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These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10834#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 21 consensus length = 3822 fasta sequence
[GGCTGATAGCTATGTCANAATTTCTGTCTTGCGATTATATATGTCAACTAGATCTTGTCTACTCATTTCTCCTCCATGCAATGAAAAGCCTTGTGTAACTTTTTGTTTCTAGTTAAATGAAGGAATGGCAGCGTCTGAAGTCACGAGTCCAACGAACATCCAAGATGATTTAAAAAATGAAAGTTTAGAAGCTACTGTATCTCTGGATAAACTCATAATGGGAGGCGCACCAAAGTCATCGGGATCACTGTCTGCTAGTGATGATCATGTGCCTTCCACAACTTACGTTACAATCCATCTCCCGGACGGGACCCAGGGATCAACTCTGAGTCAACAAAAATTGCAGGAACTTATCATGCACCTGTCCCAGTCTGGTCAGATTCAGCTACGAGAAGATAGCAAGATTGTAATAGATCTTAAATTCACTGGTAAGTCGGGCGACCAAGGGGCTCAAACAAAATTGGAAAATTCTTCGCTCCAACACTCTGCTGTGTCTAGTTGTACGGCATCACAAATACAAACCATAGCTTCCAGCAACCCTCATCGTGTTTTACAGGTTGGCAGCCCGGGTTCCGATGGAGTTCAAATTGTACGCACTATACCTTCTTTTGTCAGTTCTACTACTCAAATAATTTCATTTCCAACTGTTGCAACACAACAACCAGTCGCAGCCCAGTCAAGCAATCCTAGACAACAAATTCAGCAACAACCTACTTACATTCTAGTCCCAGCAGCTCAGCTAGCAAGTGGTGGAGAGAATCAAGTGTTTGCAAGCACACCTATACGTGCTGTTACAGCAGGACACACAATGCTTCGTACTTCTGGAATAGGTATTAACAATAATCAAACTGTTAACACAAGCAGTGTTAATTTAAGTTCAGCTGATCGAAGTATTATTCTAGTACAACAACCAGTTGCTGGAACTAGTATTCACGTTTGTTCTACAGGTACAATCGTTCCTGGTTCAAGTAGTGGCAGTGGTACCACTTTAGTTCCTTTACGACAATTAGGCGTATCTACTTGTGGCGGCAATGGATTGGTGTCTAGTGCAGGTTCTACTCGTCTTATCGGATCAAATATTGGTATTGAGTTGTTTTCAAATACAGGCGCAGTTGGATCACGATCGTCTCAAGGTCAAGGGGGTTCAATGGGATTGGTGACAATTTCAGCGAATGCAGGTGTATCTGGGTCTTCATCCTCCGGAACTCCTCAGCGTGAGTCAACTTGGCAGCAATATGTCAAACAGTTCACGAAACTGGGTCCCTGTCCAATCTGTGGGGATAAAATCTCTGGTTATCATTATGGGATATTTTGTTGTGAATCCTGCAAAGGCTTTTTCAAACGGACTGTTCAGAATGCTAAAAGATATGCCTGTCATCGTCCTAATGCTTCTTCTCGATGTGAAATAAATGTAGCTTCACGCAAGAAATGTCCCGCTTGTCGCTTTCTAAAATGCGTAGATAAAGGGATGCGTATTGAAGCTATTCGTTCGGATCGTACACGTGGTGGACGTAGCATGTATCCTGGTTCACGTTATTTGCGTCAAATTGCAGCACGGGTTAGTGGGAATCGCTCTACTTCTGGTCTGGCCATCTCTAGTTCATGTATGGAATTTTCAACTTCAGATCTGGATGGGAATATGCTAGGTGGATTGACGGACCAAAGTATTATGTCAGATGATGCTGATCAACTTTCTTGCTCTGTTGTCGGACTCGCTGCGCATACTTTAGGCCCCGATGGTTTGCCAGCTTCAGAAGACGCGGGTGGTGGTGTTTATCTGGATCCTGGTGTTCTCGGTACTCATGATAATGATGAAGAAGAAATAGATTCTGGTAGTCTGCGTGTTGAACCAAATATTTTAGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCGTTTCGCCGTATTCAGGTAGACAGGTAATTATCGGTGGTTCAAACGAGTCAATTCCACGTACCAGGGAACAACTCCCAAAGATTATTCGGGATATCCTCCTTGTAGAGGAGACCATAGAAGCGGAACCCGAAGATGCATTAGAAATCGATTCTGCGGTTGCGTCAGAAACTGCAGCACCTGAGGGGGTTTCAGATGACGAGGCAGCTGTGTACCGCGCACTGTTGAATTTGGCAGACCCACGTTTATATCGAACAGTGCGTTGGTCTCGAGCACTTCCAGACTTCTCTTTACTCGACACGGACGATCAAATCCTTTTAATACAAAATTGTTGGGCAGACCTACTGTGTCTTGATTGTTGCTGGCGCTCTTTGCCTACTCCTTCGGAAATTCGTCTCACCTCAAGTAAATGTATCAATCTTGAAGCTGCACGTGAAATGGGTGCTGAAGAAATAGTTGAGAGAATTTTACAACTCACTCAATCTTTAACAAGATTACAACTGGATATTGTGGAATATGCATGTTTAAAGGTCATTGTCCTAATGCAAGCAGACTTGAACAATTTAAAAGCAAGTTCTCAAGTTCGATCCTATCAAGAATCTGTTCGACGGCTACTAATGGATTATGTCACCAAGTCGTCACCTGATATAAATGATAAGTTTAACAAATTGATCAATCGAATTCCTGAACTACGCAAAACAAGTCAGGCTGCCCGCTTGATGCTTGTTGATTTGGATCTATCTTCTTATTTATCAACTAATTCTCTTTTAATGGAACTTTTACGCAGTGATATTCAGAGATATACACCAAATAATGGAACAAACAATTCGACAGAATCCACAACAACAGTATCAATGCAAGGTTCTGCCAATTCTGGTTTAAAAACTGTCTCAGTCACTTTAGGGGCTGACACTGCAGAAAATCAAGAGGAGAATACTAAAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATG-TTATTTCTAAATAGTTTGACATTTTTTATGAA-------TATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCAACCATCTCTGTCAAAGGTGTTTGGGTGCTCTTTGATGCAGGCATATGTGTGTGTTCTTAATACATAGATTTCCCCTCATTATTTCCCTGNNTAT-CCGGNTATCTGTTGTATTCTGTGCACCACTACATCTAACATGTGTACATATTTATATATATACTACTGATGATTATGTTAGTAGCTTAGCTCTTCGTTCTCTTTTTATAATCACAAGTTTCACACACAATACTACTATTTTCTTTTCGATATATATACATATTACCATTAGTAACAATCAGTACAGATAAGTATGTCGCGCGTATCGCTAAATATAACTATATTCACACTATTAAATATTATAGTCAACTCACTTTACGTTTGAGAACAACTTTATCAAAGAAGAAATGTTATCTGGTCTATTTTTCAGTTTTAATTGCAGATTAGTTTTTCTGCGTTTTCATTTCCCGTTTCTTTTTATACATATATATCTATGTAATTTGTTGATATTTCAACTGAAAAGATTATTAATCTATACTATTACCAATGTTATTTGATAAATGCACAT]
[-] EMBL CD122811 [GGCTGATAGCTATGTCANAATTTCTGTCTTGCGATTATATATGTCAACTAGATCTTGTCTACTCATTTCTCCTCCATGCAATGAAAAGCCTTGTGTAACTTTTTGTTTCTAGTTAAATGAAGGAATGGCAGCGTCTGAAGTCACGAGTCCAACGAACATCCAAGATGATTTAAAAAATGAAAGTTTAGAAGCTACTGTATCTCTGGATAAACTCATAATGGGAGGCGCACCAAAGTCATCGGGATCACTGTCTGCTAGTGATGATCATGTGCCTTCCACAACTTACGTTACAATCCATCTCCCGGACGGGACCCAGGGATCAACTCTGAGTCAACAAAAATTGCAGGAACTTATCATGCACCTGTCCCAGTCTGGTCAGATTCAGCTACGAGAAGATAGCAAGATTGTAATAGATCTTAAATTCACTGGTAAGTCGGGCGACCAAGGGGCTCAAACAAAATTGGAAAATTCTTCGCTCCAACACTCTGCTGTGTCTAGTTGTACGGCATCACAAATACAAACCAT ]
[-] EMBL CD159276 [ AATGAAGGAATGNCAGCGTCTGAAGTCACGAGTCCANCGAACATCCAAGATGATTTAAGAAATGAAAGTTTAGAAGCTACTGTATCTCTGGATAAACTCATAATGGGAGGCGCACCAAAGTCATCGGGATCACTGTCTGCTAGTGATGATCATGTGCCTTCCACAACTTACGTTACAATCCATCTCCCGGACGGGACCCAGGGATCAACTCTGAGTCAACAAAAATTGCAGGAACTTATCATGCACCTGTCCCAGTCTGGTCAGATTCAGCTACGAGAAGATAGCAAGATTGTAATAGATCTTAAATTCACTGGTAAGTCGGGCGACCAAGGGGCTCAAACAAAATTGGAAAATTCTTCGCTCCAACACTCTGCTGTGTCTAGTTGTACGGCATCACAAATACAAACCATAGCTTCCAGCAACCCTCATCGTGTTTTACAGGTTGGCAGCCCGGGTTCCGATGGAGTTCAAATTGTACGCACTATACCTTCTTTTGTCAGTTCTACTACTCAAATAATTTCATTTCCAACTGTTGCAACACAACAACCAGTCG ]
[+] EMBL AF158103 [ TGTCTGCTAGTGATGATCATGTGCCTTCCACAACTTACGTTACAATCCATCTCCCGGACGGGACCCAGGGATCAACTCTGAGTCAACAAAAATTGCAGGAACTTATCATGCACCTGT CCAGTCTGGTCAGATTCAGCTACGAGAAGATAGCAAGATTGTAATAGATCTTAAATTCACTGGTAAGTCGGGCGACCAAGGGGCTCAAACAAAATTGGAAAATTCTTCGCTCCAACACTCTGCTGTGTCTAGTTGTACGGCATCACAAATACAAACCATAGCTTCCAGCAACCCTCATCGTGTTTTACAGGTTGGCAGCCCGGGTTCCGATGGAGTTCAAATTGTACGCACTATACCTTCTTTTGTCAGTTCTACTACTCAAATAATTTCATTTCCAACTGTTGCAACACAACAACCAGTCGCAGCCCAGTCAAGCAATCCTAGACAACAAATTCAGCAACAACCTACTTACATTCTAGTCCCAGCAGCTCAGCTAGCAAGTGGTGGAGAGAATCAAGTGTTTGCAAGCACACCTATACGTGCTGTTACAGCAGGACACACAATGCTTCGTACTTCTGGAATAGGTATTAACAATAATCAAACTGTTAACACAAGCAGTGTTAATTTAAGTTCAGCTGATCGAAGTATTATTCTAGTACAACAACCAGTTGCTGGAACTAGTATTCACGTTTGTTCTACAGGTACAATCGTTCCTGGTTCAAGTAGTGGCAGTGGTACCACTTTAGTTCCTTTACGACAATTAGGCGTATCTACTTGTGGCGGCAATGGATTGGTGTCTAGTGCAGGTTCTACTCGTCTTATCGGATCAAATATTGGTATTGAGTTGTTTTCAAATACAGGCGCAGTTGGATCACGATCGTCTCAAGGTCAAGGGGGTTCAATGGGATTGGTGACAATTTCAGCGAATGCAGGTGTATCTGGGTCTTCATCCTCCGGAACTCCTCAGCGTGAGTCAACTTGGCAGCAATATGTCAAACAGTTCACGAAACTGGGTCCCTGTCCAATCTGTGGGGATAAAATCTCTGGTTATCATTATGGGATATTTTGTTGTGAATCCTGCAAAGGCTTTTTCAAACGGACTGTTCAGAATGCTAAAAGATATGCCTGTCATCGTCCTAATGCTTCTTCTCGATGTGAAATAAATGTAGCTTCACGCAAGAAATGTCCCGCTTGTCGCTTTCTAAAATGCGTAGATAAAGGGATGCGTATTGAAGCTATTCGTTCGGATCGTACACGTGGTGGACGTAGCATGTATCCTGGTTCACGTTATTTGCGTCAAATTGCAGCACGGGTTAGTGGGAATCGCTCTACTTCTGGTCTGGCCATCTCTAGTTCATGTATGGAATTTTCAACTTCAGATCTGGATGGGAATATGCTAGGTGGATTGACGGACCAAAGTATTATGTCAGATGATGCTGATCAACTTTCTTGCTCTGTTGTCGGACTTGCTGCGCATACTTTAGGCCCCGATGGTTTGCCAGCTTCAGAAGACGCGGGTGGTGGTGTTTATCTGGATCCTGGTGTTCTCGGTACTCATGATAATGATGAAGAAGAAATAGATTCTGGTAGTCTGCGTGTTGAACCAAATATTTTAGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCGTTTCGCCGTATTCAGGTAGACAGGTAATTATCGGTGGTTCAAACGAGTCAATTCCACGTACCAGGGAACAACTCCCAAAGATTATTCGGGATATCCTCCTTGTAGAGGAGACCATAGAAGCGGAACCCGAAGATGCATTAGAAATCGATTCTGCGGTTGCGTCAGAAACTGCAGCACCTGAGGGGGTTTCAGATGACGAGGCAGCTGTGTACCGCGCACTGTTGAATTTGGCAGACCCACGTTTATATCGAACAGTGCGTTGGTCTCGAGCACTTCCAGACTTCTCTTTACTCGACACGGACGATCAAATCCTTTTAATACAAAATTGTTGGGCAGACCTACTGTGTCTTGATTGTTGCTGGCGCTCTTTGCCTACTCCTTCGGAAATTCGTCTCACCTCAAGTAAATGTATCAATCTTGAAGCTGCACGTGAAATGGGTGCTGAAGAAATAGTTGAGAGAATTTTACAACTCACTCAATCTTTAACAAGATTACAACTGGATATTGTGGAATATGCATGTTTAAAGGTCATTGTCCTAATGCAAGCAGACTTGAACAATTTAAAAGCAAGTTCTCAAGTTCGATCCTATCAAGAATCTGTTCGACGGCTACTAATGGATTATGTCACCAAGTCGTCACCTGATATAAATGATAAGTTTAACAAATTGATCAATCGAATTCCTGAACTACGCAAAACAAGTCAGGCTGCCCGCTTGATGCTTGTTGATTTGGATCTATCTTCTTATTTATCAACTAATTCTCTTTTAATGGAACTTTTACGCAGTGATATTCAGAGATATACACCAAATAATGGAACAAACAATTCGACAGAATCCACAACAACAGTATCAATGCAAGGTTCTGCCAATTCTGGTTTAAAAACTGTCTCAGTCACTTTAGGGGCTGACACTGCAGAAAATCAAGAGGAGAATACTACAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACGATCACCAGTAATAGTAATAATTCATTGACTACTTCTGGAGTTGATG TTATTTCTAAATAGT ]
[-] EMBL CD187458 [ AAATTGGAAAATTCTTCGCTCCAACACTCTGCTGTGTCTAGTTGTACGGCATCACAAATACAAACCATAGCTTCCAGCAACCCTCATCGTGTTTTACAGGTTGGCAGCCCGGGTTCCGATGGAGTTCAAATTGTACGCACTATACCTTCTTTTGTCAGTTCTACTACTCAAATAATTTCATTTCCAACTGTTGCAACACAACAACCAGTCGCAGCCCAGTCAAGCAATCCTAGACAACAAATTCAGCAACAACCTACTTACATTCTAGTCCCAGCAGCTCAGCTAGC ]
[+] EMBL CD182086 [ CTAGGTGGATTGACGGACCAAAGTATTATGTCAGATGATGCTGATCAACTTTCTTGCTCTGTTGTCGGACTTGCTGCGCATACTTTAGGCCCCGATGGTTTGCCAGCTTCAGAAGACGCGGGTGGTGGTGTTTA ]
[-] EMBL CD124971 [ TAGGTGGATTGACGGACCAAAGTATTATGTCAGATGATGCTGATCAACTTTCTTGCTCTGTTGTCGGACTCGCTGCGCATACTTTAGGCCCCGATGGTTTGCCAGCTTCAGAAGACGCGGGTGGTGGAGTTTATCTGGATCCTGGTGTTCTCGGTACTCATGATAATGATGAAGAAGAAATAGATACTGGTAGTCTGCGTGTTGAACCAAATATTTTAGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCG ]
[-] EMBL CD124966 [ TAGGTGGATTGACGGACCAAAGTATTATGTCAGATGATGCTGATCAACTTTCTTGCTCTGTTGTCGGACTCGCTGCGCATACTTTAGGCCCCGATGGTTTGCCAGCTTCAGAAGACGCGGGTGGTGGAGTTTATCTGGATCCTGGTGTTCTCGGTACTCATGATAATGATGAAGAAGAAATAGATACTGGTAGTCTGCGTGTTGAACCAAATATTTTAGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCG ]
[-] EMBL CD125007 [ TAGGTGGATTGACGGACCAAAGTATTATGTCAGATGATGCTGATCAACTTTCTTGCTCTGTTGTCGGACTCGCTGCGCATACTTTAGGCCCCGATGGTTTGCCAGCTTCAGAAGACGCGGGTGGTGGTGTTTATCTGGATCCTGGTGTTCTCGGTACTCATGATAATGATGAAGAAGAAATAGATACTGGTAGTCTGCGTGTTGAACCAAATATTTTAGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCG ]
[-] EMBL CD164135 [ TCGGTACTCATGATAATGATGAAGAAGAAATAGATTCTGGTAGTCTGCGTGTTGAACCAAATATTTTAGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCG ]
[-] EMBL CD189021 [ ACCCATGATAATGATGAAGAAGAAATAGATTCTGGTAGTCTGCGTGTTGAATCAAATATTTTAGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCGTTTCGCCGTATTCAGGTAGACAGGTAATTATCGGTGGTTCAAACGAGTCAATTCCACGTACCAGGGAACAACTCCCAAAGATTATTCGGGATATCCTCCTTGTAGAGGAGACCATAGAAGCAGAACCCGAAGATGCATTAGAAATCGATTCTGCGGTTGCGTCAGAAACTGCAGCACCTGAGGGGGTTTCAGATGACGAGGCAGCTGTGTACCGCGCACTGTTGAATTTGGCAGACCAACGTTTATATCGAACAGTGCGTTGGTCT ]
[+] EMBL CD078766 [ CCAATTCTGGTTTAAAAACTGTCTCAGTCACTTTAGGGGCTGACACTGCAGAAAATCAAGAGGAGAATACTACAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACGATCACCAGTAATAGTAATAATTCATTGACTACTTCTGGAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAATATTTGTTATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTCAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGTTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCAACCATCTCTGTCAAAGGTGTTTGGGTGCTCTTTGATGCAGGCATATGTGTGTGTTCTTAATACATAGATTTCCCCTCATTATTTCCCTGNNTAT CCGGNTATCTG ]
[+] EMBL CD140692 [ AAAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAA TATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTGTCTTGTTTTCTGGAACTTTGTCAAT ]
[+] EMBL CD140543 [ AAAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAA TATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCAACCATCTCTGTCA ]
[+] EMBL CD140515 [ AAAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAA TATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTGTCTTGTTTTCTGGAACTTTGTCTATAGTTGTGGTTTTTCCAACCATCTCTGTC ]
[+] EMBL CD140548 [ AAAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAA TATTTGTTATTATTATTGTAATGATTAGTAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGCGGTTTTTCCA ]
[+] EMBL CD140696 [ AAAGTCACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAA TATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGTACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCA ]
[-] EMBL CD197154 [ CACAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAGCGATCACCAGTAATAGTAATAATTCATTGACTACTTCTGGAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAATATTTGTTATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATACATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTCAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGTTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCAACTATCTCTGTCAAAGGT ]
[-] EMBL CD197172 [ CAATAGTCCCATCATCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACGATCACCAGTAATAGTAATAATTCATTGACTACTTCTGGAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAATATTTGTTATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGTTTGTCTTGTTTTCTGGGACTTTGTCAATAGTTGTGGTTTTTCCAACCATCTCTGTCAAAGGT ]
[-] EMBL CD197149 [ TCAGGTGTTACTGATTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGAAACGATCACCAGTAATAGTAATAATTCATTGACTACTTCTGGAGTTGATG TTATTTCTAAATAGTTTGACATTTTTTATGAATATTTGTTATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGTTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCAACCATCTCTGTCAAAGGT ]
[-] EMBL CD140567 [ CTAGAGGAAACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATGTTTATTTCTAAATAGTTTGACATTTTTTATGAA TATTTGTTATTATTATTGTAATGATTAATAGCTGGCCATGAATATTTGATTCATACATTGTACTTGTTCTTTCACTGTTTCACGCGCCACATTTGTATAAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTTAACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTGTCTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCAACCATCTCTGTCAAAGGT ]
[-] EMBL CD073226 [ CTTGTTTTCTGGAACTTTGTCAATAGTTGTGGTTTTTCCAACCATCTCTGTCAAAGGTGTTTGGGTGCTCTTTGATGCAGGCATATGTGTGTGTTCTTAATACATAGATTTCCCCTCATTATTTCCCTG TAATCCCGGTTATCTGTTGTATTCTGTGCACCACTACATCTAACATGTGTACATATTTATATATATACTACTGATGATTATGTTAGTAGCTTAGCTCTTCGTTCTCTTTTTATAATCACAAGTTTCACACACAATACTACTATTTTCTTTTCGATATATATACATATTACCATTAGTAACAATCAGTACAGATAAGTATGTCGCGCGTATCGCTAAATATAACTATATTCACACTATTAAATATTATAGTCAACTCACTTTACGTTTGAGAACAACTTTATCAAAGAAGAAATGTTATCTGGTCTATTTTTCAGTTTTAATTGCAGATTAGTTTTTCTGCGTTTTCATTTCCCGTTTCTTTTTATACATATATATCTATGTAATTTGTTGATATTTCAACTGAAAAGATTATTAATCTATACTATTACCAATGTTATTTGATAAATGCACAT]
consensusID : consensus_10834#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 394 fasta sequence
[TTTTTTTTTTTTTTTTTTCCGTAAAACTACTGATAACGCTTTCTTGGTTTCAATGAAAGCTACATTTTTATTCGTACTGCTTTAGTACGAATGCGGAAAAGAAAACAATACTGTTAGAGGTTGCCGAATAAGAAAAACGACAGCCTCTTAAGAAAGATTTTTAGCTCGATAGATTAATTTGGAAACATAAGGATATGGTGAACATTGTTATTTAATAACCTCCGTGAAAGTTTGGAGCCCATCCAGAACCCCAGTTAGGTGTGGCTGGTATGTCAGTAGCAGTAGGGAGTGGCGCAGCATATGAGTAGGGATTTGAAACAAAACCTGACCATGGCTGTACATACTGGGCAACATTTGTCGAGGGCCCATTCAATTGGTTCATGGTACCTCGAGG]
[+] EMBL AI395756 [TTTTTTTTTTTTTTTTTTCCGTAAAACTACTGATAACGCTTTCTTGGTTTCAATGAAAGCTACATTTTTATTCGTACTGCTTTAGTACGAATGCGGAAAAGAAAACAATACTGTTAGAGGTTGCCGAATAAGAAAAACGACAGCCTCTTAAGAAAGATTTTTAGCTCGATAGATTAATTTGGAAACATAAGGATATGGTGAACATTGTTATTTAATAACCTCCGTGAAAGTTTGGAGCCCATCCAGAACCCCAGTTAGGTGTGGCTGGTATGTCAGTAGCAGTAGGGAGTGGCGCAGCATATGAGTAGGGATTTGAAACAAAACCTGACCATGGCTGTACATACTGGGCAACATTTGTCGAGGGCCCATTCAATTGGTTCATGGTACCTCGAGG]
[+] EMBL CD199638 [ TCTTGGTTTCAATGAAAGCTACATTTTTATTCGTACTGCTTTAGTACGAATGCGGAAAAGAAAACAATACTGTTAGAGGTTGCCGAATAAGAAAAACGACAGCCTCTTAAGAAAGATTTTTAGCTCGATAGATTAATTTGGAAACATAAGGATATGGTGAACATTGTTATTTAATAACCTCCGTGAAAGTTTGGAGCCCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10834#0 GGCTGATAGCTATGTCANAATTTCTGTCTTGCGATTATATATGTCAACTAGATCTTGTCT 60
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ACTCATTTCTCCTCCATGCAATGAAAAGCCTTGTGTAACTTTTTGTTTCTAGTTAAATGA 120
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AGGAATGGCAGCGTCTGAAGTCACGAGTCCAACGAACATCCAAGATGATTTAAAAAATGA 180
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AAGTTTAGAAGCTACTGTATCTCTGGATAAACTCATAATGGGAGGCGCACCAAAGTCATC 240
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 GGGATCACTGTCTGCTAGTGATGATCATGTGCCTTCCACAACTTACGTTACAATCCATCT 300
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 CCCGGACGGGACCCAGGGATCAACTCTGAGTCAACAAAAATTGCAGGAACTTATCATGCA 360
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 CCTGTCCCAGTCTGGTCAGATTCAGCTACGAGAAGATAGCAAGATTGTAATAGATCTTAA 420
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ATTCACTGGTAAGTCGGGCGACCAAGGGGCTCAAACAAAATTGGAAAATTCTTCGCTCCA 480
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ACACTCTGCTGTGTCTAGTTGTACGGCATCACAAATACAAACCATAGCTTCCAGCAACCC 540
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TCATCGTGTTTTACAGGTTGGCAGCCCGGGTTCCGATGGAGTTCAAATTGTACGCACTAT 600
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ACCTTCTTTTGTCAGTTCTACTACTCAAATAATTTCATTTCCAACTGTTGCAACACAACA 660
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ACCAGTCGCAGCCCAGTCAAGCAATCCTAGACAACAAATTCAGCAACAACCTACTTACAT 720
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TCTAGTCCCAGCAGCTCAGCTAGCAAGTGGTGGAGAGAATCAAGTGTTTGCAAGCACACC 780
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TATACGTGCTGTTACAGCAGGACACACAATGCTTCGTACTTCTGGAATAGGTATTAACAA 840
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TAATCAAACTGTTAACACAAGCAGTGTTAATTTAAGTTCAGCTGATCGAAGTATTATTCT 900
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AGTACAACAACCAGTTGCTGGAACTAGTATTCACGTTTGTTCTACAGGTACAATCGTTCC 960
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TGGTTCAAGTAGTGGCAGTGGTACCACTTTAGTTCCTTTACGACAATTAGGCGTATCTAC 1020
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TTGTGGCGGCAATGGATTGGTGTCTAGTGCAGGTTCTACTCGTCTTATCGGATCAAATAT 1080
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TGGTATTGAGTTGTTTTCAAATACAGGCGCAGTTGGATCACGATCGTCTCAAGGTCAAGG 1140
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 GGGTTCAATGGGATTGGTGACAATTTCAGCGAATGCAGGTGTATCTGGGTCTTCATCCTC 1200
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 CGGAACTCCTCAGCGTGAGTCAACTTGGCAGCAATATGTCAAACAGTTCACGAAACTGGG 1260
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TCCCTGTCCAATCTGTGGGGATAAAATCTCTGGTTATCATTATGGGATATTTTGTTGTGA 1320
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ATCCTGCAAAGGCTTTTTCAAACGGACTGTTCAGAATGCTAAAAGATATGCCTGTCATCG 1380
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TCCTAATGCTTCTTCTCGATGTGAAATAAATGTAGCTTCACGCAAGAAATGTCCCGCTTG 1440
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TCGCTTTCTAAAATGCGTAGATAAAGGGATGCGTATTGAAGCTATTCGTTCGGATCGTAC 1500
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ACGTGGTGGACGTAGCATGTATCCTGGTTCACGTTATTTGCGTCAAATTGCAGCACGGGT 1560
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TAGTGGGAATCGCTCTACTTCTGGTCTGGCCATCTCTAGTTCATGTATGGAATTTTCAAC 1620
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TTCAGATCTGGATGGGAATATGCTAGGTGGATTGACGGACCAAAGTATTATGTCAGATGA 1680
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TGCTGATCAACTTTCTTGCTCTGTTGTCGGACTCGCTGCGCATACTTTAGGCCCCGATGG 1740
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TTTGCCAGCTTCAGAAGACGCGGGTGGTGGTGTTTATCTGGATCCTGGTGTTCTCGGTAC 1800
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TCATGATAATGATGAAGAAGAAATAGATTCTGGTAGTCTGCGTGTTGAACCAAATATTTT 1860
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AGAATGTGGAAGCGGAATTGTTGGTGGTACTAATCTCTCAACAAATGTCGTTTCGCCGTA 1920
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TTCAGGTAGACAGGTAATTATCGGTGGTTCAAACGAGTCAATTCCACGTACCAGGGAACA 1980
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ACTCCCAAAGATTATTCGGGATATCCTCCTTGTAGAGGAGACCATAGAAGCGGAACCCGA 2040
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AGATGCATTAGAAATCGATTCTGCGGTTGCGTCAGAAACTGCAGCACCTGAGGGGGTTTC 2100
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AGATGACGAGGCAGCTGTGTACCGCGCACTGTTGAATTTGGCAGACCCACGTTTATATCG 2160
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AACAGTGCGTTGGTCTCGAGCACTTCCAGACTTCTCTTTACTCGACACGGACGATCAAAT 2220
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 CCTTTTAATACAAAATTGTTGGGCAGACCTACTGTGTCTTGATTGTTGCTGGCGCTCTTT 2280
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 GCCTACTCCTTCGGAAATTCGTCTCACCTCAAGTAAATGTATCAATCTTGAAGCTGCACG 2340
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TGAAATGGGTGCTGAAGAAATAGTTGAGAGAATTTTACAACTCACTCAATCTTTAACAAG 2400
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ATTACAACTGGATATTGTGGAATATGCATGTTTAAAGGTCATTGTCCTAATGCAAGCAGA 2460
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 CTTGAACAATTTAAAAGCAAGTTCTCAAGTTCGATCCTATCAAGAATCTGTTCGACGGCT 2520
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ACTAATGGATTATGTCACCAAGTCGTCACCTGATATAAATGATAAGTTTAACAAATTGAT 2580
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 CAATCGAATTCCTGAACTACGCAAAACAAGTCAGGCTGCCCGCTTGATGCTTGTTGATTT 2640
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 GGATCTATCTTCTTATTTATCAACTAATTCTCTTTTAATGGAACTTTTACGCAGTGATAT 2700
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TCAGAGATATACACCAAATAATGGAACAAACAATTCGACAGAATCCACAACAACAGTATC 2760
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AATGCAAGGTTCTGCCAATTCTGGTTTAAAAACTGTCTCAGTCACTTTAGGGGCTGACAC 2820
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TGCAGAAAATCAAGAGGAGAATACTAAAGTCACAATAGTCCCATCATCAGGTGTTACTGA 2880
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TTTATTATCACTACCTAATCATACTACTATTACAACAGTAACAGAGAGTAGACTAGATGA 2940
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AACAATCACCAGTAATAGTAATAATTCATTGACTACTTCTGAAGTTGATGTTATTTCTAA 3000
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ATAGTTTGACATTTTTTATGAATATTTGTTATTATTATTGTAATGATTAATAGCTGGCCA 3060
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TGAATATTTGATTCATACATTGTACTTGTTTTTTCACTGTTTCACGCGCCACATTTGTAT 3120
consensus_10834#1 ----------TTTTTTTTTTTTTTTTTTCCGTAAAACTACTGATAACGCTTTCTTGGTTT 50
** * ** * ** * *** * *** ** ** *
consensus_10834#0 AAATGGCACTTACAATTTTATTGCTAATATCTTCGTTAGTATACATACTAGCACAGATTT 3180
consensus_10834#1 CAATGAAAGCTACATTTTTATTCGTACTGCTTTAGTACGAATGCGGAAAAGAAAACAAT- 109
**** * **** ******* ** * ** ** * ** * * ** * * * *
consensus_10834#0 AACTGTAAATACTTTCCATTTTGGTAAATAACTGTACTTTTCCAAATATTCCTCTGCTTG 3240
consensus_10834#1 -ACTGTTAGAGGTTGCCGAATAAGAAAAACGACAGCCTCTTAAGAAAGATTTTTAGCTCG 168
***** * ** ** * * *** ** ** ** * * *** *
consensus_10834#0 TCTTGTTT-TCTGGAACTTTGTCAATA--GTTGTGGTTTTT--CCAACCATCTCTGTCAA 3295
consensus_10834#1 ATAGATTAATTTGGAAACATAAGGATATGGTGAACATTGTTATTTAATAACCTCCGTGAA 228
** * ***** * *** ** ** ** ** * *** ** **
consensus_10834#0 AGGTGTTTGGGTGCTCTTTGATGCAGGCATATGTGTGTGTTCTTAATACATAGATTTCCC 3355
consensus_10834#1 AG----TTTGGAGCCCATCCAG--AACCCCAGTTAGGTGTGGCTGGTATGTCAGTAGCAG 282
** ** ** ** * * * * * * * **** * ** * * *
consensus_10834#0 CTCATTATTTCCCTGNNTATCCGGNTATCTGTTGTATTCTGTGCACCACTACATCTAACA 3415
consensus_10834#1 TAGGGAGTGGCGCAGCATAT--GAGTAGGGATTTGAAACAAAACCTGACCATGGCT---G 337
* * * * *** * ** ** * * * ** * **
consensus_10834#0 TGTGTACATATTTATATATATACTACTGATGATTATGTTAGTAGCTTAGCTCTTCGTTCT 3475
consensus_10834#1 TACATACTGGGCAACATTTGT-CGAGGGCCCATTCAATTGGTT-CATGGTACCTCGAGG- 394
* *** * ** * * * * * *** ** ** * * * * ***
consensus_10834#0 CTTTTTATAATCACAAGTTTCACACACAATACTACTATTTTCTTTTCGATATATATACAT 3535
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 ATTACCATTAGTAACAATCAGTACAGATAAGTATGTCGCGCGTATCGCTAAATATAACTA 3595
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 TATTCACACTATTAAATATTATAGTCAACTCACTTTACGTTTGAGAACAACTTTATCAAA 3655
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 GAAGAAATGTTATCTGGTCTATTTTTCAGTTTTAATTGCAGATTAGTTTTTCTGCGTTTT 3715
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 CATTTCCCGTTTCTTTTTATACATATATATCTATGTAATTTGTTGATATTTCAACTGAAA 3775
consensus_10834#1 ------------------------------------------------------------
consensus_10834#0 AGATTATTAATCTATACTATTACCAATGTTATTTGATAAATGCACAT 3822
consensus_10834#1 -----------------------------------------------
|
| Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||