These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10817#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 22 consensus length = 1058 fasta sequence [CTCCGAGCCAAGATTCGGCACGAGGGTTCTCTTGTTGTTGATAGGAGGTCTGGTGGTTTCTCGTTCGAAAATTGT-TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC-AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACTATGGGTAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTAAAATTAGTACGTGATGGAATAGCAGCTGGAATATTCAATGATATGGNGTCTGGCAGTAATGTCGATATATGTATTATTACTAAAGATGGAACC-ACTTATATACGATCATATGATGAAGCTAATGTCAAAGGCAAGAGAGCAGAAAA-GTATAATCCTCCAGAAGGTACTACTTCTGTTCTCCACAAAAGTGTTCATCATGTTGAGTTCGATGTGGTCACAACACGTGTTGTTCGAGATATACCTGCTCATAGTGTTGAGACAATGGATCTTTCTTAAGTGTAATTTAAATTTTCTCAAATGAATTGTGATTCCTATGTTGTTTGCTTTATCGGTTTTTCAAATAAATTCACCGTAAAGACTTTCCTTTTTGTTATCGAAATGTTTTAACACAGTACAATATCCCTATTCTGTTTATTTTGAATTACTAATATATAATCAACACCATTCAAATTCATTCTATAGTAAAG] [+] EMBL CD083204 [CTCCGAGCCAAGATTCGGCACGAGGGTTCTCTTGTTGTTGATAGGAGGTCTGGTGGTTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACTATGGGTAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTAAAATTAGTACGTGATGGAATAGCAGCTGGAATATTCAATGATATGGNGTCTGGCAGTAATGTCGATATATGTATTATTACTAAAGATGGAAAC ACTTA ] [-] EMBL CD126205 [ GTTGATAGGAGGTCTGGTGGTTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ] [+] EMBL CD202313 [ GGTCTGCTGGTTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCATAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATGTATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCG ] [+] EMBL CD155822 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCT ] [+] EMBL CD118367 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ] [+] EMBL CD155859 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ] [+] EMBL CD155595 [ TTTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATGTGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ] [-] EMBL CD155751 [ TTCTCGTTCGAAAA TGTANCCAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCACAAGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ] [-] EMBL CD155829 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCAGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ] [-] EMBL CD118371 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ] [-] EMBL CD118335 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGCTATCGCT ] [-] EMBL CD155655 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGCTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCT ] [-] EMBL CD155678 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGGACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTgccgc ] [-] EMBL CD155708 [ TTCTCGTTCGAAAATTGT TACAGGAATAAACTCATCGAACAAAAAGGCTTCGAATTGCCCAAAGCCGTAAAGACTGGAACAACAATATGTGGTGTCGTTTTCAAGAATGGAGTAGTTCTAGGTGCAGATACACGGGCAACAGAAGGTACTGTAGTTGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTC ] [+] EMBL CD114466 [ TGCTGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATA ] [-] EMBL CD114602 [ TGAGAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTCACAAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTGTTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCGTGGGTCAACGGATAA ] [-] EMBL CD114422 [ taAGAAGAAATGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGAGCTGGGACTGCAGCCGACACCCAAATGGTTACGCTGATGATTTCTTCACGAGTCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGCTCCACTTCGTCTCCTTAAACAAAATATATATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAA ] [+] EMBL CD155594 [ GAAGAACTGCTCAAAAATTCATCGCATTTCCGAAAATATATATTGCTGTGGTGCTGGGACTGCAGCCGACACCCAAATGGTTACACTGATGATTTCTTTACAAGGCGAACTCCAC AGTTTGAATACGGGCAGGACTCCTCGTGTTATCGC ] [+] EMBL CD141881 [ CGCTCCACTTCGTCTCCTTAAACGCTATCTCTATCAGTACCAGGGTTATGTTGGTGCTGCACTCGTATTAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTATTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACT ] [+] EMBL CD141014 [ CCAGGGTTATGTTGGTGCTGCACTCGTATCAGGTGGTGTGGACTCAACAGGCCCTCATTTGTATAGTACTGCGCCTCATGGGTCAACGGATAAATTACCGTATATCACTATGGATAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTANAATT ] [-] EMBL CD076779 [ CATGGGTCAACGGATAAATTACCGTATATCACTATGGGTAGCGGGAGTCTTGCGTGTATGTCTGTACTTGAATCAAGATTTAAATTTGATATGGAACAAGATGAAGCCGTAAAATTAGTACGTGATGGAATAGCAGCTGGAATATTCAATGATATGGGGTCTGGCAGTAATGTCGATATATGTATTATTACTAAAGATGGAACA ACTTATATACGATCATATGATGAAGCTAATGTCAAAGGCAAGAGAGCAGAAAA GTATAATCCTCCAGAAGGTACTACTTCTGTTCTCCACAAAAGTGTTCATCATGTTGAGTTCGATGTGGTCACAACACGTGTTGTTCGAGATATACCTGCTCATAGTGTTGAGACAATGGATCTTTCTTAAGTGTAATTTAAATTTTCTCAAATGAATTGTGATTCCTATGTTGTTTGCTTTATCGGTTTTTCAAATAAATTCACCGTAAAGACTTTCCTTTTTGTTATCGAAATGTTTTAACACAGTACAATATCCCTATTCTGTTTATTTTGAATTACTAATATATAATCAACACCATTCAAATTCATTCTATAGTAAAG] [-] EMBL SMAA25682 [ ATGTATTATTACTAAAGATGGAACCAACTTATATNCGATCATATGATGAAGCTAATGTCAAAGGCAAGAGAGCAGAAAAGGTATAATCCTCCAGAAGGTACTACTTCTGTTCTCCACAAAAGTGTTCATCATGTTGAGTTCGATGTGGTCACAACACGTGTTGTTCGAGATATACCTGCTCATAGTGTTGAGACAATGGATCTNTCTTAAGTGTATTTTAAATTTTCTCAAATGAATTGTGATTCCTATGTTGTTTGCTTTATCGGTTTTTCAAATAAATTC ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||