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Schistosoma mansoni
cluster # 10807 cluster # 10807       Sequences # 22       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10807#0 length = 1297 sequences # 19  
consensus_10807#1 length = 266 sequences # 2  
consensus_10807#2 length = 207 sequences # 1  

consensusID : consensus_10807#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 19
consensus length = 1297
fasta sequence
                              [GCACTTTACTACCAGGTTCAATTATGTACAGAAAAATAGGGNTTTTATAGTAATTAAAAGACCTTGAGATTCCATAGTAACAGTATGTTAACAGCCAATCAGGACCTTGTTATTTTAGTAGCATAGCTTCTAACTAATCGCTGATTGGNTGGTCTCNTTATGAGCCTCTCTAGAGTTTATCGTAAGCCGACCTAACACCTCCCTTTTTTTTTGAAGATTCGAAGATTAGATTCTGATTTTAAAAAAATTATCTGTAGGTTGAAATTCTCCAACATTTCCTCCCCCACGAAATAATGTTGGATCTTCATATCTCCAATTTACAATTAATATGACTTTATTTAGAACACATTTCTCGTATTGAATGCAGAATCCACTAGAAATGAATAGATAATGATGAACGATATTTGATTTTAGGTCATCGGAATTTGGCTTTTCTGAAACATCTCCATCAAATCCATTAAGATTTTCACTGGAGGATATTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGGCCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTGGTGCTTCATTAGACTCTGGGCTCAGGGCTTTGTCTACGGAACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCATTTA-GCAAGATATTGTCTTGCTCTGAACCGGCCAACTTACCCATTTTGCATTTTCCATCAGATATAAAGGGAAATGAACCCTCAACTTGGCGTTCTTCTGGGACGGCCATTTTAGCACCATTATTGAAAAACTTGTCCAAGACTGTTTCAATTAGTTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTTCTCTGCTG------ATAATAATAATAACTCCGAAAATTCACCGGCAATTATTACAGCTTGTTTGATTACCAAATCACGTCTCGGTTGCTGTATTTC-TTTTTGCCAGAATCCTCGACGACAATTGTTGT-A-TTTTTTTGTGTA-CC--AAAAACCCCGACAACAA----TT-TTTTTTTTTTTGCCGAAATCCCCGTCGCC-ACTGTTATGACGTGTAAGTTGACCGCTTTTTTCGTATCCTAACTATTCGGATAACCCCAGGCTAGCACTACTCAGCGACTTGAAAGACCAGAGAGAAGACACGAGTATCAG]

[+] EMBL AA999297             [GCACTTTACTACCAGGTTCAATTATGTACAGAAAAATAGGGNTTTTATAGTAATTAAAAGACCTTGAGATTCCATAGTAACAGTATGTTAACAGCCAATCAGGACCTTGTTATTTTAGTAGCATAGCTTCTAACTAATCGCTGATTGGNTGGTCTCNTTATGAGCCTCTCTAGAGTTTATCGTAAGCCGACCTAACACCTCCCTTTTTTTTTGAAGATTCGAAGATTAGATTCTGATTTTAAAAAAATTATCTGTAGGTTGAAATTCTCCAACATTTCCTCCCCCAAGAAATTATtgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL SM671                [                                                                                                                                                                                                                         TTCGAAGATTAGATTCTGATTTTAAAAAAATTATCTGTAGGTTGAAATTCTCCAACATTTCCTCCGGGACG AATAATGTTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD131624             [                                                                                                                                                                                                                             AAGATTAGATTCTGATTTTAAAAAAATTATCTGTAGGTTGAAATTCTCCAACATTTCCTCCCCCACGAAATAATGTTGGATCTTCATATCTCCAATTTACAATTAATATGACTTTATTTAGAACACATTTCTCGTATTGAATGCAGAATCCACTAGAAATGAATAGATAATGATGAACGATATTTGATTTTAGGTCATCGGAATTTGGCTTTTCTGAAACATCTCCATCAAATCCATTAAGATTTTCACTGGAGGATATTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGCTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCGTAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGACCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTGGTGCTTCATTAGACTCTGGGCTCAGGGCTTTGTCTACGGAACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCATTTA GCAAGATATTGTCTTGCTCTGAACCGGCCAACTTACCCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD131648             [                                                                                                                                                                                                                             AAGATTAGATTCTGATTTTAAAAAAATTATCTGTAGGTTGAAATTCTCCAACATTTCCTCCCCCACGAAATAATGTTGGATCTTCATATCTCCAATTTACAATTAATATGACTTTATTTAGAACACATTTCTCGTATTGAATGCAGAATCCACTAGAAATGAATAGATAATGATGAACGATATTTGATTTTAGGTCATCGGAATTTGGCTTTTCTGAAACATCTCCATCAAATCCATTAAGATTTTCACTGGAGGATATTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGCTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCGTAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGACCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTGGTGCTTCATTAGACTCTGGGCTCAGGGCTTTGTCTACGGAACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD147831             [                                                                                                                                                                                                                                                                                        ctctCACGTAATAATGTTGGATCTTCATATCTCCAATTTACAATTAATATGACTTTATTTAGAACACATTTCTCGTATTGAATGCAGAATCCACTAGAAATGAATAGATGATGATGAACGATATTTGATTTTAGGTCATCGGAATTTGGCTTTTCTGAAACATCTCCATCAAATTCATTAAGATTTTCACTGGAGGATATTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGGCCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTGGTGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD183114             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAACATCTCCATCAAATCCATTAAGATTTTCACTGGAGGATATTTGATAGCTAGGGGAATCATTATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACCTAGTTTCCTCATCTTCATAAGAAATTTCATCAAAATCATGTGCGCCATTCCAGCTTTCTTGGCCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCTTCAGAAATCGGCGTATTGAGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BG930504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCTTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGGCCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTGGTGCTTCATTAGACTCTGGGCTCAGGGCTTTGTCTACGGAACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCATTTA GCAAGATATTGTCTTGCTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BG931261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gTCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGGCCGATATCATGTAACCCATAGTTTAATTCTGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTGGTGCTTCATTAGACTCTGGGCTCAGGGCCTTGTCTACGGAACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCATTTA GCAAGATATTGTCTTGCTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD130938             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGGGCTCAGGGCTTTGTCTACGGAACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCATTTA GCAAGATATTGTCTTGCTCTGAACCGGCCAACTTACCCATTTTGCCTTTTCCATCAGATGTGAAGGGAAATGAACCCTCAACTGGGCGTTCTTCTGGGACGGCCATTTTAGCACCATTATTGAAAAACTTGTCCAAGACTGTTTCAAATAGTTGTTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTTCTCTGCTG      ATAATAATAATAACTCCGAGAATTCACCGGCAATTATTACAGCTTGCTTGATTACCAAATCACGTCTCGGTTGCTGTATTTC TTTTTGCCAGAAT                                                                                                                                                                                                            ]
[-] EMBL CD184002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          tgCGGAACCTTCTTTTTCTTGCTCATCTGATACTGTCACAGTTTCATGTGCATTAG GCAAGATATTGTCTTGCTCTGAACCGGCAAACTTACCAATTTTGCATTTTCCATCAGATATAAAGGGAATTGAACCCTCAACTTGGCGTTCTTCTGGGACGGCCATTTTAGCACCATTATTGAAAAACTTGTCCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD184078             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          tgCGGAACCTTCTTTTTCTTGCTCATCTGATACTGTCACAGTTTCATGTGCATTAG GCAAGATATTGTCTTGCTCTGAACCGGCAAACTTACCAATTTTGCATTTTCCATCAGATATAAAGGGAATTGAACCCTCAACTTGGCGTTCTTCTGGGACGGCCATTTTAGCACCATTATTGAAAAACTTGTCCAAGA                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD119481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTTTTTCTTTGACATCTGATACTGCCACAGTTTCATGTGCATTTA GCAAGATATTGTCTTGCTCTGAACCGGCCAACTTACCCATTTTGCCTTTTCCATCAGATGTGAAGGGAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD147460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTAGGCAAGATATTGTCTTGCTCTGAACCGGCCAACTTACCAATTTTGCATTTTCCATCAGATATAAAGGGAATTGGACCCTCAACTTGGCGTTCTTTTGGGACGGCCATTTTAGCACCATTATTGAAAAACTTGTCCAAGACTGTTTCAAATAGTTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTTTTCTGCTG      ATAATAATAATAACTCCGAAAATTCACCGGCAATTATTACAGCTTGTTTGATTACCCAATCACGTCTCGGTTGCTGTAATTC TTTTTGCCAGAATCCTCGACGACAATTGTTGT A ATTTTTTGTGTACCC  AAAAACCCCGACAACAA    TT TTTTT                                                                                                                                        ]
[+] EMBL CD159895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAAATGAACCCTCAACTGGGCGTTCTTCTGGGACGGCCATTTTAGCACCATTATTGAAAAACTTGTCCAAGACTGTTTCAATTAGTTGCTGGTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTTCTCTGCTG      ATAATAATAATAACTCCGAAAATTCACCGGCAATTATTACAGCTTGTTTGATTACCAAATCACGTCTCGGTTGCTGTATTTC TTTTTGCCAGAATCCTCGACGACAATTGTTGT ATTTTTTTTGTGT                                                                                                                                                                           ]
[-] EMBL CD147913             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAACTTGGCGTTTTTCTGGGACGGCCATTTTAGCACCATTATTGGAAAACTTGTCCAAGACTGTTTCAAATAGTTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTTTAAAGAAATCGTCATTTTTTTTCTGCTG      ATAATAATAATAACTCCGGAAATTCACCGGCAAATATTACAGCTTGTTTGAATACCCAATCACGTCTCGGTTGCTGTATTTC TTTTTGCCAGAATCCTCGACGACAATTGTTGT A TTTTTTTGTGTACCC  AAAAACCCCGACAACAA    TT TTTTTTT                                                                                                                                      ]
[+] EMBL CD200733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTAGCACCATTATTGAAAAACTTGTCCAAGACTGTCTCAATTAGTTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTT TCTGCTGATAATAATAATAATAATAATTCCGAAAATTCACCGGCAATTATCACAGCTTGTTTGATTCCCAAATCACGTCTCGTTTGCTGTATTTC TTTTTGCTAGAATCCTCGACGACAATTGTTGT A TTTTTTTGTGTA CC  AAAAACCCCGACAACAATTGTTT TTTTTTTTTTTGCCGAAATCCCGGTCGCC A                                                                                                              ]
[-] EMBL AI976960             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTGTTTCAATTAGTTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTT TCTGCTG      ATAATAATAATAACTCCGAAAATCCACCGGCAATTATTACAGCTTGTTTGATTCCCAAATCACGTCTCGGTTGCTGTATTTC TTTTTGCCAGAATCCTCGACGACAATTGTTGT A TTTTTTTGTGTA CC  AAAAACCCCGACAACAA    TTGTTTTTTTTTTTGCCGAAATCCCCGTCGCCAACTGTTATGACGTGTAAGTTGACCGCTTTTTTCGTATCCTAACTATTCGGATAACCCCAGGCTAGCACTACTCAGCGACTTGAAAGACCAGAGAGAAGACACGAGTATCAG]
[-] EMBL CD147443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTTCAATTAATTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCAATTTTTTTCTGCTG      ATAATAATAATAACTCCGAAAATTCACCGGCAATTATTACAGCTTGTTTGATTACCAAATCACGTCTCGGGTGCTGTATTTC TTTTTGCCAGAATCCTCGACGACAATTGTTGTAA TTTATTTGTGTA CCCAAAAAACCCCGACAACAA    TT TTTTT                                                                                                                                        ]
[-] EMBL CD184179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTTCTCTGCTG      ATAATAATAATAACTCCGAAAATTCACCGGCAATTATTACAGCTTGCTTGATTACCAAATCACGTCTCGGTTGCTGTATTTCTTTTTTGCCAGAATCCTCGACGACAATTGTTGT A TTTTTTTGTATA CC  AAAAACCCCGACAACAA    TT GTTTTTTTTTTGCCGAAATCCCCGTCGCC ACTGTTATGTCTCGTAGGTTGAACGCTTTATTCGGATCCTAGCTATTC                                                               ]


>consensus_10807#0 GCACTTTACTACCAGGTTCAATTATGTACAGAAAAATAGGGNTTTTATAGTAATTAAAAG ACCTTGAGATTCCATAGTAACAGTATGTTAACAGCCAATCAGGACCTTGTTATTTTAGTA GCATAGCTTCTAACTAATCGCTGATTGGNTGGTCTCNTTATGAGCCTCTCTAGAGTTTAT CGTAAGCCGACCTAACACCTCCCTTTTTTTTTGAAGATTCGAAGATTAGATTCTGATTTT AAAAAAATTATCTGTAGGTTGAAATTCTCCAACATTTCCTCCCCCACGAAATAATGTTGG ATCTTCATATCTCCAATTTACAATTAATATGACTTTATTTAGAACACATTTCTCGTATTG AATGCAGAATCCACTAGAAATGAATAGATAATGATGAACGATATTTGATTTTAGGTCATC GGAATTTGGCTTTTCTGAAACATCTCCATCAAATCCATTAAGATTTTCACTGGAGGATAT TTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGA TTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCACCATT CCAGCTTTCTTGGCCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCTTC AGAAATCGGCGGATTGAGTGGTGCTTCATTAGACTCTGGGCTCAGGGCTTTGTCTACGGA ACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCATTTAGCAAGATATT GTCTTGCTCTGAACCGGCCAACTTACCCATTTTGCATTTTCCATCAGATATAAAGGGAAA TGAACCCTCAACTTGGCGTTCTTCTGGGACGGCCATTTTAGCACCATTATTGAAAAACTT GTCCAAGACTGTTTCAATTAGTTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGCTC TAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTTCTCTGCTGATAATAATAAT AACTCCGAAAATTCACCGGCAATTATTACAGCTTGTTTGATTACCAAATCACGTCTCGGT TGCTGTATTTCTTTTTGCCAGAATCCTCGACGACAATTGTTGTATTTTTTTGTGTACCAA AAACCCCGACAACAATTTTTTTTTTTTTGCCGAAATCCCCGTCGCCACTGTTATGACGTG TAAGTTGACCGCTTTTTTCGTATCCTAACTATTCGGATAACCCCAGGCTAGCACTACTCA GCGACTTGAAAGACCAGAGAGAAGACACGAGTATCAG



consensusID : consensus_10807#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 266
fasta sequence
                              [TTTTTCTTTGTTTGGCTTTTCTGAAACATCTCCATCAAATTCATTAAGATTTTCACTGGAGGATATTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGGCCGATATCATGTAACCCATAGTTTAATTCCGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTG]

[-] EMBL CD119570             [TTTTTCTTTGTTTGGCTTTTCTGAAACATCTCCATCAAATTCATTAAGATTTTCACTGGAGGATATTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCACCATTCCAGCTTTCTTGGCCGATATCATGTAACCCATAGTTTAATTCCGACTGAAGTTTGTCTTCAGAAATCGGCGGATTGAGTG]
[-] EMBL CD090271             [                                                               TATTTGATAGCTAGGGGAAGCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTGATTCAACCGACTTAGTTCCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGTACCATTCCAGCT                                                                          ]


>consensus_10807#1 TTTTTCTTTGTTTGGCTTTTCTGAAACATCTCCATCAAATTCATTAAGATTTTCACTGGA GGATATTTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGC ATTTGATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGC ACCATTCCAGCTTTCTTGGCCGATATCATGTAACCCATAGTTTAATTCCGACTGAAGTTT GTCTTCAGAAATCGGCGGATTGAGTG



consensusID : consensus_10807#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 207
fasta sequence
                              [AGCGACTTGGAAGACCAGAGAGAAGACACGAGTATCAGAGAAGCACTTTACTACAAGGTTCAATTATGTACAGAAAAAACAGGGGTATTATAGTAACTAAAAGACCTTGAGATCCCATAGTAACAGTATGTTAAACAGCCAACCAGGACCTTGTTATTTTAGTAGCATAGCTTCTAACTAATCGCTGATTGGTTGGGCTCTTTATGA]

[-] EMBL CD171518             [AGCGACTTGGAAGACCAGAGAGAAGACACGAGTATCAGAGAAGCACTTTACTACAAGGTTCAATTATGTACAGAAAAAACAGGGGTATTATAGTAACTAAAAGACCTTGAGATCCCATAGTAACAGTATGTTAAACAGCCAACCAGGACCTTGTTATTTTAGTAGCATAGCTTCTAACTAATCGCTGATTGGTTGGGCTCTTTATGA]


>consensus_10807#2 AGCGACTTGGAAGACCAGAGAGAAGACACGAGTATCAGAGAAGCACTTTACTACAAGGTT CAATTATGTACAGAAAAAACAGGGGTATTATAGTAACTAAAAGACCTTGAGATCCCATAG TAACAGTATGTTAAACAGCCAACCAGGACCTTGTTATTTTAGTAGCATAGCTTCTAACTA ATCGCTGATTGGTTGGGCTCTTTATGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10807#0      GCACTTTACTACCAGGTTCAATTATGTACAGAAAAATAGGGNTTTTATAGTAATTAAAAG 60
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      ACCTTGAGATTCCATAGTAACAGTATGTTAACAGCCAATCAGGACCTTGTTATTTTAGTA 120
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      GCATAGCTTCTAACTAATCGCTGATTGGNTGGTCTCNTTATGAGCCTCTCTAGAGTTTAT 180
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      CGTAAGCCGACCTAACACCTCCCTTTTTTTTTGAAGATTCGAAGATTAGATTCTGATTTT 240
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      AAAAAAATTATCTGTAGGTTGAAATTCTCCAACATTTCCTCCCCCACGAAATAATGTTGG 300
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      ATCTTCATATCTCCAATTTACAATTAATATGACTTTATTTAGAACACATTTCTCGTATTG 360
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      AATGCAGAATCCACTAGAAATGAATAGATAATGATGAACGATATTTGATTTTAGGTCATC 420
consensus_10807#1      ------------------------------------------------------TTTTTC 6
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      GGAATTTGGCTTTTCTGAAACATCTCCATCAAATCCATTAAGATTTTCACTGGAGGATAT 480
consensus_10807#1      TTTGTTTGGCTTTTCTGAAACATCTCCATCAAATTCATTAAGATTTTCACTGGAGGATAT 66
consensus_10807#2      --------------------------------AGCGACTTGGAAGACCAG-AGAGAAGAC 27
                                                       *   * *  **    **   *** * * 

consensus_10807#0      TTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTG- 539
consensus_10807#1      TTGATAGCTAGGGGAATCATCATCTAATGAAATTGCCTTAGGTTTTTGATCAGCATTTG- 125
consensus_10807#2      ACGAGTATCAGAGAAG-CACTTTACTACAAGGTTCAATTATGTACAGAAAAAACAGGGGT 86
                         **     ** * *  **   *   *  *  **   *** **     *  * **   * 

consensus_10807#0      ATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCA-CCA 598
consensus_10807#1      ATTCAACCGACTTAGTTTCCTCATCTTCATAAGAATTTTCATCAAAATCATGTGCA-CCA 184
consensus_10807#2      ATTATAGTAACTAAAAGACCTTGAGATCCCA-----TAGTAACAGTATGTTAAACAGCCA 141
                       ***  *   *** *    ***     **  *     *   * **  **  *   ** ***

consensus_10807#0      TTCCAGCTTTCTTGGCCGATATCATGTAACCCGTAGTTTAATTCTGACTGAAGTTTGTCT 658
consensus_10807#1      TTCCAGCTTTCTTGGCCGATATCATGTAACCCATAGTTTAATTCCGACTGAAGTTTGTCT 244
consensus_10807#2      ACCAGGACCTTGTTATTTTAGTAGCATAGCTTCTAACTAATCGCTGATTGGTTGGGCTCT 201
                         *  *   *  *        *    ** *   **  * *   * ** **       ***

consensus_10807#0      TCAGAAATCGGCGGATTGAGTGGTGCTTCATTAGACTCTGGGCTCAGGGCTTTGTCTACG 718
consensus_10807#1      TCAGAAATCGGCGGATTGAGTG-------------------------------------- 266
consensus_10807#2      TTATGA------------------------------------------------------ 207
                       * *  *                                                      

consensus_10807#0      GAACCTTGTTTTTCTTTGACATCTGATACTGTCACAGTTTCATGTGCATTTAGCAAGATA 778
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      TTGTCTTGCTCTGAACCGGCCAACTTACCCATTTTGCATTTTCCATCAGATATAAAGGGA 838
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      AATGAACCCTCAACTTGGCGTTCTTCTGGGACGGCCATTTTAGCACCATTATTGAAAAAC 898
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      TTGTCCAAGACTGTTTCAATTAGTTGCTGCTGGAAGGCTAGCATCTGTTGTTGCCGGTGC 958
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      TCTAAGATTATCAGCGCCTGTTCTAAAGAAATCGTCATTTTTTCTCTGCTGATAATAATA 1018
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      ATAACTCCGAAAATTCACCGGCAATTATTACAGCTTGTTTGATTACCAAATCACGTCTCG 1078
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      GTTGCTGTATTTCTTTTTGCCAGAATCCTCGACGACAATTGTTGTATTTTTTTGTGTACC 1138
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      AAAAACCCCGACAACAATTTTTTTTTTTTTGCCGAAATCCCCGTCGCCACTGTTATGACG 1198
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      TGTAAGTTGACCGCTTTTTTCGTATCCTAACTATTCGGATAACCCCAGGCTAGCACTACT 1258
consensus_10807#1      ------------------------------------------------------------
consensus_10807#2      ------------------------------------------------------------
                                                                                   

consensus_10807#0      CAGCGACTTGAAAGACCAGAGAGAAGACACGAGTATCAG 1297
consensus_10807#1      ---------------------------------------
consensus_10807#2      ---------------------------------------
                                                              




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)