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Schistosoma mansoni
cluster # 10680 cluster # 10680       Sequences # 20       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10680#0 length = 1338 sequences # 12  
consensus_10680#1 length = 922 sequences # 8  

consensusID : consensus_10680#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1338
fasta sequence
                              [TTGGATGACCTGGTGTCCAAACTCGAACAAATCATGAATTCTAAGTTTCAGGAGATGGTGGAGCATGGTCGCAAGCTAGTGCTAATGCAAATAGTAACAACTGTGGCATCTGTTGCTGATGCAGCTGAAAAGAAATTCTTACCGTATTATGATCGTTTTATGCCAGTTCTAAAGTATATAATGGAAAATGCTACACACAAAGATTTACGTTTATTGCGTGGTAAAACTATTGAGTGTATAAGTCTTATTGGATTAGCTGTTGGAAAAGAAAAGTTCATTCAGGATGTCGGGCCAGTAATGAATCTATTACTTCAGACGCAAACTCAACCGGATTCTGAATCATCAGACGAAGATGATCCTCAGGCTTCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTCGAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGTAAAACCTGAGATATGTATCCTCGACAATGATGAAGCAGACGATGTAGAATCGGATGTTGATTGGCAAGTTGTCAAATTGGGAGAGGATCGTAATTATGC-AATTCGCACAAGTGGACTAGAAGACAAAG-CAACAGCTTGTCAGATGCTCGTTTGTTATGCACGTGAAATGAAGGAGAGTTTTGCACCTTATTGTCAACAAGTTTTGGATATTATGGTCCCGTTGCTTGATTTCTATTTTAATGATGAAGTTCGTAGTGCTGCTGCTGAATGCCTACCTTTTCTTCTTAGTAGTATGAAGGTTAAGCAACCAGAATTGGTAAAAA-CTGCCTGGGAACGTGTACACAAAAGTCTTATACGAGCAGTAACCAATGAACCTGAGCGTGATGTTGTAGCAGATCATCTACAATCACTTGCAAATTCTATCGAAGCAGTTGGAAAGACTTATGTGACTAGTGATCAGTTAGCTGAAATTCGAAATCTATTAGATCATTTGTTTCATGAACATTTTGAAAAAAGTGATGAACGTCTTGCACAACGACAGAATGAAGATTATGATGAATTCGAAGAAGAACGCCTGTTAAGCGAAAAAGATGAAGATGAATACGTTTTATCAAAAATGTGTGATATTGTTCATTCCATTTTTGCTGCTTTCGGTGTTGAAGCACTTCCATTCTTTCAACAACTTATGGTATTCTGTGTCAAACTCCTGGAACAAAACCGTCCTTGGTCAGATTTGCAGTGGGGTATCTGTTTATGGGATGAGATAATTGAATTCACTGGAACACAGAGTTGGCAATTTCATCAATTTCTCTTTGCTACATNTGTCCNAGCTGTACATCACCAGCAGCCGGATGNNTCGTCAGCTGNT]

[+] EMBL CD112371             [TTGGATGACCTGGTGTCCAAACTCGAACAAATCATGAATTCTAAGTTTCAGGAGATGGTGGAGCATGGTCGCAAGCTAGTGCTAATGCAAATAGTAACAACTGTGGCATCTGTTGCTGATGCAGCTGAAAAGAAATTCTTACCGTATTATGATCGTTTTATGCCAGTTCTAAAGTATATAATGGAAAATGCTACACACAAAGATTTACGTTTATTGCGTGGTAAAACTATTGAGTGTATAAGTCTTATTGGATTAGCTGTTGGAAAAGAAAAGTTCATTCAGGATGTCGGGCCAGTAATGAATCTATTACTTCAGACGCAAACTCAACCGGATTCTGAATCATCAGACGAAGATGATCCTCAGGCTTCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTCGAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD123019             [                                    AATTCTAAGTTTCAGGAGATGGTGGAGCATGGTCGCAAGCTAGTGCTAATGCANATAGTAACAACTGTGGCATCTGTTGCTGATGCAGCTGAAAAGAAATTCTTACCGTATTATGATCGTTTTATGCCAGTTCTAAAGTATATAATGGAAAATGCTACACACAAAGATTTACGTTTATTGCGTGGTAAAACTATTGAGTGTATAAGTCTTATTGGATTAGCTGTTGGAAAAGAAAAGTTCATTCAGGATGTCGGGCCAGTAATGAATCTATTACTTCAGACGCAAACTCAACCGGATTCTGAATCATCAGACGAAGATGATCCTCAGGCTTCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTCGAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGTAAAACCTGAGATATGTATCCTCGACAATGATGAAGCAGACGATGTAGAATCGGATGTTGATTGGCAAGTTGTCAAATTGGGAGAGGATCGTAATTATGC AATTCGCACAAGTGGACTAGAAGACAAAG CAACAGCTTGTCAGATGCTCGTTTGTTATGCACGTGAAATGAAGGAGAGTTTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD165993             [                                                        GGTGGAGCATGGTCGCAAGCTAGTGCTAATGCAAATAGTAACAACTGTGGCATCTGTTGCTGATGCAGCTGAAAAGAAATTCTTACCGTATTATGATCGTTTTATGCCAGTTCTAAAGTATATAATGGAAAATGCTACACACAAAGATTTACGTTTATTGCGTGGTAAAACTATTGAGTGTATAAGTCTTATTGGATTAGCTGTTGGAAAAGAAAAGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD123092             [                                                                                                                      ATGCAGCTGAAAAGAAATTCTTACCGTATTATGATCGTTTTATGCCAGTTCTAAAGTATATAATGGAAAATGCTACACACAAAGATTTACGTTTATTGCGTGGTAAAACTATTGAGTGTATAAGTCTTATTGGATTAGCTGTTGGAAAAGAAAAGTTCATTCAGGATGTCGGGCCAGTAATGAATCTATTACTTCAGACGCAAACTCAACCGGATTCTGAATCATCAGACGAAGATGATCCTCAGGCTTCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTCGAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGTAAAACCTGAGATATGTATCCTCGACAATGATGAAGCAGACGATGTAGAATCGGATGTTGATTGGCAAGTTGTCAAATTGGGAGAGGATCGTAATTATGC AATTCGCACAAGTGGACTAGAAGACAAAG CAACAGCTTGTCAGATGCTCGTTTGTTATGCACGTGAAATGAAGGAGAGTTTTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD202450             [                                                                                                                                                                                                                                                                                GTTCATTCAGGATGTCGGGCCAGTAATGAATCTATTACTTCAGACGCAAACTCAACCGGATTCTGAATCATCAGACGAAGATGATCCTCAGGCTTCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTCGAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGTAAAACCTGAGATATGTATCCTCGACAATGATGAAGCAGACGATGTAGAATCGGATGTTGATTGGCAAGTTGTCAAATTGGGAGAGGATCGTGATTATGCGCATTTGCGCAAGTGGACTATAAGACACAGCCCAC GCGTGTCACATGCTCTTTTGTTATGCACGTGAAATGAAGGAGAGATTTGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD160600             [                                                                                                                                                                                                                                                                                                                                                                              TCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTCGAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGTAAAACCTGAGATATGTATCCTCGACAATGATGAAGCAGACGATGTAGAATCGGATGTTGATTGGCAAGTTGTCAAATTGGGAGAGGATCGTAATTATGC AATTCGCACAAGTGGACTAGAAGACAAAG CAACAGCTTGTCAGATGCTCGTTTGTTATGCACGTGAAATGAAGGAGAGTTTTGCACCTTATTGTCAACAAGTTTTGGATATTATGGTCCCGTTGCTTGATTTCTATTTTAATGATGAAGTTCGTAGTGCTGCTGCTGAATGCCTACCTTTTCTTCTTAGTAGTATGAAGGTTAAGCAACCAGAATTGGTAAAAA CTGCCTGGGAACGTGTACACAAAAGTCTTATACGAGCAGTAACCAATGAACCTGAGCGTGATGTTGTAGCAGATCATCTACAATCACTTGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD121307             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TAGAATCGGATGTTGATTGGCAAGTTGTCAAATGGGGAGTGGATCGTAATTATGC AATTCGCACAAGTGGACTAGAAGACAAAG CAACAGCTTGTCAGATGCTCGTTTGTAATGCACGTGAAATGAAGGAGACTTTTGCACCTGATTGTCAACAAGTTTTGGATATTATGGTCCCGTTGCTTGATTTCTATTTGAATGATGAAGTTCGTAGTGCTGCTGCTGAATGCCTACCTTTTCTTCTTAGTAGTATGAAGGTTAAGCAACCAGAATTGGTAAAAA CTGCCTGGGAACGTGTACACAAAAGTCTTATACGAGCAGTAACCAATGAACCTGAGCGTGATGTTGTAGCAGATCATCTACAATCACTTGCAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD061299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAATCGGATGTTGATTGGCAAGTTGTCAAATTGGGAGAGGATCGTAATTATGC AATTCGCACAAGTGGCCTAGAAGACAAAG CAACAGCTTGTCAGATGCTCGTTTGTTATGCACGTGAAATGAAGGAGAGTTATGCACCTTATTGTCAACAAGTTTTGGATATTATGGTCCCGTTGCTTGATTTCTATTTTAATGATGAAGTTCGTAGTGCTGCTGCTGAATGCCTACCTTTTCTTCTTAGTAGTATGAAGGTTAAGCAACCAGAATTGGTAAAAATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD164855             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCTTTTCTTCTTAGTAGTATGAAGGTTAAGCAACCAGAATTGGTAAAAA CTGCCTGGGAACGTGTACACAAAAGTCTTATACGAGCAGTAACCAATGAACCTGAGCGTGATGTTGTAGCAGATCATCTACAATCACTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD123978             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGGTAAAAA CTGCCTGGGAACGTGTACACAAAAGTCTTATACGAGCAGTAACCAATGAACCTGAGCGTGATGTTGTAGCAGATCATCTACAATCACTTGCAAATTCTATCGAAGCAGTTGGAAAGACTTATGTGACTAGTGATCAGTTAGCTGAAATTCGAAATCTATTAGATCATTTGTTTCATGAACATTTTGAAAAAAGTGATGAACGTCTTGCACAACGACAGAATGAAGATTATGATGAATTCGAAGAAGAACGCCTGTTAAGCGAAAAAGATGAAGATGAATACGTTTTATCAAAAATGTGTGATATTGTTCATTCCATTTTTGCTGCTTTCGGTGCTGAAc                                                                                                                                                                                                              ]
[+] EMBL CD181512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCTATTAGATCATTTGTTTCATGAACATTTTGAAAAAAGTGATGAACGTCTTGCACAACGACAGAATGAAGATTATGATGAATTCGAAGAAGAACGCCTGTTAAGCGAAAAAGATGAAGATGAATACGTTTTATCAAAAATGTGTGATATTGTTCATTCCATTTTTGCTGCTTTCGGTGTTGAAGCACTTCCATTCTTTCAACAACTTATGGTATTCTGTGTCAAACTCCTGGAACAAAACCGTCCTTGGTCAGATTTGCAGTGGGGTATCTGTTTATGGGATGAGATAATTGAATTCACTGGAACACAGAGTTGGCAATTTCATCAATTTCTCTTTGCTACATNTGTCCNAGCTGTACATCACCAGCAGCCGGATGNNTCGTCAGCTGNT]
[+] EMBL CD154381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCCTGTTAAGCGAAAAAGATGAAGATGAATACGTTTTATCAAAAATGTGTGATATTGTTCATTCCATTTTTGCTGCTTTCGGTGTTGAAGCACTTCCATTCTTTCAACAACTTATGGTATTCTGTGTCAAACTCCTGGAACAAAATCGTCCTTGGTCAGATTTGCAGTGGGGTATCTGTTTATGGGATGAGATAATTGAATTCACTGGAACACAGAGTTGGCAATTTCATCAATTcttc                                                         ]


>consensus_10680#0 TTGGATGACCTGGTGTCCAAACTCGAACAAATCATGAATTCTAAGTTTCAGGAGATGGTG GAGCATGGTCGCAAGCTAGTGCTAATGCAAATAGTAACAACTGTGGCATCTGTTGCTGAT GCAGCTGAAAAGAAATTCTTACCGTATTATGATCGTTTTATGCCAGTTCTAAAGTATATA ATGGAAAATGCTACACACAAAGATTTACGTTTATTGCGTGGTAAAACTATTGAGTGTATA AGTCTTATTGGATTAGCTGTTGGAAAAGAAAAGTTCATTCAGGATGTCGGGCCAGTAATG AATCTATTACTTCAGACGCAAACTCAACCGGATTCTGAATCATCAGACGAAGATGATCCT CAGGCTTCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTC GAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGTAAAACCTGAG ATATGTATCCTCGACAATGATGAAGCAGACGATGTAGAATCGGATGTTGATTGGCAAGTT GTCAAATTGGGAGAGGATCGTAATTATGCAATTCGCACAAGTGGACTAGAAGACAAAGCA ACAGCTTGTCAGATGCTCGTTTGTTATGCACGTGAAATGAAGGAGAGTTTTGCACCTTAT TGTCAACAAGTTTTGGATATTATGGTCCCGTTGCTTGATTTCTATTTTAATGATGAAGTT CGTAGTGCTGCTGCTGAATGCCTACCTTTTCTTCTTAGTAGTATGAAGGTTAAGCAACCA GAATTGGTAAAAACTGCCTGGGAACGTGTACACAAAAGTCTTATACGAGCAGTAACCAAT GAACCTGAGCGTGATGTTGTAGCAGATCATCTACAATCACTTGCAAATTCTATCGAAGCA GTTGGAAAGACTTATGTGACTAGTGATCAGTTAGCTGAAATTCGAAATCTATTAGATCAT TTGTTTCATGAACATTTTGAAAAAAGTGATGAACGTCTTGCACAACGACAGAATGAAGAT TATGATGAATTCGAAGAAGAACGCCTGTTAAGCGAAAAAGATGAAGATGAATACGTTTTA TCAAAAATGTGTGATATTGTTCATTCCATTTTTGCTGCTTTCGGTGTTGAAGCACTTCCA TTCTTTCAACAACTTATGGTATTCTGTGTCAAACTCCTGGAACAAAACCGTCCTTGGTCA GATTTGCAGTGGGGTATCTGTTTATGGGATGAGATAATTGAATTCACTGGAACACAGAGT TGGCAATTTCATCAATTTCTCTTTGCTACATNTGTCCNAGCTGTACATCACCAGCAGCCG GATGNNTCGTCAGCTGNT



consensusID : consensus_10680#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 922
fasta sequence
                              [GATCGTTATGCCCATCATCTAAATGATTATGGTGGTGGAGGAGGAGAAAACGCTCGGTTGGACGAAACGAATATGGATGAGTGCGGACCAGCCTAAATGTGTGATTTCGCTCATTCCATCCGGGCTGCTTATACGCGTGGAAGCACTTGATGACTTTGGGCGACGAATGGTACTCGGCGTAAAGCTCCTGGAACCGTTTCTATCTTGATGATATATCCGGTGCGGATTCTGCTTATGGAATGAGACAATTGGATACACTGAATCTCAGAGCTCGCAATTACAT-TTTTCACCTT-GCCTACATTTGTCCAAGCTGTACATCACCAGCAGCCGGATGTTCGTCAAGCTGTTGTTTATGGGATCGGCGTAGCTGCTATGAAAGGCGGTCCTGAGTATAATCAAATATTGTCTGATTTTGTTGGACCACTTATACAGTTAGTTGAAGCCCCAGATTCAAAGTCTGAAGAAA-ACAA-TTTATGCACCGAAAATGCAATTAGCGCG-ATCACAAAGATTATGAAATATCGACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTGATGATACTGTAGAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTGTAATTGGACCAGATAACTCTAACCTACCCCGCATCGTTCGTGCTATCGCTGAATCCATGTCTACTGGCGGTCTGTCTGATACAAACACCGAAGAAAATCGATCGAAACTGGAAACGGTTAATCAAGCTGGTGGTTTCAATCAGCAAAACGGTTTAGAAAAACCTTCCGCTTATCAACGGTGTGTATCCATACTGCGCCACATACAATCCAATTCATCATTGGTAGAAGTATGTGTAAGTCAATTAATTGAAGAAC]

[+] EMBL CD157826             [GATCGTTATGCCCATCATCTAAATGATTATGGTGGTGGAGGAGGAGAAAACGCTCGGTTGGACGAAACGAATATGGATGAGTGCGGACCAGCCTAAATGTGTGATTTCGCTCATTCCATCCGGGCTGCTTATACGCGTGGAAGCACTTGATGACTTTGGGCGACGAATGGTACTCGGCGTAAAGCTCCTGGAACCGTTTCTATCTTGATGATATATCCGGTGCGGATTCTGCTTATGGAATGAGACAATTGGATACACTGAATCTCAGAGCTCGCAATTACAT TTTTCACCTTCGCCTACTGCCGGCCAAGCTGTACCTCACCATCATCCGGATGTTCGTCAAGCTGTTGTGTATGGGATCGGCGTAACTGCTATGAAAGGCGGTCCTGAGTATAATCAAATATTGTCTGATTTTGTTGGACCACTTATACAGCTAGGTGAAGCCCGANATTCAAAGTCTGAAGAAA ACAA TTTATGCACCGAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD196532             [                                                                                                                                                                                                                                      gtTTATGGGATGAGATAATTGAATTCACTGGAACACAGAGTTGGCAATTTCATCAATTCTTCTT GCCTACATTTGTCCAAGCTGTACATCACCAGCAGCCGGATGTTCGTCAAGCTGTTGTTTATGGGATCGGCGTAGCTGCTAGGAAAGGCGGTCCTGAGTATAATCAAATATTGTCTGATTTTGTTGGACCACTTATACAGTTAGTTGAAGCCCCAGATTCAAAGTCTGAAGAAA ACAA TTTATGCACCGAAAATGCAATTAGCGCG ATCACAAAGATTATGAAATATCGACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTGATGATACTGTAGAGACTGAACATGTATACGGCTAT                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD115823             [                                                                                                                                                                                                                                                                                                          TACATTTGTCCCAGCTGTACATCACCAGCAGCCGGATGTTCGTCAAGCTGTTGTTTATGGGATCGGCGTAGCTGCTATGAAAGGCGGTCCTGAGTATAATCAAATATTGTCTGATTTTGTTGGACCACTTATACAGTTAGTTGAAGCCCCAGATTCAAAGTCTGAAGAAA ACAA TTTATGCACCGAAAATGCAATTAGCGCG ATCACAAAGATTATGAAATATCGACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTGATGATACTGTAGAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTGTAATTGGACCAGATAACTCTAACCTACCCCGCATCGTTCGTGCTATCGCTGAATCCATGTCTACTGGCGGTCTGTCTGATACAAACACCGAAGATAATCGATCGAAACTGGAAACGGTTAATCAAGCTGGTGGTTTCAATCAGCAAACCGCTCTAGAAAAACCTTCCGCTTATCAACGGTGTGTATCCATACTGCGCCACATACAATCCAATTCATCATTGGTAGAAGTATGTGTAAGTCAATTAAT        ]
[+] EMBL CD162972             [                                                                                                                                                                                                                                                                                                                                               GTTCGTCAAGCTGTTGTTTATGGGATCGGCGTAGCTGCTATGAAAGGCGGTCCTGAGTATAATCAAATATTGTCTGATTTTGTTGGACCACTTATACAGTTAGTTGAAGCCCCAGATTCAAAGTCTGAAGAGA ACAA TTTATGCACCGAAAATGCAATTAGCGCG ATCACAAAGATTATGAAATATCGACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTGATGATACTGTAGAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTGTAATTGGACCAGATAACTCTAACCTACCCCGCATCGTTCGTGCTATCGCTGAA                                                                                                                                                                                                          ]
[+] EMBL CD077342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCAGATTCAAAGTCTGAAGAAATACAACTTTATGCTCCGAAAATGCAATTAGCGCGCATCACAAAGATTATGAAATATCGACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTTATGATACTGTACAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTGTAATTGGACCATATAACTCTAACCTACCCCGCATCGTTCGTGCTATCGCTGAATCCATGTCTACTGGCGGTCTGTCTGATACAAACACCGAAGAATATCGATCGACACTGGAAACGGTTAATCAAGCTGGTGGTTTCAATCAGCAAAACGGTTTAGAAAAACCTTCCGCTTATCAACGGTGTGTATCCATACTGCGCCACATACAATCCAATTCATC                                      ]
[-] EMBL CD196638             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCGAAAATGCAATTAGCGCG ATCACAAAGATTATGAAATATCGACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTGATGATACTGTAGAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTGTAATTGGACCAGATAACTCTAACCTACCCCGCATCGTTCGTGCTATCGCTGAATCCATGTCTACTGGCGGTCTGTCTGATACAAACACCGAAGAAAATCGATCGAAACTGGAAACGGTTAATCAAGCTGGTGGTTTCAATCAGCAAAACGGTTTAGAAAAACCTTCCGCTTATCAACGGTGTGTATCCATACTGCGCCACATACAATCCAATTCATCATTGGTAGAAGTATGTGTAAGTCAATTAAATGAAGAAC]
[+] EMBL CD120220             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCG ATCACAAAGATTATGAAATACCGACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTGATGATACTGTAGAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTGTAATTGGACCAGATAACTCTAACCTACCCCGCATCGTTCGTGCTATCGCTGAATCCATGTCTACTGGCGGTCTGTCTGATACAAACA                                                                                                                                                                        ]
[-] EMBL CD129207             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCTTCCTATATGTGATGATACTGTAGAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTGTAATTGGACCAGATAACTCTAACCTACCCCGCATC                                                                                                                                                                                                                            ]


>consensus_10680#1 GATCGTTATGCCCATCATCTAAATGATTATGGTGGTGGAGGAGGAGAAAACGCTCGGTTG GACGAAACGAATATGGATGAGTGCGGACCAGCCTAAATGTGTGATTTCGCTCATTCCATC CGGGCTGCTTATACGCGTGGAAGCACTTGATGACTTTGGGCGACGAATGGTACTCGGCGT AAAGCTCCTGGAACCGTTTCTATCTTGATGATATATCCGGTGCGGATTCTGCTTATGGAA TGAGACAATTGGATACACTGAATCTCAGAGCTCGCAATTACATTTTTCACCTTGCCTACA TTTGTCCAAGCTGTACATCACCAGCAGCCGGATGTTCGTCAAGCTGTTGTTTATGGGATC GGCGTAGCTGCTATGAAAGGCGGTCCTGAGTATAATCAAATATTGTCTGATTTTGTTGGA CCACTTATACAGTTAGTTGAAGCCCCAGATTCAAAGTCTGAAGAAAACAATTTATGCACC GAAAATGCAATTAGCGCGATCACAAAGATTATGAAATATCGACCTGAATGTTTACCGCCA GCACTAGGAGGTATTGACGCTTTGATCGTCCGATGGTTAGGTTGGCTTCCTATATGTGAT GATACTGTAGAGACTGAACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAAT CCTGTTGTAATTGGACCAGATAACTCTAACCTACCCCGCATCGTTCGTGCTATCGCTGAA TCCATGTCTACTGGCGGTCTGTCTGATACAAACACCGAAGAAAATCGATCGAAACTGGAA ACGGTTAATCAAGCTGGTGGTTTCAATCAGCAAAACGGTTTAGAAAAACCTTCCGCTTAT CAACGGTGTGTATCCATACTGCGCCACATACAATCCAATTCATCATTGGTAGAAGTATGT GTAAGTCAATTAATTGAAGAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10680#0      TTGGATGACCTGGTGTCCAAACTCGAACAAATCATGAATTCTAAGTTTCAGGAGATGGTG 60
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      GAGCATGGTCGCAAGCTAGTGCTAATGCAAATAGTAACAACTGTGGCATCTGTTGCTGAT 120
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      GCAGCTGAAAAGAAATTCTTACCGTATTATGATCGTTTTATGCCAGTTCTAAAGTATATA 180
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      ATGGAAAATGCTACACACAAAGATTTACGTTTATTGCGTGGTAAAACTATTGAGTGTATA 240
consensus_10680#1      --------------------------------------------GATCGTTATGCCCATC 16
                                                                    *   **  *   ** 

consensus_10680#0      AGTCTTATTGGATTAGCTGTTGGAAAAGAAAAGTTCATTCAGGATGTCGGGCCAGTAATG 300
consensus_10680#1      A-TCTAAATGATTATGGTGGTGGAGGAGGAGAAAACGCTCGGTTGGACGAAACGAATATG 75
                       * *** * **  *  * ** ****  ** * *   *  ** *   * **   *    ***

consensus_10680#0      AATCTATTACTTCAGACGCAAACTCAACCGGATTCTGAATCATCAGACGAAGATGATCCT 360
consensus_10680#1      GAT----------GAGTGCGGAC-CAGCCTAAATGTGTGATTTCGCTC----ATTCCATC 120
                        **              **  ** ** **  * * **     **   *    **      

consensus_10680#0      CAGGCTTCTTATATGATTAGCGCTTGGGCAAGAATCTGCAAGCTATTGGGTCGTGATTTC 420
consensus_10680#1      CGGGCTGCTTATA-------CGCGTGG--AAGCACTTGATGACT-TTGGGCGA------C 164
                       * **** ******       *** ***  *** *  **    ** *****         *

consensus_10680#0      GAAAGTTATCTTCCTGTTGTTATGCCACAGGTATTACGTTCTGCCTGTGTAAAACCTGAG 480
consensus_10680#1      GAATGGTA----CTCGGCGTAAAGCTCCTGGAACCGT-TTCTATCTTGATGATATATCCG 219
                       *** * **    *  *  ** * **  * ** *     ****  **   * * *  *  *

consensus_10680#0      ATATGTATCCTCGACAATGATGAAGCAGACGATGTAGAATCGGATGTTGATTGGCAAGTT 540
consensus_10680#1      GTGCGGATTCTGCTTATGGAATGAGACAATTGGATACA-CTGAATCTCAGAGCTCGCAAT 278
                        *  * ** **    *  **   **   *     ** *   * ** *       *    *

consensus_10680#0      GTCAAATTGGGAGAGGATCGTAATTATGCAATTCGCACAAGTGGACTAGAAGACAAAGCA 600
consensus_10680#1      TACATTTTTCACCTTGCCTACATTTGTCCAAGCTGTACA---TCACCAGCAGCCGGAT-- 333
                         **  **       *     * ** * ***   * ***     ** ** ** *  *   

consensus_10680#0      ACAGCTTGTCAGATGCTCGTTTGTTATGCACGTGAAATGAAGGAGAGTTTTGCACCTTAT 660
consensus_10680#1      ---GTTCGTCAAGCTGTTGTTTATGGGATCGGCGTAGCTGCTATGAAAGGCGGTCCTGAG 390
                          * * ****     * **** *       * * *        **     *  *** * 

consensus_10680#0      TGTCAACAAGTTTTGGATATTATGGTCCCGTTGCTTGATTTCTATTTTAATGATGAAGTT 720
consensus_10680#1      TATAATCAAATATTG-----TCTGATTTTGTTGGACCACTTATACAGTTA-GTTGAAGCC 444
                       * * * *** * ***     * ** *   ****    * ** **   * * * *****  

consensus_10680#0      CGTAGTGCTGCTGCTGAATGCCTACCTTTTCTTCTTAGTAGTATGAAGGTTAAGCAACCA 780
consensus_10680#1      CCAGATTCAAAGTCTGAA-GAAAACAATTTATGCACCG-AAAATGCAATTAGCGCGATCA 502
                       *    * *     ***** *   **  *** * *   * *  *** *  *   ** * **

consensus_10680#0      GAATTGGTAAAAACTGCCTGGGAACGTGTACACAAAAGTCTTATACGAGCAGTAACCAAT 840
consensus_10680#1      CAAAGATTATGAAATATC----GACCTGAATGTTTACCGCCAGCACTAGGAGGTATTGAC 558
                        **    **  ** *  *     ** ** *     *   *    ** ** **  *   * 

consensus_10680#0      GAACCTGAGCGTGATGTTGTAGCAGATCATCTACAATCACTTGCAAATTCTATCGAAGCA 900
consensus_10680#1      GC-TTTGATCGTCCGATGGT--TAGGTTGGCTTCCTATATGTGATGATACTGTAGAGACT 615
                       *    *** ***    * **   ** *   ** *    *  **   ** ** * **  * 

consensus_10680#0      GTTGGAAAGACTTATGTGACTAGTGATCAG--TTAGCTGAAATTCGAAATCTATTAGATC 958
consensus_10680#1      G-----AACATGTATACGGCTATCTATGTGATCTTATTGAAGCCAATAATCCTGTTG--T 668
                       *     ** *  ***  * ***   **  *   *   ****      ****   * *   

consensus_10680#0      ATTTGTTTCATGAACATTTTGAAAAAAGTGATGAACGTCTTGCACAACGACAGAATGAAG 1018
consensus_10680#1      AATTGGACCA-GATAACTCTAACCTACCCCGCATCGTTCGTGC-TATCGCTGAATCCATG 726
                       * ***   ** **  * * * *   *           ** ***  * **    *   * *

consensus_10680#0      ATTATGATGAATTCGAAGAAGAACGCCTGTTAAGCGAAAAAGATGAAGATGAATACGTTT 1078
consensus_10680#1      TCTACTGGCGGTCTGTCTGATACAAACACCGAAGAAAATCGATCGAAACTGGAAACGGTT 786
                         **       *  *    * *    *    ***  **      ***  ** * *** **

consensus_10680#0      TATCAAAAATGTGTGATATTGTTCATTCCATTTTTGCTGCTTTCGGTGTTGAAGCACTTC 1138
consensus_10680#1      AATCAA--GCTGGTGGTTTCAATCAGCAAAA------------CGGTTTAGAAAAACCTT 832
                        *****      *** * *   ***    *             **** * ***  ** * 

consensus_10680#0      CATTCTTTCAACAACTTATGGT-ATTCTGTGTCAAACTCCTGGAACAAAACCGTCCTTGG 1197
consensus_10680#1      CCGCTTATCAACGGTGTGTATCCATACTGCGCCACATAC---AATCCAATTCATCATTGG 889
                       *    * *****    * *    ** *** * ** *  *    * * **  * ** ****

consensus_10680#0      TCAGATTTGCAGTGGGGTATCTGTTTATGGGATGAGATAATTGAATTCACTGGAACACAG 1257
consensus_10680#1      TAGAAGTATGTGTAAGTCAATTAATTGAAGAAC--------------------------- 922
                       *   * *    **  *  *  *  **   * *                            

consensus_10680#0      AGTTGGCAATTTCATCAATTTCTCTTTGCTACATNTGTCCNAGCTGTACATCACCAGCAG 1317
consensus_10680#1      ------------------------------------------------------------
                                                                                   

consensus_10680#0      CCGGATGNNTCGTCAGCTGNT 1338
consensus_10680#1      ---------------------
                                            




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)