These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10632#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 937 fasta sequence [GATCATTATCGGACGAAGAACAAAGGACTGAAACGGCTCGTTTTATTACCCGCACGCTGACGGAGGCTCTGCTGGCTGTTACGACCGAACTTATTGACGGCATAGTAGAAGAAGTAATGACAGAAGCGGTTTCAGGGAAATCACATGTTCTACCATCAGAAGACTCTCCATCTGTCGAGATAAAATCCCCAATTCTAGGTTTGGTCTCTTATAATAGTGAAAGTGAGTCAGAATCTGAGCAAAACGTGTTGGAAAGTAAACTACCCACAAATAAGTTATCAGGTATACTACCAGGTGATGTTCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAATAATAAAATTGTCACTGGAAATGGGAAATTTCAAACTGCACAAGAAAAGAATCATGAAAAGCATTCTTATTCCTCCAGCATTCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGATATGGCGGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTNTGCGAAGTCCAGTCATTCGAAACATTCTCATCATANAAGTCACCATTNAGATTGTACACTTTCCTGTATTTAAGTGTAACCCCTGTCTCGTTNGCACTTNATATCCTTAGTCACAGTGAGAATTCAGACAGGGTATTTATCATTTGGTATGAAATATTCGTTNCCCCACACACACTGCTCATAGAACTAANTNCTTTNATTAAATAGGGTACAGTACCATCATTGTCTACTAAATAT] [+] EMBL CD081279 [GATCATTATCGGACGAAGAACAAAGGACTGAAACGGCTCGTTTTATTACCCGCACGCTGACGGAGGCTCTGCTGGCTGTTACGACCGAACTTATTGACGGCATAGTAGAAGAAGTAATGACAGAAGCGGTTTCAGGGAAATCACATGTTCTACCATCAGAAGACTCTCCATCTGTCGAGATAAAATCCCCAATTCTAGGTTTGGTCTCTTATAATAGTGAAAGTGAGTCAGAATCTGAGCAAAACGTGTTGGAAAGTAAACTACCCACAAATAAGTTATCAGGTATACTACCAGGTGATGTTCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAATAATAAAATTGTCACTGGAAATGGGAAATTTCAAACTGCACAAGAAAAGAATCATGAAAAGCATTCTTATTCCTCCAGCATTCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGATATGGCGGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTNTGCGAAGTCCAGTCATTCGAAACATTCTCATCATANAAGTCACCATTNAGATTGTACACTTTCCTGTATTTAAGTGTAACCCCTGTCTCGTTNGCACTTNATATCCTTAGTCACAGTGAGAATTCAGACAGGGTATTTATCATTTGGTATGAAATATTCGTTNCCCCACACACACTGCTCATAGAACTAANTNCTTTNATTAAATAGGGTACAGTACCATCATTGTCTACTAAATAT] consensusID : consensus_10632#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 867 fasta sequence [CCCTGCTCGAGGGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTAAGTGAATTTAATGACTTTCAAATCAAATCTATTTTCTGATGATTGACTTAACAATAGTAACATGTTATTTTATTCATCTTGTTTCGGCAGTACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGCCCACAGTACGCACTTTTGGAAAGCAAGTTTATACTCTTCATTTTGGGTCGGCATACAATAATTATTCATATTTATGGTGTTTGTTATTTGGTACAGAAGAAATGTTTAAGTCCTAGATACATCTATTTTTTTGTTACAGATTTTACACTCGTTATTGTCCTATTCATTTTCATCTTTTCAACTGTCTCCTTGACAATTTTGTTTCCAATACTTTCTTGCAAATGTTCTCACTAACAGCAAACGAACTGATGATCTCCTACGGGACTTCGTGTTCCGGTATTGAATAATATTACTGCTATAATTAGGCAGAGTACTGTACACAGAAGCCAGTTTACTAATCAAATCTTTCTCATACAGTTACTCTCAAGTTTATCTGTCTATTTTTCCTATCATTATTCTGTTCAACTTACTGANCATATTTCAAGTAAATCTTAAATAGAGTATCTATTTTTTGAAAATTATTAAATTCACCTTCTTCAGTCAGTATTTGCGTCCCTATTATCGNNCATTGTCTTACTTTTAGTATGAANTATTCGTTNCCACACACACTGCTCAATGAACTAATTCTTTTATAAAAATGNGACAAGACCATCATTGCTACTTAA] [+] EMBL CD082158 [CCCTGCTCGAGGGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTAAGTGAATTTAATGACTTTCAAATCAAATCTATTTTCTGATGATTGACTTAACAATAGTAACATGTTATTTTATTCATCTTGTTTCGGCAGTACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGCCCACAGTACGCACTTTTGGAAAGCAAGTTTATACTCTTCATTTTGGGTCGGCATACAATAATTATTCATATTTATGGTGTTTGTTATTTGGTACAGAAGAAATGTTTAAGTCCTAGATACATCTATTTTTTTGTTACAGATTTTACACTCGTTATTGTCCTATTCATTTTCATCTTTTCAACTGTCTCCTTGACAATTTTGTTTCCAATACTTTCTTGCAAATGTTCTCACTAACAGCAAACGAACTGATGATCTCCTACGGGACTTCGTGTTCCGGTATTGAATAATATTACTGCTATAATTAGGCAGAGTACTGTACACAGAAGCCAGTTTACTAATCAAATCTTTCTCATACAGTTACTCTCAAGTTTATCTGTCTATTTTTCCTATCATTATTCTGTTCAACTTACTGANCATATTTCAAGTAAATCTTAAATAGAGTATCTATTTTTTGAAAATTATTAAATTCACCTTCTTCAGTCAGTATTTGCGTCCCTATTATCGNNCATTGTCTTACTTTTAGTATGAANTATTCGTTNCCACACACACTGCTCAATGAACTAATTCTTTTATAAAAATGNGACAAGACCATCATTGCTACTTAA] consensusID : consensus_10632#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 851 fasta sequence [TGTTCTACCATCAGAAGACTCTCCATCTGTCGAGATAAATCCCCAATTCTAGGTTTGGTCTCTTATAATAGTGAAAGTGAGTCAGAATCTGAGCAAAACGTGTTGGAAAGTAAACTACCCACAAATAAGTTATCAGGTATACTACCAGGTGATGTTCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAGTAAGTTTATTTAATTAATGAGGTAACTTTTTATACTCGTCTGCGAATC-TTAGAAACCGTTGATGAAAATCGTTGGACCATGGATGTTCATGTAAATCTCATACAATTGATCATCTCTCCTATAACTCCAACACTTAGCTGATGGTGATATCCTTGTCTGTCGAACCTTAATTCATGATGTCGTTACATAACATGTTCGATTGTTTATATATATCGCACTACTGTCTCCCTTCATTTTGGTAATGAGTGAAATCTTTGAAAAACATTGTCTCAGTCAGTTTTATTTATAATTATACATCTGTGATTTTTATTATCTGGGAAATCATGCCTCTCATTCCTATGCTTCAAATTCAAGTGTTAATCAGCTATCGTGGGTCGTGGGTGCGATAAAAATGATTTCAAGTGGGCCTTTTTTTTCTTCCTAGGATTGTTTTGCGTAGTTTAACATTCTGTCCAATAAAAATCTAATAACTTGATGTAGTGATCAACTAAGTCAATCACTATGATCGTTGAGTATAGGTTTTTCTGGCCTTTTAATGTTCAATGAATTCTGGGAGCATTTAGAGTACTCTGCATATTTTTAGACAGCTTTTCTAATAATTTCATCGACATTTCATTCTACAGCTTAACAAATGCTTTAGNC] [+] EMBL CD061062 [TGTTCTACCATCAGAAGACTCTCCATCTGTCGAGATAAATCCCCAATTCTAGGTTTGGTCTCTTATAATAGTGAAAGTGAGTCAGAATCTGAGCAAAACGTGTTGGAAAGTAAACTACCCACAAATAAGTTATCAGGTATACTACCAGGTGATGTTCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAGTAAGTTTATTTAATTAATGAGGTAACTT ] [+] EMBL CD181752 [ GTTGGAAAGTAAACTACCCACAAATAAGTTATCAGGTATACTACCAGGTGATGTTCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAGTAAGTTTATTTAATTAATGAGGTAACTTTTTATACTCGTCTGCGAATC TTAGAAACCGTTGATGAAAATCGTTGGACCATGGATGTTCATGTAAATCTCATACAATTGATCATCTCTCCTATAACTCCAACACTTAGCTGATGGTGATATCCTTGTCTGTCGAACCTTAATTCATGATGTCGTTACATAACATGTTCGATTGTTTATATATATCGCACTACTGTCTCCCTTCATTTTGGTAATGAGTGAAATCTTTGNAAAACATTG ] [-] EMBL CD181292 [ gnnAAAGTAAACTANCCACNAATTAGTATTCAGGTATACTACCAGGTGATGTTCCTGATGATGTAAAACATGACTATACATCACAGNATAGTCNTAGTAATG AAGT AGTTTATTTTATTAATGAGGTACTTTTTTATACTCGTCTGCG ATCTTTAGAAACCGTTGATGAAAATCGTTGGACCATGGATGTTCATGTAAATCTCATACAATTGATCATCTCTCCTATAACTCCAACACTTAGCTGATGGTGATATCCTTGTCTGTCGAACCTTAATTCATGATGCCGTTACATAACATGTTCGATTGTTTATATATCTCGCACTACTGTCTCCCTTCATTTTGGTAATGAGTGAAATCTTTGAAAAACATTGTCTCAGTCAGTTTTATTTATAATTATACATCTGTGATTTTTATTATCTGGGAAATCATGCCTCTCATTCCTATGCTTCAAATTC ] [-] EMBL CD181740 [ TCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAGTAAGTTTA TTAATTAATGAGGTAACTTTTTATACTCGTCTGCGAATC TTAGAAACCGTTGATGAAAATCGTTGGACCATGGATGTTCATGTAAATCTCATACAATTGATCATCTCTCCTATAACTCCAACACTTAGCTGATGGTGATATCCTTGTCTGTCGAACCTTAATTCATGATGTCGTTACATAACATGTTCGATTGTTTATATATATCGCACTACTGTCTCCCTTCATTTTGGTAATGAGTGAAATCTTTGAAAAACATTGTCTCAGTCAGTTTTATTTATAATTATACATCTGTGATTTTTATTATCTGGGAAATCATGCCTCTCATTCCTATGCTTCAAATTC ] [-] EMBL CD181390 [ tannGTAATGAAAGTAAG TTATTTAATTAATGAGGTAAC TTTTATACTCGTCTGCGAATC TTAGAAACCGTTGATGAAAATCGTTGGACCATGGATGTTCATGTAAATCTCATACAATTGATCATCTCTCCTATAACTCCAACACTTAGCTGATGGTGATATCCTTGTCTGTCGAACCTTAATTCATGATGTCGTTACATAACATGTTCGATTGTTTATATATATCGCACTACTGTCTCCCTTCATTTTGGTAATGAGTGAAATCTTCGAAAAACATTGTCTCAGTCAGTTTTATTTATAATTATACATCTGTGATTTTTATTATCTGGGAAATCATGCCTCTCATTCCTATGCTTCAAATTC ] [-] EMBL CD194720 [ TCTCAGTCAGTTTTATTTATAATTATACATCTGTGATTTTTATTATCTGGGAAATCATGCCTCTCATTCCTATGCTTCAAATTCAAGTGTTAATCAGCTATCGTGGGTCGTGGGTGCGATAAAAATGATTTCAAGTGGGCCTTTTTTTTCTTCCTAGGATTGTTTTGCGTAGTTTAACATTCTGTCCAATAAAAATCTAATAACTTGATGTAGTGATCAACTAAGTCAATCACTATGATCGTTGAGTATAGGTTTTTCTGGCCTTTTAATGTTCAATGAATTCTGGGAGCATTTAGAGTACTCTGCATATTTTTAGACAGCTTTTCTAATAATTTCATCGACAT ] [+] EMBL CD166167 [ AAAATGATTTCAAGTGTTTTTCTTTTTTCTTCCTAGGATTGTTTTGCGTAGTTTAACATTCTGTCCAATAAAAATCTAATAACTTGATGTAGTGATCAACTAAGTCAATCACTATGATCGTTGAGTATAGGTTTTTCTGGCCTTTTAATGTTCAATGAATTCTGGGAGCATTTAGAGTACTCTGCATATTTTTAGACAGCTTTTCTAATAATTTCATCGACATTTCATTCTACAGCTTAACAAATGCTTTAGNC] consensusID : consensus_10632#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 777 fasta sequence [GGCCCTCGAGGCAGATTCGGCACGAGGCTGATGATTGACTTAACAATAGTACATGTTATTTTATTCATCTTGTTTCGGCAGTACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGCCCACAGTACGCACTTTTGGAAAGCAAGTTTATACTCTTCATTTTGGGTCGGCATACAATAATTATTCATATTTATGGTGTTTGTTATTTGGTACAGAAGAAATGTTTAAGTCCTAGATACATCTATTTTTTTGTTACAGATTTTACACTCGTTATTGTCCTATTCATTTTCATCTTTTCAACTGTCTCCTTGACAATTTTGTTTCCAATACTTTCTTGCAAATGTTCTCACTAACAGCAAACGAACTGATGATCTCCTACGGGACTTCGTGTTCCGGTATTGAATAATATTACTGCTATAATTAGGCAGAGTACTGTACACAGAAGCCAGTTTACTAATCAAATCTTTCTCATACAGTTACTCTCAAGTTTATCTGTCTATTTTTCCTATCATTATTCTGTTCAACTTACTGACAATATTTCAAGTAAATCTTAAAATAGAGTATCTATTTTTTGAAATTTATTAATTTCAACCTTCTTTCAGTCAGTAATTTGCGTTCCCTATTTATCGTCAATTTGTCTTTACTTTTCAGGTATGGAAATATTCGGTTTCCCAACAACACAACTGCTCATATGATCTTAATTTCTTTTTCATATAAATATGTGTACAAAGTACCAATCATTTGTCTACTTAAAAATAA] [+] EMBL CD084010 [GGCCCTCGAGGCAGATTCGGCACGAGGCTGATGATTGACTTAACAATAGTACATGTTATTTTATTCATCTTGTTTCGGCAGTACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGCCCACAGTACGCACTTTTGGAAAGCAAGTTTATACTCTTCATTTTGGGTCGGCATACAATAATTATTCATATTTATGGTGTTTGTTATTTGGTACAGAAGAAATGTTTAAGTCCTAGATACATCTATTTTTTTGTTACAGATTTTACACTCGTTATTGTCCTATTCATTTTCATCTTTTCAACTGTCTCCTTGACAATTTTGTTTCCAATACTTTCTTGCAAATGTTCTCACTAACAGCAAACGAACTGATGATCTCCTACGGGACTTCGTGTTCCGGTATTGAATAATATTAC ] [-] EMBL CD075774 [ ATACAATAATTATTCATATTTATGGTGTTTGTTATTTGGTACAGAAGAAATGTTTAAGTCCTAGATACATCTATTTTTTTGTTACAGATTTTACACTCGTTATTGTCCTATTCATTTTCATCTTTTCAACTGTCTCCTTGACAATTTTGTTTCCAATACTTTCTTGCAAATGTTCTCACTAACAGCAAACGAACTGATGATCTCCTACGGGACTTCGTGTTCCGGTATTGAATAATATTACTGCTATAATTAGGCAGAGTACTGTACACAGAAGCCAGTTTACTAATCAAATCTTTCTCATACAGTTACTCTCAAGTTTATCTGTCTATTTTTCCTATCATTATTCTGTTCAACTTACTGACAATATTTCAAGTAAATCTTAAAATAGAGTATCTATTTTTTGAAATTTATTAATTTCAACCTTCTTTCAGTCAGTAATTTGCGTTCCCTATTTATCGTCAATTTGTCTTTACTTTTCAGGTATGGAAATATTCGGTTTCCCAACAACACAACTGCTCATATGATCTTAATTTCTTTTTCATATAAATATGTGTACAAAGTACCAATCATTTGTCTACTTAAAAATAA] consensusID : consensus_10632#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 668 fasta sequence [GAGGGAATAGTCCTAGTAATGAAAATAATAAAATTGTCACTGGAAATGGGAAATTTCAAACTGCACAAGAAAAGAATCATGAAAAGCATTCTTATTCCTCCAGCATTCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGATATGGCGGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTAAGTGAATTTAATGACTTTCAAATCAAATCTATTTTCTGATGATTGACTTAACAATAGTAACATGTTATTNTATTCATCTTGTTTCGGCAGTACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGC] [+] EMBL CD083014 [GAGGGAATAGTCCTAGTAATGAAAATAATAAAATTGTCACTGGAAATGGGAAATTTCAAACTGCACAAGAAAAGAATCATGAAAAGCATTCTTATTCCTCCAGCATTCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGATATGGCGGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTAAGTGAATTTAATGACTTTCAAATCAAATCTATTTTCTGATGATTGACTTAACAATAGTAACATGTTATTNTATTCATCTTG ] [+] EMBL CD140754 [ TCTTATTCCTCCAGCATTCATCAGAAATCTAAACGCTAT AAAATGAAAAAGAAACGGATATGGCCGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTAAGTGAATTTAATGACTTTCAAATCAA ] [+] EMBL CD141958 [ CGTAAAAAAGATTTTCGTGGTTCGGCAACAGCTACTTCATAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTTAGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCAAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTAATAATCCTTAGTTCACAAGTGAGATTTCACACAGGTAATTTTATCATTTGGTAAGTGAATTTAATGACTTTCAAATCAAATCTATTTTCTGATGATTGACTTAACAATAGTAACATGTTATTTTATTCATCTTGTTTCGGCAGTACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGC] consensusID : consensus_10632#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 578 fasta sequence [TTTCAAACTGCACAAGAAAAGAATCATGAAAAGCATTCTTATTCCTCCAGCATTCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGATATGGCCGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTATGGAAATATTCGGTTTCCCAACAACACAACTGCTCATATGATCTTAATTTCTTTTTCATATAAATATGTGTACAAAGTACCAATCATTTGTCTACTTAAAAATAATCTA] [-] EMBL CD075108 [TTTCAAACTGCACAAGAAAAGAATCATGAAAAGCATTCTTATTCCTCCAGCATTCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGATATGGCGGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTATGGAAATATTCGGTTTCCCAACAACACAACTGCTCATATGATCTTAATTTCTTTTTCATATAAATATGTGTACAAAGTACCAATCATTTGTCTACTTAAAAATAATCTA] [+] EMBL AI067957 [ GGATATGGCCGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGT ] [+] EMBL AI068332 [ GATATGGCCGTCACAATTTCTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACAAATTCACGGCATTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGTATGGAAATATTCGGTTTCCCAACAACACAACTGCTCATATGATCTTAATTTCTTTTTCATATAAATATGTGTACAAA ] [+] EMBL AI067747 [ TTCGCATCGCAGTCGTAAAAGAGATTTTCGTGGTTCGTCAACAGCTTCTTCAGAATCTTCAAGTTCTAATCATGGGAACCAAAAAGTAGGATTCTCTCGATTCAGTCGATCCTCAGCAGACCACATTAAAAATGTTCGGTCACCAAAACATTATTTTGCGAAGTCCAGTCATTCGAAACATTCTCATCATAAAAGTCACCATTAGATTTGTACACTTTCCTGTATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTCAGACAGGTAATTTTATCATTTGGAATGGAAATATTCGGTTTCTCAACAACACAACTGCTCATATGATCATAATTTCTTTTTCACATAAATA ] consensusID : consensus_10632#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence [ACTGGCGGTAAATTTTTTTTAAGTAAACAAAGGATGGGTCCTTTGTCCCCATTTTTATTTGAAAAAAAAATTAATCATTTGACCAGTTGGGTTGTTGGGAAACCGAATTTTTCCTTACCTGAAAAGTAAAGACAAATTGGCGATAAATAGGGAACCCAAATTACTGGCTGAAAAAAGGGTGAAATTAATAAATTTCAAAAAATAAATCCTTTTTTTTAAAATTTACTTGAAATATTGGCAGTAAGTTGAACAAAATATTGATGGGAAAAATAGACAGATAACCTTGAAAGTAACTGTATGAAAAAA] [+] EMBL CD076599 [ACTGGCGGTAAATTTTTTTTAAGTAAACAAAGGATGGGTCCTTTGTCCCCATTTTTATTTGAAAAAAAAATTAATCATTTGACCAGTTGGGTTGTTGGGAAACCGAATTTTTCCTTACCTGAAAAGTAAAGACAAATTGGCGATAAATAGGGAACCCAAATTACTGGCTGAAAAAAGGGTGAAATTAATAAATTTCAAAAAATAAATCCTTTTTTTTAAAATTTACTTGAAATATTGGCAGTAAGTTGAACAAAATATTGATGGGAAAAATAGACAGATAACCTTGAAAGTAACTGTATGAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10632#0 GATCATTATCGGACGAAGAACAAAGGACTGAAACGGCTCGTTTTATTACCCGCACGCTGA 60 consensus_10632#5 ------------------------------------------------------------ consensus_10632#4 ------------------------------------------------------------ consensus_10632#1 ------------------------------------------------------------ consensus_10632#3 ------------------------------------------------------------ consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 ------------------------------------------------------------ consensus_10632#0 CGGAGGCTCTGCTGGCTGTTACGACCGAACTTATTGACGGCATAGTAGAAGAAGTAATGA 120 consensus_10632#5 ------------------------------------------------------------ consensus_10632#4 ------------------------------------------------------------ consensus_10632#1 -----------------------------CCCTGCTCGAGGGATTTGTACACTTTCCTGT 31 consensus_10632#3 ------------------------------------------------------------ consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 ------------------------------------------------------------ consensus_10632#0 CAGAAGCGGTTTCAGGGAAATCACATGTTCTACCATCAGAAGACTCTCCATCTGTCGAGA 180 consensus_10632#5 ------------------------------------------------------------ consensus_10632#4 ------------------------------------------------------------ consensus_10632#1 ATTAAGTGTTAACCTGTCTTCGGTTTGCACTTATAATCCTTAGTTCACAAGTGAGATTTC 91 consensus_10632#3 ------------------------------------------------------------ consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 -------------------------TGTTCTACCATCAGAAGACTCTCCATCTGTCGAGA 35 consensus_10632#0 TAAAATCCCCAATTCTAGGTTTGGTCTCTTATAATAGTGAAAGTGAGTCAGAATCTGAGC 240 consensus_10632#5 ------------------------------------------------------------ consensus_10632#4 ------------------------------------------------------------ consensus_10632#1 AGACAGGTAATTTTATCATTTGGTAAGTGAATTTAATGACTTTCAAATCAAATCTATTTT 151 consensus_10632#3 -------------------------------------GGCCCTCGAGGCAGATTCGGCAC 23 consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 TAA-ATCCCCAATTCTAGGTTTGGTCTCTTATAATAGTGAAAGTGAGTCAGAATCTGAGC 94 consensus_10632#0 AAAACGTGTTGGAAAGTAAACTACCCACAAATAAGTTATCAGGTATACTACCAGGTGATG 300 consensus_10632#5 ------------------------------------------------------------ consensus_10632#4 ------------------------------------------------------------ consensus_10632#1 ----CTGATGATTGACTTAACAATAGTAACATGTTATTTTATTCATCTTGTTTCGGCAGT 207 consensus_10632#3 GAGGCTGATGATTGACTTAACAATAGTA-CATGTTATTTTATTCATCTTGTTTCGGCAGT 82 consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 AAAACGTGTTGGAAAGTAAACTACCCACAAATAAGTTATCAGGTATACTACCAGGTGATG 154 consensus_10632#0 TTCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAATAATA 360 consensus_10632#5 ------------------------------------------------------------ consensus_10632#4 ------------------------------GAGGGAATAGTCCTAGTAATGAAAATAATA 30 consensus_10632#1 ACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGCCCACA 267 consensus_10632#3 ACAAAGTTACTGCATTCACTGTAAAATACAGTGAATCTGAATTTAATATATCAGCCCACA 142 consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 TTCCTGATGATGTAAAACATGACTATACATCACAGAATAGTCCTAGTAATGAAAGTAAGT 214 consensus_10632#0 AAATTGTCACTGGAAATGGGAAATTTCAAACTGCACAA-GAAAAGAATCATGAAAAGCAT 419 consensus_10632#5 -----------------------TTTCAAACTGCACAA-GAAAAGAATCATGAAAAGCAT 36 consensus_10632#4 AAATTGTCACTGGAAATGGGAAATTTCAAACTGCACAA-GAAAAGAATCATGAAAAGCAT 89 consensus_10632#1 GTACGCACTTTTGGAAAGCAAGTTTATACTCTTCATTTTGGGTCGGCATACAATAATTAT 327 consensus_10632#3 GTACGCACTTTTGGAAAGCAAGTTTATACTCTTCATTTTGGGTCGGCATACAATAATTAT 202 consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 TTATTTA-ATTAATGAGGTAACTTTTTATACTCGTCTG-----CGAATCTTAGAAACCGT 268 consensus_10632#0 TCTTATTCCTCCAGCAT-TCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGA 478 consensus_10632#5 TCTTATTCCTCCAGCAT-TCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGA 95 consensus_10632#4 TCTTATTCCTCCAGCAT-TCATCAGAAATCTAAGCGCTATAAAAATGAAAAAGAAACGGA 148 consensus_10632#1 TCATATTTATGGTGTTTGTTATTTGGTACAGAAGAAATGTTTAAGTCCTAGATACATCTA 387 consensus_10632#3 TCATATTTATGGTGTTTGTTATTTGGTACAGAAGAAATGTTTAAGTCCTAGATACATCTA 262 consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 TGAT---------GAAAATCGTTGGACCATGGATGTTCATGTAAATCTCATACAATTGAT 319 consensus_10632#0 TATGGCGGTCACAATTT-----CTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACA 533 consensus_10632#5 TATGGCCGTCACAATTT-----CTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACA 150 consensus_10632#4 TATGGCGGTCACAATTT-----CTCGTTCGCGTTCCAAACATTCACATAAAAGGAGAACA 203 consensus_10632#1 TTTTTTTGTTACAGATTTTACACTCGTTATTGTCCTATTCATTTTCATCTTTTCA-ACTG 446 consensus_10632#3 TTTTTTTGTTACAGATTTTACACTCGTTATTGTCCTATTCATTTTCATCTTTTCA-ACTG 321 consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 CATCTCTCCTATAACTCCA--ACACTTAGCTGATGGTGATATCCTTGTCTGTCGAACCTT 377 consensus_10632#0 AATTCACGGCATTCGCATCGCAG-----TCGTAAAAGAGATTTTCGTGGTTCGTCAACAG 588 consensus_10632#5 AATTCACGGCATTCGCATCGCAG-----TCGTAAAAGAGATTTTCGTGGTTCGTCAACAG 205 consensus_10632#4 AATTCACGGCATTCGCATCGCAG-----TCGTAAAAGAGATTTTCGTGGTTCGTCAACAG 258 consensus_10632#1 TCTCCTTGACAATTTTGTTTCCAATACTTTCTTGCAAATGTTCTCACTAACAGCAAACGA 506 consensus_10632#3 TCTCCTTGACAATTTTGTTTCCAATACTTTCTTGCAAATGTTCTCACTAACAGCAAACGA 381 consensus_10632#6 --------------------------ACTGGCGGTAAATTTTTTTTAAGTAAACAAAGGA 34 consensus_10632#2 AATTCATGATGTCGTTA------------CATAACATGTTCGATTGTTTATATATATCGC 425 * * * consensus_10632#0 CTTCTTCAGAATCTTCAAGTTCTAATCATG-GGAACCAAAAAGTAGGATTCTCTCGATTC 647 consensus_10632#5 CTTCTTCAGAATCTTCAAGTTCTAATCATG-GGAACCAAAAAGTAGGATTCTCTCGATTC 264 consensus_10632#4 CTTCTTCAGAATCTTCAAGTTCTAATCATG-GGAACCAAAAAGTAGGATTCTCTCGATTC 317 consensus_10632#1 ACTGATGATCTCCTACGGGACTTCGTGTTCCGGTATTGAATAATATTACTGCTATAATTA 566 consensus_10632#3 ACTGATGATCTCCTACGGGACTTCGTGTTCCGGTATTGAATAATATTACTGCTATAATTA 441 consensus_10632#6 TGGGTCCTTTGTCCCCA--TTTTTATTTGA-------AAAAAAAATTAATCATTTGACCA 85 consensus_10632#2 ACTACTGTCTCCCTTCATTTTGGTAATGAGTGAAATCTTTGAAAAACATTGTCTCAGTCA 485 * * * * * * consensus_10632#0 AGTCGATCCTCA---GCAGA--CCACATTAAAAATGTTCGGTCACCAAAACATTATTNTG 702 consensus_10632#5 AGTCGATCCTCA---GCAGA--CCACATTAAAAATGTTCGGTCACCAAAACATTATTTTG 319 consensus_10632#4 AGTCGATCCTCA---GCAGA--CCACATTAAAAATGTTCGGTCACCAAAACATTATTTTG 372 consensus_10632#1 GGCAGAGTACTGTACACAGAAGCCAGTTTACTAATCAAATCTTTCTCATACAGTTACTCT 626 consensus_10632#3 GGCAGAGTACTGTACACAGAAGCCAGTTTACTAATCAAATCTTTCTCATACAGTTACTCT 501 consensus_10632#6 GTTGGGTTGTTG-----GGAAACCGAATTTTTCCTTACCTGAAAAGTAAAGACAAATTGG 140 consensus_10632#2 GTTTTATTTATAATTATACATCTGTGATTTTTATTATCTGGGAAATCATGCCTCTCATTC 545 * ** * * consensus_10632#0 CGAA-------GTCCA---GTCATTCGA--AACA----TTCTCATCATANAAGTCACCAT 746 consensus_10632#5 CGAA-------GTCCA---GTCATTCGA--AACA----TTCTCATCATAAAAGTCACCAT 363 consensus_10632#4 CGAA-------GTCCA---GTCATTCGA--AACA----TTCTCATCATAAAAGTCACCAT 416 consensus_10632#1 CAAGTTTATCTGTCTA---TTTTTCCTATCATTA----TTCTGTTCAACTTACTGANCAT 679 consensus_10632#3 CAAGTTTATCTGTCTA---TTTTTCCTATCATTA----TTCTGTTCAACTTACTGACAAT 554 consensus_10632#6 CGAT-------AAATA---GGGAACCCA--AAT-----TACTGGCTGAAAAA---AGGGT 180 consensus_10632#2 CTATGCTTCAAATTCAAGTGTTAATCAGCTATCGTGGGTCGTGGGTGCGATAAAAATGAT 605 * * * * * * * * * * consensus_10632#0 TNAGATTGTACACTTTCCT-----GTATTTAAGTGT-AACCCCTGTCTCGTTNG---CAC 797 consensus_10632#5 TAGATTTGTACACTTTCCT-----GTATTAAGTGTT-AACCTGTCTTCGGTTTG---CAC 414 consensus_10632#4 TAGATTTGTACACTTTCCT-----GTATTAAGTGTT-AACCTGTCTTCGGTTTG---CAC 467 consensus_10632#1 ATTTCAAGTAAATCTTAAA-TAGAGTATCTATTTTTTGAAAATTATTAAATTCA--CCTT 736 consensus_10632#3 ATTTCAAGTAAATCTTAAAATAGAGTATCTATTTTTTGAAATTTATTAATTTCAACCTTC 614 consensus_10632#6 GAAATTAATAAATTTCAAAAAATAAATCCTTTTTTTTAAAATTTACTTGAAATATTGGCA 240 consensus_10632#2 TTCAAGTGGGCCTTTTTTTTCTTCCTAGGATTGTTTTGCGTAGTTTAACATTCTGTCCAA 665 * * * consensus_10632#0 TTNATATC-CTTAGT-CACA-GTGAGAAT---TCAGACAGGGTATTT-ATCATTT-GGTA 849 consensus_10632#5 TTATAATC-CTTAGTTCACAAGTGAGATT---TCAGACAGGTAATTTTATCATTT-GGTA 469 consensus_10632#4 TTATAATC-CTTAGTTCACAAGTGAGATT---TCAGACAGGTAATTTTATCATTT-GGTA 522 consensus_10632#1 CTTCAGTC-AGTA-TTTGCGT-CCCTATT-A-TCGNNCATT-GTCTT-ACTTTT--AGTA 787 consensus_10632#3 TTTCAGTC-AGTAATTTGCGTTCCCTATTTA-TCGTCAATTTGTCTTTACTTTTCAGGTA 672 consensus_10632#6 GTAAGTTG-AACAAAATATTGATGGGAAAAA-TAGACAGATAACCTTGAAAGTAACTGTA 298 consensus_10632#2 TAAAAATCTAATAACTTGATGTAGTGATCAACTAAGTCAATCACTATGATCGTTG-AGTA 724 * * * * * * * *** consensus_10632#0 TG-AAATATT-CGTTNCCCCAC----ACACA-CTGCTCAT----------AGAAC--TAA 890 consensus_10632#5 TGGAAATATT-CGGTTTCCCAAC--AACACAACTGCTCAT----------ATGATCTTAA 516 consensus_10632#4 AGTGAATTTAATGACTTTCAAATCAAATCTATTTTCTGATGATTGACTTAACAATAGTAA 582 consensus_10632#1 TG-AANTATT-CGTTNCCACA------CACA-CTGCTCA-----------ATGAACTAA- 826 consensus_10632#3 TGGAAATATT-CGGTTTCCCAAC--AACACAACTGCTCAT----------ATGATCTTAA 719 consensus_10632#6 TGAAAAAA---------------------------------------------------- 306 consensus_10632#2 TA-GGTTTTTCTGGCCTTTTAATGTTCAATGAATTCTGGGAGCATTTAGAGTACTCTGCA 783 consensus_10632#0 NTNCTTTNAT---TAAATAGG-GTACA--GTACCA--TCATT--GTCTACT-AAATAT-- 937 consensus_10632#5 TTTCTTTTTCATATAAATATGTGTACAAAGTACCAA-TCATTT-GTCTACTTAAAAATAA 574 consensus_10632#4 CATGTTATTNTATTCATCTTGTTTCGGCAGTACAAAGTTACTGCATTCACTGTAAAATAC 642 consensus_10632#1 -TTCTTTT----ATAAAAATGNG-ACAAGA---CCA-TCATTG---CTACTTAA------ 867 consensus_10632#3 TTTCTTTTTCATATAAATATGTGTACAAAGTACCAA-TCATTT-GTCTACTTAAAAATAA 777 consensus_10632#6 ------------------------------------------------------------ consensus_10632#2 TATTTTTAGACAGCTTTTCTAATAATTTCATCGACATTTCATTCTACAGCTTAACAAATG 843 consensus_10632#0 -------------------------- consensus_10632#5 TCTA---------------------- 578 consensus_10632#4 AGTGAATCTGAATTTAATATATCAGC 668 consensus_10632#1 -------------------------- consensus_10632#3 -------------------------- consensus_10632#6 -------------------------- consensus_10632#2 CTTTAGNC------------------ 851 |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||