These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10829#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 822 fasta sequence [CTCGGAGCCAANAATTCGGCACGAGGGTTCGAATCCAAATCAGAAATACAGTTGGCCAACTATGCAGCAAGTAGAAATAAAGTGATTTGGATATACAGTGATAGTCTTGAACTGTGATTCCTGTCCAAATTGCATTACTCTCTTTCCTATTTTTTCCCATAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGATGGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTTTTAATACCAGACGTTCAGAGTCGGTGTGCAGATATTGAGGAAGATCGATTAGCTGAAAGCATTAAACAAACGGAGTCTTCAATGGAACCGTGCTCTAATGGTACTAGTGTTCCAACTGATGACATATCACACTTGGTAAGGAAAAAGCGCCCTGTTTCTGGAACGACACCTGTGGAATCTGTAG-AAATATAAGTCTTGAATTAAATGGTCATGGAAACTCAACTTNCAAGAAAGTGAAGCTTATAGATTCTAATGGCGAATCCTTGCCG-ATGANAACGGTNGTTAGNTAGTTGATGTATGCTTCTAGATATNNAACCGGTTCCCAATANNTGCATTCATTTTACAGATTTTGTCAGAAATTTTGGCTATCGNTTTTGAATAATTATCTGCAGATACTTATTCAAATAAAGTTAT] [+] EMBL CD081968 [CTCGGAGCCAANAATTCGGCACGAGGGTTCGAATCCAAATCAGAAATACAGTTGGCCAACTATGCAGCAAGTAGAAATAAAGTGATTTGGATATACAGTGATAGTCTTGAACTGTGATTCCTGTCCAAATTGCATTACTCTCTTTCCTATTTTTTCCCATAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGATGGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTTTTAATACCAGACGTTCAGAGTCGGTGTGCAGATATTGAGGAAGATCGATTAGCTGAAAGCATTAAACAAACGGAGTCTTCAATGGAACCGTGCTCTAATGGTACTAGTGTTCCAACTGATGACATATCACACTTGGTAAGGAAAAAGCGCCCTGTTTCTGGAACGACACCTGTGGAATCTGTAG AAATATAAGTCTTGAATTAAATGGTCATGGAAACTCAACTTNCAAGAAAGTGAAGCTTATAGATTCTAATGGCGAATCCTTGCCG ATGANAACGGTNGTTAGNTAGTTGATGTATGCTTCTAGATATNNAACCGGTTCCCAATANNTGCATTCATTTTACAGATTTTGTCAGAAATTTTGGCTATCGNTTTTGAATAATTATCTGCAGATACTTATTCAAATAAAGTTAT] [+] EMBL AW017202 [ GTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGATGGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTTTTAATACCAGACGTTCAGAGTCGGTGTGCAGATATTGAGGAAGATCGATTAGCTGAAAGCATTAAACAAACGGAGTCTTCAATGGAACCGTGCTCTAATGGTACTAGTGTTCCAACTGATGACATATCACA ] [+] EMBL CD145601 [ ATGGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTTTTAATACCAGACGTTCAGAGTCGGTGTGCAGATATTGAGGAAGATCGATTAGCTGAAAGCATTAAACAAACGGAGTCTTCAATGGAACCGTGCTCTAATGGTACTAGTGTTCCAACTGATGACATATCACACTTGGTAAGGAAAAAGCGCCCTGTTTCTGGAACGACACCTGTGGAATCTGTAGAAAATATAAGTCTTGAATTAAATGGTCATGGAAACTCAACTTCCAAGAAGGTGAAGCTTATAGATTCTAATGGCGAATCCTTGCCGAATGAAAA ] consensusID : consensus_10829#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 788 fasta sequence [AGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATCAAGTCATAGATGCTATGTGTGAAGAAAACAATCAGGAAAACAGTGAAACCAAAGAGGATGATGCTCCTAGTGAAGACATTGAAGGTGTAGGCGGAAATGATGCTCCCAGTAAAGACATTGAAGCTGTAAGCAGAAATGATGCTGCTGGTGATAATCCGACGGATGACGCTGTCGAGGAAGCTGAGGGTGGCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCCATAATAATCCCACAGACTCGGAAGCTGCTAAATCTGATGATGAAGATGATGTGTCGAATCTGCAAATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGTTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTA-GTCGCGAGAAAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGATGGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTTTTAATACCAGACGTTC] [-] EMBL CD171125 [AGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATCAAGTCATAGATGCTATGTGTGAAGAAAACAATCAGGAAAACAGTGAGACCAAAGAGGATGATGCTCCTAGTGAAGACATTGAAGGTGTAGGCGGAAATGATGCTCCCAGTAAAGACATTGAAGCTGTAAGCAGAAATGATGCTGCTGGTGATAATCCGACGGATGACGCTGTCGAGGAAGCTGAGGGTGGCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCCATAATAATCCCACAGACTCGGAAG ] [-] EMBL CD157164 [ TGTGTGAAGAAAACAATCAGGAAAACAGTGAAACCAAAGAGGATGATGCTCCTAGTGAAGACATTGAAGGTGTAGGCGGAAATGATGCTCCCAGTAAAGACATTGAAGCTGTAAGCAGAAATGATGCTGCTGGTGATAATCCGACGGATGACGCTGTCGAGGAAGCTGAGGGTGGCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCCATAATAATCCCACAGACTCGGAAGCTGCTAAATCTGATGATGAAGATGATGTGTCGAATCTGCAAATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGCTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAA ] [-] EMBL CD157207 [ AGAAACCAATCAGGAAAACAGTGAAACCAAAGAGGATGATGCTCCTAGTGAAGACATTGAAGGTGTAGGCGGAAATGATGCTCCCAGTAAAGACATTGAAGCTGTAAGCAGAAATGATGCTGCTGGTGATAATCCGACGGATGACGCTGTCGAGGAAGCTGAGGGTGGCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCCATAATAATCCCACAGACTCGGAAGCTGCTAAATCTGATGATGAAGATGATGTGTCGAATCTGCAAATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGTTCCCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAA ] [+] EMBL CD083580 [ gGAAACCAAAGAGGATGATGCTCCTAGTGAAGACATTGAAGGTGTAGGCGGAAATGATGCTCCCAGTAAAGACATTGAAGCTGTAAGCAGAAATGATGCTGCTGGTGATAATCCGACGGATGACGCTGTCGAGGAAGCTGAGGGTGGCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCCATAATAATCCCACAGACTCGGAAGCTGCTAAATCTGATGATGAAGATGATGTGTCGAATCTGCAAATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGTTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTA GTCGCGAGAAAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCCAGCAGCTCTT ] [-] EMBL CD119246 [ ATCCGACGGATGACGCTGTCGAGGAAGCTGAGGGTGNCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCCATAATAATCCCACAGACTCGGAAGCTGCTAAATCTGATGATGAAGATGATGTGTCGAATCTGCAAATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGTTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTA GTCGCGAGAAAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTG ] [+] EMBL CD118723 [ GAAGCTGAGGGTGGCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCCATAATAATCCCACAGACTCGGAAGCTGCTAAATCTGATGATGAAGATGATGTGTCGAATCTGCAAATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGTTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTA GTCGCGAGAAAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGATGGAGAAGAAAAAGAGCTTTTACAGGTTACACTTAAAGAGATAGAGCTTTTAATACCA ] [+] EMBL CD146479 [ ATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGTTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTA GTCGCGAGAAAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTG ] [+] EMBL CD169226 [ GGAGGTTATTGAAGTAGCCAAAAAGCTGTTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTA GTCGCGAGAAAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGATGGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTCTTAATACCAGACGTTC] [+] EMBL CD188923 [ GCTGTTCTCACAAAAAGATGACGAGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTA GTCGCGAGAAAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTCGAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACGACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGTGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAACCGAAGCTGTTGACCAAAAAGATGGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGA ] [-] EMBL CD068232 [ tCTTGGTAAGATTATGTCGCGAGAAAGAAGATTATGACCAAGCAGTAGTGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCATTTTGGGTC AAAAGATCGTCGTG ] consensusID : consensus_10829#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 572 fasta sequence [GTCATCTTGGTCCTCAGGCTCGTCCCCCTCACATTCATTTGATTCGCCACCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCAGCTTCCGAGTCTGTGGGATTATTATGGAGCTCATCTTGGTCCTCAGGCTCGTCCCCCTCACATTCATTTGATTCGCCACCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGCTTCAATGTCTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGACCCGGTACTAATCACGTTGAGACAAATCATTCATACTTACTCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAAGTAGGAACAG] [+] EMBL BG930643 [GTCATCTTGGTCCTCAGGCTCGTCCCCCTCACATTCATTTGATTCGCCACCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCAGCTTCCGAGTCTGTGGGATTATTATGGAGCTCATCTTGGTCCTCAGGCTCGTCCCCCTCACATTCATTTGATTCGCCACCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGCTTCAATGTCTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGAC ] [+] EMBL BG931050 [ gTCGTCCCCCTCACATTCATTTGATTCGCCAGCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGCTTCAATGTCTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTAT ] [+] EMBL CD142818 [ CTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTACTAATCACGTTGAGACAAATCATTCATACTTACTCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAAGTAGGAACAG] consensusID : consensus_10829#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 410 fasta sequence [ACATTCATTTGATTCGCCACCCTCAGCTTCCTCG-ACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGC-TTCAATGTCTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAGTTAGGAACAGCAAGAGCTTCATGAAAGTCANCAT] [+] EMBL CD163472 [ACATTCATTTGATTCGCCACCCTCAGCTTCCTCG ACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGC TTCAATGTCTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATAACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAGTTAGGAACAGCAAGAGCTTCATGAAAGTCANCAT] [+] EMBL CD123323 [ GATTCGCCACCCTCAGCTTCCTCG ACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGC TTCAATGTCTTTATTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGGCTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATGCGCTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAGTTAGGAACAGCAAGAGCTTCATG ] [-] EMBL CD146467 [ ATTCGCCACCCTCAGCTTCCTCG ACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGC TTCAATGTTTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAGTTAGGAACAGCAAGAGCTTCATGA ] [+] EMBL CD161506 [ TTCGCCACCCTCAGCTTCCTCG ACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGC TTCAATGTCTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAGTTAGGAACAGCAAGAGCTTCATG ] [+] EMBL CD064158 [ CAGC TCCTCGNACAGCGTCATCCGTCGGATTATCACCAGCAGCATCATTTCTGCTTACAGCGTTCAATGTCTTTACTGGGAGCATCATTTCCGCCTACACCTTCAATGTCTTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCACACATAGCATCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATT ] [+] EMBL CD123294 [ TCTATGACTTGATTGGAAATATCTTCCTTTTCTTCAGTTGTCAACTCAGGCCCAGGTTCAATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATGCGTTCCCGATAACTGAACTTTCTATTCGTGATAGTTCGAGAAGTGCAGTACCATACAGTAAGTTAGGAACAGCAAGAGCTTCGTG ] consensusID : consensus_10829#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 259 fasta sequence [CTGTGGAATCTGTAGAANATATAAGTCTTGAATTAAATGGTCATGGAAACTCAACTTCCAAGAAGGTGAAGCTTATAGATTCTAATGGCGAATCCTTGCCGAATGAAAACGGTGTTTAGTTAGTTGATGTATGCTTCTAGATTATAAACCGGTTCCAAATAATTGCATTTCATTTTTACAGATTTTGTCAGAAATTTTTGTCTATCGTTTTTGAACAATTTATCTGCAGATACTNTATTCCAAAAATAAAGTTTATGTA] [-] EMBL CD134527 [CTGTGGAATCTGTAGAANATATAAGTCTTGAATTAAATGGTCATGGAAACTCAACTTCCAAGAAGGTGAAGCTTATAGATTCTAATGGCGAATCCTTGCCGAATGAAAACGGTGTTTAGTTAGTTGATGTATGCTTCTAGATTATAAACCGGTTCCAAATAATTGCATTTCATTTTTACAGATTTTGTCAGAAATTTTTGTCTATCGTTTTTGAACAATTTATCTGCAGATACTNTATTCCAAAAATAAAGTTTATGTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10829#0 CTCGGAGCCAANAATTCGGCACGAGGGTTCGAATCCAAATCAGAAATACAGTTGGCCAAC 60 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 ------------------------------------------------------------ consensus_10829#3 ------------------------------------------------------------ consensus_10829#1 ------------------------------------------------------------ consensus_10829#0 TATGCAGCAAGTAGAAATAAAGTGATTTGGATATACAGTGATAGTCTTGAACTGTGATTC 120 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 ------------------------------------------------------------ consensus_10829#3 ------------------------------------------------------------ consensus_10829#1 -----------------------------------------------AGGCCCAGGTTCA 13 consensus_10829#0 CTGTCCAAATTGCATTACTCTCTTTCCTATTTTTTCCCATAGGAATGCTTAGAAATCCGT 180 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 ------------------------------------------------------------ consensus_10829#3 ------------------------------------------------------------ consensus_10829#1 ATGATCTCATTATCCGATTCTGAATCATCTTTATCTGGATCCGGTATCCCATCCAATCAA 73 consensus_10829#0 ACTGCCATTTTGGGTCAAAAAGATCGTCGTGTAGCTGAGAGCCATTACCAACTGGGAACG 240 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 ------------------------------------------------------------ consensus_10829#3 ------------------------------------------------------------ consensus_10829#1 GTCATAGATGCTATGTGTGAAGAAAACAATCAGGAAAACAGTGAAACCAAAGAGGATGAT 133 consensus_10829#0 ACATATGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAG 300 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 ------------GTCATCTTGGTCCTCAGGCTCGTCCCCCTCACATTCATTTGATTCGCC 48 consensus_10829#3 ------------------------------------------------------------ consensus_10829#1 GCTCCTAGTGAAGACATTGAAGGTGTAGGCGGAAATGATGCTCCCAGTAAAGACATTGAA 193 consensus_10829#0 TGTCTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGAT 360 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 ACCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCAGCTTCCGAGTCTGT 108 consensus_10829#3 ------------------------------------------------------------ consensus_10829#1 GCTGTAAGCAGAAATGATGCTGCTGGTGATAATCCGACGGATGACGCTGTCGAGGAAGCT 253 consensus_10829#0 GGAGAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTTTTAATACCAGAC 420 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 GGGATTATTATGGAGCTCATCTTGGTCCTCAGGCTCGTCCCCCTCACATTCATTTGATTC 168 consensus_10829#3 ---------------------------------------------ACATTCATTTGATTC 15 consensus_10829#1 GAGG--GTGGCGAATCAAATGAATGTGAGGGGGACGAGCCTGAGGACCAAGATGAGCTCC 311 consensus_10829#0 GTTCAGAGTCGGTGTGCAGATATTGAGGAAGATCGATTAGCTGAAAGCA-TTAAACAAAC 479 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 GCCACCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCA-GCATCATTTC 227 consensus_10829#3 GCCACCCTCAGCTTCCTCGACAGCGTCATCCGTCGGATTATCACCAGCA-GCATCATTTC 74 consensus_10829#1 ATAATAATCCCACAGACTCGGAAGCTGCTAAATCTGATGATGAAGATGATGTGTCGAATC 371 consensus_10829#0 GGAGTCTTCAATGGAACCGTGCTCTAATGGT--ACTAGTGTTCCAACTGATGACATATCA 537 consensus_10829#4 ------------------------------------------------------------ consensus_10829#2 TGCTTACAGCTTCAATGTCTTTACTGGGAGC--ATCATTTCCGCCTACACCTTCAATGTC 285 consensus_10829#3 TGCTTACAGCTTCAATGTCTTTACTGGGAGC--ATCATTTCCGCCTACACCTTCAATGTC 132 consensus_10829#1 TGCAAATCGCTTGGGAGGTTATTGAAGTAGCCAAAAAGCTGTTCTCACAAAAAGATGACG 431 consensus_10829#0 CACTTGGTAAGGAAAAAGCGCCCTGTTTCTGGAACGACACCTGTGGAATCTGTAGA-AA- 595 consensus_10829#4 ----------------------------------------CTGTGGAATCTGTAGA-ANA 19 consensus_10829#2 TTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCAC-ACA 344 consensus_10829#3 TTCACTAGGAGCATCATCCTCTTTGGTTTCACTGTTTTCCTGATTGTTTTCTTCAC-ACA 191 consensus_10829#1 AGGAAAGCAAGCTGAATGTTGCTGAGTGCCTAGAAAAGCTTGGTGAGATTAGTCGCGAGA 491 * * * * consensus_10829#0 TATAAGTCTTGAATTAAATGGTCATGGA---AACTCAACTTNCAAGA---AAGTGAAGCT 649 consensus_10829#4 TATAAGTCTTGAATTAAATGGTCATGGA---AACTCAACTTCCAAGA---AGGTGAAGCT 73 consensus_10829#2 TAGCATCTATGACTTGATTGGAAATATC---TTCCTTTTCTTCAGTTGTCAACTCAGGCC 401 consensus_10829#3 TAGCATCTATGACTTGATTGGAAATATC---TTCCTTTTCTTCAGTTGTCAACTCAGGCC 248 consensus_10829#1 AAGAAGATTATGACCAAGCAGTAATGGACCTAAAGGAATGCTTAGAAATCCGTACTGCCA 551 * * * * ** * * consensus_10829#0 TATAGATTCTAATGGCGAATCCTTGCCGA-TGANAACGGTNGTTAGNTAG--TTGATGTA 706 consensus_10829#4 TATAGATTCTAATGGCGAATCCTTGCCGAATGAAAACGGTGTTTAGTTAG--TTGATGTA 131 consensus_10829#2 C--AGGTTCAATGATCTCATTAT--CCGATTCTGAATCATCTTTATCTGG--ACCCGGTA 455 consensus_10829#3 C--AGGTTCAATGATCTCATTAT--CCGATTCTGAATCATCTTTATCTGG--ATCCGGTA 302 consensus_10829#1 TTTTGGGTCAAAAAGATCGTCGT--GTAGCTGAGAGCCATTACCAACTGGGAACGACATA 609 * ** * * * * * * * * * ** consensus_10829#0 TGCTTCTAGATAT--NNAACCGGTTCCCAATANNTGCATTCA---TTTTACAGATTTTGT 761 consensus_10829#4 TGCTTCTAGATTA--TAAACCGGTTCCAAATAATTGCATTTCAT-TTTTACAGATTTTGT 188 consensus_10829#2 CTAATCACGTTGAGACAAATCATTCATACTTACTCCCATCCAATGCGTTCCCGAT---AA 512 consensus_10829#3 ---------------------------------TCCCATCCAATGCGTTCCCGAT---AA 326 consensus_10829#1 TGCGGTTTCTGGAGATTTAGGAAACGCAAGCAGCTCTTTCAAAGCTTCAGTTGAGT--GT 667 * ** consensus_10829#0 CAGAAATTTTGG-CTATCGNT-T----TTGAATAATT-ATCTGCAGAT--ACTT-ATTC- 810 consensus_10829#4 CAGAAATTTTTGTCTATCGTT-T----TTGAACAATTTATCTGCAGAT--ACTNTATTCC 241 consensus_10829#2 CTGAACTTTCTATTCGTGATAGT----TCGAGAAGTGCAGTACCATAC--AGTAAAGTAG 566 consensus_10829#3 CTGAACTTTCTATTCGTGATAGT----TCGAGAAGTGCAGTACCATAC--AGTAAGTTAG 380 consensus_10829#1 CTCAAGTTGTTGGCTGAAGATGTCAGGTCAAAAATCGAAGCTGTTGACCAAAAAGATGGA 727 * ** ** * * * * * * * consensus_10829#0 --AAATAAAGTT-AT--------------------------------------------- 822 consensus_10829#4 AAAAATAAAGTTTATGTA------------------------------------------ 259 consensus_10829#2 GAACAG------------------------------------------------------ 572 consensus_10829#3 GAACAGCAAGAGCTTCATGAAAGTCANCAT------------------------------ 410 consensus_10829#1 GAAGAAAAAGAGCTTTTACAAGTTACACTTAAAGAGATAGAGCTTTTAATACCAGACGTT 787 * * consensus_10829#0 - consensus_10829#4 - consensus_10829#2 - consensus_10829#3 - consensus_10829#1 C 788 |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||