These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10722#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 543 fasta sequence [ACACGAGACGTGCAATTTTACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCACCATCACCTGGTCTCGTGT] [+] EMBL CD125278 [ACACGAGACGTGCAATTTTACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACC TTTTTTTGATTGAATTCTAAACCGGCTCCATTAATTGGCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGCAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACACGATTCATCATACACTGCTGTNTGACCATCATTTGTAACTGACTTAATACTTATTGGCCACATACTAGCTGCNTANCCATCACAGTTACAATCGTCATTCTCTCCAC ] [+] EMBL CD125279 [ACACGAGACGTGCAATTTTACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTCGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTGCAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTGGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCA ] [+] EMBL CD125266 [ TACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGCCATTCTCTCCA ] [+] EMBL CD125338 [ TACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTCTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAA TAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACCATCGTCATTCTCTCCA ] [+] EMBL CD125244 [ TACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCA TTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGACATTCTCTCCA ] [-] EMBL CD125327 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125320 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCANAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCACCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125221 [ ACGACCAATAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTNTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125253 [ ACGACCATTAAAGGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125356 [ ACGACCATTAAATGTTCCAGCAATACAGTGANAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTACTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125299 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAGCCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCCGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125231 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATT ATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCACCATCACCTGGTCTCGTGT] [-] EMBL CD125268 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCCAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125346 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCCCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125226 [ ACGACCATTAAATGTTCCAGCAATACAGTGANAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125229 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125322 [ ACGACCATTAAATGTTCCAGCAATACAGTGANAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCA CATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCACTCTCTCCAC ] [-] EMBL CD125298 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125237 [ ACGACCATTAAATGTTCCAGCAATACAGTGAAAACGTTCAGGTACAGTTTTCCATTTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAGTAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACGCCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAGTAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] [-] EMBL CD125267 [ ACGACCATTAAATGTTCCAGCAATACAGTGANAACGTTCAGGTACAGTTTTCCA TTTTTTGCTAAATGTACCATATCACCAGCATCTAGTACACCAAAACCAAATAAATGATTGAATTCTAAACCAGCACCATTAATTGTCCAATTATGATTATGTTGTCTATCGTATAAATGATTACGTTTAGAAGTAAGTACAGTAAGATGTTGTACATCTCTCCAAGTAAGCTCATTTTGAGCTTCTAATGCTAAAGCAAATACACCAGCTGCTTCTGGTGCTGCCGCTGATGTACCTGAATGATGAAGTGTACAATTTCCATATAAATCAATAGTTCCAACTCCAGCATCACGAAGAAATGGGCTCTTACCATTGGAAAATGTTGAAGCCAATGTTGAAGCACAAGATTCATCATAAACAGCTGTATGACCATCATTTGTAACTGAATTAATACTTATTGTCCACATACTAGCTGCATAACCATCACAATTACAATCGTCATTCTCTCCAC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||