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Schistosoma mansoni
cluster # 10629 cluster # 10629       Sequences # 19       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10629#0 length = 1148 sequences # 6  
consensus_10629#1 length = 602 sequences # 7  
consensus_10629#2 length = 579 sequences # 4  
consensus_10629#3 length = 259 sequences # 1  
consensus_10629#4 length = 235 sequences # 1  

consensusID : consensus_10629#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1148
fasta sequence
                              [TGAAAAAGAAGAACAAGTCAATAATCTTGATAATATACAATATCGTGATGATGTTATAGATCATTCTTTTCAACCATACAATATCCAAACTCATGCACACCTAGATGAAGAGAATGAGGAAGAAAACTTAGAAAAATCGTCTCCAGAACTATTGACAAAGTATGAAGAGAATTACACACCTAAATCCATTAAAAATTGTTATGAACAAAAACATGAACAATGTCTACCAGATCAAGAAACACATATTGAAATGAATTATCTACAATTGGATCAACATAAACCAATTGAAGAAACTAATTCAGATATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATACTGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGGTATAACAACTGATGACTATAATAGAACAATGAATTCCCATGAAATTCACTCACACCAAAATATTGAATTAGAGGTTGAAAATGTTTCTTTAGAACATGATATTACAAATGCTCAAGATGATGAGATGATACCAGATTATTCATTACTTAGTATGGCAACAAATTATCCTAGTGATCCTACTAAATATCAAGTTGATTCAAGTACAGATCAAATAATAAATACTAATCAGACTCTAGAAGGATTTTCATACAATAATCATCATCTGTCAAATGAAACAGATTTTGCTATTCAAAGAAAAGTTGAAGCAAGTGAAACTGACGAAGAATCATATCAAAAAGTAGATTCGACAACCTATGAAGAATCACATTTTATTAGTCATGATATACATAATGATGTTGATAGCCGTGTCGATATTAACTCAGATTCATACCAAGAACCAGATAATTCATTACATGTAGATATTGAAACGAATGTTGAAGGTCATCACCAACAGCAATTTATTAGCCCTGATTCAGAAATCTCAGAGAATTCAACCATACAGATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAACATCAACAAGACGAACAACATTCTGAAGCTGATTTATTAATTTCTAGTCCGAATCGTTCAGTCTCACCAAATTACAATATTGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAGATAGGATTATGTTGGGGATGATATTGT]

[+] EMBL CD169588             [TGAAAAAGAAGAACAAGTCAATAATCTTGATAATATACAATATCGTGATGATGTTATAGATCATTCTTTTCAACCATACAATATCCAAACTCATGCACACCTAGATGAAGAGAATGAGGAAGAAAACTTAGAAAAATCGTCTCCAGAACTATTGACAAAGTATGAAGAGAATTACACACCTAAATCCATTAAAAATTGTTATGAACAAAAACATGAACAATGTCTACCAGATCAAGAAACACATATTGAAATGAATTATCTACAATTGGATCAACATAAACCAATTGAAGAAACTAATTCAGATATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATACTGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGGTATAACAACTGATGACTATAATAGAACAATGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD169392             [ GAAAAAGAAGAACAAGTCAATAATCTTGATAATATACAATATCGTGATGATGTTATAGATCATTCTTTTCAACCATACAATATCCAAACTCATGCACACCTAGATGAAGAGAATGAGGAAGAAAACTTAGAAAAATCGTCTCCAGAACTATTGACAAAGTATGAAGAGAATTACACACCTAAATCCATTAAAAATTGTTATGAACAAAAACATGAACAATGTCTACCAGATCAAGAAACACATATTGAAATGAATTATCTACAATTGGATCAACATAAACCAATTGAAGAAACTAATTCAGATATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATACTGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGGTATAACAACTGATGACTATAATAGAACAATGAATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD197843             [                                                                                                                             ACTTAGAAAAATCGTCTCCAGAACTATTGACAAAGTATGAAGAGAATTACACACCTAAATCCATTAAAAATTGTTATGAACGAAAACATGAACAATGTCTACCAGATCAAGAAACACATATTGAAATGAATTATCTACAATTGGATCAACATAAACCAACTGAAGAAACTAATTCAGATATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATACTGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGGTATAACAACTGATGACTATAATAGAACAATGAATTCCCATGAAATTCACTCACACCAAAATATTGAATTAGAGGTTGAAAATGTTTCTTTAGAACATGATATTACAAATGCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD117335             [                                                                                                                                                                                                                                                                                         CAATTGAAGAAACTAATTCAGAGATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATACTGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGGTATAACAACTGATGACTATAATAGAACAATGAATTCCCATGAAATTTACTCACAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD128350             [                                                                                                                                                                                                                                                                                                     CTAATTCAGATATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATACTGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGGTAAAACAACTGATGACTATAATAGAACAATGAATTCCCATGAAATTCACTCACACCAAAATATTGAATTAGAGGTTGAAAATGTTTCTTTAGAACATGATATTACAAATGCTCAAGATGATGAGATGATACCAGATTATTCATTACTTAGTATGGCAACAAATTATCCTAGTGATCCTACTAAATATCAAGTTGATTCAAGTACAGATCAAATAATAAATACTAATCAGACTCTAGAAGGATTTTCATACAATAATCATCATCTGTCAAATGAAACAGATTTTGCTATTCAAAGAAAAGTTGAAGCAAGTGAAACTGACGAAGAATCATATCAAAAAGTAGATTCGACAACCTATGAAGAATCACATTTTATTAGTCAT                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CD151711             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTATTCATTACTTAGTATGGCAACAAATTATCCTAGTGATCCTACTAAATATCAAGTTGGTTCAAGTACAGATCAAATAATAAATACTAATCAGACTCTAGAAGGATTTTCATACAATAATCATCATCTGTCAAATGAAACAGATTTTGCTATTCAAAGAAAAGTTGAAGCAAGTGAAACTGACGAAGAATCATATCAAAAAGTAGATTCGACAACCTATGAAGAATCACATTTTATTAGTCATGATATACATAATGATGTTGATAGCCGTGTCGATATTAACTCAGATTCATACCAAGAACCAGATAATTCATTACATGTAGATATTGAAACGAATGTTGAAGGTCATCACCAACAGCAATTTATTAGCCCTGATTCAGAAATCTCAGAGAATTCAACCATACAGATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAACATCAACAAGACGAACAACATTCTGAAGCTGATTTATTAATTTCTAGTCCGAATCGTTCAGTCTCACCAAATTACAATATTGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAGATAGGATTATGTTGGGGATGATATTGT]


>consensus_10629#0 TGAAAAAGAAGAACAAGTCAATAATCTTGATAATATACAATATCGTGATGATGTTATAGA TCATTCTTTTCAACCATACAATATCCAAACTCATGCACACCTAGATGAAGAGAATGAGGA AGAAAACTTAGAAAAATCGTCTCCAGAACTATTGACAAAGTATGAAGAGAATTACACACC TAAATCCATTAAAAATTGTTATGAACAAAAACATGAACAATGTCTACCAGATCAAGAAAC ACATATTGAAATGAATTATCTACAATTGGATCAACATAAACCAATTGAAGAAACTAATTC AGATATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATAC TGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGG TATAACAACTGATGACTATAATAGAACAATGAATTCCCATGAAATTCACTCACACCAAAA TATTGAATTAGAGGTTGAAAATGTTTCTTTAGAACATGATATTACAAATGCTCAAGATGA TGAGATGATACCAGATTATTCATTACTTAGTATGGCAACAAATTATCCTAGTGATCCTAC TAAATATCAAGTTGATTCAAGTACAGATCAAATAATAAATACTAATCAGACTCTAGAAGG ATTTTCATACAATAATCATCATCTGTCAAATGAAACAGATTTTGCTATTCAAAGAAAAGT TGAAGCAAGTGAAACTGACGAAGAATCATATCAAAAAGTAGATTCGACAACCTATGAAGA ATCACATTTTATTAGTCATGATATACATAATGATGTTGATAGCCGTGTCGATATTAACTC AGATTCATACCAAGAACCAGATAATTCATTACATGTAGATATTGAAACGAATGTTGAAGG TCATCACCAACAGCAATTTATTAGCCCTGATTCAGAAATCTCAGAGAATTCAACCATACA GATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAACATCAACAAGACGAACAACA TTCTGAAGCTGATTTATTAATTTCTAGTCCGAATCGTTCAGTCTCACCAAATTACAATAT TGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAGATAGGATTATGTTGGGGAT GATATTGT



consensusID : consensus_10629#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 602
fasta sequence
                              [TAACCATCCTTTCATGGAATTTTTTGATAGTAAATTAAATCCAAGTGTTTATTCTGATGATATAATAAATCGTGATATGAGAGCTAAACCTGCCTTTGAAGCGATAAATGGTCTACAAACTAATGGATTACGATCTTATATGAATTGGCAACCAGCAGTCATCGGTTCAGTCTGTGCAGCATTGGGTGTATTGGTGATAGCAGCAATAGGAACAGCCTATCAGAAACGTAAACTATGGAAACAATCCCGCTTGAGTCAAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCACTAT-CAACATCAAAAGCAACAAATGTTAGCTCTAGAAAAAGTTAATGATCATACTAGAATAAGTGATGAAGATGACAGTGAAGATGATGTGGATGATGGAGATTTTACAGTTTATGAATGTCCAGGGCTCGCTAATNCTGGTGAAATCGAAGTCGAAANTCCTTNCTTTGATNGTGATAATNCTCCAAAGAATAATAACGATAATAATAAT-CTGGTGGAGAGANAGCGTTGAATACNANTGG]

[+] EMBL CD202149             [TAACCATCCTTTCATGGAATTTTTTGATAGTAAATTAAATCCAAGTGTTTATTCTGATGATATAATAAATCGTGATATGAGAGCTAAACCTGCCTTTGAAGCGATAAATGGTCTACAAACTAATGGATTACGATCTTATATGAATTGGCAACCAGCAGTCATCGGTTCAGTCTGTGCAGCATTGGGTGTATTGGTGATAGCAGCAATAGGAACAGCCTATCAGAAACGTAAACTATGGAAACAATCCCGCTTGAGTCAAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCACTAT CAACATCAAAAGCAACAAATGTTAGCTCTAGAAAAAGTTAATGATCATACTAGAATAA                                                                                                                                                                                     ]
[-] EMBL CD064533             [                  ATTTTTTGATAGTAAATTAAATCCAAGTGTTTATTCTGATGATATAATAAATCGTGATATGAGAGCTAAACCTGCTTTTGAAGCGATAAATGGTCTACAAACTAATGGATTACGATCTTATATGAATTGGCAACCAGCAGTCATCGGTTCAGTCTGTGCAGCATTGGGTGTATTGGTGATAGCAGCAATAGGAACAGCCTATCAGAAACGTAAACTATGGAAACAATCCCGCTTGAGTCAAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCACTAT CAACATCAAAAGCAACAAATGTTAGCTCTAGAAAAAGTTAATGATCATACTAGAATA                                                                                                                                                                                      ]
[+] EMBL CD193007             [                                                                                                                                                             GTCATCGGTTCAGTCTGTGCAGCATTGGGTGTATTGGTGATAGCAGCAATAGGAACAGCCTATCAGAAACGTAAACTATGGAAACAATCCCGCTTGAGTCAAGATGAAGAATTTACATTAGAGAATTCAAATTTGCCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCACTAT CAACATCAAAAGCAACAAATGTTAGCTCTAGAAAAAGTTAATGATCATACTAGAATAAGTGATGAAGATGACAGTGAAGATGATGTGGATGATGGAGATTTTA                                                                                                                                        ]
[+] EMBL CD193010             [                                                                                                                                                             GTCATCGGTTCAGTCTGTGCAGCATTGGGTGTATTGGTGATAGCAGCAATAGGAACAGCCTATCAGAAACGTAAACTATGGAAACAATCCCGCTTGAGTCAAGATGAAGAATTTACATTAGAGAATTCAAATTTGCCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCACTAT CAACATTCAAAGCCACAAATGGTAGCTCTAGAAAAAGGTAATGATCATACTANAATAAGTGATGAAGATGACAGTGAAGATGATGTGGATGATGGAGAATTTA                                                                                                                                        ]
[-] EMBL CD186782             [                                                                                                                                                                                       GGGTGTATTGGTGATAGCAGCAATAGGAACAGCCTATCAGAAACGTAAACTATGGAAACAATCCCGCTTGAGTCAAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCACTAT CAACATCAAAAGCAACAAATGTTAGCTCTAGAAAAAGTTAATGATCATACTAGAATAAGTGATGAAGATGACACTGAAGATGATGTGca                                                                                                                                                      ]
[+] EMBL AA629482             [                                                                                                                                                                                                                        CTATCAAAAACGTNAACTATGGAAACAATCCCGCTTGAGTCAAGATGAAGANTTTACATTAGAGAATTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCACTATCCNACATCAAAAGCANCGAATGTTAGCTCTAGAAAAAGTTAATGATCATNCTTTANTAAGTGATGAAGATGACTGTGAAGATGATGTGGATGATGGAGATTTTNCAGTTTATGAATGTCCAGGGCTCGCTAATNCTGGTGAAATCGAAGTCGAAANTCCTTNCTTTGATNGTGATAATNCTCCAAAGAATAATAACGATAATAATAAT CTGGTGGAGAGANAGCGTTGAATACNANTGG]
[+] EMBL CD184877             [                                                                                                                                                                                                                                                                                                                                                                        CTAT CAACATCAAAAGCAACAAATGTTAGCTCTAGAAAAAGTTAATGATCATACTAGAATAAGTGATGAAGATGACAGTGAAGATGATGTGGATGATGGAGATTTTACAGTTTATGAATGTCCAGGGCTCGCTAATACTGGTGAAATCGAAGTCGAAAATCCTTTCTTTGATAGTGATAATAATAAAAAGAATAATAACGATAATAATAATAATGGTGGAGAGAAAGCGTTGAATA       ]


>consensus_10629#1 TAACCATCCTTTCATGGAATTTTTTGATAGTAAATTAAATCCAAGTGTTTATTCTGATGA TATAATAAATCGTGATATGAGAGCTAAACCTGCCTTTGAAGCGATAAATGGTCTACAAAC TAATGGATTACGATCTTATATGAATTGGCAACCAGCAGTCATCGGTTCAGTCTGTGCAGC ATTGGGTGTATTGGTGATAGCAGCAATAGGAACAGCCTATCAGAAACGTAAACTATGGAA ACAATCCCGCTTGAGTCAAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAGACAA GATGCTGTCACTTAGTTCGGAGGATGATCGTAAACTTGCACAGTCAGCACAGATGTATCA CTATCAACATCAAAAGCAACAAATGTTAGCTCTAGAAAAAGTTAATGATCATACTAGAAT AAGTGATGAAGATGACAGTGAAGATGATGTGGATGATGGAGATTTTACAGTTTATGAATG TCCAGGGCTCGCTAATNCTGGTGAAATCGAAGTCGAAANTCCTTNCTTTGATNGTGATAA TNCTCCAAAGAATAATAACGATAATAATAATCTGGTGGAGAGANAGCGTTGAATACNANT GG



consensusID : consensus_10629#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 579
fasta sequence
                              [TTGAGCATTTGTAATATCATGTTCTAAGGAAACATTTTCAACCCCTGTATTCAGAAATCTCAGAGAATTCAACCATACAGATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAACATCAACAAGACGAACAACATTCTGAAGCTGATTTATTAATTTCTAGCCCGAATCGTTCAGTCTCACCAAATTACAATATTGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAGATAAGGATTATGTTGGGGATGATATTGTCGTGTATCATAATGATGCCGTAATAATGAATAAAGAGTCAGAAATAGATCTTCATCAGGATCAGCATTATCAACAATTTGATGTAGATGAAAAACTGCTTAATAATTCTACATTAAATAGATTTTCAAACTATTCTAACAGCGTCCACCAACAACATCATGTTTATTCAGAGATCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAATGACGATGATGATGTCAACAAATGTTGATGTGAATAATAATAATAATAATAATAATGGTGGAGAGAAAGCGTTGAATACGAGTGGCAGCTCAGGTGAAT]

[+] EMBL CD197642             [TTGAGCATTTGTAATATCATGTTCTAAGGAAACATTTTCAACCCCTGTATTCAGAAATCTCAGAGAATTCAACCATACAGATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAACATCAACAAGACGAACAACATTCTGAAGCTGATTTATTAATTTCTAGCCCGAATCGTTCAGTCTCACCAAATTACAATATTGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAGATAAGGATTATGTTGGGGATGATATTGTCGTGTATCATAATGATGCCGTAATAATGAATAAAGAGTCAGAAATAGATCTTCATCAGGATCAGCATTATCAACAATTTGATGTAGATGAAAAACTGCTTAATAATTCTACATTAAATAGATTTTCAAACTATTCTAACAGCGTCCACCAACAACATCATGTTTATTCAGAGATCCCGACCGATTACAG                                                                                                                          ]
[+] EMBL BG930244             [                                                                               GATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAACATCAACAAGACGAACAA ATTCTGAAGCTGATTTATTAATTTCGACCCC                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD119173             [                                                                                                      acatcCAGGAATGTGAACATCAACAAGACGAACAACATTCTGAAGCTGATTTATTAATTTCTAGCCCGAATCGTTCAGTCTCACCAAATTACAATATTGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAGATAAGGATTATGTTGGGGATGATATTGTCGTGTATCATAATGATGCCGTAATAATGAATAAAGAGTCAGAAATAGATCTTCATCAGGATCAGCATTATCAACAATTTGATGTAGATGAAAAACTGCTTAATAATTCTACATTAAATAGATTTTCAAACTATTCTAACAGCGTCCACCAACAACATCATGTTTATTCAGAGATCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAAT                                                                                                  ]
[+] EMBL CD186821             [                                                                                                                                                                                                                                                                         TGTCGTGTATCATAATGATGCCGTAATAATGAATAAAGAGTCAGAAATAGATCTTCATCAGGATTAGCATTATCAACAATTTGATGTAGATGAAAAACTGCTTAATAATTCTACATTAAATAGATTTTCAAACTATTCTAACAGCGTCCACCAACAACATCATGTTTATTCAGAGATCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAATGACGATGATGATGTCAACAAATGTTGATGTGAATAATAATAATAATAATAATAATGGTGGAGAGAAAGCGTTGAATACGAGTGGCAGCTCAGGTGAAT]


>consensus_10629#2 TTGAGCATTTGTAATATCATGTTCTAAGGAAACATTTTCAACCCCTGTATTCAGAAATCT CAGAGAATTCAACCATACAGATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAAC ATCAACAAGACGAACAACATTCTGAAGCTGATTTATTAATTTCTAGCCCGAATCGTTCAG TCTCACCAAATTACAATATTGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAG ATAAGGATTATGTTGGGGATGATATTGTCGTGTATCATAATGATGCCGTAATAATGAATA AAGAGTCAGAAATAGATCTTCATCAGGATCAGCATTATCAACAATTTGATGTAGATGAAA AACTGCTTAATAATTCTACATTAAATAGATTTTCAAACTATTCTAACAGCGTCCACCAAC AACATCATGTTTATTCAGAGATCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAA TGACGATGATGATGTCAACAAATGTTGATGTGAATAATAATAATAATAATAATAATGGTG GAGAGAAAGCGTTGAATACGAGTGGCAGCTCAGGTGAAT



consensusID : consensus_10629#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 259
fasta sequence
                              [TACTGGTGAAATCGAAGTCGAAAATCCTTTCTTTGATAGTGATAATAATAACAAAGAATAATAACGATAATAATAATAATGGTGGAGAGAAAGCGTTGAATACGAGTGGCAGCTCAGGTGAATTGATTGGTTGCAGTGATTTAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGGAAACTTGCACAGTCAGCACAGATGTATCACTATCAACATCAAAA]

[+] EMBL CD183407             [TACTGGTGAAATCGAAGTCGAAAATCCTTTCTTTGATAGTGATAATAATAACAAAGAATAATAACGATAATAATAATAATGGTGGAGAGAAAGCGTTGAATACGAGTGGCAGCTCAGGTGAATTGATTGGTTGCAGTGATTTAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGATGATCGGAAACTTGCACAGTCAGCACAGATGTATCACTATCAACATCAAAA]


>consensus_10629#3 TACTGGTGAAATCGAAGTCGAAAATCCTTTCTTTGATAGTGATAATAATAACAAAGAATA ATAACGATAATAATAATAATGGTGGAGAGAAAGCGTTGAATACGAGTGGCAGCTCAGGTG AATTGATTGGTTGCAGTGATTTAGATGAAGAATTTACATTAGAGAATTCAAATTTACCAG ACAAGATGCTGTCACTTAGTTCGGAGGATGATCGGAAACTTGCACAGTCAGCACAGATGT ATCACTATCAACATCAAAA



consensusID : consensus_10629#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 235
fasta sequence
                              [TGAACAATTTGATGTAGATGAAAAACTGCTTAATAATTCTACATTAAATAGATTTTCAAACTATTCTAACAGCGTCCACCAACAACATCATGTTTATTCAGAGATCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAATGACGATGATGATGTCAACAAATGTTGATGTGAATAATAATAATAATAATAATAATGATGTCACCACTGATGACACTACTACTACTACTGGT]

[+] EMBL CD067492             [TGAACAATTTGATGTAGATGAAAAACTGCTTAATAATTCTACATTAAATAGATTTTCAAACTATTCTAACAGCGTCCACCAACAACATCATGTTTATTCAGAGATCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAATGACGATGATGATGTCAACAAATGTTGATGTGAATAATAATAATAATAATAATAATGATGTCACCACTGATGACACTACTACTACTACTGGT]


>consensus_10629#4 TGAACAATTTGATGTAGATGAAAAACTGCTTAATAATTCTACATTAAATAGATTTTCAAA CTATTCTAACAGCGTCCACCAACAACATCATGTTTATTCAGAGATCCCGACCGATGACAG TGCAGAAACAATGATGCCAAGAATGACGATGATGATGTCAACAAATGTTGATGTGAATAA TAATAATAATAATAATAATGATGTCACCACTGATGACACTACTACTACTACTGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TGAAAAAGAAGAACAAGTCAATAATCTTGATAATATACAATATCGTGATGATGTTATAGA 60
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TCATTCTTTTCAACCATACAATATCCAAACTCATGCACACCTAGATGAAGAGAATGAGGA 120
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      AGAAAACTTAGAAAAATCGTCTCCAGAACTATTGACAAAGTATGAAGAGAATTACACACC 180
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TAAATCCATTAAAAATTGTTATGAACAAAAACATGAACAATGTCTACCAGATCAAGAAAC 240
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      -----------------TTGAGCATTTGTAATATCATGTTCTAAGGAAACATTTTCAACC 43
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      ACATATTGAAATGAATTATCTACAATTGGATCAACATAAACCAATTGAAGAAACTAATTC 300
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      CCTGTATTCAGAAATCTCAGAGAATTCAACCATACAGATGCAGCAGCACCATGACGAACA 103
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      AGATATTGATGAAATGGAAAAAGAATTTGTCATACCATATCAACAAAAACAAATCAATAC 360
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      TGTACAGGAATGTGAACATCAACAAGACGAACAACATTCTGAAGCTGATTTATTAATTTC 163
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TGAATATGATGAATCCTTTTTAAGTCATACAAATATTGATGATAATAACATGAATGATGG 420
consensus_10629#1      TAACCATCCTTTCATGGAATTTTTTGATAGTAAATTAAATCCAAGTGTTTATTCTGATGA 60
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      TAGCCCGAATCGTTCAGTCTCACCAAATTACAATATTGTCAGTTCGACACAACAACATTC 223
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TATAACAACTGATGACTATAATAGAACAATGAATTCCCATGAAATTCACTCACACCAAAA 480
consensus_10629#1      TATAATAAATCGTGATATGAGAGCTAAACCTGCCTTTGAAGCGATAAATGGTCTACAAAC 120
consensus_10629#3      ---------------------------------------------------------TAC 3
                                                                                   

consensus_10629#2      AAATGAAGAAGAAGAAGATAAGGATTATGTTGGGGATGATATTGTCGTGTATCATAATGA 283
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TATTGAATTAGAGGTTGAAAATGTTTCTTTAGAACATGATATTACAAATGCTCAAGATGA 540
consensus_10629#1      TAATGGA-TTACGATCTTATATGAATTGGCAACCAGCAGTCATCGGTTCAGTCTGTGCAG 179
consensus_10629#3      TGGTGAAATCGAAGTCGAAAATCCTTTCTTTGATAGTGATAATAATAACAA--AGAATAA 61
                                                                                   

consensus_10629#2      TGCCGTAATAATGAATAAAGAGTCA---------GAAATAGATCTTCATCAGGATCAGCA 334
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TGAGATGATACCAGATTATTCATTACTTAGTATGGCAACAAATTATCCTAGTGATCCTAC 600
consensus_10629#1      CATTGGGTGTATTGGTGATAGCAGCA-----ATAGGAACAGCCTATCAGAAACGTAAACT 234
consensus_10629#3      TAACGATAATAATAATAATGGTGGAG-----AGAA-AGCGTTGAATACGAGTGGCAGCTC 115
                                                                                   

consensus_10629#2      TTATCAACAATTTGAT------GTAGATGAAAAACTGCTTAATAATTCTACATTAAATAG 388
consensus_10629#4      ---TGAACAATTTGAT------GTAGATGAAAAACTGCTTAATAATTCTACATTAAATAG 51
consensus_10629#0      TAAATATCAAGTTGATTCAAGTACAGATCAAATAATAAATACTAATCAGACTCTAGAAGG 660
consensus_10629#1      ATGGAAACAATCCCGC------TTGAGTCA------AGATGAAGAATTTACATTAGAGAA 282
consensus_10629#3      AGGTGAATTGATTGGT------TGCAGTGAT---TTAGATGAAGAATTTACATTAGAGAA 166
                            *                     * *         *    *    **  ** *   

consensus_10629#2      ATTTTCAAACTATTCTAACAGCGT-CCACCAACAACATCATGTTT----ATTCAGAGA-- 441
consensus_10629#4      ATTTTCAAACTATTCTAACAGCGT-CCACCAACAACATCATGTTT----ATTCAGAGA-- 104
consensus_10629#0      ATTTTCATACAAT--AATCATCAT-CTGTCAAATGAAACAGATTTTGCTATTCAAAGAAA 717
consensus_10629#1      ---TTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGAT---GATCGTAAACT 336
consensus_10629#3      ---TTCAAATTTACCAGACAAGATGCTGTCACTTAGTTCGGAGGAT---GATCGGAAACT 220
                          **** *         **   * *   **       *            **  * *  

consensus_10629#2      --TCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAATGACGAT-GATGATGTCAA 498
consensus_10629#4      --TCCCGACCGATGACAGTGCAGAAACAATGATGCCAAGAATGACGAT-GATGATGTCAA 161
consensus_10629#0      AGTTGAAGCAAGTGAAACTG-ACGAAGAATCATATCAAAAAGTAGATTCGACAACCTATG 776
consensus_10629#1      T-GCACAGTCAGCACAGATGTATCACTATCAACATCAAAAGCAACAAATGTTAGCTCTAG 395
consensus_10629#3      T-GCACAGTCAGCACAGATGTATCACTATCAACATCAAAA-------------------- 259
                                         ** *  *  *   *   *** *                    

consensus_10629#2      CAAATGTTGATGTGAATAATAATAATAATAATAATAATGGTG-GAGAGAAAGCGTTGAAT 557
consensus_10629#4      CAAATGTTGATGTGAATAATAATAATAATAATAATAATGATG-TCACCAC--TGATGA-C 217
consensus_10629#0      AAGAATCACATTTTATTAGTCATGATATACATAATGATGTTGATAGCCGTGTCGATATTA 836
consensus_10629#1      AAAAAGTTAATGATCATACTAGAATAAGTGATGAAGATGACAGTGAAGATGATGTGGATG 455
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ACGAGTGGCAGCTCAGGTGAAT-------------------------------------- 579
consensus_10629#4      ACTACTACTACTACTGGT------------------------------------------ 235
consensus_10629#0      ACTCAGATTCATACCAAGAACCAGATAATTCATTACATGTAGATATTGAAACGAATGTTG 896
consensus_10629#1      ATGGAGATTTTACAGTTTATGAATGTCCAGGGCTCGCTAATNCTGGTGAAATCGAAGTCG 515
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      AAGGTCATCACCAACAGCAATTTATTAGCCCTGATTCAGAAATCTCAGAGAATTCAACCA 956
consensus_10629#1      AAANTCCTTNCTTTGATNGTGATAATNCTCCAAAGAATAATAACGATAATAATAATCTGG 575
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      TACAGATGCAGCAGCACCATGACGAACATGTACAGGAATGTGAACATCAACAAGACGAAC 1016
consensus_10629#1      TGGAGAGANAGCGTTGAATACNANTGG--------------------------------- 602
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      AACATTCTGAAGCTGATTTATTAATTTCTAGTCCGAATCGTTCAGTCTCACCAAATTACA 1076
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------------------------------------------------------
consensus_10629#4      ------------------------------------------------------------
consensus_10629#0      ATATTGTCAGTTCGACACAACAACATTCAAATGAAGAAGAAGAAGATAGGATTATGTTGG 1136
consensus_10629#1      ------------------------------------------------------------
consensus_10629#3      ------------------------------------------------------------
                                                                                   

consensus_10629#2      ------------
consensus_10629#4      ------------
consensus_10629#0      GGATGATATTGT 1148
consensus_10629#1      ------------
consensus_10629#3      ------------
                                   




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)