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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10754#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 2058 fasta sequence
[AAGATGTCATCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTATGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTAAACATAAGAATATATGCCCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGT-TGGAGTACAGAAAGAT-AAAATGTTGGGTT-CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA-TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT-GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT-CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC-GTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTC-AACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATTCATTCCATTCAGTTTTTTTAATGAAGA-TCCCACTATTAC-TACATATAGAAAATTGGTTTCTGGTGAATT-AAAATATATAT]
[+] EMBL BF936698 [AAGATGTCATCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTATGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTAAACATAAGAATATATGCCCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGTGTGGAGTACAGAAAGATAAAAATGTTGGGTTCCCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGATTTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCCGTCAGGAGTTGGAAGTGTCTGTCAA ]
[-] EMBL CD188066 [ ggatATGTACGGGAAGAGGTACGGACATTACCCACCACTCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTATGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTAAACATAAGAATATATG CCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAG TTTGAGACAG ]
[+] EMBL CD096338 [ AGCGGCCCATTAGAGTTTTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGT TGGAGTACAGAAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCCTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGG ]
[-] EMBL CD096487 [ GCGGCCCATTAGAGTTNTATGGTCGTCAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGAGAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGTGATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGT TGGAGTACAGAAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGA ]
[+] EMBL CD196887 [ ATTTGTGATTTTATGT TGGAGTACAGAAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGCTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTA ]
[+] EMBL CD095133 [ AAAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTATGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGATGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTCCACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGA ]
[-] EMBL CD094456 [ AAGAT AAAATGTTGGGTT CCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTCCACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAA ]
[-] EMBL CD060341 [ AAAGGTGGACCTACAAGTACGCTATAATGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCTAGCCTTATACCTAAAACTCTGTTATCTAGCTCAGTAGTATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTTACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTTCCTGGTTTGCTCATATGTTGCATACACGTAT ]
[+] EMBL CD079267 [ TGA TTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTT GAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACG ]
[-] EMBL CD161345 [ TACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCATTGTAGTTTAACACCTATTCAAATGTTATATCTTACCCTTGGATATGATTGGTT CTTGTTTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGT ]
[+] EMBL CD068502 [ TGATGGGTT CTTG TGGTCATAAATTGAAAACACGTATGGAA TGGGTGAAGAAATACTCCGATTTACTTTTCAATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATGGGA ]
[+] EMBL CD083896 [ CGTTTATTGATTTACG TCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCG ]
[+] EMBL CD080172 [ TTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTT ATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTC AACAGTAATGATGAATATTGTTATTTGTTTGACCGACTGCTNTAGTTAATTCATTCCATTCAGTTTTTTTAATGAAGA TCCNACTATTAC TACATATAGAAAATTGGTTTCTGGTGAATT AAAATATATA ]
[+] EMBL CD079167 [ ATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTAAAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTTGATTAAGC AAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTC AACAGTAATGATGATAATTGTTATTTGTTTGACCGACTG ]
[+] EMBL CD078493 [ GAATCATCAACAGGTCATGAAAACTATGCATATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATGCTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTCAAACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATTCATTCCATTCAGTTNTTTTAATGAAGATTCCCACTATTACTTACATAT ]
[-] EMBL CD072965 [ AATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGATCAATATGTC GTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTTTATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAAATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCCTTTACCTTCAAACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATTCATTCCATTCAGTTTTTTTAATGAAGATTCCCACTATTACTTACATATAGAAAATTGTTTTCTGTTGAATTAAAAATATATAT]
[+] EMBL AI739701 [ CATCCTCATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAGTAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGGTTGATTTTTCCATTGCAACATCTTATCTATGTATTTTGGTGGTAATTTATTCTTTTTTTATGATCAATATGTCGGTAGTAGGATTAACAATACAATAAGTTGATTAA ]
consensusID : consensus_10754#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 463 fasta sequence
[CGGCACGAGGGTCACCTATATTTGTGATTTTATGTTGGAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCCTTGTAGT]
[+] EMBL CD083437 [CGGCACGAGGGTCACCTATATTTGTGATTTTATGTTGGAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAAGGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGTATATGGCGTGATTCTGGTTATGCTATGCATCATGTATACTTTGACTGGAATCGGTCAGGAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAGAATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGCTTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGGATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGCCTTGTAGT]
consensusID : consensus_10754#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 277 fasta sequence
[TTAAGTTGTATAAATTTGTCCTAGAGATTTTATACGAATGTTGGATGTTACGAAGGAAGATGTCGTCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTA]
[-] EMBL CD185938 [TTAAGTTGTATAAATTTGTCCTAGAGATTTTATACGAATGTTGGATGTTACGAAGGAAGATGTCGTCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTC ]
[+] EMBL CD063505 [ gttggccatGATTTCTCCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTA]
consensusID : consensus_10754#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 261 fasta sequence
[CGCGGCCACGAATTCGGTCCGAGGTGTACAGGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTCTTGGATGAAGACATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATC]
[+] EMBL CD077612 [CGCGGCCACGAATTCGGTCCGAGGTGTACAGGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTTCCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCTTTGAATTCTTGGATGAAGACATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTGGACCCATTACCAACGAATC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10754#0 AAGATGTCATCGAACTACTTAGTTTCATGCTGGACGCTGATTTTAACGAACAACTATTGA 60
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 AGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGAGG 120
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 ACTGTCCTGCTGAAATTTTGGAGAACATGAACGGTTATATGTGTGGACATTACCCACCAC 180
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TCATTGCTATTCCCCGTACTCGACATTTATCTTCATCATTGGCCGATTTAGGTCAGCTTA 240
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TGCTTCAGTCAAAGTTTGCTCGCTGCCGAACAAGATTTGTTGTCCCTTCCTTTTCTTTTA 300
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 AACATAAGAATATATGCCCGGTGTAGTACTTTAAGCGGCCCATTAGAGTTTTATGGTCGT 360
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 CAAGTTGCTACAGCTGCAGGTTTTACTTTTGATGGACATGTCAGTAACTCTTCAGGAGGA 420
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 GAGCTTCCAGATACAAGTTTTGAGACAGAAAACGGACGTCAGAGTTTGGAAAAATTACGT 480
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 GATGATGATTGTGAATTAATTCGTCGTTTAAATGTCACCTATATTTGTGATTTTATGTTG 540
consensus_10754#1 -----------------------CGGCACGAGGGTCACCTATATTTGTGATTTTATGTTG 37
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 GAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAA 600
consensus_10754#1 GAGTACAGAAAGATAAAATGTTGGGTTCCAATTAGTTCATCAGAAAAGGTGGACCAACAA 97
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 GGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGT 660
consensus_10754#1 GGACGCTATAATGATTTCGTAGTCATACCTCTCCCTTATCCTGGCAGCGAATTTTTCCGT 157
consensus_10754#3 ---------------------------------------CGCGGCCACGAA---TTCGGT 18
consensus_10754#2 ---------------------------------------------------TTAAGTTGT 9
**
consensus_10754#0 ATATGGC-GTGATTCTGGTTAT-GCTATGCATCATGTATACTTTGACTGGAATCGGTCAG 718
consensus_10754#1 ATATGGC-GTGATTCTGGTTAT-GCTATGCATCATGTATACTTTGACTGGAATCGGTCAG 215
consensus_10754#3 CCGAGGT-GT-ACAGGAATTATCACTTCGCAGAGTCTATGATATTCACGTTACCGAT--- 73
consensus_10754#2 ATAAATTTGTCCTAGAGATTTT--ATACGAATGTTGGATGTTACGAAGGAAGATGTC--- 64
** ** * * * * * ** * * *
consensus_10754#0 GAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAG 778
consensus_10754#1 GAGTTGAAGTGTCTGTCAATCCAAGCCTTATACCAAAAACTCTGTTATCTAGCTCAGTAG 275
consensus_10754#3 GGGTCTAAAAGTTCA--GATTCGGA--TGATTCT------TCGTTTATTGATTTACGTTC 123
consensus_10754#2 --GTCGAACTACTTA--GTTTCATGCTGGACGCTGA------TTTTAACGAACAACTATT 114
** ** * * * * *** *
consensus_10754#0 AATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGC 838
consensus_10754#1 AATGGAGCTTGTACAAGTCCTGGGATATTTATACAATCACTGTGAACTACATGAAGTTGC 335
consensus_10754#3 CAGTGATGATTTACAACCCTTAAGGCAATCA--CGATTGG-AAGAACTAT-CAAATTTAT 179
consensus_10754#2 GAAGTGTTACCCAAAGGAAATATATAAAATAAACGATATCTGCAACACACTAACATTTGA 174
* * * * * * * ** * * * **
consensus_10754#0 TTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGG 898
consensus_10754#1 TTCTTGGCTTACTCTACGAAGGTGCTGGAGGTTTACTATTACATTGTGTTTCTGGATGGG 395
consensus_10754#3 TCTTTGAATTCTTGGATGAAGACATTAAAAGACGTGAAGTTCAATCTACTATCA-ACAGT 238
consensus_10754#2 GGACTGTCCTGCTGAAGTAAGCTGTCTAAAATTTTGTTCTTCGCTAAGATTTTGGAGAAC 234
** * * * *** * * * * * *
consensus_10754#0 ATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGC 958
consensus_10754#1 ATCGTACACCGCTGTTTATTTGTCTACTTCGTTGTTTACTTTGGGCTGATGATTTAATGC 455
consensus_10754#3 ATTGGAC-CCATTACCAACGAATC------------------------------------ 261
consensus_10754#2 AT-GAACGGTTATATGTGTGGACATTACCCACCACTCATTGCTA---------------- 277
** * ** *
consensus_10754#0 ATTGTAGTTTAACACCTATTCAAATGTTATATCTTACTCTTGGATATGATTGGTTCTTGT 1018
consensus_10754#1 CTTGTAGT---------------------------------------------------- 463
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TTGGTCATAAATTGAAAACACGTATGGAATTGGGTGAAGAAATACTCCGATTTACTTTTC 1078
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 AATTTATCGGTGAAATGGCTAAATGTACAGAATTATCACTTCGCAGAGTCTATGATATTC 1138
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 ACGTTACCGATGGGTCTAAAAGTTCAGATTCGGATGATTCTTCGTTTATTGATTTACGTT 1198
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 CCAGTGATGATTTACAACCCTTAAGGCAATCACGATTGGAAGAACTATCAAATTTATTCT 1258
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TTGAATTTTGGAATGAAGAAATTAAAAGACGTGAAGTTCAATCTACTATCAACAGTATTG 1318
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 GACCCATTACCAACGAATCTGTTGTTGTGGATAAAAATGCTCAGTTGATATCGAATTCTA 1378
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 AAGAAAAATCAACTTTTAACAATGATGATGAATCATCAACAGGTCATGAAAACTATGCAT 1438
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 ATAGAAATAGCAATAAACCCTCTGAAAATCAAAATTCCATTGTTTTTCAAATATCAAATG 1498
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 CTTTAAATTCAGCTGTATCAGTGGTTACCTCAAATTTTGTCACACCATTATTATCATCCT 1558
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 CATCGTCGTCATCAGTAGCAGCATCATCACCAGTATCATCTTCAAACTCAATCAGAACAG 1618
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TAAATGAGGGTATCGAAGATCCCCCTACTACCACATGAGTCACTATTCTTTCTTTGTTTG 1678
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 ATTTTTCCATTGCAACATCTTATCTATGTATTTTGTTGTTATTTTATTCTTTTTTTATGA 1738
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TCAATATGTCGTAGTAGAATTAACAATACAATAAGTTGATTAAGCAAAAAAATGTCCGTT 1798
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TATCTTTTTAATTTCTTCAAGATCATCAAATAAGTAACTCTATCAATTCTATATATTTAA 1858
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 ATTGTAATATTTAATACATTATAACATTGATATAATGACTTGTCTTTTTTGTGTGTATCC 1918
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TTTACCTTCAACAGTAATGATGATAATTGTTATTTGTTTGACCGACTGCTTTAGTTAATT 1978
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 CATTCCATTCAGTTTTTTTAATGAAGATCCCACTATTACTACATATAGAAAATTGGTTTC 2038
consensus_10754#1 ------------------------------------------------------------
consensus_10754#3 ------------------------------------------------------------
consensus_10754#2 ------------------------------------------------------------
consensus_10754#0 TGGTGAATTAAAATATATAT 2058
consensus_10754#1 --------------------
consensus_10754#3 --------------------
consensus_10754#2 --------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||