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Schistosoma mansoni
cluster # 10620 cluster # 10620       Sequences # 19       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10620#0 length = 1378 sequences # 12  
consensus_10620#1 length = 575 sequences # 2  
consensus_10620#2 length = 462 sequences # 5  

consensusID : consensus_10620#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1378
fasta sequence
                              [CGGTGAATTCGATTAGAACTCTCGACCTGGTTTGAGCTTTGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTCCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCTGGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCATGATTTAATAATAGTTGTT-GTTGCATCGCTGGAGTAGCTGATGCCAAAAGCTGATAAAATATGTGGAAGCTGCGTTCATCCACTGCCTGACGGATAACACGAGCTTTCTCTAAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTACCAAAACGTGAAGAATT-ATCATTTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACTTTGA-CATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTT-TTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTC-TTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTATAGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAG-GGTTCATTCTTTGAACATAATCCTTAGGAAAGGTACATTTCTTTCCTGACTCCACGAGTTGTACTACACAATTTTCTCCCTGTTCTTGGAGCTTAATAGCTGCGACAAATGCTTCGCGTTCATGAGGGACCCACACCATATCCTTAGAAGATAAATCTGTTTCCCGCAAAGGCTCTTTCTCATCACGCAGAAGTTCTGCATTCATCGGACTATAAGATACTCTTTTATTATCACCCACGATTCTAAAACATCGAATAGTTTATACACTGCTTCCGTATGTACAAAACCAGATGTCCCGCTCGCGCTTTTAACTCAA]

[+] EMBL CD132720             [CGGTGAATTCGATTAGAACTCTCGACCTGGTTTGAGCTTTGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTCCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCTGGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCATGATTTAATAATAGTTGTT GTTGCATCGCTGGAGTAGCTGATGCCAAAAGCTGATAAAATATGTGGAAGCTGCGTTCATCCACTGCCTGACGGATAACACGAGCTNTCTCTAAAAGATATGTNTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTACC GAACGTGAAGAATTAATCA TTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAAAATAGGATTTGGTTTCAAAAGCTGGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD119427             [                                                                                                                                                                                                                                                                                                                                                          taAAGCACTAGCATGATTTAATAATAG TGTTNGTTGCATCGCTGGAGTAGCTGATGCCAAAAGCTGATAAAATATGTGGAAGCTGCGTTCATCCACTGCCTGACGGATAACACGAGCTTTCTCTAAAAGATATGTTTCAATATTAGCTCCAGCAATAAATACAGATGTGTCAAAATTAATACGGATGAATTTACCAAAACGTGAAGAATT ATCATTTATAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTCTCAAAAGCTGGGCTTCAAGTTCACCAATGCTagacggt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD154789             [                                                                                                                                                                                                                                                                                                                                                                                                              TGATGCCAAAAGCTGATAAAATATGTGGAAGCTGCGTTCATCCACTGCCTGACGGATAACGCGAGCTTTCTCTAAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTACCAAAACGTGAAGAATT ATCATTTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACTTTGA CATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD154861             [                                                                                                                                                                                                                                                                                                                                                                                                              TGATGCCAAAAGCTGATAAAATATGTGGAAGCTGCGTTCATCCACTGCCTGACGGATAACACGAGTTTTCTCTAAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTACCAAAACGTGAAGAATT ATCATTTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCT GGCTTCGAGTTCACCAATGCTGAAATCTTTCGTGTTAAACTTTGA CATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTT TTCGTATTTTCGGTCTTCCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTAGTCTTTCATGGCGCTTC TTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD116357             [                                                                                                                                                                                                                                                                                                                                                                                                               GATGNCNAAAGCTGATAAAATATGTGAAAGCTGCGTTCATCCACTGCCTGACGGATANCACGAGCTTTCTCTAAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCANAATTAATACGGATGAATTTACCAAAACGTGAAGAATT ATCATTTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACTTCGA CATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTT TTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTC TTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTATAGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCAT                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD097193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCTCTAAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTACCAAAACGTGAAGAATN ATCATTTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACTTTGA CATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTT TTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTC TTTCCTTTATACCGCTCTACTATATCTTCGTCATAGATCGGTAGTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD168716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACTTTGA CATTACATTTTTGGCTGACGTTTTTTGATGGTTTGCAAAAGTCGCAACACATGCGAGGTACTGTATTACCTTT TTCGTATTCTCGGCCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD114023             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACTTTGA CATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTT TTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTC TTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTATAGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAG GGTTCATTCTTCGAACATA                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD162328             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTCGTGTTAAACTTTGACCATTACATTTTT GCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACGGTATT CCTTTNCTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCCTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTCTTTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTATAGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAG GGTTCATTCTTTGAACATAATCCTTAGGAAAGGTACATTTCTTTCCTGACTCCACGAGTTGTACTACACAATTTTCTCCCTGTTCTTGGAGCTTAATAGCTGCGACAAATGCTTCGCGTTCATGAGGGACCCACACCATAT                                                                                                                                                                               ]
[-] EMBL CD162341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACAATCCGGAGTATGTATAGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTT AAGNGGTTCATTCTTTGAACATAATCCTTAGGAAAGGTACATTTCTTTCCTGACTCCACGAGTTGTACTACACAATTTTCTCCCTGTTCTTGGAGCTTAATAGCTGCGACAAATGCTTCGCGTTCATGAGGGACCCACACCATAT                                                                                                                                                                               ]
[-] EMBL CD189819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAG GGTTCATTCTTTGAACATAATCCTTAGGAAAGGTACATTTCTTTCCTGACTCCACGAGTTGTACTACACGATTTTCTCCCTGTTCTTGGAGCTTAATAGCTGCGACAAATGCTTCGCGTTCATGAGGGACCCACACCATATCCTTAGAAGATAAATCTGTTTCCCGCAAAGGCTCTTTCTCATCACGCAGAAGTTCTGCATTCATCGGACTATAAGATACTCTTTTATTATCACCCACGATTCTAAAACATCGAATAGTTTATACACTGCTTCCGTATGTACAAAACCAGATGTCCCGCTCGCGCTTTTAACTCAA]
[-] EMBL CD159438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCTGCGACAAATGCTTCGCGTTCATGAGGGACCCACACCATATCCTTAGAAGATAAATCTGTTTCCCGCAAAGGCTCTTTCTCATCACGCAGAAGTTCTGCACTCATCGGACTATAAGATACTCTTTTATTATCACCCATGATTCTAAAACATCGGCTAGTTTATACACTGCTTCCGTATGTACAAAGCCAGATGTCCCGCTCGCGCTTTTAACTCAA]


>consensus_10620#0 CGGTGAATTCGATTAGAACTCTCGACCTGGTTTGAGCTTTGGATACCAGATCTTTCCCAA CTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTCCATTCAGAGGGATACCCAGAAGAT GGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCT GGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTT GGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTT GCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCAT GATTTAATAATAGTTGTTGTTGCATCGCTGGAGTAGCTGATGCCAAAAGCTGATAAAATA TGTGGAAGCTGCGTTCATCCACTGCCTGACGGATAACACGAGCTTTCTCTAAAAGATATG TTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTAC CAAAACGTGAAGAATTATCATTTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAG GATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACT TTGACATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGA GGTACTGTATTACCTTTTTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACA AAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGA ATATATGTGGTGGTCTTTCATGGCGCTTCTTTCCTTTATACCACTCTACTATATCTTCGT CATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTAT AGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAA ACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAGGGTTCATTCTTTGAACAT AATCCTTAGGAAAGGTACATTTCTTTCCTGACTCCACGAGTTGTACTACACAATTTTCTC CCTGTTCTTGGAGCTTAATAGCTGCGACAAATGCTTCGCGTTCATGAGGGACCCACACCA TATCCTTAGAAGATAAATCTGTTTCCCGCAAAGGCTCTTTCTCATCACGCAGAAGTTCTG CATTCATCGGACTATAAGATACTCTTTTATTATCACCCACGATTCTAAAACATCGAATAG TTTATACACTGCTTCCGTATGTACAAAACCAGATGTCCCGCTCGCGCTTTTAACTCAA



consensusID : consensus_10620#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 575
fasta sequence
                              [CTAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTACCAAAACGTGAAGAATNATCATTTTCAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCGTTAAACTTTGACATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTTTTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTCTTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTATAGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAC]

[-] EMBL CD097214             [CTAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTACCAAAACGTGAAGAATNATCATTTTCAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCGTTAAACTTTGACATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTTTTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTCTTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTA                                                                                                           ]
[+] EMBL CD160386             [                                                                                                                                  GGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCGTTAAACTTTGACATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTGTATTACCTTTTTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATGTGGTGGTCTTTCATGGCGCTTCTTTCCTTTATACCACTCTACTATATCTTCGTCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTATAGATCATTCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAC]


>consensus_10620#1 CTAAAGATATGTTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACG GATGAATTTACCAAAACGTGAAGAATNATCATTTTCAATTGTTTTGGCATTTCCAAAGGC TTCTAGAATAGGATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCGTTAAACTTTGACAT TACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGAGGTACTG TATTACCTTTTTCGTATTTTCGGTCTTTCCAGATCCGGATTCACCGGTGCACAAAATGGA CTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCGAATATATG TGGTGGTCTTTCATGGCGCTTCTTTCCTTTATACCACTCTACTATATCTTCGTCATAGAT CGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTATAGATCAT TCCTGAGTAATATCTTGTCTTTAAGTTATTTAAAACTGAAGCTTCATTCATAAACGATAG GTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAC



consensusID : consensus_10620#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 462
fasta sequence
                              [AAGTGTTTTATTTATGCGTGCGACTAACCAAAGAAACAGCCTTTCGTAGATAGATTTTGAAATCGCTTCAACAGCAAATTCCACTTGCGTCTTGGTTTGAGCTTTGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTTCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCTGGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCATGATTTAATAATAGTTGTTGTTGCATCGCTGGAGTAGC]

[-] EMBL CD071185             [AAGTGTTTTATTTATGCGTGCGACTAACCAAAGAAACAGCCTTTCGTAGATAGATTTTGAAATCGCTTCAACAGCAAATTCCACTTGCGTCTTGGTTTGAGCTTTGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTTCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCTGGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCATGATTTAATAATAGTTGTTGTTGCATCGCTGGAGTAGC]
[-] EMBL CD071039             [AAGTGTTTTATTTATGCGTGCGACTAACCAAAGAAACAGCCTTTCGTAGATAGATTTTGAAATCGCTTCAACAGCAAATTCCACTTGCGTCTTGGTTTGAGCTTTGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTTCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCTGGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAACATGATTTAATAATAGTTGTTGTTGCATCGCTGGAGTAGC]
[-] EMBL CD071223             [AAGTGTTTTATTTATGCGTGCGACTAACCAAAGAAACAGCCTATCGTAGATAGATTTTGAAATCGCTTCAACAGCAAATTCCACTTGCGTCTTGGTTTGAGCTTTGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTTCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCTGGCGAAATTCCAAGTTT CCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCATGATTTAATAATAGTTGTTGTTGCATCGCTGGAGTAGC]
[+] EMBL CD163831             [                                     AGCCTTTCGTAGATAGATTTTGAAATCGCTTCAACAGCAAATTCCACTTGCGTCTTGGTTTGAGCTTTGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTTCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGTTCTGGTAAAGTTGCTTGGTCAGAACT                                                                                                                                                                                                                                 ]
[+] EMBL CD147996             [                                                                                                        TGGATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTTCATTCAGAGGGATACCCAGAAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCTGGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCATGATTTAATAAT                          ]


>consensus_10620#2 AAGTGTTTTATTTATGCGTGCGACTAACCAAAGAAACAGCCTTTCGTAGATAGATTTTGA AATCGCTTCAACAGCAAATTCCACTTGCGTCTTGGTTTGAGCTTTGGATACCAGATCTTT CCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTTCATTCAGAGGGATACCCAG AAGATGGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCG TTCCTGGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGC ATTTTGGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAA TTGTTGCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACT AGCATGATTTAATAATAGTTGTTGTTGCATCGCTGGAGTAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10620#0      CGGTGAATTCGATTAGAACTCTCGACCTGGTTTGAGCTTTGGATACCAGATCTTTCCCAA 60
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      CTTTTATGCGCGGTTTCAAAAATGCTTTGACCATTCCATTCAGAGGGATACCCAGAAGAT 120
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      GGGATACCTTTTCAGCAACTGAATGATCTGGTAAAGTTGCTTGGTCAGAACTTCGTTCCT 180
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      GGCGAAATTCCAAGTTTCCCAGGTGAAGCACAGCAGATATCACGCGGAATATGGCATTTT 240
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      GGTCCTCGTTATTAATTCCCATTATATCCATGGCTTCAGTTGTTTCACGGAAAAATTGTT 300
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      GCTCATCGATCCCCGGGAGTTCCATCATACCATTTGAAAGGAAACGATAAGCACTAGCAT 360
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      GATTTAATAATAGTTGTTGTTGCATCGCTGGAGTAGCTGATGCCAAAAGCTGATAAAATA 420
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      TGTGGAAGCTGCGTTCATCCACTGCCTGACGGATAACACGAGCTTTCTCTAAAAGATATG 480
consensus_10620#1      -------------------------------------------------CTAAAGATATG 11
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      TTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTAC 540
consensus_10620#1      TTTCAATATTAGCTCCAGCAATGAATCCAGATGTGTCAAAATTAATACGGATGAATTTAC 71
consensus_10620#2      ----------------------------AAGTGTTTTA---TTTATGCGTGCGA-CTAAC 28
                                                   *  *** * *   ** ** **   **  * **

consensus_10620#0      CAAAACGTGAAGAATTATCATTTTTAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAG 600
consensus_10620#1      CAAAACGTGAAGAATNATCATTTTCAATTGTTTTGGCATTTCCAAAGGCTTCTAGAATAG 131
consensus_10620#2      CAAAG------AAACAGCCTTTCGTAGATAGATT-----TTGAAATCGCTTCAACAGCAA 77
                       ****        **    * **   *  *   **     **  **  ***** * *  * 

consensus_10620#0      GATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACCAATGCTGAAATCTTTCGTGTTAAACT 660
consensus_10620#1      GATTTGCTTTCAAAAGCTGGGCTTCAAGTTCACC------------------GTTAAACT 173
consensus_10620#2      ATTCCACTTGCGT---CTTGGTTTGAGCTTTG---------------------------- 106
                         *   *** *     ** ** ** *  **                              

consensus_10620#0      TTGACATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGA 720
consensus_10620#1      TTGACATTACATTTTTGGCTGACGTTTTTTGATGTTTTGCAGAAGTCGCAACACATGCGA 233
consensus_10620#2      --GATACCAGATCTTTCCCAACTTTTATGCGCGGTTTCAAAAATGCTTTGAC-CATTTCA 163
                         ** *  * ** ***  *     ** *  *  ****   * * *     ** ***   *

consensus_10620#0      GGTACTGTATTACCTTTTTCGTATTTTCGGTCTTTCCAG-ATCCGGATTCACCGGTGCAC 779
consensus_10620#1      GGTACTGTATTACCTTTTTCGTATTTTCGGTCTTTCCAG-ATCCGGATTCACCGGTGCAC 292
consensus_10620#2      TTCAGAGGGATACCCAGAAGATGGGAT--ACCTTTTCAGCAACTGAATGATCTGGTAAAG 221
                          *  *   ****       *    *    **** *** * * * **   * ***  * 

consensus_10620#0      AAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCG 839
consensus_10620#1      AAAATGGACTGATCCTCACGATCTTGAAGCATGCTACGATAAGCTCCATCAGCAATAGCG 352
consensus_10620#2      TTGCTTGGTCAGAACTT-CGTTCCTG--GCGAAATTCCAAGTTTCCCAGGTGAAGCACAG 278
                           * *       **  ** ** **  **    * * *      ***   * *  *  *

consensus_10620#0      AATATATGTGGTGGTCTTTCATGGCGCTTCTTTCCTTTATACCACTCTACTATATCTTCG 899
consensus_10620#1      AATATATGTGGTGGTCTTTCATGGCGCTTCTTTCCTTTATACCACTCTACTATATCTTCG 412
consensus_10620#2      CAGATATCACGCGGAAT---ATGGCATTTTGGTCCTCGTTATTAATTCCCATTATATCC- 334
                        * ****   * **  *   *****  **   ****   **  * *   *  *** * * 

consensus_10620#0      TCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTA 959
consensus_10620#1      TCATAGATCGGTAGTCGTTTGTATGGGTTTACAACCACACAAAACAATCCGGAGTATGTA 472
consensus_10620#2      --ATGGCTT--CAGTTGTTT-CACGGAAAAATTGTTGCTCATCGATCCCCGGGAGTTCCA 389
                         ** * *    *** ****  * **    *      * **       ****    *  *

consensus_10620#0      T-AGATCATTCCTGAGTAATATCTTGTCTTTAA-GTTATTTAAAACTGAAGCTTCATTCA 1017
consensus_10620#1      T-AGATCATTCCTGAGTAATATCTTGTCTTTAA-GTTATTTAAAACTGAAGCTTCATTCA 530
consensus_10620#2      TCATACCATTTGAAAGGAAACGATAAGCACTAGCATGATTTAATAATAGTTGTTGTTGCA 449
                       * * * ****    ** **    *   *  **   * ****** * *     **  * **

consensus_10620#0      TAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAGGGTTCATTCTTTGAA 1077
consensus_10620#1      TAAACGATAGGTTTGCCATGTCCTTTATCTTGTCGTACTTTGAAC--------------- 575
consensus_10620#2      T---CGCTGGAGTAGC-------------------------------------------- 462
                       *   ** * *  * **                                            

consensus_10620#0      CATAATCCTTAGGAAAGGTACATTTCTTTCCTGACTCCACGAGTTGTACTACACAATTTT 1137
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      CTCCCTGTTCTTGGAGCTTAATAGCTGCGACAAATGCTTCGCGTTCATGAGGGACCCACA 1197
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      CCATATCCTTAGAAGATAAATCTGTTTCCCGCAAAGGCTCTTTCTCATCACGCAGAAGTT 1257
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      CTGCATTCATCGGACTATAAGATACTCTTTTATTATCACCCACGATTCTAAAACATCGAA 1317
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      TAGTTTATACACTGCTTCCGTATGTACAAAACCAGATGTCCCGCTCGCGCTTTTAACTCA 1377
consensus_10620#1      ------------------------------------------------------------
consensus_10620#2      ------------------------------------------------------------
                                                                                   

consensus_10620#0      A 1378
consensus_10620#1      -
consensus_10620#2      -
                        




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)