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Schistosoma mansoni
cluster # 10600 cluster # 10600       Sequences # 18       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10600#0 length = 2174 sequences # 15  
 consensus_10600#1 length = 925 sequences # 3  
consensusID : consensus_10600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 2174
fasta sequence 
                              [CCCACAGGTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGCATTTCAGTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGAAGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGAATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCACACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTTGCCGGGCGGGAGTTCCTCCGGTGAAGCTGTATTATTGGCACAGTGTGGTTCTCCTGTAGGTATCGGCACAG-ATATTGCTGGTAGTATCCGAATACCCTGTGCATTTTGCAATTTAGCTGGCTTGAAACCAACGTCTGGGAGACTTAGTCTATTACGTATTGTGTCGACCGCCAAGAAATCAGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTACCTTGTGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGATGAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTATAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACG-ATTTGCAAAAGCTTGGAATGAAGCAGG--CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGT-CGTAATTTCAG-AGAATATTTCTACCTTTTCTTAT-CGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG-TTATG-TTTTGATATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCCTCATTTTTATTGATAACTGACATTTATTTTTTTTGGTCTTTTAGTTTTCGTTACTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTACTTATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CD192017             [CCCACAGGTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCATATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL SMAMIDASE            [       GTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGCATTTCAGTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGAAGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGAATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCACACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTTGCCGGGCGGGAGTTCCTCCGGTGAAGCTGTATTATTGGCACAGTGTGGTTCTCCTGTAGGTATCGGCACAG ATATTGCTGGTAGTATCCGAATACCCTGTGCATTTTGCAATTTAGCTGGCTTGAAACCAACGTCTGGGAGACTTAGTCTATTACGTATTGTGTCGACCGCCAAGAAATCAGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTACCTTGTGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGATGAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTATAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACG ATTTGCAAAAGCTTGGAATGAAGCAGG  CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGTCCGTAATTTCAGAAGAATATTTCTACCTTTTCTTATCCGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTGTTTATGTTTTTGAAATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCCTCATTTTTATTGATAACTGACATTTATTTTTTTTGGTCTTTTAGTTTTCGTTCCTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCCAAAATACCGTACTTATTAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CD132189             [                                           GTTGATTCTGTGCTCAAAGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGCGTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCAGAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGCTTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BF936133             [                                                                                                                                                                                                                                                TTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTATCTTTGTGAACAAATCAAGAAGAAAAGAATGAACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD067308             [                                                                                                                                                                                                                                                                                                                                         TGACCCCCGTGGATGTCCTACATGCATTTCAGTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGAAGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGAATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD113607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGGATCGCGATACGTGGCTATGATGCCACTATGGGCATCATAAAGCGATGTAGTCAGCCTATACATGAGGACTGTGTGCTCATCAAGGTACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCACACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTTGCCGGGCGGGAGTTCTTAGGGTGAAGCTGTATTATTGGCACAGTGTGGCTATCCTGTAGGTTTCGGCACAGCATATTGCTGGGAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD188084             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTAGCTTGTGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGATGAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTATAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD167982             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAATCGGTTATTATAGTAACTTCGATGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTACAAAGCCTTTATACTTGGTTTGCGTGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATCCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD111638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACACGGNGAACCACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD111648             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACACGGNGAACCACTTAGCCCGCATATTAAACCCATCAATACTATTACTGNTATTCCAGACATTTTGAAACCCATcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD132494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGAGAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCATCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD072828             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGTAAAGTTCACAGCTCCTCATCCTTATAAAGCCTTTATACTTGGATTGCATGCGTTGCTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGANATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTtcccagc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AI882637             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ggc  CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCTATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAA CGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTC CTTTACAAACTGAGT CGTAATTTCAG AGAATATTTCTACCTTTTCTTAT CGTGTTTCCTCGGTA TTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG TTATG TTTTGATA TAGCTTTTG ACTTAGTCCTCCTGTATT AGATCGAGGGTTAATG TCCGTATTCCTCATTTTTA TGA AACTGAC TTTA  TTTTTGGGTC TTGAG TTGCGCTAC GGGA AAATGTCGCCG TGA TTTCATggag                                                                                  ]
[-] EMBL CD076335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGT CGTAATTTCAG AGAATATTTCTACCTTTTCTTAT CGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG TTATG TTTTGATATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCTTCATTTTTATTGATAACTGACATTTATTTTTTTTGGTCTTTTAGTTTTCGTTACTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTA                                      ]
[-] EMBL BF936118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAATTGAGT GGTAATTTCAG AGAATATTTCTACCTTTTCTTAT GGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTTCTCTACTAGCATTTTG TTATG TTTTGATATTAGCTTTTGTACTTAGTCCTTCTGTATTAAGATCGATGGTTAATGTTCTGTATTCTTCATTTTTATTGATAACTGACATTTA TTTTTTTGGTCTTTTAGTTTTCGAGACTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTg                                      ]




>consensus_10600#0
CCCACAGGTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAA
AGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGC
GTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCA
GAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGC
TTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTA
TCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGCATTTCA
GTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGA
AGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGA
ATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCAC
TATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGT
ACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCAC
ACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTT
GCCGGGCGGGAGTTCCTCCGGTGAAGCTGTATTATTGGCACAGTGTGGTTCTCCTGTAGG
TATCGGCACAGATATTGCTGGTAGTATCCGAATACCCTGTGCATTTTGCAATTTAGCTGG
CTTGAAACCAACGTCTGGGAGACTTAGTCTATTACGTATTGTGTCGACCGCCAAGAAATC
AGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTACCTTG
TGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGAT
GAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTA
TAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGA
GAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCA
TCCTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACT
CCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTAC
TGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAA
ACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTT
AATTTCTGAAATTAAAGCTTACCGATACGATTTGCAAAAGCTTGGAATGAAGCAGGCACT
GGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAAT
ATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGG
AGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGA
ATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGG
AGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCT
TCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGTCGTAATTTCAGAG
AATATTTCTACCTTTTCTTATCGTGTTTCCTCTGTATTTAATTTTATGTCGCCTTTGTTT
CTCTACTAGCATTTTGTTATGTTTTGATATTAGCTTTTGTACTTAGTCCTTCTGTATTAA
GATCGATGGTTAATGTTCTGTATTCCTCATTTTTATTGATAACTGACATTTATTTTTTTT
GGTCTTTTAGTTTTCGTTACTGTGATAATTGTGTCTGTTGATTTTCATTGTAGATTTTAG
CAGATGATTCCATCATCTTTAACCAAAAATACCGTACTTATTAATAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA

consensusID : consensus_10600#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 925
fasta sequence 
                              [CTCCGAGGCCAANAATTCGGCACGAGGCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAATTGGAAAGTGGTTCCTCTTTACACCGGAGTCGTATTTCGGAGAATATTCTACCTTTCCTTAGCGTGTTCCCTCTGTATTAATTTTAGTGTCGCCTTGTGTCTCTCACTAGCATTGTGTTATGTTGCGATATGAGCTTGTGTACTAAGCCCTTCTGTATAAAGATCGATGGTTAATGTCTGTATTCTCATTTATAGTGATAGTGACTTTATTTTGTGCTCTATATTCGTCGTCACGAATATTGCGCGGAGTCTCTGGTAGTTGCAGCAGTGCTCATCATCTA]

[+] EMBL CD082745             [CTCCGAGGCCAANAATTCGGCACGAGGCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGC                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD067413             [                                                GTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGGGCCACTGGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AW146480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGAT GGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGT AACCGTATCATGTAGAGACGGTCCTCGGAGTTATGCGTGAATTGGAAAGTGGTTCCTCTTTACACCGGAGTCGTATTTCGGAGAATATTCTACCTTTCCTTAGCGTGTTCCCTCTGTATTAATTTTAGTGTCGCCTTGTGTCTCTCACTAGCATTGTGTTATGTTGCGATATGAGCTTGTGTACTAAGCCCTTCTGTATAAAGATCGATGGTTAATGTCTGTATTCTCATTTATAGTGATAGTGACTTTATTTTGTGCTCTATATTCGTCGTCACGAATATTGCGCGGAGTCTCTGGTAGTTGCAGCAGTGCTCATCATCTA]




>consensus_10600#1
CTCCGAGGCCAANAATTCGGCACGAGGCTTACAAAGCCTTTATACTTGGTTTGCATGCGT
TGTTTGCAGATGGTGGTCAGGAACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGC
ATATTAAACTCATCAATACTATTACTGTAATTCCAGACATTTTGAAACCCATTGTCGAAT
TCATTTCTAAACATTTTATTGGCAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTG
CCAGTGGTCAAGCAGCAGTTAATTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTG
CAAAAGCTTGGAATGAAGCAGGGCCACTGGATGCATTAATATGTCCTGTATTTCCTTATC
CCGCACCACCAAAAGATGCCCCGCAAATATATATATCTCCATCCATTATCTACACTTTTT
TGTATAACATTCTAGACTATCCTGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACG
ATGTTCGCAATTCATTAATAAAATCCGAATCACTATATTCTTCTGGTGATTTTTACATGT
CCAAAGTATACAAACTATTAGATGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTG
GTAAACCGTATCATGAAGAGACCGTTCTTCGAGTTATGCGTGAATTGGAAAGTGGTTCCT
CTTTACACCGGAGTCGTATTTCGGAGAATATTCTACCTTTCCTTAGCGTGTTCCCTCTGT
ATTAATTTTAGTGTCGCCTTGTGTCTCTCACTAGCATTGTGTTATGTTGCGATATGAGCT
TGTGTACTAAGCCCTTCTGTATAAAGATCGATGGTTAATGTCTGTATTCTCATTTATAGT
GATAGTGACTTTATTTTGTGCTCTATATTCGTCGTCACGAATATTGCGCGGAGTCTCTGG
TAGTTGCAGCAGTGCTCATCATCTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10600#0      CCCACAGGTTATGGTCTCGCCGGTTGAGATGTCAAATTCAGCAGTTGATTCTGTGCTCAA 60
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      AGTATGGAAAGAGTATTTCGTCTTACTGGTGAGACACCCAGTTAGACATATACTAGTGGC 120
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      GTGTAGTCTTGGATTAGTATCATGGAAAATAATAACTAGTATTCGTACATATCAGAATCA 180
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      GAAACTGTTAAAATCAAAACAGATGCGTGTTACTGATAACATGGAGAAAATGAGAGAAGC 240
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      TTTGACCAAATTAACTCAACCATCTGTGCCAATGACTATCTGTAGTGAGAATTTATCTTA 300
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      TCTTTGTGAACAAATCAAGAAGAAGAGAATGACCCCCGTGGATGTCCTACATGCATTTCA 360
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      GTTCAGAGCACTACAGTTGCAGGATAACAATAATTCAGGCATTGCTCTGTTCATTTTAGA 420
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      AGCAGAAGAATGCGCTGCTAACTTGATGAAATTCCCAATGAACATCGACAAAGACTCCGA 480
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      ATTATACGGAATCCCCATCAGCATAAAGGAAGGGATCGCGATACGTGGCTATGATGCCAC 540
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      TATGGGCATCATAAAGCGATGTAATCAGCCTATAGATGAGGACTGTGTGCTCATCAAGGT 600
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      ACTGAAAAGTGTTGGTGCAATCCCTTTTGTGACCACCGTGACAACTCAGTTATGTCGCAC 660
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      ACTGGATGGCTTTCATGTTATTTATAATGATGCGGAAAATCCATTCAATAAGTCCAGGTT 720
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      GCCGGGCGGGAGTTCCTCCGGTGAAGCTGTATTATTGGCACAGTGTGGTTCTCCTGTAGG 780
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      TATCGGCACAGATATTGCTGGTAGTATCCGAATACCCTGTGCATTTTGCAATTTAGCTGG 840
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      CTTGAAACCAACGTCTGGGAGACTTAGTCTATTACGTATTGTGTCGACCGCCAAGAAATC 900
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      AGTATTATATATATCGCCTTGCCTAGGGCCTATGGCTAGAAAGGTGGACGATTTACCTTG 960
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      TGTAATGCGTGCGTTGCTGTGCCCTACAATGTTTGATTTAGATCCGTATGTTATACCGAT 1020
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      GAGCTTTGACCAAGTGTCTTATGAGGGGAAGAACAGAAGTCAGTTAGTAATCGGTTATTA 1080
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      TAGTAACTTCGACGACCCAAATCTCATTCAGGTCTTGGACGTGAATCAGCGAGTTGTGGA 1140
consensus_10600#1      ------------------------------------------------------------
                                                                                   

consensus_10600#0      GAAAGCAGCCAAAGCATTAGAAAGTGCTGGACATCGACTTGTAAAGTTCACAGTTCCTCA 1200
consensus_10600#1      --------------------------------------CTCCGAGGCCAANAATTCGGCA 22
                                                              *   * *   * * ***  **

consensus_10600#0      TC---CTTATAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGA 1257
consensus_10600#1      CGAGGCTTACAAAGCCTTTATACTTGGTTTGCATGCGTTGTTTGCAGATGGTGGTCAGGA 82
                            **** **************************************************

consensus_10600#0      ACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTAT 1317
consensus_10600#1      ACTCCGAAGTCATCTACAAGGGGAACCACTTAGCCCGCATATTAAACTCATCAATACTAT 142
                       ************************************************************

consensus_10600#0      TACTGTAATTCCAGACATTTTGAAACCCATTGTTGAATTCATTTCTAAACATTTTATTGG 1377
consensus_10600#1      TACTGTAATTCCAGACATTTTGAAACCCATTGTCGAATTCATTTCTAAACATTTTATTGG 202
                       ********************************* **************************

consensus_10600#0      CAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAA 1437
consensus_10600#1      CAAACCGGTCTGTCCGTTAGGTGCATTCCAGAAACTTGCCAGTGGTCAAGCAGCAGTTAA 262
                       ************************************************************

consensus_10600#0      TTTAATTTCTGAAATTAAAGCTTACCGATACGA-TTTGCAAAAGCTTGGAATGAAGCAGG 1496
consensus_10600#1      TTTAATTTCTGAAATTAAAGCTTACCGATACGAATTTGCAAAAGCTTGGAATGAAGCAGG 322
                       ********************************* **************************

consensus_10600#0      --CACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCC 1554
consensus_10600#1      GCCACTGGATGCATTAATATGTCCTGTATTTCCTTATCCCGCACCACCAAAAGATGCCCC 382
                         **********************************************************

consensus_10600#0      GCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCC 1614
consensus_10600#1      GCAAATATATATATCTCCATCCATTATCTACACTTTTTTGTATAACATTCTAGACTATCC 442
                       ************************************************************

consensus_10600#0      TGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAA 1674
consensus_10600#1      TGCTGGAGCTGTCCCAGCTGGCTTTGTCACTGAAGACGATGTTCGCAATTCATTAATAAA 502
                       ************************************************************

consensus_10600#0      ATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGA 1734
consensus_10600#1      ATCCGAATCACTATATTCTTCTGGTGATTTTTACATGTCCAAAGTATACAAACTATTAGA 562
                       ************************************************************

consensus_10600#0      TGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGAC 1794
consensus_10600#1      TGGGGGAGAAAACCTACCACTGTCTATTCAGGTGGTTGGTAAACCGTATCATGAAGAGAC 622
                       ************************************************************

consensus_10600#0      CGTTCTTCGAGTTATGCGTGAAATAGAAAGTTGTTTCTCTTTACAAACTGAGTCGTAATT 1854
consensus_10600#1      CGTTCTTCGAGTTATGCGTGAATTGGAAAGTGGTTCCTCTTTACAC-CGGAGTCGTA-TT 680
                       ********************** * ****** *** *********  * ******** **

consensus_10600#0      TCAGAGAATATTTCTACCTTTTCTTATCGTGTTTCCTCTGTATTTAATTTTATGTCGCCT 1914
consensus_10600#1      TCGGAGAATATT-CTACCTTTCCTTAGCGTGTTCCCTCTGTATTAATTTTAGTGTCGCCT 739
                       ** ********* ******** **** ****** ********** * ***  ********

consensus_10600#0      T-TGTTTCTCTACTAGCATTTTGTTATGTTTTGATATTAGCTTTTGTACTTAGTCCTTCT 1973
consensus_10600#1      TGTGTCTCTC-ACTAGCATTGTGTTATGTTGCGATATGAGCTTGTGTACTAAGCCCTTCT 798
                       * *** **** ********* *********  ***** ***** ****** ** ******

consensus_10600#0      GTATTAAGATCGATGGTTAATGTTCTGTATTCCTCATTTTTATTGATAACTGACATTTAT 2033
consensus_10600#1      GTATAAAGATCGATGGTTAATGT-CTGTATTC-TCATTTATAGTGATAG-TGAC-TTTAT 854
                       **** ****************** ******** ****** ** *****  **** *****

consensus_10600#0      TTTTTTTGGTCTTTTAGTTTTCGTTACTGTGATAATTGTGTCTGTTGATTTTCATTGTAG 2093
consensus_10600#1      TTT-----GTGCTCTA-TATTCGTCGTCACGAATATTGC----GCGGAGTCTC-TGGTAG 903
                       ***     **  * ** * *****      **  ****     *  ** * ** * ****

consensus_10600#0      ATTTTAGCAGATGATTCCATCATCTTTAACCAAAAATACCGTACTTATTAATAAAAAAAA 2153
consensus_10600#1      -TTGCAGCAG-TGCT--CATCATCTA---------------------------------- 925
                        **  ***** ** *  ********                                   

consensus_10600#0      AAAAAAAAAAAAAAAAAAAAA 2174
consensus_10600#1      ---------------------


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)