These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10771#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1584 fasta sequence [TTCGCTGGTGCGGTTACCGTGTGCTTTTTGGATAGTCCAGTCAGTATTTATTGTATATCAATTTCTCTTTAACCGATATGGGAAATATCCTGGGGCTCCCGGGTTTGCAACAAACATTGAATACAGTACTTCGTAATGTTGTCAATCAGTTGGTCGTTCTCCCAAATCGTCTACCGGTTCAACTGGTTCCTGACATTGACATACAGCGTTTGAAATATCCATTGCCTCAAGGCGTTCTTCATATCAATATCATATCTGGTCGAAATCTTAAAGCAGGTGATAAAAATGTGATTGGACATAATACATCTGATCCATATTGTGTTATACGAGTTGGTGCTAGGACGTTCACTACTTCTGTTGTTAAAGAAACACTAGAACCAGTTTGGAACCAACATTCTGAGTCAATCGTCGACATTTGTCATGGTCAGTCAGTAACATTTGAAGTATACGATAAAGACCAAGGGAACAAAGATGATTATTTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGTGAAGGTGAAATAGATACGTGGTCCTCATTAGAAGGGGTAAAAACTGGTTCATTACACATTCAATTAACGTGGTTTCGATTGTCAAATCATGAAGTGGATTTTGCACAGTCAATGGAACAGGCTCTGCAGTATCGTAAAGCGTCCGGACGAAGTATGAGTTCAGGATTTTTATACGTTGTTATTGAACAAGCGAATAATTTGCCACCCGTAAAACAACTACAGGAACCTTCACCATTTTGTAATATCCATCTAGGACGTGATTATCAAACAAACGAAGTTAAAG-AAAAAACACAAAATCCTGTTTGGAACTCTGTGCATCATTTT-CTTGTTAGTGATCCAAACGTTGATATACTTCAGCTTATTATACGTGACAGCCGAACGG-AGACAAAACTAGGATCCTGTAACATCTCACTACAAACCTTATTAACACAGAAGAATATGTCTGTCACGCGACCATTCACC-TTACAAGATACAGGTC-GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG-CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATT--GGGTCGTATTCGTCTAAC-TATTCAGTTTCATACTCTATCGAACTAT-TTAGAAGTAACAGTACATGAATGTCAACATTT-AAGCGGTGTTGATAAAGACGGTCTATCTGATCCATATGTAAAACTTTATCTTATGGATTTACACGAAAACATGGTCAGTGATTCAAAAAAGACTAAAACTGTTAAAGATAACTTGGACCCAAAGTACGAAGAAAGTTTTTCAGTTTTCCGATTGGAGGCTGACCACCTTCCATTGACCATTC] [-] EMBL CD115294 [TTCGCTGGTGCGGTTACCGTGTGCTTTTTGGATAGTCCAGTCAGTATTTATTGTATATCAATTTCTCTTTAACCGATATGGGAAATATCCTGGGGCTCCCGGGTTTGCAACAAACATTGAATACAGTACTTCGTAATGTTGTCAATCAGTTGGTCGTTCTCCCAAATCGTCTACCGGTTCAACTGGTTCCTGACATTGACATACAGCGTTTGAAATATCCATTGCCTCAAGGCGTTCTTCATATCAATATCATATCTGGTCGAAATCTTAAAGCAGGTGATAAAAATGTGATTGGACATAATACATCTGATCCATATTGTGTTATACGAGTTGGTGCTAGGACGTTCACTACTTCTGTTGTTAAAGAAACACTAGAACCAGTTTGGAACCAACATTCTGAGTCAATCGTCGACATTTGTCATGGTCAGTCAGTAACATTTGAAGTATACGATAAAGACCAAGGGAACAAAGATGATTATTTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGTGAAGGTGAAATAGATACGTGGTCCTCATTAGAAGGGGTAAAAACTGGTTCATTACA ] [-] EMBL CD188112 [ AGCGTTTGAAATATCCATTGCCTCAAGGCGTTCTTCATATCAATATCATATCTGGTCGAAATCTTAAAGCAGGTGATAAAAATGTGATTGGACATAATACATCTGATCCATATTGTGTTATACGAGTTGGTGCTAGGACGTTCACTACTTCTGTTGTTAAAGAAACACTAGAACCAGTTTGGAACCAACATTTTGAGTCAATCGTCGACATTTGTCATGGTCAGTCAGTAACATTTGAAGTATACGATAAAGACCAAGGGAACAAAGATGATTATTTAGGTTGTACTTCGATACCAGTT ] [+] EMBL CD189233 [ AACATTTGAAGTATACGATAAAGACCAAGGGAACAAAGATGATTATTTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGAGAAGGTGAAATAGATACGTGGTCCTCATTAGAAGGGGTAAAAACTGGTTCATTACACATTCAATTAACGTGGTTTCGATTGTCAAATCATGAAGTGGATTTTGCACAGTCAATGGAACAGGCTCTGCAGTATCGTAAAGCGTCCGGACGAAGTATGAGTTCAGGATTTTTATACGTTGTTATTGAACAAGCGAATAATTTGCCACCCGTAAAACAACTACAGGAACCTTCACCATTTTGTAATATCCATCTAGGACGTGATTATCAAACAAACGAAGTTAAAGAAAAAAACACANAATCCTGTTTGGAACTCTGTGCATCATTTT CTTGTTAGTGATCCAAACGTTGATATACTTCAGCTTATTATACGTGACAGCCGAACGGNAGAC AAACTAGGATCCTGTAACATCTCACTACAAACCTTATTAACACAGAAGAATATGTCTGTCACGCGACCATTCACCTTTAC AGATACAGGTCGGGGAATCATCAACCATTTACATGCATTTACAATTGTTG ] [-] EMBL CD189448 [ ACATTTGAAGTATACGATAAAGATCAAGGGAACAAAGATGATTATTTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGTGAAGGTGAAATAGATACGTGGTCCTCATTAGAAGGGGTAAAAACTGGTTCATTACACATTCAATTAACGTGGTTTCGATTGTCAAATCATGAAGTGGATTTTGTACAGTCAATGGAACAGGCTCTGCAGTATCGTAAAGCGTCCGGACGAAGTATGAGTTCAGGATTTTTATACGTTGTTATTGAACAAGCGAATAATTTGCCACCCGTAAAACAACTACAAGAACCTTCACCATTTTGT ] [+] EMBL AA559497 [ TTCATTACACATTCAATTAACGTGGTTTCGATTGTCAAATCATGAAGTGGATTTTGCACAGTCAATGGAACAGGCTCTGCAGTATCGTAAAGCGTCCGGACNAAGTATGAGTTCAGGATTTTTATACGTTGTTATTGAACAAGCGAATAATTTGCCACCCGTAAAACAACTACAGGAACCTTCACCATTTTGTAATATCCATCTAGGACGTGATTATCAAACAAACGAAGTTAAAG AAAAAACACAAAATCCTGTTTGGAACTCTGTGCATCATTTTCCTTGTTAGTGATCCAAA ] [+] EMBL CD178249 [ ATTTTTATACGTTGTTATTGAACAAGCGAATAATTTGCCACCCGTAAAACAACTACAGGAACCTTCACCATTTTGTAATATCCATCTAGGACGTGATTATCAAACAAACCAAGTTAAAG AAAAAACACAAAATCCTGTTTGGAACTCTGTGCATCATTTT CTTGTTAGTGATCCAAACGTTGATATACTTCAGCTTATTATACGTGACAGCCGAACGG AGACAAAACTAGGATCCTGTAACATCTCACTACAAACCTTATTAACACAGAAGAATATGTCTGTCACGCGACCATTCACC TTACAAGATACAGGTC GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAACGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCCACCCCAACTGANAAACCT ] [+] EMBL CD178221 [ AACGAAGTTAAAG AAAAAACACAAAATCCTGTTTGGAACTCTGTGCATCATTTT CTTGTTAGTGATCCAAACGTTGATATACTTCAGCTTATTATACGTGACAGCCGAACGG AGACAAAACTAGGATCCTGTAACATCTCACTACAAACCTTATTAACACAGAAGAATATGTCTGTCACGCGACCATTCACC TTACAAGATACAGGTC AGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAGAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATT GGGTCGTATTCGTCTAAC TATTCAGTTTCATACTCTATCGAACTAT TTAGAAGTAACAGTACATGAATGTCAACATTT AAGCGGTGTTGATAAAGACGGTCTATCTGATCCATAT ] [+] EMBL AI975146 [ CTGTTTGGAACTCTGTGCATCATTTT CTTGTTAGTGATCCAAACGTTGATATACTTCAGCTTATTATACGTGACAGCCGAACGG AGACAAAACTAGGATCCTGTAACATCTCACTACAAACCTTATTAACACAGAAGAATATGTCTGTCACGCGACCATTCACC TTACAAGATACAGGTC GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAACGCCAAAATGCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAGAACCTTCTGAATCCCCTACAGCGAATCCAGAAATGGTTG ] [+] EMBL BF936553 [ TTATTATACGTGACAGCCGAACGG AGACAAAACTAGGATCCTGTAACATCTCACTACAAACCTTATTAACACAGAAGAATATGTCTGTCACGCGACCATTCACC TTACAAGATACAGGTC GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAACGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATTTGGGGTCGTATTCGTCTAACTTATTCAGTTTCATACTCTATCGAACTAT TTAGAAGTAACAGTACATGAATGTCAACATTTAAAGCGGTGTTGATAAAGACGGTCTATCTGATCCATATGTAAAACTTTATCTTATGGATTTACACGAAAACATGGTCAGTGATTCAAAAAAGACTAAAACTGTTAAAGATAACTTGGACCCAAAGTACGAAGAAAGTTTTTCAGTTTTCCGATTGGAGGCTGACCACCTTCCATTGACCATTC] [+] EMBL CD166676 [ caCGACCATTCA C TTACAAGATACAGGTC GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATT GGGTCGTATTCGTCTAAC TATTCAGTTTCATACTCTATCGAACTAT TTAGAAG ] [-] EMBL CD064252 [ GACCATTCACC TTACAAGATACAGGTC GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATT GGGTCGTATTCGTCTAAC TATTCAGTTTCATACTCTATCGAACTATGTTAGAAGT ] [+] EMBL CD064128 [ CATTCACC TTACAAGATACAGGTC GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGGTGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATT GGGTCGTATTCGTCTAAC TATTCAGTTTCATACTCTATCGAACTAT TTAGAAGTAACAGTA ] [-] EMBL CD166621 [ TACAGGTC GGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCAATATAAAACG CAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATT GGGTCGTATTCGTCTAAC TATTCAG ] [-] EMBL CD062672 [ TACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAACGCCAAAATCCAAGTGGGGATGATAATACCAATATTAAACGCCAGTTTATCCGTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAA AAATCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATT GGGTCGTATTCGTCTAAC TATTCAGTTTCATACTCTATCGAACTAT TTAGAAGTAACAGTACATGAATGTCAACATTT AAGCGGTGTTGATAAAGACGGTCTATCTGATCCATATGTAAAACTTTATCTTATGGATTTACACGAAAACATGGTCAGTGATTCAAAAAAGACTAAAACTGTTAAAGATAACTTGGACCCAAAGTACGAAGAAAG TTGTCAGATTCACGAagggtgc ] consensusID : consensus_10771#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 872 fasta sequence [ATTCGCCGACGAGCATTCTCATTGGGTCGTATTCGTCTAACTATTCAGTTTCATACTCTATCGAACTATTTAGAAGTAACAGTACATGAATGTCAACATTTAAGCGGTGTTGATAAAGACGGTCTATCTGATCCATATGTAAAACTTTATCTTATGGATTTACACGAAAACATGGTCAGTGATTCAAAAAAGACTAAAACTGTTAAAGATAACTTGGATCCAAAGTACGAAGAAAGTTTTCAGTTTCCGATTGAGGCTGACCACCTTCCATTGACCATTCTAAGGCTGGATATCAAAAATCATGTGGGACGTTTTACACGTAGTGGAAAAACGCATTTCATAGGGACTCTGTCGATAAATCTTATTGATTCAGTAGACGGGAAAGCTGAAACTAAGTGGTACGACTTGGCGTCGCCCATTTTTCGTCCATAACTTCGTGTTGTTTTGTTCGAAATACACGCAGCTATTGTCTCTATGTTATTTGGTATCAATTAGTTACTTTCTTAAACTGTCATCTCTATTTCCATGCAATTAGTGTGGTTTATTTGGATTTTTGCTTTTCTGTGTATTTCCCTTTATTAAGAATCATGTATATTTATATTTGCTATAATATCATATTTTTATTAAAAAATAGTTATTAATGCACTCTATTTACAACTCTGAAAGTGTATGAAATTTTATTACATGACCTACGACTCAACGTTCACTTATGCTTATTTGTTTTATGCCGCCATGTGTGTCACACTGTAATTTTCCCTTGGATTCTTTACTTTTTGAGTTGCATTATTTTTTT-ACATCCATGATGATCTAACCGCCATTATTACCGCATCGAAAATTTACCTAACTTGAAAGTTG-TGGCCATTAAGCTAATA] [+] EMBL CD081657 [ATTCGCCGACGAGCATTCTCATTGGGTCGTATTCGTCTAACTATTCAGTTTCATACTCTATCGAACTATTTAGAAGTAACAGTACATGAATGTCAACATTTAAGCGGTGTTGATAAAGACGGTCTATCTGATCCATATGTAAAACTTTATCTTATGGATTTACACGAAAACATGGTCAGTGATTCAAAAAAGACTAAAACTGTTAAAGATAACTTGGATCCAAAGTACGAAGAAAGTTTTCAGTTTCCGATTGAGGCTGACCACCTTCCATTGACCATTCTAAGGCTGGATATCAAAAATCATGTGGGACGTTTTACACGTAGTGGAAAAACGCATTTCATAGGGACTCTGTCGATAAATCTTATTGATTCAGTAGACGGGAAAGCTGAAACTAAGTGGTACGACTTGGCGTCGCCCATTTTTCGTCCATAACTTCGTGTTGTTTTGTTCGAAATACACGCAGCTATTGTCTCTATGTTATTTGGTATCAATTAGTTACTTTCTTAAACTGTCATCTCTATTTCCATGCAATTAGTGTGGTTTATTTGGATTTTTGCTTTTCTGTGTATTTCCCTTTATTAAGAATCATGTATATTTATATTTGCTATAATATCATATTTTTATTAAAAAATAGTTATTAATGCACTTTATTTACAACTCTGAAAGTGTATGAAATTTTATTACATGACCTACGACTCAACGTTCACTTATGCTTATTTGTTTTATGCCGCCATGTGTGTCACACTGGTATTNTCCCTTGGATTCTTTACTTTNTGAGTTGCATTATTTTTTT ACATCCATGATGATCTAACCGCCATTATTACCGCATCGAAAATTTACCTAACTTGAAAGTTG TGGCCATTAAGCTAt ] [+] EMBL CD083092 [ CTATTTAGAAGTAACAGTACATGAATGTCAACATTTAAGCGGTGTTGATAAAGACGGTCTATCTGATCCATATGTAAAACTTTATCTTATGGATTTACACGAAAACATGGTCAGTGATTCAAAAAAGACTAAAACTGTTAAAGATAACTTGGATCCAAAGTACGAAGAAAGTTTTCAGTTTCCGATTGAGGCTGACCACCTTCCATTGACCATTCTAAGGCTGGATATCAAAAATCATGTGGTATGTTTTACACGTAGTGGAAAAACGCATTTCATAGGGACTCTGTCGATAAATCTTATTGATTCAGTAGACGGGAAAGCTGAAACTAAGTGGTACGACTTGGCGTCGCCCATTTTTCGTCCATAACTTCGTGTTGTTTTGTTCGAAATACACGCAGCTATTGTCTCTATGTTATTTGGTATCAATTAGTTACTTTCTTAAACTGTCATCTCTATTTCCATGCAATTAGTGTGGTTTATTTGGATTTTTGCTTTTCTGTGTATTTCCCTTTATTAAGAATCATGTATATTTATATTTGCTATAATATCATATTTTTATTAAAAAATAGTTATTAATG ] [-] EMBL CD076666 [ CGTTTTACACGTAGTGGAAAAACGCATTTCATAGGGACTCTGTCGATAAATCTTATTGATTCAGTAGACGGGAAAGCTGAAACTAAGTGGTACGACTTGGCGTCGCCCATTTTTCGTCCATAACTTCGTGTTGTTTTGTTCGAAATACACGCAGCTATTGTCTCTATGTTATTTGGTATCAATTAGTTACTTTCTTAAACTGTCATCTCTATTTCCATGCAATTAGTGTGGTTTATTTGGATTTTTGCTTTTCTGTGTATTTCCCTTTATTAAGAATCATGTATATTTATATTTGCTATAATATCATATTTTTATTAAAAAATAGTTATTAATGCACTCTATTTACAACTCTGAAAGTGTATGAAATTTTATTACATGACCTACGACTCAACGTTCACTTATGCTTATTTGTTTTATGCCGCCATGTGTGTCACACTGTAATTTTCCCTTGGATTCTTTACTTTTTGAGTTGCATTATTTTTTTCACATCCATGATGATCTAACCGCCATTATTACCGCATCGAAAATTTACCTAACTTGAAAGTTGTTGGCCATTAAGCTAATA] [-] EMBL CD079855 [ CCCTTTATTAAGAATCATGTATATTTATATTTGCTATAATATCATATTTTTATTAAAAAATAGTTATTAATGCACTCTATTTACAACTCTGAAAGTGTATGAAATTTTATTACATGACCTACGACTCAACGTTCACTTATGCTTATTTGTTTTATGCCGCCATGTGTGTCACACTGTAATTTTCCCTTGGATTCTTTACTTTTTGAGTTGCATTATTTTTTTCACATCCATGATGATCTAACCGCCATTATTACCGCATCGAAAATTTACCTAACTTGAAAGTTGTTGGCCATTAAGCTAATA] consensusID : consensus_10771#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 627 fasta sequence [ACATTTGAAGTATACGATAAAGATCAAGGGAACAAAGATGATTATNTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGTGAAGGTGAAATAGATACGTGGTCCTCATTAGAAGGGGTAAAAACTGGTTCATTACACATTCAATTAACGTGGTTTCGATTGTCAAATCATGAAGTGGATTTTGTACAGGTTAGAAAGATATATTCATCATTTGCATAATTTCTTCTGTTAAGTATTGTTCGGTATATAATAACCAGGATTGTATTAGTTGTCCTTTGGTGCTTTTGCTCAAATGATCAAATAAAGGTTGATGATTGATAGGATTTTACTTCAAACACTTCAATTCCTTGTCTTAAATAACATTCAAGTATTGAATAGAAAGTGGGGTTGTATCATTTAGCAAAGTAATCAAAAATTATCAAGTCTTAATCAGCCACTGAAAAACAGAAAGCATTTTTCTTCGTATTTGAGTTGGAATTACTTTGAATACTATTCAAGTCGAAACTCATCTAAAGGTGTTCATCAATTTCCTGTGACATTTCATCAGTGTTCTTTGCAGAACATCTCTATGACTATAAATTAACATACATTCAAGTATTTCTCATGATTTCAGTCAGTATTACA] [-] EMBL CD189837 [ACATTTGAAGTATACGATAAAGATCAAGGGAACAAAGATGATTATNTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGTGAAGGTGAAATAGATACGTGGTCCTCATTAGAAGGGGTAAAAACTGGTTCATTACACATTCAATTAACGTGGTTTCGATTGTCAAATCATGAAGTGGATTTTGTACAGGTTAGAAAGATATATTCATCATTTGCATAATTTCTTCTGTTAAGTATTGTTCGGTATATAATAACCAGGATTGTATTAGTTGTCCTTTGGTGCTTTTGCTCAAATGATCAAATAAAGGTTGATGATTGATAGGATTTTACTTCAAACACTTCAATTCCTTGTCTTAAATAACATTCAAGTATTGAATAGAAAGTGGGGTTGTATCATTTAGCAAAGTAATCAAAAATTATCAAGTCTTAATCAGCCACTGAAAAACAGAAAGCATTTTTCTTCGTATTTGAGTTGGAATTACTTTGAATACTATTCAAGTCGAAACTCATCTAAAGGTGTTCATCAATTTCCTGTGACATTTCATCAGTGTTCTTTGCAGAACATCTCTATGACTATAAATTAACATACATTCAAGTATTTCTCATGATTTCAGTCAGTATTACA] consensusID : consensus_10771#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 372 fasta sequence [ATACAGGTCGGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCACATATAAAACGCAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATTGGGTCGTATTCGTCTAACTATTCAGTTTCATACTCTATCGAACTATTTAGAAG] [+] EMBL CD064334 [ATACAGGTCGGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGGGGATGATAATACCACATATAAAACGCAGTTTATCCCTGAATAAGAAATCTACCGATAATTCTACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATAATCTTTATCAACAACAAACTTCAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAATAAGCAATTCATCATTGGGTCGTATTCGTCTAACTATTCAGTTTCATACTCTATCGAACTATTTAGAAG] consensusID : consensus_10771#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 337 fasta sequence [GGTTACCGTGTGCTTTTTGGATAGTCCATATATCAATTTCTCTTTAACCGATATGGGAAATATCCTGGGGCTCCCGGGTTTGCAACAAACATTGAATACAGTACTTCGTAATGTTGTCAATCAGTTGGTCGTTCTCCCAAATCGTCTACCGGTTCAACTGGTTCCTGACATTGACATACAGCGTTTGAAATATCCATTGCCTCAAGGCGTTCTTCATATCAATATCATATCTGGTCGAAATCTTAAAGCAGGTGATAAAAATGTGATTGGACATAATACATCTGATCCATATTGTGTTATACGAGTTGGTGCTAGGACGTTCACTACTTCTGTTGTT] [+] EMBL CD059486 [GGTTACCGTGTGCTTTTTGGATAGTCCATATATCAATTTCTCTTTAACCGATATGGGAAATATCCTGGGGCTCCCGGGTTTGCAACAAACATTGAATACAGTACTTCGTAATGTTGTCAATCAGTTGGTCGTTCTCCCAAATCGTCTACCGGTTCAACTGGTTCCTGACATTGACATACAGCGTTTGAAATATCCATTGCCTCAAGGCGTTCTTCATATCAATATCATATCTGGTCGAAATCTTAAAGCAGGTGATAAAAATGTGATTGGACATAATACATCTGATCCATATTGTGTTATACGAGTTGGTGCTAGGACGTTCACTACTTCTGTTGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10771#0 ------------------------------------------------------------ consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ATTCGCCGACGAGCATTCTCATTGGGTCGTATTCGTCTAACTATTCAGTTTCATACTCTA 60 consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 --------------------------------------------------TTCGCTGGTG 10 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ----------------------------------------------------ATACAGGT 8 consensus_10771#1 TCGAACTATTTAGAAGTAACAGTACATGAATGTCAACATTTAAGCGGTGTTGATAAAGAC 120 consensus_10771#2 ---------------------ACATTTGAAGTATACGATAAAGATCAAGGGAACAAAGAT 39 consensus_10771#0 CGGTTACCGTGTGCTTTTTGGATAGTCCAGTCAGTATTTATT-GTATATC---AATTTCT 66 consensus_10771#4 -GGTTACCGTGTGCTTTTTGGATAGTCCA---------------TATATC---AATTTCT 41 consensus_10771#3 CGGGAATCATCAACCATTTACATGCATTTACAATTGTTGGCT-TTACTTCCTGGACAGCG 67 consensus_10771#1 GGTCTATC-TGATCCATATGTAAAACTTTAT--CTTATGGAT-TTACACGAAAACATGGT 176 consensus_10771#2 GATTATNTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGTGAAGGTGAAATAGAT 99 * * * consensus_10771#0 CTTTAACCGATATGGGAAATATCCTGGGGCTCCCGGGTT-TGCAACAAACATTGAATACA 125 consensus_10771#4 CTTTAACCGATATGGGAAATATCCTGGGGCTCCCGGGTT-TGCAACAAACATTGAATACA 100 consensus_10771#3 CCAAAATCCAAGTGGGGATGATAATACCACATATAAAAC-GCAGTTTATCCCTGAATAAG 126 consensus_10771#1 CAGTGATTCAAAAAAGACTAAAACTGTTAAAGATAACTT-GGATCCAAAGTACGAAGAAA 235 consensus_10771#2 ACGTGGTCCTCATTAGAAGGG----GTAAAAACTGGTTCATTACACATTCAATTAACGTG 155 * ** consensus_10771#0 GTACT--TCGTAATGTTGTCAATC-AGTTGGTCGTTCTCC--CAAATCGTCTACCGGTTC 180 consensus_10771#4 GTACT--TCGTAATGTTGTCAATC-AGTTGGTCGTTCTCC--CAAATCGTCTACCGGTTC 155 consensus_10771#3 AAATC--TACCGATAATTCTACCCCAACTGAAAAACCTTC--GGAATCCCCTACAG--CG 180 consensus_10771#1 GTTTT--CAGT----TTCCGATTGAGGCTGACCACCTTCCATTGACCATTCTAAGGCTGG 289 consensus_10771#2 GTTTCGATTGTCAAATCATGAAGTGGATTTTGTACAGGTT--AGAAAGATATATTCATCA 213 * * * ** consensus_10771#0 AACTGGTTCCTGACATTGACATACAGCGTTTGAAATATCCATTGCCTCAAGGCGTTCTTC 240 consensus_10771#4 AACTGGTTCCTGACATTGACATACAGCGTTTGAAATATCCATTGCCTCAAGGCGTTCTTC 215 consensus_10771#3 AATCCAGAAATGGTTGTAAGAAATCGTTTTCCTGATGATAATAATCTTTATCAACAACAA 240 consensus_10771#1 ATATCAAAAATCAT-GTGGGACGTTTTACACGTAGTGGAAAAACGCATTTCATAGGGACT 348 consensus_10771#2 TTTGCATAATTTCTTCTGTTAAGTATTGTTCGGTATA-TAATAACCAGGAT-TGTATTAG 271 * * * * * * consensus_10771#0 ATATCAATAT-CATATCTGGTCGAAATCTTAAAGCAGGTGATAAAAA----TGTGATTGG 295 consensus_10771#4 ATATCAATAT-CATATCTGGTCGAAATCTTAAAGCAGGTGATAAAAA----TGTGATTGG 270 consensus_10771#3 ACTTCAATAA-TCAGTCTGCTCAGGCAGTTAGA-CAAGTGATGACAA-----GTAATAGT 293 consensus_10771#1 CTGTCGATAAATCTTATTGATTCAGTAGACGGGAAAGCTGAAACTAAGTGGTACGACTTG 408 consensus_10771#2 TTGTCCTTTGGTGCTTTTGCTCAAATGATCAAATAAAG-GTTGATGATTGATAGGATTTT 330 ** * ** * * * * * consensus_10771#0 ACATAATACATCTG--ATCCAT-ATT---GTGTTATACGAGTTGGTGCTAGGACGTTCAC 349 consensus_10771#4 ACATAATACATCTG--ATCCAT-ATT---GTGTTATACGAGTTGGTGCTAGGACGTTCAC 324 consensus_10771#3 ATACAACAAATAAGCAATTCATCATT---GGGTCGTATTCGTCTA-ACTATTCAGTTTCA 349 consensus_10771#1 GCGTCGCCCATTTTTCGTCCATAACTTC-GTGTTGTTTTGTTCGAAATACACGCAGCTAT 467 consensus_10771#2 ACTTCAAACACTTCAATTCCTTGTCTTAAATAACATTCAAGTATTGAATAGAAAGTGGGG 390 * * * * * * * consensus_10771#0 TACTTCTGTTGTTAAAGAAACACTAGAACCAGTTTGGAACCAACATTCTGAGTCAATCGT 409 consensus_10771#4 TACTTCTGTTGTT----------------------------------------------- 337 consensus_10771#3 TACT-CTATCGAACTATTTAGAAG------------------------------------ 372 consensus_10771#1 TGTCTCTATGTTATTTGGTATCAATTAGTTACTTTCTTAAACTGTCATCTCTATTTCCAT 527 consensus_10771#2 TTGTATCATTTAGCAAAGTAATCAAAAATTATCAAGTCTTAATCAGCCACTGAAAAACAG 450 * * consensus_10771#0 CGACATTTGTCATGGTCAGTCAGTAACATTTGAAGTATACGATAAAGACCAAGGGAACAA 469 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 GCAATTAGTGTGGTTTATTTGGATTTTTGCTTTTCTGTGTATTTCCCTTTATTAAGAATC 587 consensus_10771#2 AAAGCATTTTTCTTCGTATTTGAGTTGGAATTACTTTGAATACTATTCAAGTCGAAACTC 510 consensus_10771#0 AGATGATTATTTAGGTTGTACTTCGATACCAGTTGAGTCGGTAGTCAGTGAAGGTGAAAT 529 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ATGTATATTTATATTTGCTATAATATCATATTTTTATTAAAAAATAGTTATTAATGCACT 647 consensus_10771#2 ATCTAAAGGTGTTCAT-CAATTTCCTGTGACATTTCATCAGTGTTCTTTGCAGAACATCT 569 consensus_10771#0 AGATACGTGGTCCTCATTAGAAGGGGTAAAAACTGGTTCATTACACATTCAATTAACGTG 589 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 CTATTTACAACTCTGAAAGTGTATGAAATTTTATTACATGACCTACGACTCAACGTTCAC 707 consensus_10771#2 CTATGACTATAAATTAACATACATTCAAGTATTTCTCATGATTTCAGTCAGTATTACA-- 627 consensus_10771#0 GTTTCGATTGTCAAATCATGAAGTGGATTTTGCACAGTCAATGGAACAGGCTCTGCAGTA 649 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 TTATGCTTATTTGTTTTATGCCGCCATGTGTGTCACACTGTAATTTTCCCTTGGATTCTT 767 consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 TCGTAAAGCGTCCGGACGAAGTATGAGTTCAGGATTTTTATACGTTGTTATTGAACAAGC 709 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 TACTTTTTGAGTTGCATTATTTTTTTACATCCATGATGATCTAACCGCCATTATTACCGC 827 consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 GAATAATTTGCCACCCGTAAAACAACTACAGGAACCTTCACCATTTTGTAATATCCATCT 769 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ATCGAAAATTTACCTAACTTGAAAGTTGTGGCCATTAAGCTAATA--------------- 872 consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 AGGACGTGATTATCAAACAAACGAAGTTAAAGAAAAAACACAAAATCCTGTTTGGAACTC 829 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 TGTGCATCATTTTCTTGTTAGTGATCCAAACGTTGATATACTTCAGCTTATTATACGTGA 889 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 CAGCCGAACGGAGACAAAACTAGGATCCTGTAACATCTCACTACAAACCTTATTAACACA 949 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 GAAGAATATGTCTGTCACGCGACCATTCACCTTACAAGATACAGGTCGGGAATCATCAAC 1009 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 CATTTACATGCATTTACAATTGTTGGCTTTACTTCCTGGACAGCGCCAAAATCCAAGTGG 1069 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 GGATGATAATACCAATATAAAACGCAGTTTATCCCTGAATAAGAAATCTACCGATAATTC 1129 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 TACCCCAACTGAAAAACCTTCGGAATCCCCTACAGCGAATCCAGAAATGGTTGTAAGAAA 1189 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 TCGTTTTCCTGATGATAATGATATTATTTCTTCTACAGAATCTTTATCAACAACAAACTT 1249 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 CAATAATCAGTCTGCTCAGGCAGTTAGACAAGTGATGACAAGTAATAGTATACAACAAAT 1309 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 AAGCAATTCATCATTGGGTCGTATTCGTCTAACTATTCAGTTTCATACTCTATCGAACTA 1369 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 TTTAGAAGTAACAGTACATGAATGTCAACATTTAAGCGGTGTTGATAAAGACGGTCTATC 1429 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 TGATCCATATGTAAAACTTTATCTTATGGATTTACACGAAAACATGGTCAGTGATTCAAA 1489 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 AAAGACTAAAACTGTTAAAGATAACTTGGACCCAAAGTACGAAGAAAGTTTTTCAGTTTT 1549 consensus_10771#4 ------------------------------------------------------------ consensus_10771#3 ------------------------------------------------------------ consensus_10771#1 ------------------------------------------------------------ consensus_10771#2 ------------------------------------------------------------ consensus_10771#0 CCGATTGGAGGCTGACCACCTTCCATTGACCATTC 1584 consensus_10771#4 ----------------------------------- consensus_10771#3 ----------------------------------- consensus_10771#1 ----------------------------------- consensus_10771#2 ----------------------------------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||