These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10756#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 993 fasta sequence [GACTGGTTTAGGATTAAGCATAAAGTTAAGAAATAACTCTTTGCATCGGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC-GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA-GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTTACATTCGTGCCCCGTCCTCCGATTTCCATACGTTTCGACGAAATAGTAGCTGTACATTTTCCCGTGGGACAGGTGCTCAAAGATCT] [+] EMBL CD182121 [GACTGGTTTAGGATTAAGCATAAAGTTAAGAAATAACTCTTTGCATCGGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGNAATGCGTCT ] [+] EMBL CD170558 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAG ] [+] EMBL CD170499 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAGATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCGAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCTGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGACCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACANGT CCCGGAA ] [+] EMBL CD170581 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTGGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGCGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGA ] [+] EMBL CD170518 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC AGGNTCTGTATGATCAGAAAGTTACA GTCCCCGGA ] [+] EMBL CD170651 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGTCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGT GCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GNTCCCGGA ] [+] EMBL CD170507 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCATCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGNTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGNTGTGGCTCGCGTGTTC AGGTTCTGTATGATCAG AAGTTACA GTCCCCGGAA ] [+] EMBL CD170662 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAGATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCGAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCTGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGACCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTT AAGGTTCTGTATGATCAGAAAGNTACA GTCCCCGGA ] [+] EMBL CD170548 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC AGGNTCTGTATGATCAGAAAGNTACA GTCCCCGGA ] [+] EMBL CD170516 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGAGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC AGGTTCTGTATGATCAGAAAGTTACA GTCCCGGGA ] [+] EMBL CD170531 [ TAAGCAATGTTGCAAATGCTGTTTTGAACAAAAACGGGATTATTTTTGAATTTCACCTGAATGATGAAGCTGAAATTTGCTTATCTGAAATGCGTCTGTACACTCCGGGAACTGAAGCTGATAGGGAAGGCAAAGCCCCCGCTATATATTCTAAAGTTACTCAAAAGGCAGATATTATTCAGGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAG ] [+] EMBL CD148287 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATGATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCANAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTANAGAGAGGATTTACAT ] [+] EMBL CD148358 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAATTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCGTCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCANAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTANAGAGAGGATTTACAT ] [+] EMBL CD148362 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGCGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTC ] [+] EMBL CD148302 [ TATTCTAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGNCAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTACAGAGAGGATTTACAT ] [+] EMBL CD165879 [ TAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTG ] [+] EMBL CD165815 [ TAAAGTTACTCAAAAGGCAGATATTATTCAAGTTACGGGTGATTTCTTGGCTGAATTCAAACAATTGCAGTGTCTTCAACCTCGTGGCCGTTATGATGTTAAGTTATATCCAAGTTTTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTAT ] [+] EMBL CD164396 [ cgtgggcacTATCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGATGGTGCTTCCTCATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGGAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGG ] [-] EMBL CD072138 [ TCATCCCGAT ATCGGGCAGATATTCTTGNCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTTACATT ] [-] EMBL CD165872 [ ATCCCGATAATC GGCAGATATTCTTTGCTGTTCAACTTGATCCACCGATCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACATAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAACTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATGATCAGAAAGTTACA GTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCATGCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTGACATTCGTGCCCCGTCCTCCGATTTCCATACGTTTCGACGAAATAGTAGCTGTACATTTTCCCGTGGGACAGGTGCTCAAAGATCT] consensusID : consensus_10756#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 485 fasta sequence [GGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCNTGTTTTGAACAAAAACGAGGATTATTTTNTGAATTTCACCNTGAATNGATGAAGCTNGAAATTNTGCTTATTCTGAAATGCGTTCTNGTACACTTCACGGGAACTGAAGCNNTGATAGGGNNAAGGCAAANNGCCCCCGNNCTATATATGTNNCTAAAGTTATCTTCTAAAAGGCAGNNATATTATTNNCAAGTTACNNGGGTGATTGTCTTNNGGCTGAATTNNCAAACAATTNNGCAGNTGTCTNTCAACCTCNGTGGCCGNTTATGATGTTAAGTTATATCC] [-] EMBL CD186256 [GGTATGATGGCTTTGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAATTGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGATGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGCAAATGCNTGTTTTGAACAAAAACGAGGATTATTTTNTGAATTTCACCNTGAATNGATGAAGCTNGAAATTNTGCTTATTCTGAAATGCGTTCTNGTACACTTCACGGGAACTGAAGCNNTGATAGGGNNAAGGCAAANNGCCCCCGNNCTATATATGTNNCTAAAGTTATCTTCTAAAAGGCAGNNATATTATTNNCAAGTTACNNGGGTGATTGTCTTNNGGCTGAATTNNCAAACAATTNNGCAGNTGTCTNTCAACCTCNGTGGCCGNTTATGATGTTAAGTTATATCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10756#0 GACTGGTTTAGGATTAAGCATAAAGTTAAGAAATAACTCTTTGCATCGGTATGATGGCTT 60 consensus_10756#1 -----------------------------------------------GGTATGATGGCTT 13 ************* consensus_10756#0 TGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAAT 120 consensus_10756#1 TGGTGAAATCGAAGCAGAAAAGGTTGGGAGCTTTTTTAAAAAGTATTTCGACGTCGAAAT 73 ************************************************************ consensus_10756#0 TGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGA 180 consensus_10756#1 TGTGAAGCGTGAGCTGTGCTACAAAGGCTACAATTGGGGAGACGTGGATTTCGATGGCGA 133 ************************************************************ consensus_10756#0 TGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGC 240 consensus_10756#1 TGTTCTCGAGTTTTCAGTTAAAAACGCTATGGCTTTTGAGGTTCCTCTAAGCAATGTTGC 193 ************************************************************ consensus_10756#0 AAATGCT-GTTTTGAACAAAAACGAG-ATTATTTTT-GAATTTCACCTGAA--TGATGAA 295 consensus_10756#1 AAATGCNTGTTTTGAACAAAAACGAGGATTATTTTNTGAATTTCACCNTGAATNGATGAA 253 ****** ****************** ******** ********** * ****** consensus_10756#0 GCTGAAA--TTTGCTTAT-CTGAAATGCGTC--TGTACACTCC--GGGAACTGAAGCTG- 347 consensus_10756#1 GCTNGAAATTNTGCTTATTCTGAAATGCGTTCTNGTACACTTCACGGGAACTGAAGCNNT 313 *** ** * ******* *********** ******* * ************ consensus_10756#0 ---ATAGGGAAGGCAAAGC--CCCCGCTATATAT-----TCTAAAGTTACTC---AAAAG 394 consensus_10756#1 GATAGGGNNAAGGCAAANNGCCCCCGNNCTATATATGTNNCTAAAGTTATCTTCTAAAAG 373 * * ******** ***** ***** ********* ***** consensus_10756#0 GCAGATAT----TATTCAAGTTACGGG--TGATT---TCTTGGCTGAATTCA--AACAAT 443 consensus_10756#1 GCAGNNATATTATTNNCAAGTTACNNGGGTGATTGTCTTNNGGCTGAATTNNCAAACAAT 433 **** ** * ******** * ***** * ********* ****** consensus_10756#0 TGCA---GTGTCTT-CAACCTCG-TGGCCGTT-ATGATGTTAAGTTATATCCAAGTTTTA 497 consensus_10756#1 TNNGCAGNTGTCTNTCAACCTCNGTGGCCGNTTATGATGTTAAGTTATATCC-------- 485 * ***** ******* ****** * ******************* consensus_10756#0 TCCACTTGCATGGCAAGTCTTACGACTTTAAAGTTCCAAAGAATACTATTACTCGGTTGA 557 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 TGGTGCTTCCTCATCCCGATAATCGGCAGATATTCTTTGCTGTTCAACTTGATCCACCGA 617 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 TCAAACATGGTCAAACCAGATATCATTTTGTAGTTTCCCTTTTCGACAAGGATTCGCACA 677 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 TAAACTTAGAGATGGCTGCAACAGAAGACTGGCTTCAGGAGCAGTTCAATGGAAAATTAA 737 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 CTCGAAATATTTCCGGACCGGAATATGAAGTTGTGGCTCGCGTGTTCAAGGTTCTGTATG 797 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 ATCAGAAAGTTACAGTCCCCGGAAGCTTCTCTGCAAAAGGCGGTGGTTGTGCAGTTGCAT 857 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 GCAGTTATAAAGCGTCTGTTGGTTTGTTGTATCCATTAGAGAGAGGATTTACATTCGTGC 917 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 CCCGTCCTCCGATTTCCATACGTTTCGACGAAATAGTAGCTGTACATTTTCCCGTGGGAC 977 consensus_10756#1 ------------------------------------------------------------ consensus_10756#0 AGGTGCTCAAAGATCT 993 consensus_10756#1 ---------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||