These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10590#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 428 fasta sequence [ATCATGGAGCA-CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG-CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATCCC] [+] EMBL CD069903 [ATCTTTGATCA CCGCGAAAGCGCACGATCCCAGGACTTTGCCCATGACGTCAGAACCGGGAGCG CCTACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069898 [ TCATTGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069840 [ TCATTGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCATGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069838 [ TCTTGGAGCA CCGCGAAAGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCTACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069915 [ TCATTTAGCA CCGCGATAGCGCATGATCCCACGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGCGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCATATGCTCAAGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069846 [ TCTTTGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAAGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAAGCGTGCTGCTGGGGAGACATTTTCGTCGCTCATACATCGATC ] [-] EMBL CD069905 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACAT AATCCC] [-] EMBL CD069928 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCATCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCTTCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATC ATACC] [-] EMBL CD069916 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCAATCC ] [-] EMBL CD069828 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGCCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCGTCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCAATCC ] [-] EMBL CD069797 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCAAACC ] [-] EMBL CD069811 [ CACGGAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGGCGGCATTGGGCTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATCC ] [+] EMBL CD069856 [ ttATTGAGCA CCGCNGAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGCTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069894 [ tctcGGAGCA CCGCGAAAGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGGGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [-] EMBL CD069832 [ cacGAGCACCCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAG ACCCGGAGCGNCCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCA TGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCGGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATCC ] [+] EMBL CD069866 [ ttAGCA CCGCGAAGGCGCACGATCCCAGGACCTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAAGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069864 [ tctgngaCA CCGCGAA GCGCACGATCCCAGNA CTTGCCCATGACGTCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCGACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGGCTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] [+] EMBL CD069896 [ GCACGACCCCAGNACCTNGCCCATGACGNCAGAACCGGGAGCG CCCACCACCATAAGCTCCGCGCGAATATCGCTGCTGGTGCCGTCAACGAGGGCGACGGCATTGGGTTCAGCGTGCAGACTCACCGTCAACCAGGTCGACCAACCCGGCGCGGGCGCATCAGCAAAAGCCAGAACATCGATGCGCACCTCTTCGGCGGCGTCTACCATGCCATCCGCACGGGGTGTACCACCGACCGCCTCGACTACGGCCTGAGCAACCTGAGGGCCGGTTGAAGGCATCTGCGTTGGCTCGGCCAGATGCTCAGGCAGGTCTTGTGGGTCCAGCGGTCGCTCAGCCGTTAGCTCATCACCGTCAGGAAGGCGTGCTGCTGGGGAGACGTTTTCGTCGCTCATACATCGATC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||