These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10659#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1672 fasta sequence [CAGGTATTATGGCTGAATTGCTTACAATAGAAAACAAGTGGGATTAGAATAGTCTAAAGGTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT-CGAAAAAAACATCCAACAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACAAGATGATGAAGATAATG---AACAACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTTTTCTTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGATTTTTTTTTAAGTGATGTCGTGTGGACCGACACAGGAAACACCTCAATCGCCAATATATATATATATATATA------ATACCTCTACTCATTTCTTACATCGCTTTGTTTTTATATATTAATTTGTAATTTTAATTTCACTATACGGTTGTCAGGTTAAGTTCTAATGGTACCATTTATCATAGCAACTATAATGATCATTATTATTTGACTCCTTATATTTTCATTAATTTTGCTTTGTTTTGTTAGGCATTTAACTTTCATCTAATTAATGAATATGCAATTGATTTATTATGATTGTTAAGATAGATATCTGTGGATAATAATTAAGTTTTCTGTATCTAGTTAGTTGAAAAATGTATCGCTTTTGATGGTAGTATCTATATGAAAATGTGTAACTTTTAAAGTCAAGTACAGCTTTATATGTTAATTAATAAACTATATGTATGGTGTCGAAGCAAGTAAAATATATCTA] [+] EMBL CD079164 [CAGGTATTATGGCTGAATTGCTTACAATAGAAAACAAGTGGGATTAGAATAGTCTAAAGGTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT CGAAAAAAACATCCAACAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGATAGACGCGCACAGAATGATAAATT ] [+] EMBL CD188120 [ TTAGAATAGTCTAAAGGTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT CGAAAAAAACATCCAATAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATA ] [+] EMBL CD062680 [ GTTCACTCTACACCAGAAGGAATGATGGTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCAT CGAAAAAAACATCCAACAGAGAATGTTATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGG ] [+] EMBL CD136979 [ GTAAAAGATAAGAATCGTCCTAAACCACCGATGACACCATATGCATGTTTCGTGCAAGTAATACGTGAGGAGCATNCGAAAAAAACATCCAACAGAGAATGTTATTTCCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTT ] [+] EMBL CD066280 [ TATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCNAGTCAAATTTC AGTGATGAAGTANGACGAGGTGATGGAGATGATGATGATGGAGATGAANATGATGTCGATGATGATGACCATGACGACAACCATGATGAAGAA ] [+] EMBL CD136876 [ ATTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGA ] [-] EMBL CD137184 [ TTTTCAGTGAATTTTCTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGAT ] [+] EMBL CD119606 [ CTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCA ] [+] EMBL CD119616 [ CTAAGAAGTGCGCAGAAAAGTGGAAGCTCATGAATATGGAACAACGAAAGTGTTTCGAGGAAATGGCAAAATTAGATACGGAGAGATTCAATCGGGAAATGGCTCATTATATACCACCAGTTGGAATGAAGCGAGGTCGTAGACGGCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTTTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCA ] [-] EMBL CD190118 [ GCGACGTATCAAAGATCCAAGTATGCCTAAACGTTCATGGTCTGCATTTTTCTTCTTNTGCGATGCATTTCGATCAAAGATTCGTAGTGAGCACCCCGATTGGAAGGTTAGTGATATCGCCAAGGAGTTAGGTAGACGATAGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGG ] [+] EMBL CD069939 [ TTAGGTAGACGATGGGAAGAGTGTTCCGATAAAGAGAAATACGAAAGACGCGCACAGAATGATAAATTGCGTTATGAACAAGATATGGAGAAATACAAAGCTGGATTGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGG ] [+] EMBL CD084228 [ cgaggAGATATGGAGAAATACAAAGCTGGA TGTATGTAGCGACCAAACGTGCTCGAGTTGGCGATCAGACAAAATCAAACGAGATACTGTCATGCTTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACAAGATGATGAAGATAATG AACAACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGT ] [-] EMBL BG931877 [ TCAGACAAAATCAAACGAGATACTGTCATGCCTACACGATCAGTCACATCATAAGGAGTTAGGTGAGGCAAGTCAAATTTCAAGTGATGAAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACAAGATGATGAAGATAATG AACAACAACAACAACAACAACAATCAAACAGAc ] [+] EMBL CD192704 [ AAGTAGGACGAGGTGATGGAGATGATGATGATGGAGATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGTGCAGAACATGATGATGAAGATAATG AACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAGATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTCTTTTCTTCTTCTTTTCTATATTGATAGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTCTATACTGTATACATGTGTTTat ] [-] EMBL CD198770 [ ccAGAAGAGGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGTNGCAGACAAAGATGATGAAGATAATG AACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTTTTCTTCTTCTTTTCTATATTGATAGACTCAACAGATCCATCAATACAAATGCAT ] [+] EMBL CD192511 [ GATGAAGATGATGTCGATGATGATGACGATGACGACGACGATGATGAAGAAGAGGAGGAGGGTGATGGCGCAGAACAAGATGATGAAGATAATG AACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTTTTCTTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATGTGATAATGGTTCCTTACGCATATATCG ] [+] EMBL CD136756 [ AGATAATGAACAACAACAACAACAACAACAACAATCAAACAGATCTAACACTCATGAAATGCCTGTTGGTAGTGATCACAAAACACCAGAACAAATTGTCTCCACTGATACAAGTAGTATTATTATAAACACAGGAAATTAGAATATATTATTTGTTTATGTAAATGTTTCTCTCTTACTCTTTATCATTTCATATATTATTGAAACATATATTTATCAGTGATTCTTTGCTGGTCATTTTT TTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGATTTTTTTTTAAGTGATGTCGTGTGGACCGACACAGGAAACACCTCAATCGCCAATATATATATATATATATA ATACCTCTACTCATTTCTTACATCGCTTTGTTTTTATATATTAATTTGTAATTTTAATTT ] [+] EMBL CD192117 [ TTTTTCTTCTTTTCTATATTGATGGACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGAT ] [+] EMBL CD080834 [ GACTCAACAGATCCATCAATACAAATGCATTTATTCTTTTCCCATTGCTGACTCTCATTTATTTTATACTTTATACATTTGTTTTTGTTTCCTTAGTTTTATATCGATAGATGA TTTTTTTGAGTGATGTCGTGTGGACCGACACAGGAAACACCTCAATCGCCAATATATATATATATATATATATATTATACCTCTACTCATTTCTTACATCGCTTTGTTTTTATATATTAATTTCTAATTTTAATTTCACTATACGGTTGTCAGGTTAAGTTCTAATGGTACCATTTATCATAGCAACTATAATGATCATTATTATTTGACTCCTTATATTTTCATTAATTTTGCTTTGTTTTGTTAGGCATTTAACTTTCATCTAATTAATGAATATGCAATTGATTTATTATGATTGTTAAGATAGATATCTGTGGATAATAATTAAGTTTTCTGTATCTAGTTAGTTGAAAAATGTATCGCTTTTGATGGTAGTATCTATATGAAAATGTGTAACTTTTAAAGTCAAGTACAGCTTTATATGTTAATTAATAAACTATATGTATGGTGTCGAAGCAAGTAAAATATATCTA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||