cluster # 10729

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Schistosoma mansoni
cluster # 10729 cluster # 10729 Sequences # 20 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10729#0 length = 2210 sequences # 19

consensus_10729#1 length = 205 sequences # 1

consensusID : consensus_10729#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 2210
fasta sequence

                              [GCGTTATTTGCCATCACGTTGGGGGCTATGAAAGATTCTGTACCGGAAGTCGCCCTTCAGGGAATCGAGTTCTGGTCTACAGTTTGTGATGAAGAAATCGACTTATCTATTGACGTTGCCGAGTGCTTTGAGAAAGGTCAACCTCCAGCGGTTTCTAGCATGTTTTATGCCAAGGGAGCCTTGCAGTTTATCGTACCCATTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGATGATGACGAATGGAATCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCACAGTGTTGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAAGGATTGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCTGAAAGTGCTTATGATGCCGCCTCAGAAAATTCCGGTCATAATGGGGAACCGAGGACCTATATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCTAGTCGACCAGATGGTGGACAGCATAATCTTCGCAATGCAGCGTACTCAGCCTTGATGGCGCTTATGCGGTCTGCTGCTCAAGATTGTTATTGTGAAGTACAACGTGTAACACTGATTGTTCTTGAACGGTTAGAGTCAATAATAGGTTTGGAAAATCAAATTGTTTCACATCAAGACAGAGCACAATTTAACGATCTACAGTCACTTTTATGCGGCACTTTACAATCTGTTTTGAGAAAGATAAGTAAAGAGGATGCACCTGCGATATCAGACAAAGTAATGTTAGCCCTCATGTCCATGTTCCGAACTACTACTACACCGGTTACTGAAGGCTCTGGCGACCAATCTGTAGTCAACGGCGAAACAGATAAGACTAAATTCAGTGATGGTGTGCAAGAAGATGCATTACTTGCAGTATCTGTGCTTGTTGAAGCTGTTGGAGAGTCGTTTGTCAAATATGTGAATGATTTCATGCCAATTTTGGTAATTTGTTTACGAAACCATAGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGATATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATGATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACTTTTGGTGATCTATCTTTAGCTTTGGGTTCAGAGTTTTGGAAATATCTTCCTATTGTCTTAGAAACATTAAGTCAAGCTACACAAGCTGAAGTTAATTTAGAGGATCCTGATATGGTTGAATATCTCAATTCGTTGCGTACTAGTTGCTTAGAGGCTTATACTGGTATTATCCAAGGTCTTAAGGGAGATGGACCACAATCTACCGCAGCTTTGGAGTTTGTTGCTGGTCATGTATCTCACATATTGTCATTTATCCA-ACATATTGGAGCAGATTCAATCACAACTGAAGATCTTATATCTGCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTTGTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGAGGCAGACGTGCTAAAGCATCACGAACTAAAAATTTAGCAGTTTGGGCTACAAAAGAAATTCGAAAATTAAAAAATACAACTAATTCAACGGCTTCTTCTGTTTCTAATTCGAGTTTACCACATACAGCTACAACTATTCAAGCGTCACCTTCAGGATAAAAAAAATGTTCAGTTCAAATGACCCTCTATTTCCAATGAACAGCTTATCCTTATGATTTGTACATTCTACGAAAATTAAG-AAAAAAAACAACACTACCTTTTAATTGTCTTTTCCTTAATTAATATGCTTCTTCCTGTCACAAATGCACACACACATATATATATACATTACAAAGAGTTTCCCTAATTCTGTCTTTTATAATCAAATAATATAC]

[+] EMBL CD115425             [GCGTTATTTGCCATCACGTTGGGGGCTATGAAAGATTCTGTACCGGAAGTCGCCCTTCAGGGAATCGAGTTCTGGTCTACAGTTTGTGATGAAGAAATCGACTTATCTATTGACGTTGCCGAGTGCTTTGAGAAAGGTCAACCTCCAGCGGTTTCTAGCATGTTTTATGCCAAGGGAGCCTTGCAGTTTATCCCACCCATTTTGATGGAAATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD115281             [GCGTTATTTGCCATCACGTTGGGGGCTATGAAAGATTCTGTACCGGAAGTCGCCCTTCAGGGAATCGAGTTCTGGACTACAGTTTGTGATGAAGAAATCGACTTATCTATTGACGTTGCCGAGAGCTTTGAGAAAGGTCAACCTCCAGCGGTTTCTATCATGTTTTATGCCACGGGAGCCTTGCAGTTCATCGTACCCATTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGCTGACGACGAATGGAATCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCCCAGGTTTGACAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTCCAGAAAGTGCTCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD115560             [GCGTTATTTGCCATCACGTTGGGGGCTATGAAAGATTCTGTACCGGAAGTCGCCCTTCAGGGAATCGAGTTCTGGTCTACAGTTTGTGATGAAGAAATCGACTTATCTATTGACGTTGCCGAGTGCTTTGAGAAAGGTCAACCTCCAGCGGTTTCTAGCATGTTTTATGCCAAGGGAGCCTTGCAGTTTATCGTACCCATTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGATGATGACGAATGGAATCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCACAGTGTTGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTTCAGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD148150             [                                                                                                                                                                     TATGCCAAGGGAGCCTTGCAGTTTATCGTACCCATTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGATGATGACGAATGGAATCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCACAGTGTTGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGACTAGTTGAAGGATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD155868             [                                                                                                                                                                                                 TACCCATTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGATGATGACGAATGGATCCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCACAGTG TGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAAGGATTGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCTGAAAGTGCTTATGATGCCGCCTCAGAAAATTCCGGTCATAATAGGGAACCGAGGACCTATATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD188278             [                                                                                                                                                                                                       TTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGATGATGACGAATGGAATCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCACAGTGTTGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAAGGATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD117114             [                                                                                                                                                                                                                                                                         CCTCTGGTGTGTGTTTAATGCTACTGGCACAGTGTTGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAAGGATTGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCTGAAAGTGCTTATGATGCCGCCTCAGAAAATTCCGGTCATAATGGGGAACCGAGGACCTATATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD137592             [                                                                                                                                                                                                                                                                                                                AAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCCGACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGATCCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATTATCGAATTGTTGCGTGATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAAGGATCGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCTGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD116095             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAAGGATTGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCTGAAAGTGCTTATGATGCCGCCTCAGAAAATTCCGGTCATAATGGGGAACCGAGGACCTATATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCTAGTCGACCAGATGGTGGACAGCATAATCTTCGCAATGCAGCGTACTCAGCCTTGATGGCGCTTATGCGGTCTGCTGCTCAAGATTGTTATTGTGAAGTACAACGTGTAACACTGATTGTTCTTGAACGGTTAGAGTCAATAATAGGTTTGGAAAATCAAATTGTTTCACATCAAGACAGAGCACAATTTAACGATCTACAGTCACTTTTATGCAGCACTTTACAATCTGTTTTGAGAAAGATAAGTAAAGAGGATGCACCTGCGATATCAGACANAGTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD115988             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGTGAAACTCTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTNTGTTAACCGGATTAGTTGAAGGATTGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCTGAAAGTGCTTATGATGCCGCCTCAGAAAATTCCGGTCATAATGGGGAACCGAGGACCTATATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCTAGTCGACCAGATGGTGGACAGCATAATCTTCGCAATGCAGCGTACTCAGCCTTGATGGCGCTTATGCGGTCTGCTGCTCAAGATTGTTATTGTGAAGTACAACGTGTAACACTGATTGTTCTTGAACGGTTAGAGTCAATAATAGGTTTGGAAAATCAAATTGTTTCACATCAAGACAGAGCACAATTTAACGATCTACAGTCACTTTTATGCGGCACTTTACAATCTGTTTTGAGAAAGATAAGTAAAGAGGATGCACCTGCGATATCAGACAAAGTAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD116440             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAATGGGGAACCGAGGACCTATATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCTAGTCGACCAGATGGTGGACAGCATAATCTTCGCAATGCAGCGTACTCAGCCTTGATGGCGCTTATGCGGTCTGCTGCTCAAGATTGTTATTGTGGAGTACAACGTGTAACACTGATTGTTCTTGAACGGTTAGAGTCAATAATAGGTTTGGAAAATCAAATTGTTTCACATCAAGACAGAGCACAATTTAACGATCTACAGTCACTTTTATGCGGCACTTTACAATCTGTTTTGAGAAAGATAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD116394             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AATGGGGAACCGAGGACCTATATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCTAGTCGACCAGATGGTGGACAGCATAATCTTCGCAATGCAGCGTACTCAGCCTTGATGGCGCTTATGCGGTCTGCTGCTCAAGATTGTTATTGTGAAGTACAACGTGTAACACTGATTGTTCTTGAACGGTTAGAGTCAATAATAGGTTTGGAAAATCAAATTGTTTCACATCAAGACAGAGCACAATTTAACGATCTACAGTCACTTTTATGCGGTACTTTACAATCTGTTTTGAGAAAGATAAGTAAAGAGGATGCACCTGCGATATCAGACAAAGTAATGTTAGCCCTCATGTCCATGTTCCGAACTACTACTACACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD129038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGTAATGTTAGCCCTCATGTCCATGTTCCGAACTACTACTACACCGGTTACTGAAGGCTCTGGCGACCAATCTGTAGTCAACGGCGAAACAGATAAGACTAAATTCAGTGATGGTGTGCAAGAAGATGCATTACTTGCAGTATCTGTGCTTGTTGAAGCTGTTGGAGAGTCGTTTGTCAAATATGTGAATGATTTCATGCCAATTTTGGTAATTTGTTTACGAAACCATAGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGATATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATGATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACTTTTGGTGATCTATCTTTAGCTTTGGGTTCAGAGTTTTGGAAATATCTTCCTATTGTCTTAGAAACATTAAGTCAAGCTACACAAGCTGAAGTTAATTTAGAGGATCCTGATATGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD165793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCTGGCGACCAATCTGTAGTCAACGGCGAAACAGATAAGACTAAATTCAGTGATGGTGTGCAAGAAGATGCATTACTTGCAGTATCTGCGCTTGTTGAAGCTGTTGGAGAGTCGTTTGTCAAATATGTGAATGATTTCATGCCAATTTTGGTAATTTGTTTACGAAACCATAGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGATATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATGATGGAAATTTAACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACTTTTGGTGATCTATCTTTAGCTTTGGGTTCAGAGTTTTGGAAATATCTTCCTATTGTTTTAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD082520             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gaggGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGATATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATGATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACTTTTGGTGATCTATCTTTAGCTTTGGGTTCAGAGTTTTGGAAATATCTTCCTATTGTCTTAGAAACATTAAGTCAAGCTACACAAGCTGAAGTTAATTTAGAGGATCCTGATATGGTTGAATATCTCAATTCGTTGCGTACTAGTTGCTTAGAGGCTTATACTGGTATTATCCAAGGTCTTAAGGGAGATGGACCACAATCTACCGCAGCTTTGGAGTTTGTTGCTGGTCATGTATCTCACATATTGTCATTTATCCA ACATATTGGAGCAGATTCAATCACAACTGAAGATCTTATATCTGCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTTGTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGAGGCAGACGTGCTAAAGCATCACGAACTANAAATTTAGCAGTTTGGGCTACANAAGAAATTCGAAAATTAAAAAA                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CD076115             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATGGACCACAATCTACCGCAGCTTGGAAGTTTGTTGCTGGTCATGTATCTCACATATTGTCATTTATCCA ACATATTGGAGCAGATTCAATCACAACTGAAGATCTTATATCTGCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTTGTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGAGGCAGACGTGCTAAAGCATCACGAACTAAAAATTTAGCAGTTTGGGCTACAAAAGAAATTCGAAAATTAAAAAATACAACTAATTCAACGGCTTCTTCTGTTTCTAATTCGAGTTTACCACATACAGCTACAACTATTCAAGCGTCACCTTCAGGATAAAAAAAATGTTCAGTTCAAATGACCCTCTATTTCCAATGAACAGCTTATCCTTATGATTTGTACATTCTACGAAAATTAAG AAAAAAAACAACACTACCTTTTAATTGTCTTTTCCTTAATTAATATGCTTCTTCCTGTCACAAATGCACACACACATATATATATACATTACAAAGAGTTTCCCTAATTCTGTCTTTTATAATCAAATAATATAC]
[-] EMBL CD141541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TATTGTCA TTATCCACNNATATTGGAGCAGATTCAATCACANCTGAAGATCTTATATCTGCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTTGTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGGGGCAGACGTGCTAAAGCATCACGAACTAAAAATTTAGCAGTTTGGGCTACAAAAGAAATTCGAAAATTAAAAAATACAACTAATTCAACGGCTTCTTCTGTTTCTAATTCGAGTTTACCACATACAGCTACAACTATTCAAGCGTCACCTTCAGGATAAAAAAAATGTTCAGT                                                                                                                                                                                                          ]
[+] EMBL CD154486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCAGATTCAATCACAACTGAAGATCTTATATCTGCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTTGTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGAGGCAGACGTGCTAAAGCATCACGAACTAAAAATTTAGCAGTTTGGGCTACAAAAGAAATTCGAAAATTAAAAAATACAACTAATTCAACGGCTTCTTCTGTTTCTAATTCGAGTTTACCACATACAGCTACAACTATTCAAGCGTCACCTTCAGGATAAAAAAAATGTTCAGTTCAAATGACCCTCTATTTCTAATGAACAGCTTATCCTTATGATTTGTACATTCTACGAAAATTAAG AAAAAAAACAACACTACCTTTTAATTGTCTTTTCCTTAATTAATATGCTTCTT                                                                                  ]
[-] EMBL CD154371             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGATTCAATCACAACTGAAGATCTTATATCTGCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTTGTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGAGGCAGACGTGCTAAAGCATCACGAACTAAAAATTTAGCAGTTTGGGCTACAAAAGAAATTCGAAAATTAAAAAATACAACTAATTCAACGGCTTCTTCTGTTTCTAATTCGAGTTTACCACATACAGCTACAACTATTCAAGCGTCACCTTCAGGATAAAAAAAATGTTCAGTTCAAATGACCCTCTATTTCCAATGAACAGCTTATCCTTATGATTTGTACATTCTACGAAAATTAAGAAAAAAAAACAACACTACCTTTTAATTGTCCTTTCCTTAATTAATATGCTTCTTC                                                                                 ]




>consensus_10729#0
GCGTTATTTGCCATCACGTTGGGGGCTATGAAAGATTCTGTACCGGAAGTCGCCCTTCAG
GGAATCGAGTTCTGGTCTACAGTTTGTGATGAAGAAATCGACTTATCTATTGACGTTGCC
GAGTGCTTTGAGAAAGGTCAACCTCCAGCGGTTTCTAGCATGTTTTATGCCAAGGGAGCC
TTGCAGTTTATCGTACCCATTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGAT
GATGACGAATGGAATCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCACAGTGT
TGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCC
GACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGAT
CCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGT
GATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACT
CTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAA
GGATTGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCT
GAAAGTGCTTATGATGCCGCCTCAGAAAATTCCGGTCATAATGGGGAACCGAGGACCTAT
ATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCTAGTCGACCA
GATGGTGGACAGCATAATCTTCGCAATGCAGCGTACTCAGCCTTGATGGCGCTTATGCGG
TCTGCTGCTCAAGATTGTTATTGTGAAGTACAACGTGTAACACTGATTGTTCTTGAACGG
TTAGAGTCAATAATAGGTTTGGAAAATCAAATTGTTTCACATCAAGACAGAGCACAATTT
AACGATCTACAGTCACTTTTATGCGGCACTTTACAATCTGTTTTGAGAAAGATAAGTAAA
GAGGATGCACCTGCGATATCAGACAAAGTAATGTTAGCCCTCATGTCCATGTTCCGAACT
ACTACTACACCGGTTACTGAAGGCTCTGGCGACCAATCTGTAGTCAACGGCGAAACAGAT
AAGACTAAATTCAGTGATGGTGTGCAAGAAGATGCATTACTTGCAGTATCTGTGCTTGTT
GAAGCTGTTGGAGAGTCGTTTGTCAAATATGTGAATGATTTCATGCCAATTTTGGTAATT
TGTTTACGAAACCATAGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGAT
ATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATG
ATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACT
TTTGGTGATCTATCTTTAGCTTTGGGTTCAGAGTTTTGGAAATATCTTCCTATTGTCTTA
GAAACATTAAGTCAAGCTACACAAGCTGAAGTTAATTTAGAGGATCCTGATATGGTTGAA
TATCTCAATTCGTTGCGTACTAGTTGCTTAGAGGCTTATACTGGTATTATCCAAGGTCTT
AAGGGAGATGGACCACAATCTACCGCAGCTTTGGAGTTTGTTGCTGGTCATGTATCTCAC
ATATTGTCATTTATCCAACATATTGGAGCAGATTCAATCACAACTGAAGATCTTATATCT
GCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTT
GTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGAGGCAGACGTGCTAAAGCATCACGA
ACTAAAAATTTAGCAGTTTGGGCTACAAAAGAAATTCGAAAATTAAAAAATACAACTAAT
TCAACGGCTTCTTCTGTTTCTAATTCGAGTTTACCACATACAGCTACAACTATTCAAGCG
TCACCTTCAGGATAAAAAAAATGTTCAGTTCAAATGACCCTCTATTTCCAATGAACAGCT
TATCCTTATGATTTGTACATTCTACGAAAATTAAGAAAAAAAACAACACTACCTTTTAAT
TGTCTTTTCCTTAATTAATATGCTTCTTCCTGTCACAAATGCACACACACATATATATAT
ACATTACAAAGAGTTTCCCTAATTCTGTCTTTTATAATCAAATAATATAC

consensusID : consensus_10729#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 205
fasta sequence

                              [CTCGAGGCCAAGATTCGGCACGAGGGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGATATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATGATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACTTTTGGTGATCTATCTT]

[+] EMBL CD077573             [CTCGAGGCCAAGATTCGGCACGAGGGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGATATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATGATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACTTTTGGTGATCTATCTT]




>consensus_10729#1
CTCGAGGCCAAGATTCGGCACGAGGGAGAAACACAAGTTTGTATGAATGCAGTTGGACTG
TTAGGAGATATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATC
ACCATTATGATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATT
TTATCTACTTTTGGTGATCTATCTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10729#0      GCGTTATTTGCCATCACGTTGGGGGCTATGAAAGATTCTGTACCGGAAGTCGCCCTTCAG 60
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GGAATCGAGTTCTGGTCTACAGTTTGTGATGAAGAAATCGACTTATCTATTGACGTTGCC 120
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GAGTGCTTTGAGAAAGGTCAACCTCCAGCGGTTTCTAGCATGTTTTATGCCAAGGGAGCC 180
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TTGCAGTTTATCGTACCCATTTTGATGGAAATCCTTGCCCAGCAGGATGAATCAATGGAT 240
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GATGACGAATGGAATCCAAGTAAAGCCTCTGGTGTGTGTTTAATGCTACTGGCACAGTGT 300
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TGCGAAGATCCGATTGTCAATCTTGTCATACCATTTGTCAAGGAGAATATCAAGAAACCC 360
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GACTGGCGCTACAGAGATGCTGCCGTCATGAGCTTTGGCAGTATTCTTGAAGGTCCAGAT 420
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      CCTGCAGCACTCAAGCCCCTGGTAGAGTCTGCTATGCCTGTAATAATCGAATTGTTGCGT 480
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GATGAGTCACCAGCTGTTCGCGATACAGTTGCATGGACTATCGGACGTGTTTGTGAAACT 540
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      CTTCCAGAAGTTGCTCTACACGAAGCATATTTGGTTCCTTTGTTAACCGGATTAGTTGAA 600
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GGATTGTCCACTGAACCAAGAGTCGCCGCTAACGTTTGCTGGGCATTTTCTAGTCTGGCT 660
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GAAAGTGCTTATGATGCCGCCTCAGAAAATTCCGGTCATAATGGGGAACCGAGGACCTAT 720
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      ATACTATCTCAATACTTTAATGTGATCACAGAACGTCTACTAGCAACTTCTAGTCGACCA 780
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GATGGTGGACAGCATAATCTTCGCAATGCAGCGTACTCAGCCTTGATGGCGCTTATGCGG 840
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TCTGCTGCTCAAGATTGTTATTGTGAAGTACAACGTGTAACACTGATTGTTCTTGAACGG 900
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TTAGAGTCAATAATAGGTTTGGAAAATCAAATTGTTTCACATCAAGACAGAGCACAATTT 960
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      AACGATCTACAGTCACTTTTATGCGGCACTTTACAATCTGTTTTGAGAAAGATAAGTAAA 1020
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GAGGATGCACCTGCGATATCAGACAAAGTAATGTTAGCCCTCATGTCCATGTTCCGAACT 1080
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      ACTACTACACCGGTTACTGAAGGCTCTGGCGACCAATCTGTAGTCAACGGCGAAACAGAT 1140
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      AAGACTAAATTCAGTGATGGTGTGCAAGAAGATGCATTACTTGCAGTATCTGTGCTTGTT 1200
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GAAGCTGTTGGAGAGTCGTTTGTCAAATATGTGAATGATTTCATGCCAATTTTGGTAATT 1260
consensus_10729#1      ---------------------------------------------------CTCGAGGCC 9
                                                                           * *     

consensus_10729#0      TGTTTACGAAACCATAGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGAT 1320
consensus_10729#1      AAGATTCGGCACGAGGGAGAAACACAAGTTTGTATGAATGCAGTTGGACTGTTAGGAGAT 69
                           * **  ** *  ********************************************

consensus_10729#0      ATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATG 1380
consensus_10729#1      ATGTGTCGCGTTTTGAACAAGAACTTACTCCCACACTGTGATGGTCTTATCACCATTATG 129
                       ************************************************************

consensus_10729#0      ATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACT 1440
consensus_10729#1      ATGGAAATTTTACAAGATATAAATGCGCACAAATCTCTTCGTCCTGCTATTTTATCTACT 189
                       ************************************************************

consensus_10729#0      TTTGGTGATCTATCTTTAGCTTTGGGTTCAGAGTTTTGGAAATATCTTCCTATTGTCTTA 1500
consensus_10729#1      TTTGGTGATCTATCTT-------------------------------------------- 205
                       ****************                                            

consensus_10729#0      GAAACATTAAGTCAAGCTACACAAGCTGAAGTTAATTTAGAGGATCCTGATATGGTTGAA 1560
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TATCTCAATTCGTTGCGTACTAGTTGCTTAGAGGCTTATACTGGTATTATCCAAGGTCTT 1620
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      AAGGGAGATGGACCACAATCTACCGCAGCTTTGGAGTTTGTTGCTGGTCATGTATCTCAC 1680
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      ATATTGTCATTTATCCAACATATTGGAGCAGATTCAATCACAACTGAAGATCTTATATCT 1740
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GCTTCATGTGGACTGATCGGTGATCTTGTATCGGCTTATGGTAGTAGTATTTTATCACTT 1800
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      GTGGAAGTTGATGGAATTGCTTCTGTTTTACAAAGAGGCAGACGTGCTAAAGCATCACGA 1860
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      ACTAAAAATTTAGCAGTTTGGGCTACAAAAGAAATTCGAAAATTAAAAAATACAACTAAT 1920
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TCAACGGCTTCTTCTGTTTCTAATTCGAGTTTACCACATACAGCTACAACTATTCAAGCG 1980
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TCACCTTCAGGATAAAAAAAATGTTCAGTTCAAATGACCCTCTATTTCCAATGAACAGCT 2040
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TATCCTTATGATTTGTACATTCTACGAAAATTAAGAAAAAAAACAACACTACCTTTTAAT 2100
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      TGTCTTTTCCTTAATTAATATGCTTCTTCCTGTCACAAATGCACACACACATATATATAT 2160
consensus_10729#1      ------------------------------------------------------------
                                                                                   

consensus_10729#0      ACATTACAAAGAGTTTCCCTAATTCTGTCTTTTATAATCAAATAATATAC 2210
consensus_10729#1      --------------------------------------------------