cluster # 10580

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Schistosoma mansoni
cluster # 10580 cluster # 10580 Sequences # 18 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10580#0 length = 2218 sequences # 17

consensus_10580#1 length = 418 sequences # 1

consensusID : consensus_10580#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 2218
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTAAATTGCTGATAATTTATTCAGTTTTGAAGATAGAGGTATTGCTACATTATCATCGGACCTAGACATACAAGTAAAATTAAGAGAAAATTAGAAACTGTACAAAGGTGTAAGTTGAAACACCGTCTGTGCAAAACAATGAGAAATATGTCATTTCCGCTTTAAGCTTCTGGAGGCTGAGTCTGATGAATGCACTTTTTTTCTGGTTGGTGACGGAGTCCGAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGTGTCGTTTGCGGTTCGATTTGTGTGGAACATGCTTCTTCTTTGGAGTAATGGAATGGGACTGATTTGAAGTAAATGCTCCCGCGTCATCATCCTCAGTAGCTTCTCCTTCTTCTGCATCTTCTAAATGTGTTGAGTAGTCAATTTCATCTTCTGTCGAGTCAGGCTCCCAACCAGATGCAGATGTCCTCCGACGTTCGCTGGAGTTTCGTGAGTCCATTCGAATAGAAGGGCTATTATAAGTACTCCAGTCTCCAGGGCCCAGGCTACCAGAAGGAGAGGCATGACGTCGTCGAGGGCGATCACGATCACGGAATGAACGCGGAGGTGAACGATCCCTTGAATTCCTTCGTGTAGGGGAAGATGACATATCACGACCTCGTGACTGATATTTCGATTGATGAGGTGTCAGACCACTTTTCTCTTTAGTACATTTGGATGGTTTGGATTTGTTACGATGAACAGATTTATGTCCTTTTTTATGTACAGAATGTTCATTTTCTACTAGGCTTTCTAAAAGGCGCTCTCTATAACGTTGAATTTGCTTGTTTATAGCTTCATCCGTAATTGTTTTATCTCCTTTACGACTTGCCTCCAACTCATCTTGATACTTTAATACCTTGAGTTCAACCTCTCTCAAGATAGCGCGACGCTCTTCAGAAACAGGTGTTGTTGTCGAAGTACTACTAGGCGTTGAAGAAACATGAGAGGTTGAGGAAGTTACGCTAGTTGCACAAGGAATTTGAGAAACAGGTATAGGTGAAAGACTAGATTCACTGGCAACTGGACTAGCAGCATCTTCGTCATCATAAG-CCACAAGT-CCT-CCTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGACTGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGAACTAGCGGTTGGCCTTCCAGAACTTCGACATCCGGATTTAAAAATCCTACTTTTTTTGCTAAATCTTGATTTTGCTCATCTTCATCCAAATTTAATGGAACACCCGACAGGTCGGCTTCATAGTCAACAGCCTCTGACACCAACCCCAAGAATATATTCTGCAACTTGATGAGGAATTCATTCGGATATACGGCCCAATCTTCCCACGCACGGAAACAAAGCATGACTTTTTGCTTCAATTGTTCAGCTTTAAGTTTCCCCTCTACATTTTTATAATGCGAATTCAGGTTTTTGAACATATCTGGTAAGCAAGTTTCAAAACACTTTCGAAAGAAAGAAGCATTTGGAACTTTAGCTGATGAATTATATAGTATATCAGAAGCCAAGAACAAACGAGCGACCAATTTATTTATGCTTATAGATTGAGATTTCTCATGTTCTGTAGAACCCTGGTCGGATTTGAAGTCAGAGATAGGATTTTCATCGACTGAATTTATTTCTTTTTCCAAATGATTTGAAGTGAAATTCGAATTTGGAGCAACTGAATCAACTATACACAAGGCGATATCGGAGGCAGAATCCGCGTGTTCCAAACACCAAACCATAACCTCGCCTATTTTAATACGACAGGGTTTCAAGAATCCTCC]

[+] EMBL AI395774             [TTTTTTTTTTTTTTTTTTTTTAAATTGCTGATAATTTATTCAGTTTTGAAGATAGAGGTATTGCTACATTATCATCGGACCTAGACATACAAGTAAAATTAAGAGAAAATTAGAAACTGTACAAAGGTGTAAGTTGAAACACCGTCTGTGCAAAACAATGAGAAATATGTCATTTCCGCTTTAAGCTTCTGGAGGCTGAGTCTGATGAATGCACTTTTTTTCTGGTTGGTGACGGAGTCCGAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGTGTCGTTTGCGGTTCGATTTGTGTGGAACATGCTTCTTCTTTGGAGTAATGGAATGGGACTGATTTGAAGTAAATGCTCCCGCGTCATCATCCTCAGTAGCTTCTCCTTCTTCTGCATCTTCTAAATGTGTTGAGTAGTCAATTTCATCTTCTGTCGAGTCAGGCTCCCAACCAGATGCAAATGTCCTCCGACGTTCGCTGGGGTTTCGTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD135552             [                                                                                                  TTAAGAGAAAATTAGAAACTGTACAAAGGTGTAAGTTGAAACACCGTCTGTGCAAAACAATGAGAAATATGTCATTTCCGCTTTAAGCTTCTGGAGGCTGAGTCTGATGAATGCACTTTTTTTCTGGTTGGTGACGGAGTCCGAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGTGTCGTTTGCGGTTCGATTTGTGTGGAACATGCTTCTTCTTTGGAGTAATGGAATGGGACTGATTTGAAGTAAATGCTCCCGCGTCATCATCCTCATTAGCTTCTCCTTCTTCTGCATCTTCTAAATGTGTTGAGTAGTCAATTTCATCTTCTGTCGAGTCAGGCTCCCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD096783             [                                                                                                                                                                                                                    ACTTTTTTTCTGGTTGGTGACGGAGTCCGAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGTGTCGTTTGCGGTCCGATTTGTGTGGAACATGCTTCTTCTTTGGAGTAATGGAATGGGACTGATTTGAAGTAAATGCTCCCGCGTCATCATCCTCAGTAGCTTCTCCTTCTTCTGCATCTTCTAAATGTGTTGAGTAGTCAATTTCATCTTCTGTCGAGTCAGGCTCCCAACCAGATGCAGATGTCCTCCGACGTTCGCTGGAGTTTCGTGAGTCCATTCGAATAGAAGGGCTATTATAAGTACTCCAGTCTCCAGGGCCCAGGCTACCAGAAGGAGAGGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD189343             [                                                                                                                                                                                                                                                                                                                                                                                           GTCATCATCCTCAGTAGCTTCTCCTTCTTCTGCATCTTCTAAATGTGTTGAGTAGTCAATTTCATCTTCTGTCGAGACAGGCTCCCAACCAGATGCAGATGTCCTCCGACGTTCGCTGGAGTTTCGTGAGTCCATTCGAATAGAAGGGCTATTATAAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD118330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCTCCGACGTTCGCTGGAGTTTCGTGAGTCCATTCGAATAGAAGGGCTATTATAAGTACTCCAGTCTCCAGGACCCAGGCTACCAGAAGGAGAGGCATGACGTCGTCGAGGGCGATCACGATCACGGAATGAACGCGGAGGTGAACGATCCCTTGAATTCCTTCGTGTAGGGGAAGATGACATATCACGACCTCGTGACTGATATTTCGATTGATGAGGTGTCAGACCACTTTTCTCTTTAGTACATTTGGATGGTTTGGATTTGTTACGATGAACAGATTTATGTCCTTTTTTATGTACAGAATGTTCATTTTCTACTAGGCTTTCTAAAAGGCGCTCTCTATAACGTTGAATTTGCTTGTTTATAGCTTCATCCGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD091039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGGCATGACGTCGTCGAGGGCGATCACGATCACGGAATGAACGAGGAGGTGAACGATCCCTTGAATTCCTTCGTGTAGGGGAAGATGACATATCACGACCTCGTGACTGATATTTCGATTGATGAGGTGTCAGACCACTTTTCTCTTTAGTACATTTGGATGGTTTGGATTTGTTACGATGAACAGATTTATGTCCTTTTTTATGTACAGAATGTTCATTTTCTACTAGGCTTTCTAAAAGGCGCTCTCTATAACGTTGAATTTGCTTGTTTATAGCTTCATCCGTAATTGTTTTATCTCCTTTACGACTTGCCTCCAACTCATCTTGATACTTTAATACCTTGAGTTCAACCTCTCTCAAGATAGCGCGACGCTCTTCAGAAACAGGTGTTGTTGTCGAAGTACTACTAGGCGTTGAAGAAACATGAGAGGTTGAGGAAGTTACGCTAGTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD078085             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGAAACAGGTGTTGTTGTCGAAGTACTACTAGGCGTTGAAGAAACAAGAGAGGTTGAGGAAGTTACGGGAGTTGGACAAGGAATTTGAGAAACAGGTATAGGTGAAAGACTAGATTCACTGGCAACTGGACTAGCAGCATCTTCGTCATCATAAG CCACAAGT CCT CCTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGATGAAGCATTGTCGCTCCATCGACCTGTATCAAGTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD145177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CACTGGCAACTGGACTAGCAGCATCTTCGTCATCATAAG CCACAAGT CCT CCTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCTCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGACTGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD145370             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGCAACTGGACTAGCAGCATCTTCGTCATAATATGTCCACATGTGCCTAACTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAACTCTTAGGGCGGACTGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD145350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGCAACTGGACTAGCAGCATCTTCGTCATAATCTGTCCACAAGTGCCTAACTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGACTGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD145366             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGCAACTGGACTAGCAGCATCTTCGTCATCATAAG CCACAAGTGCCT ACTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTTTGAACGTTATCACTGGGCTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGACTGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD145241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGCAACTGGACTAGCAGCATCTTCGTCATCATAAG CCACAAGT CCT CCTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGAAGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTANGGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD148328             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGCAACTGGACTAGCAGCATCTTCGTCATCATAAG CCACAAGT CCT CCTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGACTGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD148365             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGCAACTGGACTAGCAGCATCTTCGTCATCATAAG CCACAAGT CCT CCTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAACTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCCGGTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTTCAGTAGTCTCAACAGTTTCCCGTTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGACTGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD187341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTAGCAGCATCTTCGTCATCATAAG CCACAAGT CCT CCTAAAATGGGTAATGGTTCTCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGTTCTGAAGGTGATTAGGTGTATTGTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD178448             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTCCATCATACTGAACTAGCGGTTGGCCTTCCAGAACTTCGACATCCGGATTTAAAAATCCTACTTTTTTTGCTAAATCTTGATTTTGCTCATCTTCATCCAAATTTAATGGAACACCCGACAGGTCGGCTTCATAGTCAACAGCCTCTGACACCAACCCCAAGAATATATTCTGCAACTTGATGAGGAATTCATTCGGATATACGGCCCAATCTTCCCACGCACGGAAACAAAGCATGACTTTTTGCTTCAATTGTTCAGCTTTAAGTTTCCCCTCTACATTTTTATAATGCGAATTCAGGTTTTTGAACATATCTGGTAAGCAAGTTTCAAAACACTTTCGAAAGAAAGAAGCATTTGGAACTTTAGCTGATGAATTATATAGTATATCAGAAGCCAAGAACAAACGAGCGACCAATTTATTTATGCTTA                                                                                                                                                                                                                                     ]
[+] EMBL CD168743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACAAAGCATGACTTTTTGCTTCAATTGTTCAGCTTTAAGTTTCCCCTCTACATTTTTATAATGCGAATTCAGGTTTTTGAACATATCTGGTAAGCAAGTTTCAAAACACTTTCGAAAGAAAGAAGCATTTGGAACTTTAGCTGATGAATTATATAGTATATCAGAAGCCAAGAACAAACGAGCGACCAATTTATTTATGCTTATAGATTGAGATTTCTCATGTTCTGTAGAACCCTGGTCGGATTTGAAGTCAGAGATAGGATTTTCATCGACTGAATTTATTTCTTTTTCCAAATGATTTGAAGTGAAATTCGAATTTGGAGCAACTGAATCAACTATACACAAGGCGATATCGGAGGCAGAATCCGCGTGTTCCAAACACCAAACCATAACCTCGCCTATTTTAATACGACAGGGTTTCAAGAATCCTCC]




>consensus_10580#0
TTTTTTTTTTTTTTTTTTTTTAAATTGCTGATAATTTATTCAGTTTTGAAGATAGAGGTA
TTGCTACATTATCATCGGACCTAGACATACAAGTAAAATTAAGAGAAAATTAGAAACTGT
ACAAAGGTGTAAGTTGAAACACCGTCTGTGCAAAACAATGAGAAATATGTCATTTCCGCT
TTAAGCTTCTGGAGGCTGAGTCTGATGAATGCACTTTTTTTCTGGTTGGTGACGGAGTCC
GAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGTGTC
GTTTGCGGTTCGATTTGTGTGGAACATGCTTCTTCTTTGGAGTAATGGAATGGGACTGAT
TTGAAGTAAATGCTCCCGCGTCATCATCCTCAGTAGCTTCTCCTTCTTCTGCATCTTCTA
AATGTGTTGAGTAGTCAATTTCATCTTCTGTCGAGTCAGGCTCCCAACCAGATGCAGATG
TCCTCCGACGTTCGCTGGAGTTTCGTGAGTCCATTCGAATAGAAGGGCTATTATAAGTAC
TCCAGTCTCCAGGGCCCAGGCTACCAGAAGGAGAGGCATGACGTCGTCGAGGGCGATCAC
GATCACGGAATGAACGCGGAGGTGAACGATCCCTTGAATTCCTTCGTGTAGGGGAAGATG
ACATATCACGACCTCGTGACTGATATTTCGATTGATGAGGTGTCAGACCACTTTTCTCTT
TAGTACATTTGGATGGTTTGGATTTGTTACGATGAACAGATTTATGTCCTTTTTTATGTA
CAGAATGTTCATTTTCTACTAGGCTTTCTAAAAGGCGCTCTCTATAACGTTGAATTTGCT
TGTTTATAGCTTCATCCGTAATTGTTTTATCTCCTTTACGACTTGCCTCCAACTCATCTT
GATACTTTAATACCTTGAGTTCAACCTCTCTCAAGATAGCGCGACGCTCTTCAGAAACAG
GTGTTGTTGTCGAAGTACTACTAGGCGTTGAAGAAACATGAGAGGTTGAGGAAGTTACGC
TAGTTGCACAAGGAATTTGAGAAACAGGTATAGGTGAAAGACTAGATTCACTGGCAACTG
GACTAGCAGCATCTTCGTCATCATAAGCCACAAGTCCTCCTAAAATGGGTAATGGTTCTC
CGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAGTG
GGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTGGT
TCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTCTT
TTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGGTT
CAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCCAG
ATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGACTG
GTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATCTC
CATCATACTGAACTAGCGGTTGGCCTTCCAGAACTTCGACATCCGGATTTAAAAATCCTA
CTTTTTTTGCTAAATCTTGATTTTGCTCATCTTCATCCAAATTTAATGGAACACCCGACA
GGTCGGCTTCATAGTCAACAGCCTCTGACACCAACCCCAAGAATATATTCTGCAACTTGA
TGAGGAATTCATTCGGATATACGGCCCAATCTTCCCACGCACGGAAACAAAGCATGACTT
TTTGCTTCAATTGTTCAGCTTTAAGTTTCCCCTCTACATTTTTATAATGCGAATTCAGGT
TTTTGAACATATCTGGTAAGCAAGTTTCAAAACACTTTCGAAAGAAAGAAGCATTTGGAA
CTTTAGCTGATGAATTATATAGTATATCAGAAGCCAAGAACAAACGAGCGACCAATTTAT
TTATGCTTATAGATTGAGATTTCTCATGTTCTGTAGAACCCTGGTCGGATTTGAAGTCAG
AGATAGGATTTTCATCGACTGAATTTATTTCTTTTTCCAAATGATTTGAAGTGAAATTCG
AATTTGGAGCAACTGAATCAACTATACACAAGGCGATATCGGAGGCAGAATCCGCGTGTT
CCAAACACCAAACCATAACCTCGCCTATTTTAATACGACAGGGTTTCAAGAATCCTCC

consensusID : consensus_10580#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 418
fasta sequence

                              [CTGATGAATGCACTTTTTATCTGGTTGGTGACGGAGTCCGAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGGGTCGTTTGCGGTTCTGTAAAAGAAAAACAAGATAAAATTATTAAAGACCAAAAGTTCCTTAACATAATTAAAAATATAGCTGATGATCCACTTTCAAGTGAAGGATAATCAGACACTTAGCGATACTCTCTTTACTATAAATAAGGTTTAATGCTAAAAAAGATAAAATTTTGCAGCTGCAACTTAAACATAATCATAATTAGCCGTGCGATATTTTTTATGGGCTTATTATCCAAACTATATTACTGAAGAATGTGAAGACTATTGAGATCTAATTCCTTAATGTATTGTGTGCCTATCTACCTGGGTAGTATCACAGCCC]

[+] EMBL CD187639             [CTGATGAATGCACTTTTTATCTGGTTGGTGACGGAGTCCGAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGGGTCGTTTGCGGTTCTGTAAAAGAAAAACAAGATAAAATTATTAAAGACCAAAAGTTCCTTAACATAATTAAAAATATAGCTGATGATCCACTTTCAAGTGAAGGATAATCAGACACTTAGCGATACTCTCTTTACTATAAATAAGGTTTAATGCTAAAAAAGATAAAATTTTGCAGCTGCAACTTAAACATAATCATAATTAGCCGTGCGATATTTTTTATGGGCTTATTATCCAAACTATATTACTGAAGAATGTGAAGACTATTGAGATCTAATTCCTTAATGTATTGTGTGCCTATCTACCTGGGTAGTATCACAGCCC]




>consensus_10580#1
CTGATGAATGCACTTTTTATCTGGTTGGTGACGGAGTCCGAGAACGATGAGAATGGCGAT
TATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGGGTCGTTTGCGGTTCTGTAAAAGAA
AAACAAGATAAAATTATTAAAGACCAAAAGTTCCTTAACATAATTAAAAATATAGCTGAT
GATCCACTTTCAAGTGAAGGATAATCAGACACTTAGCGATACTCTCTTTACTATAAATAA
GGTTTAATGCTAAAAAAGATAAAATTTTGCAGCTGCAACTTAAACATAATCATAATTAGC
CGTGCGATATTTTTTATGGGCTTATTATCCAAACTATATTACTGAAGAATGTGAAGACTA
TTGAGATCTAATTCCTTAATGTATTGTGTGCCTATCTACCTGGGTAGTATCACAGCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10580#0      TTTTTTTTTTTTTTTTTTTTTAAATTGCTGATAATTTATTCAGTTTTGAAGATAGAGGTA 60
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TTGCTACATTATCATCGGACCTAGACATACAAGTAAAATTAAGAGAAAATTAGAAACTGT 120
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      ACAAAGGTGTAAGTTGAAACACCGTCTGTGCAAAACAATGAGAAATATGTCATTTCCGCT 180
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TTAAGCTTCTGGAGGCTGAGTCTGATGAATGCACTTTTTTTCTGGTTGGTGACGGAGTCC 240
consensus_10580#1      ---------------------CTGATGAATGCACTTTTTATCTGGTTGGTGACGGAGTCC 39
                                            ****************** ********************

consensus_10580#0      GAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGTGTC 300
consensus_10580#1      GAGAACGATGAGAATGGCGATTATGAGCTGCTACTGGGTCTGGACTTCGTGAACGGGGTC 99
                       ******************************************************** ***

consensus_10580#0      GTTTGCGGTTCGATTTGTGTGGAACATGCTTCTTCTTTGGAGTAATGGAATGGGACTGAT 360
consensus_10580#1      GTTTGCGGTTC------TGTAAAA---------------GAAAAACAAGATAAAATTATT 138
                       ***********      ***  **               **  **    **   * *  *

consensus_10580#0      TTGAAGTAAATGCTCCCGCGTCATCATCCTCAGTAGCTTCTCCTTCTTCTGCATCTTCTA 420
consensus_10580#1      AAAGACCAAAAGTTCC----TTAACATAATTAA-AAATATAGCTGATGATCCACTTTCAA 193
                           *  *** * ***    * * ***  * *  *  *    **  *  * **  *** *

consensus_10580#0      AATGTGTTGAGTAGTCAATTTCATCTTCTGTCGAGTCAGGCTCCCAACCAGATGCA-GAT 479
consensus_10580#1      ---GTGAAGGATAATCAGACAC-----TTAGCGA--TACTCTCTTTACTATAAATAAGGT 243
                          ***  *  ** ***    *      *  ***   *  ***   ** * *   * * *

consensus_10580#0      GTCCTCCGACGTTCGCTGGAGTTTCGTGAGTCCA-TTCGAATAGAAGGGCTATTATAAGT 538
consensus_10580#1      TTAATGCTAAAAAAGATAAAATTTTGCAGCTGCAACTTAAACATAATCATAATTAGCCGT 303
                        *  * * *     * *  * *** *    * **  *  ** * **     ****   **

consensus_10580#0      ACTCCAGTCTCCAGGGCCCAGGCTACCAGAAGGAGAGGCATGACGTCGTCGAGGGCGATC 598
consensus_10580#1      GCGATATTTTTTATGGGCTTATTATCCAAA----------CTATATTACTGAAGAATGTG 353
                        *   * * *  * ** *       *** *            *  *    ** *    * 

consensus_10580#0      ACGATCACGGAATGAACGCGGAGGTGAACGATCCCTTGAATTCCTTCGTGTAGGGGAAGA 658
consensus_10580#1      AAGACTATTGAG-----ATCTAATTCCTTAATGTATTGTGTGCCTATCTACCTGGGTAG- 407
                       * **  *  **          *  *     **   ***  * ***   *    *** ** 

consensus_10580#0      TGACATATCACGACCTCGTGACTGATATTTCGATTGATGAGGTGTCAGACCACTTTTCTC 718
consensus_10580#1      -----TATCACAGCCC-------------------------------------------- 418
                            ******  **                                             

consensus_10580#0      TTTAGTACATTTGGATGGTTTGGATTTGTTACGATGAACAGATTTATGTCCTTTTTTATG 778
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TACAGAATGTTCATTTTCTACTAGGCTTTCTAAAAGGCGCTCTCTATAACGTTGAATTTG 838
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      CTTGTTTATAGCTTCATCCGTAATTGTTTTATCTCCTTTACGACTTGCCTCCAACTCATC 898
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TTGATACTTTAATACCTTGAGTTCAACCTCTCTCAAGATAGCGCGACGCTCTTCAGAAAC 958
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      AGGTGTTGTTGTCGAAGTACTACTAGGCGTTGAAGAAACATGAGAGGTTGAGGAAGTTAC 1018
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      GCTAGTTGCACAAGGAATTTGAGAAACAGGTATAGGTGAAAGACTAGATTCACTGGCAAC 1078
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TGGACTAGCAGCATCTTCGTCATCATAAGCCACAAGTCCTCCTAAAATGGGTAATGGTTC 1138
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TCCGTCTACATCATCATCTTTATTTGTTGAAGCATTGTCACTCCATCGACTTGTATCAAG 1198
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TGGGATTCCATTAACTAATTCAGAAGGAAGAAATGCTCCCTTATTTAAACCATTCGGCTG 1258
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      GTTCTGAAGGTGATTAGGTGTATTTTGAATGTTATCACTGGACTTGCTGATAGGTTGGTC 1318
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TTTTTTCATATCTAAAGTGGAGGCGGATTCCCATATACTTGCGACCGTTAATGTCTCCGG 1378
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TTCAGTAGTCTCAACAGTTTCCCATTTGCTTGGAACAAATAAACGATTAGAGGTATCCCC 1438
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      AGATGGTTTTACTTCATCCTCCGTTGCAGGTGCACTGAACTGAGAATTCTTAGGGCGGAC 1498
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TGGTGAAGGAGACCGATCGTCTTCATTATCTAAAGGACTACCATCAACATCTAAGGGATC 1558
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TCCATCATACTGAACTAGCGGTTGGCCTTCCAGAACTTCGACATCCGGATTTAAAAATCC 1618
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TACTTTTTTTGCTAAATCTTGATTTTGCTCATCTTCATCCAAATTTAATGGAACACCCGA 1678
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      CAGGTCGGCTTCATAGTCAACAGCCTCTGACACCAACCCCAAGAATATATTCTGCAACTT 1738
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      GATGAGGAATTCATTCGGATATACGGCCCAATCTTCCCACGCACGGAAACAAAGCATGAC 1798
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TTTTTGCTTCAATTGTTCAGCTTTAAGTTTCCCCTCTACATTTTTATAATGCGAATTCAG 1858
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      GTTTTTGAACATATCTGGTAAGCAAGTTTCAAAACACTTTCGAAAGAAAGAAGCATTTGG 1918
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      AACTTTAGCTGATGAATTATATAGTATATCAGAAGCCAAGAACAAACGAGCGACCAATTT 1978
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      ATTTATGCTTATAGATTGAGATTTCTCATGTTCTGTAGAACCCTGGTCGGATTTGAAGTC 2038
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      AGAGATAGGATTTTCATCGACTGAATTTATTTCTTTTTCCAAATGATTTGAAGTGAAATT 2098
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      CGAATTTGGAGCAACTGAATCAACTATACACAAGGCGATATCGGAGGCAGAATCCGCGTG 2158
consensus_10580#1      ------------------------------------------------------------
                                                                                   

consensus_10580#0      TTCCAAACACCAAACCATAACCTCGCCTATTTTAATACGACAGGGTTTCAAGAATCCTCC 2218
consensus_10580#1      ------------------------------------------------------------