCAAACATGGACTTCGGTGTTAACAATGACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTGCCTAGTAACGCt                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD140404             [                                                                                CGTGAACGCGAATCGCGGTGGCGAATCTTTGCGAG GTGTCCGTC GTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGGCAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTG CAACTAAAGCCAAAAATCACTACAATGGTGTACCCCTTGATGGACGTCCAATGGTCATTCAGTTGGTCGGTGCAGCT                                                                                                                                                                                                                                                    ]
[+] EMBL CD140465             [                                                                                 GTGGACGCG GACGCGGTGGCGAATCTTTGCGAGTGTGTCCGTCAGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAACTTTGTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGT                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD134091             [                                                                                                                                                                                                                                                                        CAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTG CAACTAAAGCCAAAAATCACTACAATGGTGTACCCCTTGATGGACGTCCAATGGTCATTCAGTTGGTCGGTGCAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGNGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAAACTGCAG                                                                                                                           ]
[-] EMBL CD196646             [                                                                                                                                                                                                                                                                                      GGTGTTAACAATGACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTG CAACTAAAGCCAAAAATCACTACAATGGTGTACCCCTTGATGGACGTCCAATGGTCATTCAGTTGGTCGGTGCAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTAACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATAATGCCCAGCGCGCTTGATCCCTTCTCACAATCCCTTGTTTTTGGAGTAGACTCAACAAAGTCTGTCAAC               ]
[-] EMBL CD143505             [                                                                                                                                                                                                                                                                                                     GATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTG CAACTAAAGCCA                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD192818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GACGTCCAATGGTCATTCAGTTGGTCGGTGCAGCTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTTACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATAATGCCCAGCGCGCTTGATCCCTTCTCACAATCCCTTGTTTTTGGAGTAGACTCAACAAAGTCTGTCAACTCTCCAAATCTCTTG]


>consensus_10555#1 AAGGTTCAAACTTGATAATGGACCAGAGTCTTGAAGATATTATCCAACAGAAGCGCATCA GAGTAACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCC GTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAAT GGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAA ATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATG AACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTC GTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACCCTCTTAGTGCAACTAAAGCCAAAA ATCACTACAATGGTGTACCCCTTGATGGACGTCCAATGGTCATTCAGTTGGTCGGTGCAG CTGTTGAAACTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTC GTCGGGGTTTCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTG CAGTAACTAAGGAAGAATTAGACGCACAGTTGGCTGCTTATAATGCCCAGCGCGCTTGAT CCCTTCTCACAATCCCTTGTTTTTGGAGTAGACTCAACAAAGTCTGTCAACTCTCCAAAT CTCTTG



consensusID : consensus_10555#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 378
fasta sequence
                              [GNNGCCGCCATGGCGTGCCGCGGGNAATTCGATTGCACTGCCCTGTTACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAACTGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACC]

[+] EMBL CD134197             [GNNGCCGCCATGGCGTGCCGCGGGNAATTCGATTGCACTGCCCTGTTACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAACTGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACC]
[+] EMBL CD134224             [                                           TGTTACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGACCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAGAAGTCGTATTTGTGAACC]


>consensus_10555#2 GNNGCCGCCATGGCGTGCCGCGGGNAATTCGATTGCACTGCCCTGTTACTAGAGGTAGAG GTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGC GACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCC AAGATGGTCGTAGCCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACA TTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAACTGAACTTTTTCGGGAGTTTG GTGCAATTCGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCAG AAGTCGTATTTGTGAACC



consensusID : consensus_10555#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 345
fasta sequence
                              [TCGCGGCAACTATTCGTTCCGAGGTTGATAATGGACCAGAGTCTTGAAGATATTATCCAACAGAAGCGCATCAGAGTAACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAG-CCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAAC-TTTTTCGGGAGTTTGGTGCAATTCGGAAG]

[+] EMBL CD077874             [TCGCGGCAACTATTCGTTCCGAGGTTGATAATGGACCAGAGTCTTGAAGATATTATCCAACAGAAGCGCATCAGAGTAACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAG CCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATAAATGAAC TTTTTCGGGAGTTTGGTGCAATTCGGAAG]
[+] EMBL CD078173             [                        TTGATAATGGACCAGAGTCTTGAAGATATTATCCAACAGAAGCGCATCAGAGTAACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCTTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAG CCCCAAAGGATCTGTTAGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAATGACGATATANATGAACTTTTTTCGGGAGTTTGGTGC          ]
[+] EMBL CD134342             [                                                                                            TCGTGGACGCGGTCGCGGTGGCGAATCTTTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCCCTACCTGACAAATGGCAGCACGATATGTT CAAGATGGTCGTAGCCCCCAAAGGATCTGTTAGTACAGGTGGAAAT                                                                                           ]


>consensus_10555#3 TCGCGGCAACTATTCGTTCCGAGGTTGATAATGGACCAGAGTCTTGAAGATATTATCCAA CAGAAGCGCATCAGAGTAACTAGAGGTAGAGGTCGTGGACGCGGTCGCGGTGGCGAATCT TTGCGAGGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATTGTCACGAGCC TTACCTGACAAATGGCAGCACGATATGTTCCAAGATGGTCGTAGCCCCAAAGGATCTGTT AGTACAGGTGGAAATGCTACGAGGCTGCACATTTCAAACCTGGACTTCGGTGTTAACAAT GACGATATAAATGAACTTTTTCGGGAGTTTGGTGCAATTCGGAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10555#2      ------------------------------------------------------------
consensus_10555#3      -------------------------------------------------TCGCGGCAACT 11
consensus_10555#1      ------------------------------------------------------------
consensus_10555#0      GTGCAGGTTAGTCAACACTCAGTCAGCCACGTCGACCAGGAAATCACTTCCGTAGCAACT 60
                                                                                   

consensus_10555#2      -------------------GNNGCCGCCATGGCGTGCC-GCGGGNA--ATTCGATTGCAC 38
consensus_10555#3      ATTCGTTCCGA----GGTTGATAATGGACCAGAGTCTT-GAAGATATTATCCAACAGAAG 66
consensus_10555#1      --AAGGTTCAA----ACTTGATAATGGACCAGAGTCTT-GAAGATATTATCCAACAGAAG 53
consensus_10555#0      GTTGACTTCGTTACCACTCAGTGATGTTCCACCTTCTTTGGGAAGATAGTGCTTCCATAC 120
                                                *        *    *     *   * *      * 

consensus_10555#2      TGCCCT---GTTACTAGAGGTAGAGGTCGTGGAC-GCGGTCGCGGTGGCGAATCTTTGCG 94
consensus_10555#3      CGCATCAGAGTAACTAGAGGTAGAGGTCGTGGAC-GCGGTCGCGGTGGCGAATCTTTGCG 125
consensus_10555#1      CGCATCAGAGTAACTAGAGGTAGAGGTCGTGGAC-GCGGTCGCGGTGGCGAATCTTTGCG 112
consensus_10555#0      TGACGTGCTGCCAGTATATGTTTTTGTTGTTTTCTATTGCTGGAATGTCTAAAACTTACA 180
                        *       *  * ** * **    ** **   *    *  *   ** * **   ** * 

consensus_10555#2      A-----GGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATT--GTCACGAG 147
consensus_10555#3      A-----GGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATT--GTCACGAG 178
consensus_10555#1      A-----GGTGTCCGTCGTGGTGGAGTTGCGCGACGAAACACAAATGGATT--GTCACGAG 165
consensus_10555#0      ATTCATGGTGTTACCAACTATGGAGCAAATCCACTTACCCTCGGGGATTTCCGTCTGCAT 240
                       *     *****         *****     * **  * *      *  **  ***   * 

consensus_10555#2      CCTTACCTGACAAATGG----CAGCACGATATGTTCCAAGATGGTC-GTAGCCCCAAAGG 202
consensus_10555#3      CCTTACCTGACAAATGG----CAGCACGATATGTTCCAAGATGGTC-GTAGCCCCAAAGG 233
consensus_10555#1      CCTTACCTGACAAATGG----CAGCACGATATGTTCCAAGATGGTC-GTAGCCCCAAAGG 220
consensus_10555#0      CTGTTTCAAATGGTTGGACATTGGCGAGGAACGTAGTGGAATTCTCCGTTGTCTCGA-GG 299
                       *  *  *  *    ***      **  *  * **      **  ** ** * * * * **

consensus_10555#2      ATCTGTTAGTAC---------AGGTGGAAATGCTAC----GAGGCTGCACATTTCAAACC 249
consensus_10555#3      ATCTGTTAGTAC---------AGGTGGAAATGCTAC----GAGGCTGCACATTTCAAACC 280
consensus_10555#1      ATCTGTTAGTAC---------AGGTGGAAATGCTAC----GAGGCTGCACATTTCAAACC 267
consensus_10555#0      TTCTGGTATTACCATAATCATGGGCAGGGAGGTTTCCTTAGTTTTTCTTTGTTTTGTGGG 359
                        **** ** ***          **  *  * * * *    *    *     ***      

consensus_10555#2      TGGACTTCGGTGTTAACA-ATGACGATA-TAACTGA--ACTTTTTCGGGAGTTTGGTGCA 305
consensus_10555#3      TGGACTTCGGTGTTAACA-ATGACGATA-TAAATGA--ACTTTTTCGGGAGTTTGGTGCA 336
consensus_10555#1      TGGACTTCGGTGTTAACA-ATGACGATA-TAAATGA--ACTTTTTCGGGAGTTTGGTGCA 323
consensus_10555#0      TGTGATTGGGTGTTGTCACATGAGAACACTTGATGCCTACCATATCATGTGTTCTGCAGA 419
                       **   ** ******  ** ****  * * *   **   **  * **  * ***  *   *

consensus_10555#2      ATT------CGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCA 359
consensus_10555#3      ATT------CGGAAG--------------------------------------------- 345
consensus_10555#1      ATT------CGGAAGGCTACCGTCCATTATGACAGGAGCGGTCGTTCTCTTGGCACCGCA 377
consensus_10555#0      AACTTCTGCCAGAAGTATAACGGATAATTGAGCCTAAAGTTTTATATTGGTACTAACGGA 479
                       *        * ****                                             

consensus_10555#2      G--AAGTCGTATTTGT---GAACC------------------------------------ 378
consensus_10555#3      ------------------------------------------------------------
consensus_10555#1      G--AAGTCGTATTTGT---GAACCC---TCTTAGTGCAACTAAAGCCAAAAATCACTACA 429
consensus_10555#0      CCTGAACCATGCATATAATGAACTGAAGTTAAATTTCATTTCAATAATAAAATGGCAACA 539
                                                                                   

consensus_10555#2      ------------------------------------------------------------
consensus_10555#3      ------------------------------------------------------------
consensus_10555#1      ATGGTGTACCCCTTGATGGACGTCCAATGGTCATTCAGTTGGTCGGTGCAGCTGTTGAAA 489
consensus_10555#0      GTTTTGATGTTATTAAAGACTCACTAATTGACGCGTATTTTATTCCTCAAGCTGTTGAAA 599
                                                                                   

consensus_10555#2      ------------------------------------------------------------
consensus_10555#3      ------------------------------------------------------------
consensus_10555#1      CTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTT 549
consensus_10555#0      CTGCTGTAACATCACGTCCTCGTGTTACTCGCCCTCGTGGTTCACCGCTTCGTCGGGGTT 659
                                                                                   

consensus_10555#2      ------------------------------------------------------------
consensus_10555#3      ------------------------------------------------------------
consensus_10555#1      TCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTAACTA 609
consensus_10555#0      TCGGACGTGGTCGAGGTCGTGCACGTGGTCGCGGAAGAATTCAGAAACCTGCAGTTACTA 719
                                                                                   

consensus_10555#2      ------------------------------------------------------------
consensus_10555#3      ------------------------------------------------------------
consensus_10555#1      AGGAAGAATTAGACGCACAGTTGGCTGCTTATAATGCCCAGCGCGCTTGATCCCTTCTCA 669
consensus_10555#0      AGGAAGAATTAGACGCACAGTTGGCTGCTTATA--------------------------- 752
                                                                                   

consensus_10555#2      ---------------------------------------------------------
consensus_10555#3      ---------------------------------------------------------
consensus_10555#1      CAATCCCTTGTTTTTGGAGTAGACTCAACAAAGTCTGTCAACTCTCCAAATCTCTTG 726
consensus_10555#0      ---------------------------------------------------------
                                                                                




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)