Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 10786 cluster # 10786       Sequences # 22       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10786#0 length = 1326 sequences # 21  
consensus_10786#1 length = 241 sequences # 1  

consensusID : consensus_10786#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 21
consensus length = 1326
fasta sequence
                              [AATATAGAGGCAGTTTTATGCAACAATCTTGGTGGATTTGCAAACTTGGGCTGAGGAGCGTCAGAAGGATCTCCAAAAATAGGATGTTTTACAGATGTATCATTTATTGAGCCGATGATCATAGAAACAGAAGAGTCTTCATTTTTACATCCTCTTGGAGACTCGGCAGTTGTAGGAGTGGGTACATCGTCGTCGTCTTCGTCAACTTCAGACCTTGCAACATCATGAGTATTACCAAGTTCATTACTTTTCTGCTCAATTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTTCTCATGTTCGAAGTCGTCATCGGATTCAGCCTCTCCTTCACTTTTATTTTCACAACAAATAGGTCCAGAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCAAGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACAGCATCCATGAGTTTTATGAGATTCTCACTATTGTCCATCTGAACAGACTGATTTTCGAGAAAGCCTTTATGTAAAAGCTCCATGAAAACATCTAAACGATGCTTGGCTGCTGCGCTAAGAGCGGCTTTTCTTTCATTCATGTGATCGGGATGATAACGGAGACGAAGCCATTCCTCATTTTTATGTGCTTCAAAGAATTCCTCGGTATGACGCTTCATATATCCTTCCTTGTACTCTTTGTACTTACTGCATGCCT-CTTCTTCAGTTATCA-AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGACGACGTCCATCGTGATCACTACGTTCACGACGAAATTTGTCACGGCTACGACGGCGATC-GGATTCTTCATCAGAATCTGCCATGT-AGAACCTACGAGGGACAACCCTCTGGTTGTTTATCTGAATT]

[-] EMBL CD095635             [AATATAGAGGCAGTTTTATGCAACAATCTTGGTGGATTTGCAAACTTGGGCTGAGGAGCGTCAGAAGGATCTCCAAAAATAGGATGTTTTACAGATGTATCATTTATTGAGCCGATGATCATAGAAACAGAAGAGTCTTCATTTTTACATCCTCTTGGAGACTCGGCAGTTGTAGGAGTGGGTACATCGTCGTCGTCTTCGTCAACTTCAGACCTTGCAACATCATGAGTATTACCAAGTTCATTACTTTTCTGCTCAATTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCACTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD095660             [AATATAGAGGCAGTTTTATGCAACAATCTTGGTGGATTTGCAAACTTGGGCTGAGGAGCGTCAGAAGGATCTCCAAAAATAGGATGTTTTACAGATGTATCATTTATTGAGCCGATGATCATAGAAACAGAAGAGTCTTCATTTTTACATCCTCTTGGAGACTCGGCAGTTGTAGGAGTGGGTACATCGTCGTCGTCTTCGTCAACTTCAGACCTTGCAACATCATGAGTATTACCAAGTTCATTACTTTTCTGCTCAATTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCACTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD095682             [    TAGAGGCAGTTTTATGCAACAATCTTGGTGGATTTGCAAACTTGGGCTGAGGAGCGTCAGAAGGATCTCCAAAAATAGGATGTTTTACAGATGTATCATTTATTGAGCCGATGATCATAGAAACAGAAGAGTCTTCATTTTTACATCCTCTTGGAGACTCGGCAGTTGTAGGAGTGGGTACATCGTCGTCGTCTTCGTCAACTTCAGACCTTGCAACATCATGAGTATTACCAAGTTCATTACTTTTCTGCTCAATTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCACTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTCCTCCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD157202             [                                                                                                                                                                                                                                         ACCAAGTTCATTACTTTTCTGCTCAACTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTTCTCATGTTCGAAGTCGTCATCGGATTCAGCCTCTCCTTCGCTTTTATTTTCACAACAAATAGGTCCAGAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCAAGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD192635             [                                                                                                                                                                                                                                          CCAAGTTCATTACTTTTCTGCTCAATTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD192679             [                                                                                                                                                                                                                                          CCAAGTTCATTACTTTTCTGCTCAACTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD121417             [                                                                                                                                                                                                                                                                                  TGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTTCTCATGTTCGAAGTCGTCATCGGATTCAGCCTCTCCTTCACTTTTATTTTCACAACAAATAGGTCCAGAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCAAGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACAGCATCCATGAGTTTTATGAGATTCTCACTATTGTCCATCTGAACAGACTGATTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD121557             [                                                                                                                                                                                                                                                                                  TGGTGCTTTCATCAGCTTCGTCATCGCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGTAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTTCTCATGTTCGAAGTCGTCATCGGATTCAGCCTCTCCTTCACTTTTATTTTCACAACAAATAGGTCCAGAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCAAGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACAGCATCCATGAGTTTTATGAGATTCTCACTATTGTGCATCTGAACAGACTGATTTTCGAGAAAagct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD152269             [                                                                                                                                                                                                                                                                                                     GTCATCGCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTTCTCATGTTCGAAGTCGCCATCGGATTCAGCCTCTCCTTCACTTTTATTTTCACAACAAATAGGTCCAGAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCAAGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACAGCATCCATGAGTTTTATGAGATTCTCACTATTGTCCATCTGAACAGACTGATTTTCGAGAAAGCCTTTATGTAAAAGCTCCATGAAAACATCTAAACGATGCTTGGCTGCTGCGCTAAGAGCGGCTTTTCTTTCATTCATGTGATCGGGATGATAACGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD195493             [                                                                                                                                                                                                                                                                                                           GCTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCAGACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCTTGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTCCTCATGTTCGAAGTCGTCATCGGATTCAGCCTCTCCTTCACTTTTATTTTCACAACAAATAGGTCCAGAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCAAGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACAGCATCCATGAGTTTTATGAGATTCTCGCTATTGTCCATCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD096693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCATCTGAACAGACTGATTTTCGAGAAAGCCTTTATGTAAAAGCTCCATGAAAACATCTAAACGATGCTTGGCTGCTGCGCTAAGAGCGGCTTTTCTTTCATTCATGTGATCGGGATGATAACGGAGACGAAGCCATTCCTCATTTTTATGTGCTTCAAAGAATTCCTCGGTATGACGCTTCATATATCCTTCCTTGTACTCTTTGTACTTACTGCATGCCT CTTCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGANCAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGACGACGTCCATCGTGATCACTACGTTCACGACGAAAATTGTCACGGCTACCACGGCGAACGGGATTC TCATCAGAATCTGCCATGT AGAAACTACGAAGGACAACCCTCTGGNTGGTTACCT     ]
[-] EMBL CD153186             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTTTTCTTTCATTCATGTGATCGGGATGATAACGGAGACGAAGCCATTCCTCATTTTTATGTGCTTCAAAGAATTCCTCGGTATGACGCTTCATATATCCTTCCTTGTACTCTTTGTACTTACTGCATGCCT CTTCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTCTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGACGACGTCCATCGTGATCACTACGTTCACGACGAAATTTGTCACGGCTACGACGGCGATC GGATTCTTCATCAGAATCTGCCATGT Aagatct                                  ]
[-] EMBL CD064786             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AACGGAGACGAAGCCATTCCTCATTTTTATGTGCTTCAAAGAATTCCTCGGTATGACGCTTCATATATCCTTCCTTGTACTCTTTGTACTTACTGCATGCCT CTTCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGACGACGTCCATCGTGATCACTACGTTCACGACGAAATTTGTCACGGCTACGACGGCGATC GGATTCTTCATCAGAATCTGCCA                                             ]
[-] EMBL CD122988             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGAAGCCATTCCTCATTTTTATGTGCTTCAAAGAATTCCTCGGTATGACGCTTCATATATCCTTCCTTGTACTCTTTGTACTTACTGCATGCCT CTTCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGACGACGTCCATCGTGATCACTACGTTCACGACGAAATTTGTCACGGCTACGACGGCGATC GGATTCTTCATCAGAATCTGCCATGTAAGATCTTACGAGGGACAACCCTCTGGTTGTTTATCTGA   ]
[+] EMBL CD064123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCTTGTACTCTTTGTACTTACTGCATGCCT CTTCTTCAGTTATCACAGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGAa                                                                                                                                                                    ]
[+] EMBL CD166864             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTCTTTGTACTTACTGCATG CT CTTCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCAC                                                                                                                                                                                  ]
[+] EMBL CD064374             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTAC TACTGCATGCCT CTTCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGAatg                                                                                                                                                                  ]
[-] EMBL CD064113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            aACTTCA CCCTACTTCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTCCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACC                                                                                                                                                                                 ]
[-] EMBL CD197972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCCT CTTCTTCAGTANTCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACTGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGACGACGTCCATCGTGATCACTACGTTCACGACGAAATTTGTCACGGCTACGACGGCGATC GGATTCTTCATCAGAATCTGCCATGTAAGATCTTACGAGGGACAACCCTCTGGTTGTTTATCTGAATT]
[-] EMBL CD161432             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccCTTCAGTTATCA AGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACAGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGCCCTTTCGCTGGTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGGCAAACGATGATCTTCACGAGTAGGTGCTGCACCAACt                                                                                                                                                                             ]
[-] EMBL CD130329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATAAGGAGGTTCTGCAGGTGATCGTCCACGGTCATTTCGACCTTCACCTGACAAACGATGATCTTCACGAGTTGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGACGACGTCCATCGTGATCACTACGTTC                                                                                                      ]


>consensus_10786#0 AATATAGAGGCAGTTTTATGCAACAATCTTGGTGGATTTGCAAACTTGGGCTGAGGAGCG TCAGAAGGATCTCCAAAAATAGGATGTTTTACAGATGTATCATTTATTGAGCCGATGATC ATAGAAACAGAAGAGTCTTCATTTTTACATCCTCTTGGAGACTCGGCAGTTGTAGGAGTG GGTACATCGTCGTCGTCTTCGTCAACTTCAGACCTTGCAACATCATGAGTATTACCAAGT TCATTACTTTTCTGCTCAATTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCG CTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCA GACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCT TGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTTCTCATGT TCGAAGTCGTCATCGGATTCAGCCTCTCCTTCACTTTTATTTTCACAACAAATAGGTCCA GAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCA AGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACAGCATCCATGAGT TTTATGAGATTCTCACTATTGTCCATCTGAACAGACTGATTTTCGAGAAAGCCTTTATGT AAAAGCTCCATGAAAACATCTAAACGATGCTTGGCTGCTGCGCTAAGAGCGGCTTTTCTT TCATTCATGTGATCGGGATGATAACGGAGACGAAGCCATTCCTCATTTTTATGTGCTTCA AAGAATTCCTCGGTATGACGCTTCATATATCCTTCCTTGTACTCTTTGTACTTACTGCAT GCCTCTTCTTCAGTTATCAAGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTACT GGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTGG TACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTCT GCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGTT GGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACGA CGACGTCCATCGTGATCACTACGTTCACGACGAAATTTGTCACGGCTACGACGGCGATCG GATTCTTCATCAGAATCTGCCATGTAGAACCTACGAGGGACAACCCTCTGGTTGTTTATC TGAATT



consensusID : consensus_10786#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 241
fasta sequence
                              [AGAGGGTTGTCCCTCGTAAGTTTACATCTGCATCTTATTTGGTGAGTTAACTTATCCATACGTTTGATTAATTTACTGAACATCGGACTGTACTTGTTGGTAGTTATGAGGGAATTAAGTTTTGAAAAGTTTTTATGAGTTCCTTTTATCTTTCAGATCTTACATGGCAGATTCTGATGAAGAATCCGATCGCCGTCGTAGCCGTGACAAATTTCGTCGTGAACGTAGTGATCACGATGGA]

[+] EMBL CD162798             [AGAGGGTTGTCCCTCGTAAGTTTACATCTGCATCTTATTTGGTGAGTTAACTTATCCATACGTTTGATTAATTTACTGAACATCGGACTGTACTTGTTGGTAGTTATGAGGGAATTAAGTTTTGAAAAGTTTTTATGAGTTCCTTTTATCTTTCAGATCTTACATGGCAGATTCTGATGAAGAATCCGATCGCCGTCGTAGCCGTGACAAATTTCGTCGTGAACGTAGTGATCACGATGGA]


>consensus_10786#1 AGAGGGTTGTCCCTCGTAAGTTTACATCTGCATCTTATTTGGTGAGTTAACTTATCCATA CGTTTGATTAATTTACTGAACATCGGACTGTACTTGTTGGTAGTTATGAGGGAATTAAGT TTTGAAAAGTTTTTATGAGTTCCTTTTATCTTTCAGATCTTACATGGCAGATTCTGATGA AGAATCCGATCGCCGTCGTAGCCGTGACAAATTTCGTCGTGAACGTAGTGATCACGATGG A



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10786#0      AATATAGAGGCAGTTTTATGCAACAATCTTGGTGGATTTGCAAACTTGGGCTGAGGAGCG 60
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      TCAGAAGGATCTCCAAAAATAGGATGTTTTACAGATGTATCATTTATTGAGCCGATGATC 120
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      ATAGAAACAGAAGAGTCTTCATTTTTACATCCTCTTGGAGACTCGGCAGTTGTAGGAGTG 180
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      GGTACATCGTCGTCGTCTTCGTCAACTTCAGACCTTGCAACATCATGAGTATTACCAAGT 240
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      TCATTACTTTTCTGCTCAATTTCAGTTTTAGATTTGGTGCTTTCATCAGCTTCGTCATCG 300
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      CTTGAAGAACCACTGTCACTATCGCTGCTCTGGCTACTTTGTGAAGGAGCTGAGCTACCA 360
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      GACTTGTTTGACTCGGTTCGTGTACGTCGGTTAGTTGTTCGACACTCTACAGTAGAACCT 420
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      TGAGTTTGAAGAGGTTCCGGCATTACTTTTCTAGTAAGTTCTGTGTCGAGCTTCTCATGT 480
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      TCGAAGTCGTCATCGGATTCAGCCTCTCCTTCACTTTTATTTTCACAACAAATAGGTCCA 540
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      GAAGACTGAGACTGATGTACTAATTCTTCGTCTGAATATCTATTACGATCAGATTCTTCA 600
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      AGTACTTTTAGGTCTTCATCAGAACCACCTTCAAGTTTGATAACAACAGCATCCATGAGT 660
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      TTTATGAGATTCTCACTATTGTCCATCTGAACAGACTGATTTTCGAGAAAGCCTTTATGT 720
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      AAAAGCTCCATGAAAACATCTAAACGATGCTTGGCTGCTGCGCTAAGAGCGGCTTTTCTT 780
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      TCATTCATGTGATCGGGATGATAACGGAGACGAAGCCATTCCTCATTTTTATGTGCTTCA 840
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      AAGAATTCCTCGGTATGACGCTTCATATATCCTTCCTTGTACTCTTTGTACTTACTGCAT 900
consensus_10786#1      ------------------------------AGAGGGTTGTCCCTCGTAAGTTTAC-ATCT 29
                                                           **** *    *    ****    *

consensus_10786#0      GCCTCTTCTTCAGTTA-TCAAGTCATCCAAAGGATCAAGAAACCGCTTAAACGGTATTAC 959
consensus_10786#1      GCATCTTATTTGGTGAGTTAACTTATCCATACGTTTGATTAATTTACTGAAC------AT 83
                       ** **** **  ** * * ** * ***** * * *  *  **     * ***      * 

consensus_10786#0      TGGAGGCCTGTACATACCATCGTATTCTGAGGCACTTGAACTTTTGGTGTCCTTTCGCTG 1019
consensus_10786#1      CGGA---CTGTACTTGTTGGTA-GTTATGAGGGAATTAAGTTTTGAAAAGTTTTT----- 134
                        ***   ****** *         ** ***** * ** *  ***        ***     

consensus_10786#0      GTACGAACTTGGTTTATAATCATCGCTGTTATCTTTACGAGGCCTTTTATAAGGAGGTTC 1079
consensus_10786#1      --ATGAGTTCCTTTTAT------CTTTCAGATCTT-ACATGGCAGATTCTGATGAAGAAT 185
                         * **  *   *****      *  *   ***** **  ***   ** * * ** *   

consensus_10786#0      TGCAGGTGATCGTCCACGGTCATTCCGACCTTCACCTGACAAACGATGATCTTCACGAGT 1139
consensus_10786#1      --CCGATCGCCGTC-GTAGCCGTGACAAATTTCGTCGTGAACGTAGTGATCACGATGGA- 241
                         * * *   ****    * * *  * *  ***  *    *     *****   * *   

consensus_10786#0      TGGTGCAGCACCTACAGTACCTGATCGGTCGTCGAATGGCTCTCGTTTGTCACCAGGACG 1199
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      ACGACGTCCATCGTGATCACTACGTTCACGACGAAATTTGTCACGGCTACGACGGCGATC 1259
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      GGATTCTTCATCAGAATCTGCCATGTAGAACCTACGAGGGACAACCCTCTGGTTGTTTAT 1319
consensus_10786#1      ------------------------------------------------------------
                                                                                   

consensus_10786#0      CTGAATT 1326
consensus_10786#1      -------
                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)