These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10622#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1328 fasta sequence [CTCCAGGCCAANAATTCGGCACGAGGTGTGCACCCCATCGCAGCCGGGGCCGGATTCCTGTTTTAAGTTGGTTGCATCCTGAAAGCAAAGCAAGTCTAACCAGAGCAAGTCAACCTCTTGTTGGTGTCCAGGGCCGTCGCAGCTCCGACGACAAAGAACTTGTTCGTCAGCTCAGGATAGCAAATGCTAATGCAAATAACCTTTTGATCTTTGATGCTCGTCCACAGGTCAATGCAATAGCTAATATGGGCGTTGGTGGAGGTGTTGAAAGTCCAGCTTATTATGAAAATGTTCAGTATATGTTCTTAAATATACAAAATATACACGCGATGCGGGCTGCATTGACAAAAGTTTTCGAGGCCTGTTTTCCATTACCAGACGATACACGATGGTTTAAGCAACTGGCTGACTCTAAATGGCTTTATCATATTAAACAAATTATTTTCGCTGCAACCAGTGTAGCCGACAAAATTGAAAATCATAAGACATCTGTGTTAATACATTGTTCAGACGGTTGGGACCGGACAACTCAAGTTACATCTTTAGCAATGTTAATGCTAGATCCGTACTACCGTACAATACGCGGATTTGAAGTATTAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACAACGCACAGGTGGACCTACCGATGGTGGAATTTATTTGCCTCCCAGCTCATCAACTGCTGTTGTTAATGAAACT-GGTGGAGGGCGACCATCAAGTCCTGAGGAGCGTTCCCCAGTATTTTTACAGTTCATTGATTGCGTATGGCAGACGATGCAGCAATTTCCTCACTCATTTGAATTCAACGAACGATTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTNTGGACAGCTTACTACATAAGATGGCATCCACTTATGCGTTTACAAGAGCCCATAGCACGTCGTGAGAGAGCCTTAATATTGANTATGAAACGATTCAGGGAACTTACAGCTGCCACGCAACGTGAAATGTGTAAAACC-ACTCTCAAC-ATGTATCTGATNACTC-ACACACAGTAGGTCCCGTTCAAACAG-TC-AAGATATG-AAATGTACTC-TCAGC-ATC-ACTG-AATGNGA-A-TATCTT--ATCTC--TTNTAAA--TTAAA-TGATTATACTAAATAATACAAAAC] [+] EMBL CD079538 [CTCCAGGCCAANAATTCGGCACGAGGTGTGCACCCCATCGCAGCCGGGGCCGGATTCCTGTTTTAAGTTGGTTGCATCCTGAAAGCAAAGCAAGTCTAACCAGAGCAAGTCAACCTCTTGTTGGTGTCCAGGGCCGTCGCAGCTCCGACGACAAAGAACTTGTTCGTCAGCTCAGGATAGCAAATGCTAATGCAAATAACCTTTTGATCTTTGATGCTCGTCCACAGGTCAATGCAATAGCTAATATGGGCGTTGGTGGAGGTGTTGAAAGTCCAGCTTATTATGAAAATGTTCAGTATATGTTCTTAAATATACAAAATATACACGCGATGCGGGCTGCATTGACAAAAGTTTTCGAGGCCTGTTTTCCATTACCAGACGATACACGATGGTTTAAGCAACTGGCTGACTCTAAATGGCTTTATCATATTAAACAAATTATTTTCGCTGCAACCAGTGTAGCCGACAAAATTGAAAATCATAAGACATCTGTGTTAATACATTGTTCAGACGGTTGGGACCGGACAACTCAAGTTACATCTTTAGCAATGTTAATGCTAGATCCGTACTACCGTACAATACGCGGATTTGAAGTATTAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACAACGCACAGGTGGACCTACCGATGGTGGAATTTATTTGCCTCCCAGCTCATCAACTGCTGTTGTTAATGAAACTGGGTGGAGGG ] [-] EMBL CD165844 [ GGTGTCCAGGGCCGTCGCAGCTCCGACGACAAAGAACTTGTTCGTCAGCTCAGGATAGCAAATGCTAATGCAAATAACCTTTTGATCTTTGATGCTCGTCCACAGGTCAATGCAATAGCTAATATGGGCGTTGGTGGAGGTGTTGAAAGTCCAGCTTATTATGAAAATGTTCAGTATATGTTCTTAAATATACAAAATATACACGCGATGCGGGCTGCATTGACAAAAGTTTTCGAGGCCTGTTTTCCATTACCAGACGATACACGATGGTTTAAGCAACTGGCTGACTCTAAATGGCTTTATCATATTAAACAAATTATTTTCGCTGCAACCAGTGTAGCCGACAAAATTGAAAATCATAAGATATCTGTGTTAATACATTGTTCAGACGGTTGGGACCGGACAACTCAAGTTACATCTTTAGCAATGTTAATGCTAGATCCGTACTACC ] [-] EMBL CD157256 [ ACTCTAAATGGCTTTATCATATTAAACAAATTATTTTCGCTGCAACCAGTGTAGCCGACAAAATTGAAAATCATAAGACATCTGTGTTAATACATTGTTCAGACGGTTGGGACCGGACAACTCAAGTCACATCTTTAGCAATGTTAATGCTAGATCCGTACTACCGTACAATACGCGGATTTGAAGTATTAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACAACGCACAGGTGGACCTACCGATGGTGGAATTTATTTGCCTCCCAGCTCATCAACTGCTGTTGTTAATGAAACT GGTGGAGGGCGACCATCAAGTCCTGAGGAGCGTTCCCCAGTATTTTTACAGTTCATTGATTGCGT ] [+] EMBL CD079528 [ GCAACCAGTGTAGCCGACAAAATTGAAAATCATAAGACATCTGTGTTAATACATTGTTCAGACGGTTGGGACCGGACAACTCAAGTTACATCTTTAGCAATGTTAATGCTAGATCCGTACTACCGTACAATACGCGGATTTGAAGTATTAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACAACGCACAGGTGGACCTACCGATGGTGGAATTTATTTGCCTCCCAGCTCATCAACTGCTGTTGTTAATGAAACT GGTGGAGGGCGACCATCAAGTCCTGAGGAGCGTTCCCCAGTATTTTTACAGTTCATTGATTGCGTATGGCAGACGATGCAGCAATTTCCTCACTCATTTGAATTCAACGAACGATTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTNTGGACAGCTTACTACATAAGATGGCATCCACTTATGCGTTTACAAGAGCCCATAGCACGTCGTGAGAGAGCCTTAATATTGANTATGAAACGATTCAGGGAACTTACAGCTGCCACGCAACGTGAAATGTGTAAAACC ACTCTCAAC ATGTATCTGATNACTC ACACACAGTAGGTCCCGTTCAAACAG TC AAGATATG AAATGTACTC TCAGC ATC ACTG AATGNGA A TATCTT ATCTC TTNTAAA TTAAA TGATTATACTA ] [+] EMBL CD077358 [ TCGTTTGGTCACAAATTTGCACATCGCACAGGTGGACCTACCGATGGTGGAATTTCTTTGCCTCCCAGCTCATCAACTGCTGTTGTTTATGAAACT GGTGGAGGGCGACCATCAAGTCCTGAGGAGCGTTCCCCAGTATTTTTACAGTTCATTGATTGCGTATGGCAGACGATGCAGCAATTTCCTCACTCATTTGAATTCAACGAACGATTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCA ] [-] EMBL CD073794 [ ATTTATTTGCCTCCCAGCTCATCAACTGCTGTTGTTAATGAAACT GGTGGAGGGCGACCATCAAGTCCTGAGGAGCGTTCCCCAGTATTTTTACAGTTCATTGATTGCGTATGGCAGACGATGCAGCAATTTCCTCACTCATTTGAATTCAACGAACGATTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTTTGGACAGCTTACTACATAAGATGGCATCCACTTATGCGTTTACAAGAGCCCATAGCACGTCGTGAGAGAGCCTTAATATTGATAATGAAACGATTCAGGGAACTTACAGCTGCCACGCAACGTG AATGTGTTAAACCAACTCTCAACAATGTATCTGATAACTCAACACACAGTAGGTCCCGTTCAAACAGTTCAAAGATATGAAAATGTACTCTTCAGCAATCAACTGAAATGTGATATTATCTTTAATCTCTTTTTTAAATGTTAAATTGATTTTAATTAATAATACAAAAC] [+] EMBL CD131164 [ CCAGTATTTTTACAGTTCATTGATTGCGTATGGCAGACGATGCAGCAATTTCCTCACTCATTTGAATTCAACGAACGATTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAGTTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGT ] consensusID : consensus_10622#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 908 fasta sequence [TATGACGCTATATGACTGGAGTTGGATAACCTGAGGATTTTCGTTATTTCGTGATATCTGCGCTAAATGTCAGCCTATAGCAGTTTACTTTCAGGCCATGCCTATCGTAAACTCCCCGGCGAAGAGAGGGTTGACCATTGCTTGGCTTCTCATGTAACTTATGGTGGTCTAAATCTGCATGGTGTGATAGAGCTAACAAACTTCCAAGTAGTATTTATTGCTTTACCAAACGAAGCTAGTTCTGCTCGTACACCAAAATCATTTCAGGGTTCAGATAGAAAGAGATACATTTTAAAGCTGCCATTGGGAACAATTCGAAGCATTGATCAGAAATCCAATCAGGGAAATATTTCACTTCATATTGTTTGTAAAGATATCCGAGAACTAGTGTTCGTCTTCTCGGACTGTGGGCGAACTGGTGGGTTTTGTGAAAATCTTAAAGCATACGCGTTTCCTGCTATTTCCAAGAAAGCGCTGTTTGCTTATTTATATGGAGCGAAGTGTATTGCGAATAGAGTTTTCGCCAACGATGGTTGGGACGTGTATAATCCAGAAGAGGAATACCACCGCCAGAACATTTTTACTAACGGCTGGAGGATTACAAAAAATTACATGGATTATAGGTTATGTGATACCTACCCAGCTGTTTTAGCTGTTCCATGGGAAGTAACTGATGAACTTCTAGTCGCATGTGCCCCCCATCGCAGCCGGGGCCGGATTCCTGTTTTAAGTGGNTGGCAT-CTGAAAGCAAAGCAAGTCTAACCAGAGCAAGTCAACCTCTTGTTGGTGTCCAGGGCCGTCGCAGCTCCGACGACAAAGAACTTGTTCGTCAGCTCAGGATAGCAAATGCTAATGCAAATAACCTTTTGATCTTTGATGCTCGTCCACAGGTCAATGCAATAGCTAAT] [+] EMBL CD187705 [TATGACGCTATATGACTGGAGTTGGATAACCTGAGGATTTTCGATATTTCGTGATATCTGCGCTAAATGTCAGCCTATAGCAGTTTACTTTCACGCCATGCCTATCGTAAACTCCCCGGCGAAGAGAGGGTTGACCATTGCTTGGCTTCTCATGTAACTTATGGTGGTCTAAATCTGCATGGTGCGATAGAGCTAACAAACTTCCAAGTAGTATTTATTGCTTTACCAAACGAAGCTAGTTCTGCTCGTACACCAAAATCATTTCAGGGTTCAGATAGAAAGAGATACATTTT ] [+] EMBL CD183539 [ ACCTGAGGATTTTCGTTATTTCGTGATATCTGCGCTAAATGTCAGCCTATAGCAGTTTACTTTCAGGCCATGCCTATCGTAAACTCCCCGGCGAAGAGAGGGTTGACCATTGCTTGGCTTCTCATGTAACTTATGGTGGTCTAAATCTGCATGGTGTGATAGAGCTAACAAACTTCCAAGTAGTATTTATTGCTTTACCAAACGAAGCTAGTTCTGCTCGTACACCAAAATCATTTCAGGGTTCAGATAGAAAGAGATACATTTTAAAGCTGCCATTGGGAACAATTCGAAGCATTGATCAGAAATCCAATCAGGGAAATATTTCACTTCATATTGTTTGTAAAGATATCCGAGAACTAGTGTTCGTCTTCTCGGACTGTGGGCGAACTGGTGGGTTTTGTGAAAATCTTAAAGCATACGCGTTTCCTGCTATTTCCAAGAAAGCGCTGTTTGCTTATTTATATGGAGCGAAGTGTATTGCGAATAGAGTTTTCGCCAACGATGGTTGGGACGTGTATAATCCAGAAGAGGAATACCACCGCCAGAACATTTTTACTAACGGCTGGAGGGATACAAAAAATTACATGGATTATAGGGTATGTGATACCTACCCAGCTGTTTTAGCTGNTCCATGGGAAGTAACTGATGAACTTCTAGTCGCATGTGCCCCCCATCGCAGCCGGGGCCGGATTCCTGTTTTAAGTGGNTGGCAT CTGAAAGCA ] [-] EMBL CD189608 [ GGATNTTCGTTATTTCGTGATATCTGCGCTAAATGTCAGCCTATAGCAGTTTACTTTCAGGCCATGCCTATCGTAAACTCCCCGGCGAAGAGAGGGTTGACCATTGCTTGGCTTCTCATGTAACTTATGGTGGTCTAAATCTGCATGGTGTGATAGAGCTAATAAACTTCCAAGTAGTATTTATTGCTTTACCAAACGAAGCTAGTTCTGCTCGTACATCAAAATCATTTCAGGGTTCAGATAGAAAGAGATACATTTTAAAGCTGCCATTGGGAACAATTCGAAGCATTGATCAGAAATCCAATCAGGGAAATATTTCACTTCATATTGTTTGTAAAGATATCCGAGAACTAGTGTTCGTCTTCTCGGACTGTGGGCGAACTGGTGGGTTTTGTGAAAATCTTAAAGCATACGCGTTTCCTGCTATTTCCAAGAAAGCGCTGTTTGCTTATTTATATGGAGCGAAGTGTATTGCGAATAGAGTTTTCGCCAACGATGGTTGGGACGTGTATAATCCAGAAGAGGA ] [-] EMBL CD179556 [ GGCTTCTCATGTAACTTATGGTGGTCTAAATCTGCATGGTGTGATAGAGCTAACAAACTTCCAAGTAGTATTTATTGCTTTACCAAACGAAGCTAGTTCTGCTCGTACACCAAAATCATTTCAGGGTTCAGATAGAAAGAGATACATTTTAAAGCTGCCATTGGGAACAATTCGAAGCATTGATCAGAAATCCAATCAGGGAAATATTTCACTTCATATTGTTTGTAAAGATATCCGAGAACTAGTGTTCGTCTTCTCGGACTGTGGGCGAACTGGTGGGTTTTGTGAAAATCTTAAAGCATACGCGTTTCCTGCTATTTCCAAGAAAGCGCTGTTTGCTTATTTATATGGAGCGAAGTGTATTGCGAATAGAGTTTTCGCCAACGATGGTTGGGACGTGTATAATCCAGAAGAGGAATACCACCGCCAGAACATTTTTACTAACGGCTGGAGGATTACAAAAATTAACATGGATTATAGGTTATGTGATACCTACCCAGCTGTTTTAGCTGTTCCATGGGAAGTAACTGATGAACTTCTAGTCGCATGTG ] [+] EMBL CD165362 [ ctaggctGGGAAATATTTCACTTCATATTGTTTGTAAAGATATCCGAGAACTAGTGTTCGTCTTCTCGGACTGTGGGCGAACTGGTGGGTTTTGTGAAAATCTTAAAGCATACGCGTTTCCTGCTATTTCCAAGAAAGCGCTGTTTGCTTATTTATATGGAGCGAAGTGTATTGCGAATAGAGTTTTCGCCAACGATGGTTGGGACGTGTATAATCCAGAAGAGGAATACCACCGCCAGAACATTTTTACTAACGGCTGGAGGATTAC AAAAATTACATGGATTATAGGTTATGTGATACCTACCCAGCTGTTTTAGCTGTTCCATGGGGAGTAACTGATGAACTTCTAGTCGCATGTG ] [+] EMBL CD192933 [ AATACCACCGCCAGAACATTTTTACTAACGGCTGGAGGATTACAAAAATTAACATGGATTATAGGTTATGTGATACCTACCCAGCTGTTTTAGCTGTTCCATGGGAAGTAACTGATGAACTTCTAGTCGCATGTGCACCCCATCGCAGCCGGGGCCGGATTCCTGTTTTAAGTTGGTTGCATCCTGAAAGCAAAGCAAGTCTAACCAGAGCAAGTCAACCTCTTGTTGGTGTCCAGGGCCGTCGCAGCTCCGACGACAAAGAACTTGTTCGTCAGCTCAGGATAGCAAATGCTAATGCAAATAACCTTTTGATCTTTGATGCTCGTCCACAGGTCAATGCAATAGCTAAT] consensusID : consensus_10622#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 488 fasta sequence [TAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTTTGGACAGCTTACTACATAAGATGGCATCCACTTATGCGTTTACAAGAGCCCATAGCACGTCGTGAGAGAGCCTTAATATTGATAATGAAACGATTCAGGGAACTTACAGCTGCCACGCAACGTGAATGTGTTAAACCAACTCTCAACAATGTATCTGATAACTCAACACACAGTAGGTCCCGTTCAAACAGTTGCAAAGATATGAAAATGTACTCTTCAGCAATCAACTGAAATGTGATATTATCTTTAATCTCTTTTTTAAATTTTAAATTGATTTTAATTACTAAAACAAAACTGCTACTAGAAAAAAAAAAAAAAA] [-] EMBL CD073804 [TAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTTTGGACAGCTTACTACATAAGATGGCATCCACTTATGCGTTTACAAGAGCCCATAGCACGTCGTGAGAGAGCCTTAATATTGATAATGAAACGATTCAGGGAACTTACAGCTGCCACGCAACGTGAATGTGTTAAACCAACTCTCAACAATGTATCTGATAACTCAACACACAGTAGGTCCCGTTCAAACAGTTGCAAAGATATGAAAATGTACTCTTCAGCAATCAACTGAAATGTGATATTATCTTTAATCTCTTTTTTAAATTTTAAATTGATTTTAATTACTAAAACAAAACTGC ] [-] EMBL AI394958 [ TTACTCCAACTATCATCAATGTATCTGATAACTCAACACACAGTAGGTCCCGTTCAAACAGTT CAAAGATATGAAAATGTACTCTTCAGCAATCAACTGAAATGTGATATTATCTTTAATCTCTTTTTTAAATTTTAAATTGATTTTAATTACTAATACAAAACTGCTACTAGAAAAAAAAAAAAAAA] consensusID : consensus_10622#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 412 fasta sequence [TTTTTTTTTTTTTTTTGAAATGTGATATTATCTTTAATCTCTTTTTTAAATTTTAAATTGATTTTAATTACTAATACAAAACTGCTACTAGAGTAACTTATTTTTTGGTATTTGGTCATCCCAAAAAAATGTGCTACACCGGGCAGCTTGATTGTCTGAAGCGCCTTGTGGGCGTGCACAAACCCAAAACCGCCTGCCGAGTCGACTACCTTTGGTTGTTTTCAACTTTTTCACAGTCCTCATGACGCAAGGTTCTTTGTGGCCAAGACATACAGGAGGTTTCTTCGGCCCTGAAAAAAGA-TT-CGCCATGCTTCAGTTGACTGAGCTGTTTTAGATGGATCGTAAATTTTTCTTTGGAGGGTTTCAGTCGTATTTTCTATACTTGAGGACTGATCATCTATGCATGTAGACG] [+] EMBL AI395320 [TTTTTTTTTTTTTTTTGAAATGTGATATTATCTTTAATCTCTTTTTTAAATTTTAAATTGATTTTAATTACTAATACAAAACTGCTACTAGAGTAACTTATTTTTTGGTATTTGGTCATCCCAAAAAAATGTGCTACACCGGGCAGCTTGATTGTCTGAAGCGCCTTGTGGGCGTGCACAAACCCAAAACCGCCTGCCGAGTCGACTACCTTTGGTTGTTTTCAACTTTTTCACAGTCCTCATGACGCAAGGTTCTTTGTGGCCAAGACATACAGGAGGTTTCTTCGGCCCTGAAAAAAGA TT CGCCATGCTTCAGTTGACTGAGCTGTTTTAGATGGATCGTAAATTTTTCTTTGGAGGGT ] [+] EMBL AI395748 [ TTTTTTTTTTTTT TTT TATTATCTTTAATCTCTTTTTTAAATTTTAAATTGATTTTAATTACTAATACAAAACTGCTACTAGAGTAACTTATTTTTTGGTATTTGGTCATCCCAAAAAAATGTGCTACACCGGGCAGCTTGATTGTCTGAATCGCCTTGTGGGCGTGCACAAACCCAAAACCGCCTGCCGAGTCGACTACCTTTGGATGTTTTCAACTTTTTCACAGTCCTCATGACGCAAGGTTCTTTGTGGCCAAGACATACAGGAGGTTTCTTCGGCCCTAAAACAAGACTTCCGCCATGCTTCAGTTGACTGAGCTGTTTTAGATGGATCGTAAATTTTTCTTTGGAGGGTTTCAGTCGTATTTTCTATACTTGAGGACTGATCATCTATGCATGTAGACG] consensusID : consensus_10622#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 316 fasta sequence [CTCCGGACAACTCAAGTTACATCTTTAGCAATGTTAATGCTAGATCCGTACTACCGTACAATACGCGGATTTGAAGTATTAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACAACGCACAGGTGGACCTACCGATGGTGGAATTTATTTGCCTCCCAGCTCATCAACTGCTGTTGTTAATGAAACTGGTGGAGGGCGACCATTAAGTTCTGAGGAGCGTTCCCCAATATTTTTACAGGTCATTGATTGCGTATGGGAAACGATGCATCAATTTTCACACTCATTTGAAATCCATATTAAGCCTTATA] [+] EMBL BG930625 [CTCCGGACAACTCAAGTTACATCTTTAGCAATGTTAATGCTAGATCCGTACTACCGTACAATACGCGGATTTGAAGTATTAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACAACGCACAGGTGGACCTACCGATGGTGGAATTTATTTGCCTCCCAGCTCATCAACTGCTGTTGTTAATGAAACTGGTGGAGGGCGACCATTAAGTTCTGAGGAGCGTTCCCCAATATTTTTACAGGTCATTGATTGCGTATGGGAAACGATGCATCAATTTTCACACTCATTTGAAATCCATATTAAGCCTTATA] consensusID : consensus_10622#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 286 fasta sequence [TTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTTTGGACAGCTTACTACATAAGATGGCATCCACTTATGCGTTTACAAGACCCCCCATCCATCA] [+] EMBL BG930719 [TTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAATTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGGTCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTTTGGACAGCTTACTACATAAGATGGCATCCACTTATGCGTTTACAAGACCCCCCATCCATCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10622#0 CTCCAGGCCAANAATTCGGCACGAGGTGTGCACCCCATCGCAGCCGGGGCCGGATTCCTG 60 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 TTTTAAGTTGGTTGCATCCTGAAAGCAAAGCAAGTCTAACCAGAGCAAGTCAACCTCTTG 120 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 TTGGTGTCCAGGGCCGTCGCAGCTCCGACGACAAAGAACTTGTTCGTCAGCTCAGGATAG 180 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 CAAATGCTAATGCAAATAACCTTTTGATCTTTGATGCTCGTCCACAGGTCAATGCAATAG 240 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 CTAATATGGGCGTTGGTGGAGGTGTTGAAAGTCCAGCTTATTATGAAAATGTTCAGTATA 300 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 TGTTCTTAAATATACAAAATATACACGCGATGCGGGCTGCATTGACAAAAGTTTTCGAGG 360 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 CCTGTTTTCCATTACCAGACGATACACGATGGTTTAAGCAACTGGCTGACTCTAAATGGC 420 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 TTTATCATATTAAACAAATTATTTTCGCTGCAACCAGTGTAGCCGACAAAATTGAAAATC 480 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 ------------------------------------------------------------ consensus_10622#0 ATAAGACATCTGTGTTAATACATTGTTCAGACGGTTGGGACCGGACAACTCAAGTTACAT 540 consensus_10622#4 --------------------------------------CTCCGGACAACTCAAGTTACAT 22 consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------TTTCTCATAACAATAATGGATGAGTTATAT 30 consensus_10622#3 ---------------------------------------TTTTTTTTTTTTTTTTGAAAT 21 consensus_10622#1 ---TATGACGCTATATGACTGGAGTTGGATAACCTGAGGATTTTCGTTATTTCGTGATAT 57 consensus_10622#0 CTTTAGCAATGTTAATGCTAGATC--CGTACTACCGTACAATACGCGGATTTGAA-GTAT 597 consensus_10622#4 CTTTAGCAATGTTAATGCTAGATC--CGTACTACCGTACAATACGCGGATTTGAA-GTAT 79 consensus_10622#2 ----------------------------TAATTCAGAA--ATGCAAGGACGCGACCATGG 30 consensus_10622#5 GCTGCGCGATTCGGAACATTCCTC--TTTAATTCAGAA--ATGCAAGGACGCGACCATGG 86 consensus_10622#3 GTGATATTATCTTTAATCTCTTTT--TTAAATTTTAAATTGATTTTAATTACTAATACAA 79 consensus_10622#1 CTGCGCTAAATGTCAGCCTATAGCAGTTTACTTTCAGGCCATGCCTA-TCGTAAACTCCC 116 * * * consensus_10622#0 TAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACA-ACGCACAGGTGGACCT 656 consensus_10622#4 TAGTCGAAAAAGAATGGTGTTCGTTTGGTCACAAATTTGCACA-ACGCACAGGTGGACCT 138 consensus_10622#2 TGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCA 90 consensus_10622#5 TGTACGTGAAAGGACTATCTCATTGTGGGCATATATCAATGCAGACATCCAGTTGTATCA 146 consensus_10622#3 AACTGCTACTAGAGTAACTTATTTTTTGGTATTTGGTCATCC---CAAAAAAATGTGCTA 136 consensus_10622#1 CGGCGAAGAGAGGGTTGACCATTGCTTGGCTT---CTCATGTA-ACTTATGGTGGTCTAA 172 ** * * * * consensus_10622#0 A--CCGATGGTGGAATT-TATTTG---CCTCCCAGCT--CATCAACTGCTGTTGTTAATG 708 consensus_10622#4 A--CCGATGGTGGAATT-TATTTG---CCTCCCAGCT--CATCAACTGCTGTTGTTAATG 190 consensus_10622#2 AAACCCACTTTATACTCCTGCTGA---GATCAGTGGT--CATCG--TGTGATTTTTCCTC 143 consensus_10622#5 AAACCCACTTTATACTCCTGCTGA---GATCAGTGGT--CATCG--TGTGATTTTTCCTC 199 consensus_10622#3 CACCGGGCAGCTTGATTGT-CTGA---AGCGCCTTGT--GGGCGTGCACAAACCCAAAAC 190 consensus_10622#1 ATCTGCATGGTGTGATAGAGCTAACAAACTTCCAAGTAGTATTTATTGCTTTACCAAACG 232 * * * consensus_10622#0 AAACTGGTGGAGGGCGACCATCAAGTCCTGAGGAGCGTTCCC--CAGTATTTTTACAGTT 766 consensus_10622#4 AAACTGGTGGAGGGCGACCATTAAGTTCTGAGGAGCGTTCCC--CAATATTTTTACAGGT 248 consensus_10622#2 AGCATGCATTAGCTCAGC--TTCAATTTTGGACAGCTTACTA--CA-TAAGATGGCA-TC 197 consensus_10622#5 AGCATGCATTAGCTCAGC--TTCAATTTTGGACAGCTTACTA--CA-TAAGATGGCA-TC 253 consensus_10622#3 CGCCTGCCGAGTCGACTACCTTTGGTTGTTTTCAACTTTTT---CACAGTCCTCATGACG 247 consensus_10622#1 AAGCTAGTTCTGCTCGTACACCAAAATCATTTCAGGGTTCAGATAGAAAGAGATACATTT 292 * * * consensus_10622#0 CATTGATTGCGTATGGCAGACGATGCAGCAATTTCCTCACTCATTTGAATTCAACGAACG 826 consensus_10622#4 CATTGATTGCGTATGGGAAACGATGCATCAATTTTCACACTCATTTGAAATCCAT--ATT 306 consensus_10622#2 CACTTAT-GCGTTTACAAGAGCCCATAGCACGTCGTGAGAGAGCCTTAATATTGATAATG 256 consensus_10622#5 CACTTAT-GCGTTTACAAGACCCCCCATC-CATCA------------------------- 286 consensus_10622#3 CAAGGTTCTTTGTGGCCAAGACATACAGGAGGTTTCTTCGGCCCTGAAAAAAGATTCGCC 307 consensus_10622#1 TAAAGCTGCCATTGGGAACAATTCGAAGCATTGATCAGAAATCCAATCAGGGAAAT-ATT 351 * * * * consensus_10622#0 ATTTCTCATAACAATAATGGATGAGTTATATGCTGCGCGATTCGGAACATTCCTCTTTAA 886 consensus_10622#4 AAGCCTTATA-------------------------------------------------- 316 consensus_10622#2 AAACGATTCAGGGAACTTACAGCTGCCACGCAACGTGAATGTGTTAAACCAACTCTCAAC 316 consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ATGCTTCAGTTGACTGAGCTGTTTTAGATGGATCGTAAATTTTTCTTTGGAGGGTTTCAG 367 consensus_10622#1 TCACTTCATATTGTTTGTAAAGATATCCGAGAACTAGTGTTCGTCTTCTCGGACTGTGGG 411 consensus_10622#0 TTCAGAAATGCAAGGACGCGACCATGGTGTACGTGAAAGGACTATCTCATTGTGGGCATA 946 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 AATGTATCTGATAACTCAACACACAGTAGGTCCCGTTCAAACAGTTGCAAAGATATGAAA 376 consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 TCGTATTTTCTATACTTGAGGACTGATCATCTATGCATGTAGACG--------------- 412 consensus_10622#1 CGAACTGGTGGGTTTTGTGAAAATCTTAAAGCATACGCGTTTCCTGCTATTTCCAAGAAA 471 consensus_10622#0 TATCAATGCAGACATCCAGTTGTATCAAAACCCACTTTATACTCCTGCTGAGATCAGTGG 1006 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ATGTACTCTTCAGCAATCAACTGAAATGTGATATTATCTTTAATCTCTTTTTTAAATTTT 436 consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 GCGCTGTTTGCTTATTTATATGGAGCGAAGTGTATTGCGAATAGAGTTTTCGCCAACGAT 531 consensus_10622#0 TCATCGTGTGATTTTTCCTCAGCATGCATTAGCTCAGCTTCAATTNTGGACAGCTTACTA 1066 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 AAATTGATTTTAATTACTAAAACAAAACTGCTACTAGAAAAAAAAAAAAAAA-------- 488 consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 GGTTGGGACGTGTATAATCCAGAAGAGGAATACCACCGCCAGAACATTTTTACTAACGGC 591 consensus_10622#0 CATAAGATGGCATCCACTTATGCGTTTACAAGAGCCCATAGCACGTCGTGAGAGAGCCTT 1126 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 TGGAGGATTACAAAAAATTACATGGATTATAGGTTATGTGATACCTACCCAGCTGTTTTA 651 consensus_10622#0 AATATTGANTATGAAACGATTCAGGGAACTTACAGCTGCCACGCAACGTGAAATGTGTAA 1186 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 GCTGTTCCATGGGAAGTAACTGATGAACTTCTAGTCGCATGTGCCCCCCATCGCAGCCGG 711 consensus_10622#0 AACCACTCTCAACATGTATCTGATNACTCACACACAGTAGGTCCCGTTCAAACAGTCAAG 1246 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 GGCCGGATTCCTGTTTTAAGTGGNTGGCATCTGAAAGCAAAGCAAGTCTAACCAGAGCAA 771 consensus_10622#0 ATATGAAATGTACTCTCAGCATCACTGAATGNGAATATCTTATCTCTTNTAAATTAAATG 1306 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 GTCAACCTCTTGTTGGTGTCCAGGGCCGTCGCAGCTCCGACGACAAAGAACTTGTTCGTC 831 consensus_10622#0 ATTATACTAAATAATACAAAAC-------------------------------------- 1328 consensus_10622#4 ------------------------------------------------------------ consensus_10622#2 ------------------------------------------------------------ consensus_10622#5 ------------------------------------------------------------ consensus_10622#3 ------------------------------------------------------------ consensus_10622#1 AGCTCAGGATAGCAAATGCTAATGCAAATAACCTTTTGATCTTTGATGCTCGTCCACAGG 891 consensus_10622#0 ----------------- consensus_10622#4 ----------------- consensus_10622#2 ----------------- consensus_10622#5 ----------------- consensus_10622#3 ----------------- consensus_10622#1 TCAATGCAATAGCTAAT 908 |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||