These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1138 fasta sequence [TTTTTCATAACCCTTACAGTTTTTATAGTTCTGTACATCAAGTAGGTCATTAATAAGAAAATAATACAAATACTTGCACAAATGGAAACTTTATATACATCTGACAACGAAAATTGTTTCGCACCTACATAAAATTTGTTTCTAAAAAAGATGTACATATATAATATATTCTTTTAGACAAATTTCACTTTCTTCGCAGCATTTGATGGGTGTAGAGCACTGCGTTCTTGTGCAACCTTCTGAGCTTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTTGAGAAGCTCTAATATAAGTGGCAAATAGTTGTGTCGACGACGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCG-ATATTATTCGTTAGCTCTGTTATGTAGGCAGATTCTGGATCACTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAATTGCTAAAGCTGTTATGTACAACTCTAATTTGAT-CAGAATTGCTTATTGCTGTACC-TTTCATTGTACTGTC-AATTCTGA-CACAAAAGAC-TTG-AAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTT-AGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTCTAC------ACCTCTAATAAGTTCAGTGAATACTCCGGGATCGCTTTCTATCAAACACCAATTACCACTACTTGACAAGCTTGAAGCTTG] [-] EMBL CD073338 [TTTTTCATAACCCTTACAGTTTTTATAGTTCTGTACATCAAGTAGGTCATTAATAAGAAAATAATACAAATACTTGCACAAATGGAAACTTTATATACATATGTCAACGAAAATTGTTTCGCACATACATAAAATTTGTTTTTAAAAAAGATGTACATATATAATATATT ] [+] EMBL CD075030 [ GAAACTTTATACTCATCTGACAACGAAAATTGTTTCGCACCTACATAAAATTTGTTTCTAAAAAAGATGTACATATATAATATATTCTTTTAGACAAATTTCACTTTCTTCGCAGCATTTGATGGGTGTAGAGCACTGCGTTCTTGTGCAACCTTCTGAGCTTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTTGAGAAGCTCTAATATAAGTGGCAAATAGTTGTGTCGACGACGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCG ATATTATTCGTTAGCTCTGTTATGTAGGCAGATTCTGGATCACTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAATTGCTAAAGCTGTTATGTACAACTCTAATTTGAT CAGAATTGCTTATTGCTGTACC TTTCATTGTACTGTC AATTCTGA CAC AAAGAC TTG AAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCA ] [+] EMBL CD074864 [ GAAACTTTATATACATCTGACAACGAAAATTGTTTCGCACCTACATAAAATTTGTTTCTAAAAAAGATGTACATATATAATATATTCTTTTAGACAAATTTCACTTTCTTCGCAGCATTTAATGGGTGTAGAGCACTGCGTTCTTGTGCAACCTTCTGAGCTTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTTGAGAAGCTCTACTATAAGTGGCAAATAGTTGTGTCGACGACGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCG ATATTATTCGTTAGCTCTGTTATGTAGGCAGATTCTGGATCACTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAATTGCTAAAGC ] [+] EMBL CD075271 [ GAAACTTTATATACATCTGACAACGAAAATTGTTTCGCACCTACATAAAATTTGTTTCTAAAAAAGATGTACATATATAATATATTCTTTTAGACAAATTTCACTTTCTTCGCAGCATTTGATGGGTGTAGAGCACTGCGTTCTTGTGCAACCTTCTGAGCTTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTTGAGAAGCTCTACTATAAGTGGCAAATAGTTGTGTCGACGACGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCG ATATTATTCGTTAGCTCTGTTATGTAGGCAGATTCTGGATCACTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGA ] [-] EMBL CD081200 [ AACTTTATAT CATCTGAC ACGAAAATTGTNTCGCACCTACATAAAA TTGTTTCTAAAAAAGATGTACATATATAATAT TTCTTTTAGACAAATTTCACTTTCTTCGCAGCATTTGNTGGGTGTAGAGCACTGCGTTCTTGTGCAACCTTCTGAGCTTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTTGAGAAGCTCTAATATAAGTGGCAAATAGTTGTGTCGACGNCGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCGNATATTATTCGTTAGCTCTGTTATGTAGGCAGATTCTGGATCACTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATC ACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATA GGACGTAACCAACNAAAT GT AACACCTTCACTTGACTTT GGGTCTTCTCATCAAACTCAAAAAGCTGGTAATTGCTAAAGCTGTTATGTACAACTCTAATTTGTTCCANAA TGCTTA ] [-] EMBL CD078581 [ tnTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAATTGCTAAAGCTGTTATGTACAACTCTAATTTGAT CAGAATTGCTTATTGCTGTACC TTTCATTGTACTGTCAAATTCTGA CACAAAAGAC TTG AAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTT AGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGCGTCAGACACGTTGC ] [-] EMBL CD137493 [ GCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTNTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAATTGCTAAAGCTGTTATGTACAACTCTAATTTGAT CAGAATTGCTTATTGCTGTACC TTTCATTGTACTGTCAAATTCTGA CACAAAAGAC TTG AAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTT AGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTCTAC AC ] [-] EMBL BE431296 [ atTCTAATTTGAT CAGAATTGCTTATTGCTGTACN TTTCATTGTACTGTCAAATTCTGA CACAAAAGACTTTG AAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTT AGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTTTGTTTCGCAAAAAATATGCCCNTATTGTTTGCGTCATTNACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTNTACACCAAAACCTCTAATAAGTTCAGTGAATACTCCGGGATCGCTTTCTATCAAACACCAATTACCACTACTTGACAAGCTTG ] [-] EMBL BE431294 [ tTCTAATTTGAT CAGAATTGCTTATTGCTGTACCTTTTCATTGTACTGTCAAATTCTGA CACAAAAGAC TTG AAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTT AGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTCAAA ACCTCTAATAAGTTCAGTGAATACTCCGGGATCGCTTTNTATCAAACACCAATTACCACTACTTGACATTGTTGAAGCTTG] [-] EMBL BE431295 [ ca AATTTTGACCNCAAAAAAC TTGAAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGNAATTGTTTGTTTCGCAAAAAATATGCCCCTATTGTNTGGGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGNGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAANTTTTTCGCACTCCAAACTTTCAAA ACCTCTAATAAGTTCAGTGAATACTCCGGGATCGCTTTCTATCAAACACCAATTACCACTACTTG ] consensusID : consensus_10699#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 744 fasta sequence [AACTTTANTATACATCTGACACGAAAAATGTTTTCGCACNTACATAAAATTGTTTCTAAAAAAGATGTACATATATAATATATCTNTTAGACNAATTTNNNNNNNNNNNNNNNNTAATGGGTGTAGAGCACTGCGTTCTTGTGCAACTTCTGAGCTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTGAGAAGCTCTACTATAAGTGGCAAATAGTTGTGTCGACGACGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCGATATTATTCGTACTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAATAATTTGATCAGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAAATTGTTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCCCTC] [-] EMBL CD081036 [AACTTTANTATACATCTGACACGAAAAATGTTTTCGCACNTACATAAAATTGTTTCTAAAAAAGATGTACATATATAATATATCTNTTAGACNAATTTNNNNNNNNNNNNNNNNTAATGGGTGTAGAGCACTGCGTTCTTGTGCAACTTCTGAGCTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTGAGAAGCTCTACTATAAGTGGCAAATAGTTGTGTCGACGACGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCGATATTATTCGTACTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAATAATTTGATCAGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAAATTGTTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCCCTC] consensusID : consensus_10699#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 649 fasta sequence [GTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAACTAAGTACATATTAGCAATACAGAGGAAAATTACTTGCTAAAGCTGTTATGTACAACTCTAATTTGATCAGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTCTAACAGAAATGTATGAACAACTAATACACTACTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAAC-CCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTCTACACCAAAACCTCT-AATAAGTTCAGTGAA] [-] EMBL CD081448 [GTCTACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCCCATCAAACTCAAAAAGCTGGTAACTAAGTACATATTAGCAATACAGAGGAAAATTACTTGCTAAAGCTGTTATGTACAACTCTAATTTGATCAGAATTGCTTATTGCTGTAC ] [+] EMBL CD145230 [ GTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAACTAAGTACATATTAGCAATACAGAGGAAAATTACTTGCTAAAGCTGTTATGTACAACTCTAATTTGATCAGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTCTAACAGAAATGTATGAACAACTAATACACTACTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAAC CCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTCTACACCAAAACCTCT AATAAGTTCAGTGAA] [+] EMBL CD145310 [ GTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAACTAAGTACATATTAGCAATACAGAGGAAAATTACTTGCTAAAGCTGTTATGTACAACTCTAATTTGATCAGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTCTAACAGAAATGTATGAGCAACTAATACACTACTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACNCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTCTACACCAAAACCTCTAAATAAG TCAGTGg ] [+] EMBL CD145286 [ GTACAAAGTACTATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAACTAAGTACATATTAGCAATACAGAGGAAAATTACTTGCTAAAGCTGTTATGTACAACTCTAATTTGATCAGAATTGCTTATTGCTGTACCTTTCATTGCACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTCTAACAGAAATGTATGAACAACTAATACACTACTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAAC CCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTTTCTACACCAAAACCTCT AATAAGTTCAGTGAA] [+] EMBL CD145330 [ GTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCTTCTCACCAAACTCAAAAAGCTGGTAACTAAGTACATATTAGCAATACAGAGGAAAATTACTTGCTAAAGCTGTTATGTACAACTCTAATTCGATCAGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTCTAACAGAAATGTATGGACAACTAATACACTACTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAAC CCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATAAACTTCTTCGCACTCCAAACTNTCTACACCAAAACCTCT AATAAAGTCAGTGA ] consensusID : consensus_10699#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 463 fasta sequence [AGGGNNACCGTTTTCCCCNGGTATTTTNAGAAGCTCTACTATAAGT-GCAAATAGTTGTGTCGACGACNAATGTTTTCTGCACNATACGNNGCAATTTTCTTNTTTTCACTGGCGATATTATTC-NTNANCTCTGTTATGNANGCAGATTCTGGATCACTTGANTNTATTTTATATCCCGCCAACTGTTTTTCATACATAACGAGTCNATTAAGAACTACNGCCATTATATTGAACTTTCCGNCTACACATTTCTCCATACNCTTNATTANCAACNGNCNGACCNAATTTATNCAAGANNAATTCTNAGGTAGTTTTCCNTGATCAACAGGGNCGGGTTTTAANCCATCCAATTCCTACAAAGTACCATTAATANGGACGTNACCAACNGANNTGGNAACACCTCTACTTGACTTNGGGGTCTTCTCATAAAACNCAAAAAGCTGGTNATTTGCTAAAGCTTTTA] [+] EMBL BE431290 [AGGGNNACCGTTTTCCCCNGGTATTTTNAGAAGCTCTACTATAAGT GCAAATAGTTGTGTCGACGACNAATGTTTTCTGCACNATACGNNGCAATTTTCTTNTTTTCACTGGCGATATTATTC NTNANCTCTGTTATGNANGCAGATTCTGGATCACTTGANTNTATTTTATATCCCGCCAACTGTTTTTCATACATAACGAGTCNATTAAGAACTACNGCCATTATATTGAACTTTCCGNCTACACATTTCTCCATACNCTTNATTANCAACNGNCNGACCNAATTTATNCAAGANNAATTCTNAGGTAGTTTTCCNTGATCAACAGGGNCGGGTTTTAANCCATCCAATTCCTACAAAGTACCATTAATANGGACGTNACCAACNGANNTGGNAACACCTCTACTTGACTTNGGGGTCTTCTCATAAAACNCAAAAAGCTGGTNATTTGCTAAAGCTTT ] [+] EMBL BE431288 [ AGCTCTACTATAAGTGGCAAATAGTTGTGTCGACGACNAATGTTTTCTGCNCNATACGNNGCAATTTTCTTNTTTTCACTGGCGATATTATTCGNT AGCTCTGTTATGNANGCAGATTCTGGATCACTTGANTNTATTTTATATCCCGCCAACTGTTTTTCATACATAACGAGTCNATTAAGAACTACNGCCATTATATNGAACTTTCCGNCTACACATTTCTCCATACNCTTNATTAGCAACGGNCNGACCNAATNTATCCAAGATGAATTCTNAGGTAGTTTTCCNTGANCAACAGGGCCGGGTTTTAANCCATCCAATTCCAACAAAGNACCATTAATAGGGACGCNACCAAC GAANTGGNANCACCTTCACTTGACTTNGGGGTCTTATCATCAAACTCAAAAAGCTGGTNA TTGCTAAAGCTGTTA] consensusID : consensus_10699#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 327 fasta sequence [CAAATTTCATACTGTACTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTCTAACAGAAATGTATGAACAACTAATACACTACTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCAGCCTCGTGCCGAATCTTGGCT] [-] EMBL CD081447 [CAAATTTCATACTGTACTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAAGATATTAATAATTGCTTGCGTCGCACAAGCATTTGGAATTGTCTAACAGAAATGTATGAACAACTAATACACTACTTGTTTCGCAAAAAATATGCCCCTATTGTTTGCGTCATTTACCACTTTTCCAGTCTCATCTTGTTTGTCATCATAGTTAAATAGGAAAATAAACCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCAGCCTCGTGCCGAATCTTGGCT] consensusID : consensus_10699#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 313 fasta sequence [GNGAAATGGGGCAANTATNGTCTTTNGATCATTAANGCGAAGATAATAGATANTTTNCTTGCNTNGCNCCAAGGCATNAGNAAATTGTTTGTTTTGCAANAAATATGCCCCCTATTGTTTGNGTCATTTACCAATTTTNCAGTNTCATGTTGTTTGTCATCATAGTTAAATGAAAATAAACCCAAAAGCGTCAGANACGTTGCTTGTTTNGGTCAAATCATAAATTTATTGGCANTNCAAACTTTTTACNCCAAAACCTNTAATAAGTTCAGTGAATACTCCGGGATCGCTTTNTATCAAACACCAATTACCA] [-] EMBL BE431297 [GNGAAATGGGGCAANTATNGTCTTTNGATCATTAANGCGAAGATAATAGATANTTTNCTTGCNTNGCNCCAAGGCATNAGNAAATTGTTTGTTTTGCAANAAATATGCCCCCTATTGTTTGNGTCATTTACCAATTTTNCAGTNTCATGTTGTTTGTCATCATAGTTAAATGAAAATAAACCCAAAAGCGTCAGANACGTTGCTTGTTTNGGTCAAATCATAAATTTATTGGCANTNCAAACTTTTTACNCCAAAACCTNTAATAAGTTCAGTGAATACTCCGGGATCGCTTTNTATCAAACACCAATTACCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 TTTTTCATAACCCTTACAGTTTTTATAGTTCTGTACATCAAGTAGGTCATTAATAAGAAA 60 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 ATAATACAAATACTTGCACAAATGGAAACTTTATATACATCTGACAACGAAAATTGTTTC 120 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 GCACCTACATAAAATTTGTTTCTAAAAAAGATGTACATATATAATATATTCTTTTAGACA 180 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 AATTTCACTTTCTTCGCAGCATTTGATGGGTGTAGAGCACTGCGTTCTTGTGCAACCTTC 240 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 TGAGCTTTTTCAACCAGACTAGTCAGTTGACCGTTTTCGCCCAGTATTTTGAGAAGCTCT 300 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 AATATAAGTGGCAAATAGTTGTGTCGACGACGAATGTTTTCTGCGCGATACGTTGCAATT 360 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 TTCTTCTTTTCACTGGCGATATTATTCGTTAGCTCTGTTATGTAGGCAGATTCTGGATCA 420 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 CTTGAGTCTATTTTATATCGCGCCAACTGTTTTTCATACATAACGAGTCGATTAGGAACT 480 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 -----------------------GTCTACACATTTCTCCATACGCTTCATTAGCAACGGA 37 consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 ACTGCCATTATATTGAACTTTCCGTCTACACATTTCTCCATACGCTTCATTAGCAACGGA 540 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 CGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGT 97 consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 CGGACCGAATCTATCCAAGATGAATTCTCAGGTAGTTTTCCGTGATCAACAGGGCCGGGT 600 consensus_10699#1 ------------------------------------------------------------ consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 TTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAA 157 consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 TTTAAGCCATCCAATTCGTACAAAGTACCATTAATAGGGACGTAACCAACGAAATGGTAA 660 consensus_10699#1 ----AACTTTANTATACATCTGACACGAAAAATGTTTTCGCACNTACATAAAATTGTTTC 56 consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAACTAAGTACA 217 consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 ACACCTTCACTTGACTTTGGGGTCTTCTCATCAAACTCAAAAAGCTGGTAA--------- 711 consensus_10699#1 TAAAAAAGATGTACATATATAATATATCTNTTAGACNAATTTNNNNNNNNNNNNNNNNTA 116 consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 TATTAGCAATACAGAGGAAAATTACTTGCTAAAGCTGTTATGTACAACTCTAATTTGATC 277 consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 -------------------------TTGCTAAAGCTGTTATGTACAACTCTAATTTGATC 746 consensus_10699#1 ATGGGTGTAGAGCACTGCGTTCTTGTGCAACTTCTGAGCTTTTCAACCAGACTAGTCAGT 176 consensus_10699#3 --------------------------------------------------------AGGG 4 consensus_10699#2 AGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCA-AATTCTGACACAAAAGACTTGA 336 consensus_10699#4 --------CAAATTTCATACTGT--ACTGTACTGTCA-AATTCTGACACAAAAGACTTGA 49 consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 AGAATTGCTTATTGCTGTACCTTTCATTGTACTGTCA-A-TTCTGACACAAAAGACTTGA 804 consensus_10699#1 TGACCGTTTTCGCCCAGTATTT-GAGAAGCTCTACTATAAGTGGCAAATAGTTGTGTCGA 235 consensus_10699#3 NNACCGTTTTCCCCNGGTATTTTNAGAAGCTCTACTATAAGTG-CAAATAGTTGTGTCGA 63 consensus_10699#2 AATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAA-GATATTAATA 395 consensus_10699#4 AATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAA-GATATTAATA 108 consensus_10699#5 -----------------------------------GNGAAATGGGGCAA-N-TATNGTCT 23 consensus_10699#0 AATTAGACAATGTTGGGCCAATGGGCACTTTGTCATCAATATTTAGCAA-GATATTAATA 863 consensus_10699#1 CGACGAATGTTTTCTGCGCGATACGTTGCAATTTTCTTCTTTTCACTGGCGATATTATTC 295 consensus_10699#3 CGACNAATGTTTTCTGCACNATACGNNGCAATTTTCTTNTTTTCACTGGCGATATTATTC 123 * *** consensus_10699#2 ATTGCTTGCGTCGCACAAGCA------------TTTGGAATTGTCTAACAGAAATGTATG 443 consensus_10699#4 ATTGCTTGCGTCGCACAAGCA------------TTTGGAATTGTCTAACAGAAATGTATG 156 consensus_10699#5 TTNGATCAT-TAANGCGAAGA------------TAATAGATANTTTNCTTGCNTNGCNCC 70 consensus_10699#0 ATTGCTTGCGTCGCACAAGCA------------TTTGGAATTGT---------------- 895 consensus_10699#1 GTA------------------------------CTTGAGTCTATTTTATATCGCGCCAAC 325 consensus_10699#3 NTNANCTCTGTTATGNANGCAGATTCTGGATCACTTGANTNTATTTTATATCCCGCCAAC 183 * * consensus_10699#2 AACA-ACTAATACACTACTTGTTTCGCAAAAAATATGCCCC---TATTGTTTGCGTCATT 499 consensus_10699#4 AACA-ACTAATACACTACTTGTTTCGCAAAAAATATGCCCC---TATTGTTTGCGTCATT 212 consensus_10699#5 AAGGCATNAGNAAATTGTTTGTTTTGCAANAAATATGCCCCC--TATTGTTTGNGTCATT 128 consensus_10699#0 ------------------TTGTTTCGCAAAAAATATGCCCC---TATTGTTTGCGTCATT 934 consensus_10699#1 TGTT-TTTCATACATAACGAGTCGATTAGGAACTACTGCCATTATATTGAACTTTCCGTC 384 consensus_10699#3 TGTT-TTTCATACATAACGAGTCNATTAAGAACTACNGCCATTATATTGAACTTTCCGNC 242 ** * ** ** ** ***** * consensus_10699#2 TAC-CACTTTTCCAGTCTCATC-TTGTTTGTCATCATAGTTAAATAGGAAAATAAA---- 553 consensus_10699#4 TAC-CACTTTTCCAGTCTCATC-TTGTTTGTCATCATAGTTAAATAGGAAAATAAA---- 266 consensus_10699#5 TAC-CAATTTTNCAGTNTCATG-TTGTTTGTCATCATAGTTAAAT--GAAAATAAA---- 180 consensus_10699#0 TAC-CACTTTTCCAGTCTCATC-TTGTTTGTCATCATAGTTAAATAGGAAAATAAA---- 988 consensus_10699#1 TACACATTTCTCCATACGCTTCATTAGCAACGGACGGACCGAATCTATCCAA-------- 436 consensus_10699#3 TACACATTTCTCCATACNCTTNATTANCAACNGNCNGACCNAATTTATNCAAGANNAATT 302 *** ** ** * ** * * ** * * ** ** consensus_10699#2 ------------CCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATA-AACTT 600 consensus_10699#4 ------------CCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATC--A-GCCTC 311 consensus_10699#5 ------------CCCAAAAGCGTCAGANACGTTGCTTGTTTNGGTCAAATCATA-AATTT 227 consensus_10699#0 ------------CCCAAAAGCGTCAGACACGTTGCTTGTTTCGGTCAAATCATA-AACTT 1035 consensus_10699#1 ------------------ATCAACAGGGCCGGGTTTTAAGCCATCCAATTCGTACAAAGT 478 consensus_10699#3 CTNAGGTAGTTTTCCNTGATCAACAGGGNCGGGTTTTAANCCATCCAATTCCTACAAAGT 362 * * *** ** ** *** ** * consensus_10699#2 CTTCGCACTCCAAACTTTCTACACCAAAACCTCTAATAAGTTCAGTGAA----------- 649 consensus_10699#4 GTGCCGAATCTTGGCT-------------------------------------------- 327 consensus_10699#5 ATTGGCANTNCAAACTTTTTACNCCAAAACCTNTAATAAGTTCAGTGAATACTCCGGGAT 287 consensus_10699#0 CTTCGCACTCCAAACTTTCTACACC------TCTAATAAGTTCAGTGAATACTCCGGGAT 1089 consensus_10699#1 ACCATTAATAGGGACGTAAC-CAACGAAATGGTAAACACCTTCACTTGACTTTGGGGTCT 537 consensus_10699#3 ACCATTAATANGGACGTNAC-CAACNGANNTGGNAACACCTCTACTTGACTTNGGGGTCT 421 * * * consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 CGCTTTNTATCAAACACCAATTACCA---------------------------------- 313 consensus_10699#0 CGCTTTCTATCAAACACCAATTACCACTACTTGACAAGCTTGAAGCTTG----------- 1138 consensus_10699#1 TCTCATCAAACTCAAAAAGCTGGTAATAATTTGATCAGAATTGCTTATTGCTGTACCTTT 597 consensus_10699#3 TCTCATAAAACNCAAAAAGCTGGTNA---TTTGCTAAAGCTT--TTA------------- 463 consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 ------------------------------------------------------------ consensus_10699#1 CATTGTACTGTCAAATTCTGACACAAAAGACTTGAAATTAGACAATGTTGGGCCAATGGG 657 consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 ------------------------------------------------------------ consensus_10699#4 ------------------------------------------------------------ consensus_10699#5 ------------------------------------------------------------ consensus_10699#0 ------------------------------------------------------------ consensus_10699#1 CACTTTGTCATCAATATTTAGCAAGATATTAATAAATTGTTTGTTTCGCAAAAAATATGC 717 consensus_10699#3 ------------------------------------------------------------ consensus_10699#2 --------------------------- consensus_10699#4 --------------------------- consensus_10699#5 --------------------------- consensus_10699#0 --------------------------- consensus_10699#1 CCCTATTGTTTGCGTCATTTACCCCTC 744 consensus_10699#3 --------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||