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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10664#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1001 fasta sequence
[CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA----ACTTGTG-AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG-AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]
[+] EMBL CD081577 [CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTG AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACC ]
[+] EMBL CD081711 [ TTAATTCGGCACGAGGTTTACACANAAACTGCTGCGAAATTTTGGAT TCATTCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTG AAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACC ]
[+] EMBL CD136411 [ ATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAA ]
[+] EMBL AI977698 [ TGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGTTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTGCGCATTATATTTATCTA ]
[-] EMBL CD090645 [ ATCCCTTACAGCAATTGGACTTTCTATTGCACTATGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTAGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTATACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTATCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAg ]
[-] EMBL CD075403 [ GATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACCCTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCC ]
[-] EMBL CD074310 [ TTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATTATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]
[-] EMBL CD075704 [ GTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCAAAGAAAAGTCAAATAATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAAAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCA ACTTGTGAAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGG AAGTTTTGGTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]
[-] EMBL CD074488 [ GTTCTTCCGTATGCATTTTATTTATCTATAAGCTTATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTATTATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGTAACCANNNNNCT TG AAAAAAAATTTATTAATCCGTTCCTAATTGTTTTGAGGNAAAATTT GTAGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAACCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGTGTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC]
consensusID : consensus_10664#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 920 fasta sequence
[CTCGAGGCCAGAATTTGGCACGAGGCAGCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAA-ATCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTACTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATACTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA]
[+] EMBL CD080852 [CTCGAGGCCAGAATTTGGCACGAGGCACCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGAC ATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAA ATCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTACTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATACTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA]
[-] EMBL CD092874 [ gaaatCAGCTGATCNCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTC ]
[+] EMBL CD111124 [ GCTGATCCCAAGGTTGTAGTTAATCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTATGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTGTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTA TTGACAGATCT ]
[+] EMBL CD082089 [ aggacTCCCAA GTTGTAGTTAATCGCGCGATGGTTCTGCTTTTACAAACGACGCAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAAAAGTCAAATAATTTCCAATCC ]
[+] EMBL CD164918 [ TCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCAGTGTTCTGCTCT ]
[+] EMBL CD164976 [ TCGCGCGATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCCTTTTCCTGGGCATATGTTTTCGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTNAACTTGGTGCCTATGA ]
[+] EMBL CD162730 [ GCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCATCCATGCAACCGCTAa ]
[+] EMBL CD080395 [ TACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTAGCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAAT CCTAANATCCCATACTACTTAGAAAC ]
[-] EMBL CD111534 [ ATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGT ]
consensusID : consensus_10664#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence
[CGCGGCCAAAAATTCGGTCCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAG]
[+] EMBL CD077931 [CGCGGCCAAAAATTCGGTCCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCTCTTTTTCCTGGGCATATGTTTTTGTTGGGCTTCCGAAGCACTACATAACATAAGAGGAGAATTCACGGCTTCAAAAATATCATTTTACACAGAAACTGCTGCGAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAATAAGGAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10664#1 ------------------------------------------------------------
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 CGGAGCCATTAATTCGGCACGCCGTTTACACAGAAACTGCTGCGAAATTTTGGATATCAT 60
consensus_10664#1 ------------------------------------------------------------
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 TCTGTTGCGGTGTTGCCTCAGGTATGCAATATTTCTCAGCATTACGGTAAATTTTCAGTC 120
consensus_10664#1 ------------------------------------------------------------
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 ACAGTAGGGCTTTTATCTCCATGCGTTGACTCTAAACTTGGTGCCTATGATGCTTATAAT 180
consensus_10664#1 ----CTCGAGGCCAGAATTTGGCACGAGGCAGCTGATCCCAAGGTTGTAGTTAATCGCGC 56
consensus_10664#2 ---------------------------------------------CGCGGCCAAAAATTC 15
consensus_10664#0 AAGGAGTGGTCTTCAGTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACC 240
* * *
consensus_10664#1 GATGGTCCTGCTTTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCT 116
consensus_10664#2 GGT----CCGAGGTTACAAACGACGAAGTTTTCTGTGTTGGTTTACCGTGGTCTGTTGCT 71
consensus_10664#0 GCTAGAATAGATTTTGCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATT 300
* * * ** * * ** * * * ** * * * * *
consensus_10664#1 -CTTTTTCCTGGGCATATG------TTTTTGTTGGGCTT--CCGAAGCACTACA-TAACA 166
consensus_10664#2 -CTTTTTCCTGGGCATATG------TTTTTGTTGGGCTT--CCGAAGCACTACA-TAACA 121
consensus_10664#0 GCACTTTGGTGGGTATTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCA 360
* *** **** ** ** * ******* ** * * * ** * **
consensus_10664#1 TAAGAGGAGAATTCACGGCTTCAAAAATATCATT--------TTACACAGAAACTGCTGC 218
consensus_10664#2 TAAGAGGAGAATTCACGGCTTCAAAAATATCATT--------TTACACAGAAACTGCTGC 173
consensus_10664#0 TTAATTGCCACATTTATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCAC 420
* * * * * ***** ** * ** * ***** * *
consensus_10664#1 GAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCC 278
consensus_10664#2 GAAATTTTGGATATCATTCTGTTGCGGTGTTGCCTCAGTCACAGTAGGGCTTTTATCTCC 233
consensus_10664#0 CCGATGATGGCTGCTTGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTG 480
** *** * ** * ** * ** * ** * ** **
consensus_10664#1 ATGCGTTGACTCT-----AAACTTGGTGCCTATGATGCTTATAATAAGGAGTGGTCTTCA 333
consensus_10664#2 ATGCGTTGACTCT-----AAACTTGGTGCCTATGATGCTTATAATAAGGAG--------- 279
consensus_10664#0 GTTGGCCGACAATTAGCGAAACCTGATGT-TATGGCGCTAATGCAAAGAAAAGTCAAATA 539
* * *** * **** ** ** **** *** ** *** *
consensus_10664#1 GTTCTGCGGTGTTCTGCTCTGTTCTTCGGTTTCAGCCATGCAACCGCTAGAATAGATTTT 393
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 ATTTCCAATCCTAAAATCCCATACTACTTAGAAACTCGATTTCAAAAACACTGTACATAA 599
consensus_10664#1 GCCACATACTCACAGCTATCCCTTACAGCAATTGGACTTTCTATTGCACTTTGGTGGGTA 453
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 AAATCAAACATGTATAGAAAAAATTAGTTCTTCCGTATGCATTTTATTTATCTATAAGCT 659
consensus_10664#1 TTTGACAGATCTCTTGTTGGATTTGTCTTTGGAATGGCAGTCGCATTAATTGCCACATTT 513
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 TATTATAACGTCGTTACTTTTTGGGTTTCTTTGTTTGTACTCTGAGTGCAGTTTATTTTA 719
consensus_10664#1 ATTTTTCAATCATTTGTTTGGAAACAGCTCTACAGATTTTCTCACCCGATGATGGCTGCT 573
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 TCATTAACATCAACTATACCTCAGCTTACAAACGTAAGTCTCCATTTTGAACTATTTTGT 779
consensus_10664#1 TGGTTGCCTTGTCTTTTCTTCTCTGGTGGTGTCGTCATTGTCCTGGTTGGCCGACAATTA 633
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 AACCAACTTGTGAAAATATATTTATTAATCCGTTCCTATTTGTTTTGAGGAAGTTTTGGT 839
consensus_10664#1 GCGAAACCTGATGTTATGGCGCTAATGCANAGAANAGTCAAATAATTTCCAATCCCTAAA 693
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 AGTTTCTGCATCTTATGTAACTCAGTCCCTTATGTCCTAATTCTGTATATCCAAGTAAAA 899
consensus_10664#1 TCCCATACTACTTAGANACTCGATTTCAAAAACACTGTACATANAAATCAAACATGTATA 753
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 CCCTTTCTTGAGAACTCTTTTTGTCTTCAGTAACTATCCGAATCTCATATGAAAATTTGT 959
consensus_10664#1 GAAAAAATTAGTTCTTCCGTATGCATTNTATTTATCTATAAGCTTATTTATACGTCGNTA 813
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 GTCAAAATCGCACATAAAATTATGATTTTCAATAAATCCATC------------------ 1001
consensus_10664#1 CTTTTTGGGGTTNNNCTTGTTGTACTCTGAGTGCAGTTAATTTATCATTACATCACTATA 873
consensus_10664#2 ------------------------------------------------------------
consensus_10664#0 ------------------------------------------------------------
consensus_10664#1 CTAGCTACAACGTAGTCTCATTTGACTATTGTACCACTGGGAAATTA 920
consensus_10664#2 -----------------------------------------------
consensus_10664#0 -----------------------------------------------
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| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||