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Schistosoma mansoni
cluster # 10800 cluster # 10800       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10800#0 length = 1260 sequences # 6  
consensus_10800#1 length = 1247 sequences # 15  
consensus_10800#2 length = 571 sequences # 1  

consensusID : consensus_10800#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1260
fasta sequence
                              [GCGAATTGCGAAATTTCTGAGGTTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCCTCCGAATTTTCACAACTTCCTTGCGAACTATAAGAAATGTCATAAG-AAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGATGCGAGCCTGTGTCTATGAGTTTCGTTTGCTGCTAGAAATTCTGGACTGATATTTCGTGTGAGATCAGACTCTTGTAGGACAGGGATGGAATCAAGACAGAAAATGTATACTAACTGTCGAAGTAGTAAACTATTCAAAAGCGAAGAAGTGCTGGATCGAAGAGCATTATCAACCAAAATGGTTAGAAGTGACCGACGATTTTCTGCTGACCCTAGTTCTGGATTCCATCTGTATGACATGTGTGAAGAAGTATCAAGAATCCCGACGGCTCTTGGNTGAGATATAGAGGTATCAGATGGAANAAGAATGGGAGGTATGTATAACGAAGTGCTATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAACGCACTTGATGTGTACCTAAATGATGATGATAGTGATAATGATGATGTGATCGCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAGCGAAATGTAGTGGATAAATTATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGATACTAATAATTCAGTGAATTCCGTATCGGACAGAACAGAATGAATGATTTTTTGAGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGAGCCAACGATAAATACAATCATAACAAAATGTATGCATACAAGGTAAAACAACACAACGATTTGATTTTTCACATAAACAGATTACACAAACGTATTCTTCCATGCTTCCGCTGTAACATCTCCTCTTATATCTGGTCCTCCTGGCTTAGAGGTGGAAACAAGGGAACTCGACAATTTGACCAATATAGTCTTGCAACACATATGTACAGTCCCAATAACAAATGAACAGTCACTTGTTGATCTTTTGGTAACTCAACCAGCTCTTCATCCATCACTGGTACCCCGTGTGTACCTTCACCA]

[-] EMBL CD068373             [GCGAATTGCGAAATTTCTGAGGTTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCCTCCGAATTTTCACAACTTCCTTGCGAACTATAAGAAATGTCATAAG AAGCCATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD201375             [         GAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCCTCCGAATTTTCACGACTTCCTTGCGAACTATAAGAAATGTCATAAGCAAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGATGCGAGCCTGTGTCTATGAGTTTCGTTTGCTGCTAGAAATTCTGGACTGATATTTCGTGTGAGATCAGACTCTTGTAGGACAGGGATGGAATCAAGACAGAAAATGTATACTAACTGTCGAAGTAGTAAACTATTCAAAAGCGAAGAAGTGCTGGATCGAAGAGCATTATCAACCAAAATGGTTAGAAGTGACCGACGATTTTCTGCTGACCCTAGTTCTGGATTCCATCTGTATGACATGTGTGAAGAAGTATCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD095577             [                                                                                                                                                                                                                                                                                                                                                           AGTTTCGTTTGCTGCTAGAAATTCTGGACTGATATTTCGTGTGAGATCAGACTCTTGTAGGACAGGGATGGAATCAAGACAGAAAATGTATACTAACTGTCGAAGTAGTAAACTATTCAAAAGCGAAGAAGTGCTGGATCGAAGAGCATTATCAACCAAAATGGTTAGAAGTGACCGACGATTTTCTGCTGACCCCAGTTCTGGATTCCATCTGTATGACATGTGTGAAGAAGTATNCAGAATCCCGACGGCTCTTGGNTGAGATATAGAGGTATCAGATGGAANAAGAATGGGAGGTATGTATAACGAAGTGCTATCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL BG931523             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               atgggGGATCTTGGTTGAGATATAGAGGTATCAGATGGCAAAAGAATGGGAGGTATGTATAACGAAGTGCTATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAACGCACTTGATGTGTACCTAAATGATGATGATAGTGATAATGATGATGTGATCCCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAGCGAAACGTAGTGGATAAATTATTTACTCGATTACGTCGGTTATTATTTGCTAGATCAGATACTA                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD169048             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGTATAACGAAGTGCTATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAACGCACTTGATGTGTACCTAAATGATGATGATAGTGATAATGATGATGTGATCGCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAGCGAAATGTAGTGGATAAATTATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGATACTAATAATTCAGTGAATTCCGTATCGGACAGAACAGAATGAATGATTTTTTGAGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGAGCCAACGATAAATACAATCATAACAAAATGTATGCATACAAGGTAAAACAACACAACGATTTGATTTTTCACATAAACAGATTACACAAACGTATTCTTCCATGCTTCCGCTGTAACATCTCCTCTTATATCTGGTCCTCCTGGCTTAGAGGTGGAAACAAGGGAACTCGACAATTTGACCAATATAGTCTTGCAACACATATGTACAGTCCCAATAACAAATGAACAGTCACTTGTTGATCTTTTGGTAACTCAACCAGCTCTTCATCCATCACTGGTACCCCGTGTGTACCTTCACCA]
[+] EMBL CD169033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGTATAACGAAGTGCTATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAACGCACTTGATGTGTACCTAAATGATGATGATAGTGATAATGATGATGTGATCGCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAGCGAAATGTAGTGGATAAATTATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGATACTAATAATTCAGTGAATTCCGTATCGGACAGAACAGAATGAATGATTTTTTGAGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGAGCCAACGATAAATACAATCATAACAAAATGTATGCATACAAGGTAAAACAACACAACGATTTGATTTTTCACATAAACAGATTACACAATCGTATTCTTCCATGCTTCCGCTGTAACATCTCCTCTTATATCTGGTCCTCCTGGCTTAGAGGTGGAAACAAGGGAACTCGACAATTTGACCAATATAGTCTTGCAACACATATGTACAGTCCCAATAACAAATGAACAGTCACTTGTTGATCTTTTGGTAACTCA                                             ]


>consensus_10800#0 GCGAATTGCGAAATTTCTGAGGTTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGA TGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACT GTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCT AAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCC TCCGAATTTTCACAACTTCCTTGCGAACTATAAGAAATGTCATAAGAAGCCATGGAGCGA TAACACGTAATTCACGACGGACGAATGATGCGAGCCTGTGTCTATGAGTTTCGTTTGCTG CTAGAAATTCTGGACTGATATTTCGTGTGAGATCAGACTCTTGTAGGACAGGGATGGAAT CAAGACAGAAAATGTATACTAACTGTCGAAGTAGTAAACTATTCAAAAGCGAAGAAGTGC TGGATCGAAGAGCATTATCAACCAAAATGGTTAGAAGTGACCGACGATTTTCTGCTGACC CTAGTTCTGGATTCCATCTGTATGACATGTGTGAAGAAGTATCAAGAATCCCGACGGCTC TTGGNTGAGATATAGAGGTATCAGATGGAANAAGAATGGGAGGTATGTATAACGAAGTGC TATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAACGCACTTGATGTGTAC CTAAATGATGATGATAGTGATAATGATGATGTGATCGCGGAATAGTGGTGTCATCTGGCG ATGCATTTAAATATTCATCATCCAAGCGAAATGTAGTGGATAAATTATTTACTCGATTAC GTCGGTTATTATTTGGTAGATCAGATACTAATAATTCAGTGAATTCCGTATCGGACAGAA CAGAATGAATGATTTTTTGAGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGA GCCAACGATAAATACAATCATAACAAAATGTATGCATACAAGGTAAAACAACACAACGAT TTGATTTTTCACATAAACAGATTACACAAACGTATTCTTCCATGCTTCCGCTGTAACATC TCCTCTTATATCTGGTCCTCCTGGCTTAGAGGTGGAAACAAGGGAACTCGACAATTTGAC CAATATAGTCTTGCAACACATATGTACAGTCCCAATAACAAATGAACAGTCACTTGTTGA TCTTTTGGTAACTCAACCAGCTCTTCATCCATCACTGGTACCCCGTGTGTACCTTCACCA



consensusID : consensus_10800#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1247
fasta sequence
                              [CGACTGACCTCGGGCAGGTGAGATCAATAACGGCTAATGGAG-TTAGGGTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGCGTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGTGTAAGGCACGTCAGTCGGGTACGATCATTACATTGACTGAACTGACCACTAAGAGCTTCACTGAACCGTGCTTGATCTATCAGTTCACTTAAAACGCGTTGATATAAGAGACGGTTTGGGAAAATTTCTGAGGTACTTACTGATCCATCATGACTCAAATTAATAGTCCTCCCTGACGTTTGACCTCTTAATCTGGAGAAAGATATGATCGCTTCAAGAAGAGCATGACAAGAGCTTCCTAAACGAAGACAGTTAGGATGACAAGTTAGTGAAGGACCATGAAATACTAATGGACTAGGTAGGCTAGGCGGAGGATCTCCTGTACCAGGTAAAGGATCAGGATGAGAAGCGCCAGAGACAGCATGAACGAACAGTCTTTGGAGTAGCCAATTGATTAGAGGATGGATGATGAGTCCTTCAGGTTGGGCGAAACCCGGACGGAGTCGAGGCCAACAGGCGGAAGCAATATAAACAGCCAAACGAGGGTCATGAGAAAGTCCTTGAAACTGTCTATCCCTGTGTCTTTCAGTTGATGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCCTCCGAATTTTCACGACTTCCTTGCGAACTATAAGAAATGTCATAAGCAAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGAT]

[-] EMBL CD181803             [CGACTGACCTCGGGCAGGTGAGATCAATAACGGCTAATGGAG TTAGGGTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGCGTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD124755             [                 GTGAGATCAATAACGGCTAATGGAG TTAGGGTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGCGTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD181789             [                  TGAGATCAATAACGGCTAAT GAGTTTAGGGTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGCGTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCCAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD181855             [                  TGAGATCAATAACGGCTAATGGAG TTAGGGTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGCGTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD181848             [                  TGAGATCAATAACGGCTAATGGAG TTAGGGTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGCGTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD065572             [                                        AG TTAGGGTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGCGTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGTGTAAGGCACGTCAGTCGGGTACGATCATTACATTGACTGAACTGACCACTAAGAGCTTCACTGAACCGTGCTTGATCTATCAGTTCACTTAAAACGCGTTGATATAAGAGACGGTTTGGGAAAATTTCTGAGGTACTTACTGATCCATCATGACTCAAATTAATAGTCCTCCCTGACGTTTGACCTCTTAATCTGGAGAAAGATATGATCGCTTCAAGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD181889             [                                                                                                                           GCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAATAGCAGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD156110             [                                                                                                                                                                                                                                                             GTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGTGTAAGGCACGTCAGTCGGGTACGATCATTACATTGACTGAACTGACCACTAAGAGCTTCACTGAACCGTGCTTGATCTATCAGTTCACTTAAAACGCGTTGATATAAGAGACGGTTTGGGAAAATTTCTGAGGTACTTACTGATCCATCATGACTCAAATTAATAGTCCTCCCTGACGTTTGACCTCTTAATCTGGAGAAAGATATGATCGCTTCAAGAAGAGCATGACAAGAGCTTCCTAAACGAAGACAGTTAGGATGACAAGTTAGTGAAGGACCATGAAATACTAATGGACTAGGTAGGCTAGGCGGAGGATCTCCTGTACCAGGTAAAGGATCAGGATGAGAAGCGCCAGAGACAGCATGAACGAACAGTCTTTGGAGTAGCCAATTGATTAGAGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD156040             [                                                                                                                                                                                                                                                             GTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGTGTAAGGCACGTCAGTCGGGTACGATCATTACATTGACTGAACTGACCACTAAAAGCTTCACTGAACCGTGCTTGATCTATCAGTTCACTTAAAACGCGTTGATATAAGAGACGGTTTGGGAAGATTTCTGAGGTACTTACTGATCCATCATGACTCAAATTAATAGTCCTCCCTGACGTTTGACCTCTTAATCTGGAGAAAGATATGATCGCTTCAAGAAGAGCATGACAAGAGCTTCCTAAACGAAGACAGTTAGGATGACAAGTTAGTGAAGGACCATGAAATACTAATGGACTAGGTAGGCTAGGCGGAGGATCTCCTGTACCAGGTAAAGGATCAGGATGAGAAGCGCCAGAGACAGCATGAACGAACAGTCTTTGGAGTAGCCAATTGATTAGAGGATGGATGATGAGTCCTTCAGGTTGGGCGAAACCCGGACGGAGTCGAGGCCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CD168250             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCAGAGACAGCATGAACGAACAGTCTTTGGAGTAGCCAATTGATTAGAGGATGGATGATGAGTCCTTCAGGTTGGGCGAAACCCGGACGGAGTCGAGGCCAACAGGCGGAAGCAATATAAACAGCCAAACGAGGGTCATGAGAAAGTCCTTGAAACTGTCTATCCCTGTGTCTTTCAGTTGATGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATA                                                                                                    ]
[-] EMBL CD168141             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGAGACAGCATGAACGAACAGTCTTTGGAGTAGCCAATTGATTAGAGGATGGATGATGAGTCCTTCAGGTTGGGCGAAACCCGGACGGAGTCGAGGCCAACAGGCGGAAGCAATATAAACAGCCAAACGAGGGTCATGAGAAAGTCCTTGAAACTGTCTATCCCTGTGTCTTTCAGTTGATGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCG                                                                                                ]
[+] EMBL CD189243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGAAGCAATATAAACAGCCAAACGAGGGTCATGAGAAAGTCCTTGAAACTGTCTATCCCTGTGTCTTTCAGTTGATGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGG                                                                                                                                                                                                                     ]
[-] EMBL CD098434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTCCTGGAAACGGTCTATCCCGGTGTCTTACAGTGGAGGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCCTCCGAATTTTCACGACTTCCTTGCGAACTATAAGAAATGTCATAAGCAAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGAT]
[-] EMBL CD110928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTCCTTGAAACTGTCTATCCCTGTGTCTTTCAGTTGATGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCCTCCGAATATTCACGACTTCCTTGCGAACTATAAGAAATGTCATAAGCAAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGAT]
[-] EMBL CD110929             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTCCTTGAAACTGTCTATCCCTGTGTCTTTCAGTTGATGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCATTATAATACCCGATATCCTCCGAATTTTCACGACTTCCTTGCGAACTATAAGAAATGTCATAAGCAAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGAT]


>consensus_10800#1 CGACTGACCTCGGGCAGGTGAGATCAATAACGGCTAATGGAGTTAGGGTCATCGGCATAA GTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTTAAACCAGGCACGC GTGCAGTGAAAAGAAGTAAAAGACCGTCTAGACGTCTTAGTGCAAGTGGGTGGGACTGAA TAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACATTTCGGATAGATACTC TACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTTCTGAATTTTGTGGTG TAAGGCACGTCAGTCGGGTACGATCATTACATTGACTGAACTGACCACTAAGAGCTTCAC TGAACCGTGCTTGATCTATCAGTTCACTTAAAACGCGTTGATATAAGAGACGGTTTGGGA AAATTTCTGAGGTACTTACTGATCCATCATGACTCAAATTAATAGTCCTCCCTGACGTTT GACCTCTTAATCTGGAGAAAGATATGATCGCTTCAAGAAGAGCATGACAAGAGCTTCCTA AACGAAGACAGTTAGGATGACAAGTTAGTGAAGGACCATGAAATACTAATGGACTAGGTA GGCTAGGCGGAGGATCTCCTGTACCAGGTAAAGGATCAGGATGAGAAGCGCCAGAGACAG CATGAACGAACAGTCTTTGGAGTAGCCAATTGATTAGAGGATGGATGATGAGTCCTTCAG GTTGGGCGAAACCCGGACGGAGTCGAGGCCAACAGGCGGAAGCAATATAAACAGCCAAAC GAGGGTCATGAGAAAGTCCTTGAAACTGTCTATCCCTGTGTCTTTCAGTTGATGACGAGA TTAATCCGCCCAAAGCAACTCTGCGCCGATACAGACAAACCGAGGAATCGTATTCTTCCA TGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGAGGCTAGATGGTGAAGGTACACAC GGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTT CATTTGTTATTGGGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTT CCCTTGTTTCCACCTCTAAGCCAGGAGGACCAGATATAAGAGGAGATGTTACAGCGGCAT TATAATACCCGATATCCTCCGAATTTTCACGACTTCCTTGCGAACTATAAGAAATGTCAT AAGCAAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGAT



consensusID : consensus_10800#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 571
fasta sequence
                              [TGTATAACGAAGTGCTATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAACGCACTTGATGTGTACCTAAATGATGATGATAGTGATAATGATGATGTGATCGCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAGCGAAATGTAGTGGATAAATTATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGATACTAATAATTCAGTGAATTCCGTATCGGACAGAACAGAATGAATGATTTTTTGAGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGAGCCAACGATAAATACAATCATAACAAAATGTATGCATACAAGGTAAAACAACACAACGATTTGATTTTTCACATAAACAGATTACACAATCGTCATCACTTTCAAGACCAGTGGATCTAGCTGCTGTCAGAGCCGCCCGAACGTCTGGGCAATCAATAAGACTTTGAGAGCGCCTACTATTGTTTGCACGTGATGGATGGTTAGTAGATGGGATATTCGTAGAAGGTACGGAACGCGTGTTTGTTGCTGATAGGCG]

[-] EMBL CD169459             [TGTATAACGAAGTGCTATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAACGCACTTGATGTGTACCTAAATGATGATGATAGTGATAATGATGATGTGATCGCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAGCGAAATGTAGTGGATAAATTATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGATACTAATAATTCAGTGAATTCCGTATCGGACAGAACAGAATGAATGATTTTTTGAGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGAGCCAACGATAAATACAATCATAACAAAATGTATGCATACAAGGTAAAACAACACAACGATTTGATTTTTCACATAAACAGATTACACAATCGTCATCACTTTCAAGACCAGTGGATCTAGCTGCTGTCAGAGCCGCCCGAACGTCTGGGCAATCAATAAGACTTTGAGAGCGCCTACTATTGTTTGCACGTGATGGATGGTTAGTAGATGGGATATTCGTAGAAGGTACGGAACGCGTGTTTGTTGCTGATAGGCG]


>consensus_10800#2 TGTATAACGAAGTGCTATCTGATGATGAACGAGTCACTCCATCGAGATAATTGAGTAAAC GCACTTGATGTGTACCTAAATGATGATGATAGTGATAATGATGATGTGATCGCGGAATAG TGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAGCGAAATGTAGTGGATAAAT TATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGATACTAATAATTCAGTGAATT CCGTATCGGACAGAACAGAATGAATGATTTTTTGAGCCAAACGTTTACATAATGGACAAG AAGGATTGATACTGAGCCAACGATAAATACAATCATAACAAAATGTATGCATACAAGGTA AAACAACACAACGATTTGATTTTTCACATAAACAGATTACACAATCGTCATCACTTTCAA GACCAGTGGATCTAGCTGCTGTCAGAGCCGCCCGAACGTCTGGGCAATCAATAAGACTTT GAGAGCGCCTACTATTGTTTGCACGTGATGGATGGTTAGTAGATGGGATATTCGTAGAAG GTACGGAACGCGTGTTTGTTGCTGATAGGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10800#0      GCGAATTGCGAAATTTCTGAGGTTAGATGGTGAAGGTACACACGGGGTACCAGTGATGGA 60
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      -------------CGACTGACCTCGGGCAGGTGAGATCAATAACGGCTAATGGAGTTAGG 47
                                                                                   

consensus_10800#0      TGAA---GAGCTGGTTGAGTTACCAAAAGATCAACAAGTGACTGTTC--ATTTGTTATTG 115
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      GTCATCGGCATAAGTGGCATATGTAATAGTTCACTGATCAGGTGTTCTGGATCATTTCTT 107
                                                                                   

consensus_10800#0      GGACTGTACATATGTGTTGCAAGACTATATTGGTCAAATTGTCGAGTTCCCTTGTTTCCA 175
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      AAACCAGGCACGCGTGCAGTGAAAAGAAGTAAA--AGACCGTCTAGACGTCTTAGTGCAA 165
                                                                                   

consensus_10800#0      CCTC-TAAGCCAGGAGGACCAGATATAAG-----AGGAGATGTTACAGCGGCATTATAAT 229
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      GTGGGTGGGACTGAATAGCTGGTTGTAAGTAATCAGCAGGCTCTCTTACGCTAATAACAT 225
                                                                                   

consensus_10800#0      ACCCGATATCCTCCGAATTTTCA------CAACTTCCTTGCGAACTATAAGAAATGTCAT 283
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      TTCGGATAGATACTCTACTACTAGTGCGTTGATTTGGAACTGAACTTACAGAATTTTCTT 285
                                                                                   

consensus_10800#0      AAGAAGCCATGGAGCGATAACACGTAATTCACGACGGACGAATGATGCGAGCCTGTGTCT 343
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      CTGAATTTTGTGGTGTAAGGCACGTCAGTCGGGTACGATCATTACATTGA--CTGAACTG 343
                                                                                   

consensus_10800#0      ATGAGTTTCGTTTGCTGCTAGAAATTCTGGACTGATATTTCGTGTGAGATCAGACTCTTG 403
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      ACCACTAAGAGCTTCACTGAACCGTGCTTGATCTATCAGTTCACTTAAAACGCGTTGATA 403
                                                                                   

consensus_10800#0      TAGGACAGGGATGGAATCAAGACAGAAAATGTATACTAACTGTCGAAGTAGTAAACTATT 463
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      TAAGAGACGGTTTGGGAAAATTTCTGAGGTACTTACTGATCCATCATGACTCAAATTAAT 463
                                                                                   

consensus_10800#0      CAAAAGCGAAGAAGTGCTGGATCGAAGAGCATTATCAACCAAAATGGTT---AGAAGTGA 520
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      AGTCCTCCCTGACGTTTGACCTCTTAATCTGGAGAAAGATATGATCGCTTCAAGAAGAGC 523
                                                                                   

consensus_10800#0      CCGACGATTTTCTGCTGACCCTAGTTC-TGGATTCCATCTGTATGACATGTGTGAAGAAG 579
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      ATGACAAGAGCTTCCTAAACGAAGACAGTTAGGATGACAAGTTAGTGAAGGACCATGAAA 583
                                                                                   

consensus_10800#0      TATCAAGAATCCCGACGGCTCTTGGNTGAGATATAGAGGTATCAGATGGAANA--AGAAT 637
consensus_10800#2      ------------------------------------------------------------
consensus_10800#1      TACTAATGGACTAGGTAGG-CTAGGCGGAGGATCTCCTGTACCAGGTAAAGGATCAGGAT 642
                                                                                   

consensus_10800#0      GGGAGGTATGTATAACGAAGTG--CTATCTGATGATGAACGAGTCACTCCATCGA--GAT 693
consensus_10800#2      --------TGTATAACGAAGTG--CTATCTGATGATGAACGAGTCACTCCATCGA--GAT 48
consensus_10800#1      GAGAAGCGCCAGAGACAGCATGAACGAACAGTCTTTGGAGTAGCCAATTGATTAGAGGAT 702
                                     **    **  * * * *    ** *  ** ** *  **     ***

consensus_10800#0      AATTGAGTAAACGCACTTGATGTGT---ACCTAAATGATGATGATAGTGATAAT----GA 746
consensus_10800#2      AATTGAGTAAACGCACTTGATGTGT---ACCTAAATGATGATGATAGTGATAAT----GA 101
consensus_10800#1      GGATGATGAGTCCTTCAGGTTGGGCGAAACCCGGACGGAGTCGAGGCCAACAGGCGGAAG 762
                          ***  *  *   *  * ** *    ***   * *  *  **     * *        

consensus_10800#0      TGATGTGATCGCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAG 806
consensus_10800#2      TGATGTGATCGCGGAATAGTGGTGTCATCTGGCGATGCATTTAAATATTCATCATCCAAG 161
consensus_10800#1      CAATATAAACAGCCAAACGAGG-GTCAT--GAGAAAGTCCTTGAA-ACTGTCTATCCCTG 818
                         ** * * *    **  * ** *****  *   * *   ** ** * *    ****  *

consensus_10800#0      CGAAATGTAGTGGATAA-ATTATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGA 865
consensus_10800#2      CGAAATGTAGTGGATAA-ATTATTTACTCGATTACGTCGGTTATTATTTGGTAGATCAGA 220
consensus_10800#1      TGTCTTTCAGTTGATGACGAGATTAATCCGCCCAAAGCAACTCTGCGCCGATACAG-ACA 877
                        *   *  *** *** *    *** *  **   *   *   * *     * ** *  * *

consensus_10800#0      TACTAATAATTCAGTGAATTCCGTATC------GGACAGAACAGAATGAATGATTTTTTG 919
consensus_10800#2      TACTAATAATTCAGTGAATTCCGTATC------GGACAGAACAGAATGAATGATTTTTTG 274
consensus_10800#1      AACCGAGGAATCGTATTCTTCCATGCTTCCGGTGAACTGAGCGAATTGCGAAATTTCTGA 937
                        **  *  * **      **** *         * ** ** *  * **    **** *  

consensus_10800#0      AGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGAGCCAACGATAAATACAATC 979
consensus_10800#2      AGCCAAACGTTTACATAATGGACAAGAAGGATTGATACTGAGCCAACGATAAATACAATC 334
consensus_10800#1      GGCTAGATGGTGAA--GGTACACACGGGGTACCAGTGATGGATGAAGAGCTGGTTGAGTT 995
                        ** * * * * *     *  *** *  * *    *  **    **       *  * * 

consensus_10800#0      ATAACAAAATGTATGCATACAAGGTAAAACAACACAACGATTTGATTTTTCACATAAACA 1039
consensus_10800#2      ATAACAAAATGTATGCATACAAGGTAAAACAACACAACGATTTGATTTTTCACATAAACA 394
consensus_10800#1      ACCAAAAGATCAACAAGTGACTGTTCATTTGTTATTGGGACTGTACATAT-GTGTTGCAA 1054
                       *  * ** **  *    *    * * *      *    ** *  *  * *    *    *

consensus_10800#0      GATTACACAAACGTATTCTTCCATGCTTCCGCTGTAAC-ATCTCCTCTTATATCTGGTCC 1098
consensus_10800#2      GATTACACAATCGTCATCACTTTCAAGACCAGTGGATCTAGCTGCTGTCAGAGCCG---- 450
consensus_10800#1      GACTATATTGGTCAAATTGTCG--AGTTCCCTTGTTTCCACCTC----TAAGCCAGGAGG 1108
                       ** ** *         *           **  **   * * **      *   * *    

consensus_10800#0      TCCTGGCTTAGAGGTGGAAACAAGGG-AACTCGACAATTTGACCAATATAGTCTTGCAAC 1157
consensus_10800#2      CCCGAACGTCTGGGC--AATCAATAA-GACTTTGAGAGC-GCCTACTATTGT-TTGCA-C 504
consensus_10800#1      ACCAGATATAAGAGGAGATGTTACAGCGGCATTATAAT--ACCCGATATCCT-CCGAA-T 1164
                        **     *    *   *    *      *      *     *   ***  *   * *  

consensus_10800#0      ACATATGTACAGTCCCAATAACAAATGAACAGTCACTTGTTGATCTTTTGGTAACTCAAC 1217
consensus_10800#2      GTG-ATGGATGGT-----TAGTAGATGG---GATATTCGTAGAAGGTACGGAACGCGTGT 555
consensus_10800#1      TTTCACGACTTCCTTGCGAACTATAAGAAATGTCATAAGCAAGCCATGGAGCGATAACAC 1224
                           * *            *  * * *    *  *   *       *   *         

consensus_10800#0      -CAGCTCTTCATCCATCACTGGTACCCCGTGTGTACCTTCACCA 1260
consensus_10800#2      -TTGTTGCTGATAGGCG--------------------------- 571
consensus_10800#1      GTAATTCACGACGGACGAATGAT--------------------- 1247
                            *    *                                 




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)