cluster # 10625

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Schistosoma mansoni
cluster # 10625 cluster # 10625 Sequences # 19 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10625#0 length = 760 sequences # 16

consensus_10625#1 length = 620 sequences # 2
consensus_10625#2 length = 321 sequences # 1

consensusID : consensus_10625#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 760
fasta sequence

                              [AATTGTTTTGCAAAGCCAAAATCACTATTTCTCAGGGAAGATATATCACCAGAATCGTCTGCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAACTTAATGTATTTGCAAT-CACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAAGGTTGACATGATTGTTGCAACTATTTGTAGTTGTTGGATTATGATTATTATTATTATGCTCTGCAAAAAATCCAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG]

[-] EMBL AI977767             [AATTGTTTTGCAAAGCCAAAATCACTATTTCTCAGGGAAGATATATCACCAGAATCGTCTGCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAACTTAATGTATTTGCAAT CACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATT                                                                                                                    ]
[+] EMBL CD060998             [                        aagTTTCT AGGGAAGATATATCACCAGAATCGTCTGCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAACTTAATGTATTTGCAAT CACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTCTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCCCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACT                                                                                                                            ]
[+] EMBL CD124214             [                                                             CATATAATACATTGGATGGCGTAAGATCACGATGCACAACCATATTACTGCGTAAATAACTTAATGTATTTGCCAT CACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTCGTCGGAATATTGTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTNTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAAGGNTGACATGATTGTTGCAACTATNTGTAGTTGTTGGATTATGAATATTTATATTATGCTCTGCANAAAATCCAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCT ]
[-] EMBL CD124290             [                                                              ATAT ATACA TGGAT GTTTAAGATCACGATGCACACCCATATTACTGTGTAAATAACTTAATGTA TTGCATTNCACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAAGGTTGACATGATCGTTGCAACTATTTGTAGTTGTTGTATTATGATTATTATTATTATGCTCTGCAAAAAATCCAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG]
[-] EMBL AI977759             [                                                                                    AGATCACGATCCACAACCATATTACTGTGTAAATAACTTAATGTATTTGCAAT CACCTAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTA                                                                                                                   ]
[+] EMBL CD124199             [                                                                                                                                     caga CACATATGAGATATTACTGGCCGCACTTTCACAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCANACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAAGGTTGACATGATTGTTGCAACTATTTGTAGTTGTTGGATTATGATTATTATTATTATGCTCTGC AAAAATCCAGGCGCTACATAACTGAAATCACG AACAATGCATGCGCT ]
[-] EMBL AI977760             [                                                                                                                                                                     TTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTA                                                                                                                   ]
[-] EMBL AI977746             [                                                                                                                                                                          AAAG AATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCANACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTA                                                                                                                   ]
[-] EMBL AI977772             [                                                                                                                                                                            AGAAA TTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTA                                                                                                                   ]
[-] EMBL AI977763             [                                                                                                                                                                                              ATTTTATCCAATAACTCACCACGTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTA                                                                                                                   ]
[-] EMBL CD092889             [                                                                                                                                                                                                               ACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTNTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAACACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGATATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATTATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTGTTTATTAAGGTTGACATGATTGTTGCAACTATTTGTAGTTGTTGTATTATGATTATTATTATTATGCTCTGCAAAAAATCCAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG]
[-] EMBL AI977757             [                                                                                                                                                                                                                                                   ATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATT                                                                                                                    ]
[-] EMBL AI977771             [                                                                                                                                                                                                                                                        CATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATT                                                                                                                    ]
[-] EMBL AI977756             [                                                                                                                                                                                                                                                                                AAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTA                                                                                                                   ]
[-] EMBL AI977748             [                                                                                                                                                                                                                                                                                                                                                                           AACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTA                                                                                                                   ]
[+] EMBL CD124241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAANGGTGACATGATTGTTGCAAC                                                                                             ]




>consensus_10625#0
AATTGTTTTGCAAAGCCAAAATCACTATTTCTCAGGGAAGATATATCACCAGAATCGTCT
GCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAA
CTTAATGTATTTGCAATCACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTT
TCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACT
AAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTA
AGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAG
CAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTG
ATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCA
GCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACA
TGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATTATAATTGAATTTCTCTTTCGGT
GAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAAGGTTGACATGATTG
TTGCAACTATTTGTAGTTGTTGGATTATGATTATTATTATTATGCTCTGCAAAAAATCCA
GGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG

consensusID : consensus_10625#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 620
fasta sequence

                              [CTGCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAACTTAATGTATTTGCAATCACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTCTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATCATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAACCTGCGAACCTATGAGGGGATCATCTATCGTC]

[-] EMBL CD060758             [CTGCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAACTTAATGTATTTGCAATCACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTCTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATCATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAACCTGCGAACCTATGAGGGGATCATCTATCGTC]
[-] EMBL CD060795             [                                                                                                                                                                                       AATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTNTGATTTATCAATAATCTTAACACAGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAACATGTGCTGGATTCGCACGATCATCATCGTGTCGAGACCTATAATTGAATTTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAACCTGCGAGCCTAT ATGGGATCATC       ]




>consensus_10625#1
CTGCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAAT
AACTTAATGTATTTGCAATCACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATT
TTTCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAA
CTAAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTC
TAAGCAATATTTCAACTTCTTCACGGGCATCCCGTTCTGATTTATCAATAATCTTAACAC
AGCAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTAT
TGATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGC
CAGCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCTTCTGGAA
CATGTGCTGGATTCGCACGATCATCATCGTGTCGAGAATCATAATTGAATTTCTCTTTCG
GTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAACCTGCGAACCTA
TGAGGGGATCATCTATCGTC

consensusID : consensus_10625#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 321
fasta sequence

                              [TCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCAAAAAACACAATTTTTCCCTGTAGGAGTTAAAGGTGGAAGATATATTTTGAACATGGACGGTGTGATTGCCGATATTTTTGTGTTGAGGAAATATAAATTAAATTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTGTTTATTAAGGTTGACATGATTGTTGCAACTATTTGTAGTTGTTGTATTATGATTATTATTATTATGCTCTGCAAAAAATCCAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG]

[-] EMBL CD162859             [TCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCAAAAAACACAATTTTTCCCTGTAGGAGTTAAAGGTGGAAGATATATTTTGAACATGGACGGTGTGATTGCCGATATTTTTGTGTTGAGGAAATATAAATTAAATTCTCTTTCGGTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTGTTTATTAAGGTTGACATGATTGTTGCAACTATTTGTAGTTGTTGTATTATGATTATTATTATTATGCTCTGCAAAAAATCCAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG]




>consensus_10625#2
TCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCAGCTAAGCAAAAAACACAATTT
TTCCCTGTAGGAGTTAAAGGTGGAAGATATATTTTGAACATGGACGGTGTGATTGCCGAT
ATTTTTGTGTTGAGGAAATATAAATTAAATTCTCTTTCGGTGAACTCAAACAAGTGGTGT
TCGTTCCATTCAATACTTGTTTATTAAGGTTGACATGATTGTTGCAACTATTTGTAGTTG
TTGTATTATGATTATTATTATTATGCTCTGCAAAAAATCCAGGCGCTACATAACTGAATT
CACGAAACAATGCATGCGCTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10625#0      AATTGTTTTGCAAAGCCAAAATCACTATTTCTCAGGGAAGATATATCACCAGAATCGTCT 60
consensus_10625#1      ----------------------------------------------------------CT 2
consensus_10625#2      ------------------------------------------------------------
                                                                                   

consensus_10625#0      GCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAA 120
consensus_10625#1      GCATATAATACATTGGATGGTTTAAGATCACGATGCACAACCATATTACTGTGTAAATAA 62
consensus_10625#2      ------------------------------------------------------------
                                                                                   

consensus_10625#0      CTTAATGTATTTGCAATCACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTT 180
consensus_10625#1      CTTAATGTATTTGCAATCACATAAGTGATATTACTGGCTTCACGTTCAGAAAGAAATTTT 122
consensus_10625#2      ------------------------------------------------------------
                                                                                   

consensus_10625#0      TCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACT 240
consensus_10625#1      TCTCGGAATATTTTATCCAATAACTCACCACCTTTTAAATATTCCATAACAAGATAAACT 182
consensus_10625#2      ------------------------------------------------------------
                                                                                   

consensus_10625#0      AAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTA 300
consensus_10625#1      AAATTCTCATTTTCATAAACATCTCGAACGGAAACAATATTTGGATGATTATGGTGTCTA 242
consensus_10625#2      ------------------------------------------------------------
                                                                                   

consensus_10625#0      AGCAATATTTCAACTTCTTCACGGGCATCCCGTTTTGATTTATCAATAATCTTAACACAG 360
consensus_10625#1      AGCAATATTTCAACTTCTTCACGGGCATCCCGTTCTGATTTATCAATAATCTTAACACAG 302
consensus_10625#2      ------------------------------------------------------------
                                                                                   

consensus_10625#0      CAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTG 420
consensus_10625#1      CAAACGGCATTCGTATTTCGATGACAGCACTTATGTACAACTGAAAAGGAGCCTTTATTG 362
consensus_10625#2      ------------------------------------------------------------
                                                                                   

consensus_10625#0      ATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCA 480
consensus_10625#1      ATTTCCTCCAGTAAGACATAATCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCA 422
consensus_10625#2      ---------------------TCGACTGAAAACGGTTTATATTTCACACCTGACAAGCCA 39
                                            ***************************************

consensus_10625#0      GCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCT-TCTGGAAC 539
consensus_10625#1      GCTAAGCGAAGAAAACGTCTTGCCACTGTAGGAGTTAAAGGTGGAAGATCT-TCTGGAAC 481
consensus_10625#2      GCTAAGCAAAAAACACAATTTTTCCCTGTAGGAGTTAAAGGTGGAAGATATATTTTGAAC 99
                       ******* ** ** **   **  * ************************ * * * ****

consensus_10625#0      ATGTGCTGGATTCGCACGATCATCATCGTGTCGAG-AATTATAATTGAATTTCTCTTTCG 598
consensus_10625#1      ATGTGCTGGATTCGCACGATCATCATCGTGTCGAG-AATCATAATTGAATTTCTCTTTCG 540
consensus_10625#2      ATGGACGGTGTGATTGCCGATATTTTTGTGTTGAGGAAATATAAATTAAATTCTCTTTCG 159
                       ***  * *  *     *    **  * **** *** **  **** * ** **********

consensus_10625#0      GTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAAGGTTGACATGAT 658
consensus_10625#1      GTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTCTTTATTAACCTGCGAACCTA 600
consensus_10625#2      GTGAACTCAAACAAGTGGTGTTCGTTCCATTCAATACTTGTTTATTAAGGTTGACATGAT 219
                       *************************************** ********  *    *    

consensus_10625#0      TGTTGCAACTATTTGTAGTTGTTGGATTATGATTATTATTATTATGCTCTGCAAAAAATC 718
consensus_10625#1      TGAGGGGATCATCTATCGTC---------------------------------------- 620
consensus_10625#2      TGTTGCAACTATTTGTAGTTGTTGTATTATGATTATTATTATTATGCTCTGCAAAAAATC 279
                       **  *  *  ** * * **                                         

consensus_10625#0      CAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG 760
consensus_10625#1      ------------------------------------------
consensus_10625#2      CAGGCGCTACATAACTGAATTCACGAAACAATGCATGCGCTG 321