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Schistosoma mansoni
cluster # 10852 cluster # 10852       Sequences # 23       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10852#0 length = 643 sequences # 16  
consensus_10852#1 length = 605 sequences # 7  

consensusID : consensus_10852#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 643
fasta sequence
                              [ATATTAAAAATAAATTACTACTACTCAGATTTTGGTTTGAAGGAAGGGTTAGGCTGTTATTACNGCATGCTTTTTTTCTATCAT-GGAGTATGATAAC-GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA-GGGATTGT-TGGACGCC-T-TTTTTGGTTTCCTTT-CCAGAC-GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAAACAGAAACAAAACCACTTGAGAAAAGTGACCTGCCTAAACCAATCAAAGTTGGTTCTTCTCCTGATGATGAGGAAGAAGAGGAA-GACAGGGGAAAATTGANACCGAATGAAGGAAATGGTGCAGATCTGCCAAATTATAGCTGGACCCAGACACTGAGCGATGTTGATATAAGAATACCGACACGCTTACCCCATACCATC]

[+] EMBL CD186086             [ATATTAAAAATAAATTACTACTACTCAGATTTTGGTTTGAAGGAAGGGTTAGGCTGTTATTACTACCTGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAAACAGAAACAAAACCACTTGAGAAAAGTGACCTGCCTAAACCAATCAAAGTTGGTTCTTCTCCTGATGATGAGGAAGAAGAGGAA GACAGGGGGAAATTGANACCGAATGAAGGAAATGGTGCAGATCTGCCAAAT                                                                  ]
[-] EMBL CD196263             [                                                               NGCATGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCCTT TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAAACAG                                                                                                                                                                                                      ]
[-] EMBL CD196340             [                                                               NGCATGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAAACAG                                                                                                                                                                                                      ]
[-] EMBL CD196299             [                                                                GCATGC TTTTTTCTATCAT GGAGTATGATACN GTTTTCCTGAGTGTNGCACAAAGCTGTGACAAT GAGTACANNGGATTGT TNGACG C T TTNNTGG TTCCTTTNCCAGAC GACNAGA TTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTNTAGTTCTTGAGAATTTTACAAAACANCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAAACAGAAACAAAACCACTTGAGAAAAGTGACCTGCCTAAACCAATCAAAGTTGGTTCTTCTCCTGATGATGAGGAA                                                                                                                               ]
[-] EMBL CD140271             [                                                               cGCACGCTTTTTCTCTATCAT GGAGTATGA AACGGTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCACGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGA ACGTCCACACTGCCACAAACAG                                                                                                                                                                                                      ]
[+] EMBL CD140163             [                                                                  ATGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCACGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAAACA                                                                                                                                                                                                       ]
[+] EMBL CD140249             [                                                                  ATGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCACGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCNAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGA                                                                                                                                                                                                                                         ]
[+] EMBL CD140266             [                                                                  ATGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTCTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCACGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATA                                                                                                                                                                                                                                                            ]
[+] EMBL CD140165             [                                                                  ATGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTGGTTCTTGAGAATTTTACAAAACACCACGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATA                                                                                                                                                                                                                                                            ]
[+] EMBL CD140226             [                                                                  ATGCTTTTTTTCTATCAT GGAGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCACGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATA                                                                                                                                                                                                                                                            ]
[-] EMBL CD196321             [                                                                   TGCTTNTTTCNTATCAT GGAGTATGATAAC GTTNTCCTGAGTGTGNCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAA                                                                                                                                                                                                                                                           ]
[-] EMBL CD196306             [                                                                     tgcTTTTTCTATCATGGGAGTATGATAAC GTTTTCCTGAGTGTTGCACANAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTNTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAAACAG                                                                                                                                                                                                      ]
[+] EMBL CD133900             [                                                                                       AGTATGATAAC GTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACA GGGATTGT TGGACGCC T TTTTTGGTTTCCTTT CCAGAC GAACAGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAA                                                                                                                                                                                                                                                                                ]
[-] EMBL CD135731             [                                                                                                                                               GATTGTCTGGACGCC TCATTTTGGTTTCCTTT CCAGTCTGAACAGATTTGTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTACAATACATCGCGATGGTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATGACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAGAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAA                                                                                                                                                                                                                                     ]
[+] EMBL CD182683             [                                                                                                                                                                                                                                           TTGAGAATTTTACAAAACACCACGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACTACCACAGACAGAAACAAAACCACTTGAGAAAAGTGACCTGCCTAAACCAATCAAAGTTGGTTCTTCTCCTGATGATGAGGAAGAAGAGGAAGGGCA GGGANAATTGANACCGAATGAAGGAAGTGGTGC                                                                               ]
[-] EMBL CD192506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGAAACAAAACCACTTGAGAAAAGTGACCTGCCTAAACCAATCAAAGTTGGTTCTTCTCCTGATGATGAGGAAGAAGAGGAA GATAAGGGAAAATTGTAACCGAATGAAGGAAATGGTGCAGATCTGCCAAATTATAGCTGGACCCAGACACTGAGCGATGTTGATATAAGAATACCGACACGCTTACCCCATACCATC]


>consensus_10852#0 ATATTAAAAATAAATTACTACTACTCAGATTTTGGTTTGAAGGAAGGGTTAGGCTGTTAT TACNGCATGCTTTTTTTCTATCATGGAGTATGATAACGTTTTCCTGAGTGTTGCACAAAG CTGTGACAATGGAGTACAGGGATTGTTGGACGCCTTTTTTGGTTTCCTTTCCAGACGAAC AGATTTTTATTATGGAGCTACTGAAAAAGACGCGAAACGTTTAGTTCTTGAGAATTTTAC AAAACACCGCGATGCTGCCTTAGCACGTCGTGAAGAAGAGAAGAAAGAATTACATGAGCG AGAGGAACGCGAACGTAAACGAAGAGAAGAAAAAAAGAAAGAAGCCATTATGGCGAATCT TGCCCCTCCAAAGGACTTAAGCAAAACTGATAATTTAAATGGCACAAGTGAGGAACTGTC AGATACGTCCACACTACCACAAACAGAAACAAAACCACTTGAGAAAAGTGACCTGCCTAA ACCAATCAAAGTTGGTTCTTCTCCTGATGATGAGGAAGAAGAGGAAGACAGGGGAAAATT GANACCGAATGAAGGAAATGGTGCAGATCTGCCAAATTATAGCTGGACCCAGACACTGAG CGATGTTGATATAAGAATACCGACACGCTTACCCCATACCATC



consensusID : consensus_10852#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 605
fasta sequence
                              [CACCGTGAGATATAGAAACCGAATGAAGG-AAATGGTGCAGATCTGCCAAATTATAGCTGGACCCAGACACTGAGCGATGTTGATATAAAAATACCGACACGCTTACCCCATACCATCAAATCCCGCGATGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATCGTGAACCAATTTTATCAGGGAATTTGTATAATGAAGTTAAGACTGAAGAATGTGTATGGAGTCTTGTGGATGGTATCACGATACTCGTCCACTTAGAGAAAACCAACAAAATGGAATGGTGGAGTCGTATCTGTGATGGTGAACCGGAAATGAATACACGTAAAGTTCAACCGGAAAATTCCAAACTCTCTGATTTAGACGGTG-AAACTCGATCTATGGTTGAAAAAATGATGTATGACCAACGTCAAAAAGAGCTTGGTCTGCCAACATCCGAAGATCAGAAGAACCAAGAAATGTTGAAAAAGTTTATGGCTGGTCATCCAGAAATGGGTTTTTCCAAATGTAAATTTTCTTAAGTTTATGTTAATTTGAAATGCTGAAGAAACACAATCTTTTTGGTATTATTATATGATCAAAAAAGAAACTT]

[+] EMBL CD152111             [CACCGTGAGATATAGAAACCGAATGAAGG AAATGGTGCAGATCTGCCAAATTATAGCTGGACCCAGACACTGAGCGATGTTGATATAAAAATACCGACACGCTTACCCCATACCATCAAATCCCGCGATGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATCGTGAACCAATTTTATCAGGGAATTTGTATAATGAAGTTAAGACTGAAGAATGTGTATGGAGTCTTGTGGATGGTATCACGATACTCGTCCACTTAGAGAAAACCAACAAAATGGAATGGTGGAGTCGTATCTGTGATGGTGAACCGGAAATGAATACACGTAAAGTTCAACCGGAAAATTCCAAACTCTCTGATTCAGACGGTG AAACTCGATCTATGGTTGAAAAAATGATGTATGACCAACGTCAAAAAGAGCTTGGTCTGCCAACA                                                                                                                                                              ]
[+] EMBL CD152076             [                         AAGGTAAATGGTGCAGATCTGCCAAATTATAGCTGGACCCAGACACTGAGCGATGTTGATATAAAAATACCGACACGCTTACCCCATACCATCAAATCCCGCGATGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATCGTGAACCAATTTTATCAGGGAATTTGTATAATGAAGTTAAGACTGAAGAATGTGTATGGAGTCTTGTGGATGGTATCACGATACTCGTCCACTTAGAGAAAA CAACAna                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CD193513             [                                        GATCTGCCAAATTATAGCTGGACCCAGACACTGAGCGATGTTGATATAAAAATACCGACACGCTTACCCCATACCATCAAATCCCGCGATGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATCGTGAACCAATTTTATCAGGGAATTTGTATAATGAAGTTAAGACTGAAGAATGTGTATGGAGTCTTGTGGATGGTATCACGATACTCGTCCACTTAGAGAAAACCAACAAAATGGAATGGTGGAGTCGTATCTGTGATGGTGAACCGG                                                                                                                                                                                                                                                                                         ]
[+] EMBL AA960701             [                                             GCCAAATTATAGCTGGACCCAGACACTGAGCGATGTTGATATAAAAATACCGACACGCTTACCCCATACCATCAAATCCCGCGATGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATCGTGAACCAATTTTATCAGGGAATTTGTAT ATGAAGTTAAGACTGAAGAATGTGTATGGAGTCTTGTGGATGGTATCACGATACTCGTCCACTTAGAGAAAACCAACAAAATGGAATGGTGGAGTCGTATCTGTGATGGTGAACCGGAAATGA                                                                                                                                                                                                                                                                                   ]
[-] EMBL CD132122             [                                                                                                           CCCATACCATCAAATCCCGCGAGGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATCGTGAACCAATTTTATCAGGGAATTTGTATAATGAAGTTAAGACTGAAGAATGTGTATGGAGTCTTGTGGATGGTATCACGATACCCGTCCACTTAGAGAAAACCAACAAAATGGAATGGTGGAGTCGTATCTGTGATGGTGAACCGGAAATGAATACACGTAAAGTTCAACCGGAAAATTCCAAACTCTCTGATTTAGACGGTG AAACTCGATCTATGGTTGAAAAAATGATGTATGACCAACGTCAAAAAGAGCTTGGTCTGCCAACA                                                                                                                                                              ]
[-] EMBL AI976194             [                                                                                                                                                                                                              ATAATTTAGTTAAGACTGAAGAATGTGTATGGAGTCTTGTGGATGGTATCACCATACTCGTCCACTTAGAGAAAACCAGCAAAATGGAATGGTGGAGTCGTATCTGTGATGGTGAACCGGTAATGAATACGCGTCAAGTTCAACCGGAAAATTCCCAACTCTCTGATTTAGTCGGTG AAACTCGATGTATGGTTGAAAAAATAATGTATGACCAACGTCAAAAAAAGCTTGGTCTGCCAACATCCGAAGATCAGAAGAACCAAGAAATGTTGAAAAAGTTTATGGCTGGTCATCCAGAAATGGGTTTTTCCAAATGTAAATTTTCTTAAGTTTATGTTAATTTGAAATGCTGAAGAAACACAATCTTTTTGGTATTATTATATGATCAAAAAAGAAAC  ]
[+] EMBL AA559453             [                                                                                                                                                                                                                                                                                                                                     aAAATGAATACACGTAAAGTTCAACCGGAAAATTCCAAACTCTCTGATTTAGACGGTGNAAACTCGATCTATGGTTGAAAAAATGATGTATGACCAACGTCAAAAAGAGCTTGGTCTGCCAACATCCGAAGATCAGAAGAAACAAGAAATGTTGAAAAAGTTTATGGCTGCTCATCCAGAAATGGATTTTTCCAAATGTAAATTTTCTTAAGTTTATGTTAATTTGAACTGCTGAAGAAACACAATCTTTTTGGTATTATTATATGATCAAAAAAGAAACTT]


>consensus_10852#1 CACCGTGAGATATAGAAACCGAATGAAGGAAATGGTGCAGATCTGCCAAATTATAGCTGG ACCCAGACACTGAGCGATGTTGATATAAAAATACCGACACGCTTACCCCATACCATCAAA TCCCGCGATGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATCGT GAACCAATTTTATCAGGGAATTTGTATAATGAAGTTAAGACTGAAGAATGTGTATGGAGT CTTGTGGATGGTATCACGATACTCGTCCACTTAGAGAAAACCAACAAAATGGAATGGTGG AGTCGTATCTGTGATGGTGAACCGGAAATGAATACACGTAAAGTTCAACCGGAAAATTCC AAACTCTCTGATTTAGACGGTGAAACTCGATCTATGGTTGAAAAAATGATGTATGACCAA CGTCAAAAAGAGCTTGGTCTGCCAACATCCGAAGATCAGAAGAACCAAGAAATGTTGAAA AAGTTTATGGCTGGTCATCCAGAAATGGGTTTTTCCAAATGTAAATTTTCTTAAGTTTAT GTTAATTTGAAATGCTGAAGAAACACAATCTTTTTGGTATTATTATATGATCAAAAAAGA AACTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10852#0      ----------------------ATATTAAAAATAAATTACTACTACTCAGATTTTGGTTT 38
consensus_10852#1      CACCGTGAGATATAGAAACCGAATGAAGGAAATGGTGCAGATCTGC-CAAATTATAGCTG 59
                                             **     ****     *   ** * ** *** * * * 

consensus_10852#0      GAAGGAAGGGTTAGGC--TGTTATTACNGCATGCTTTTTTTCTATCATGGAGTATGATAA 96
consensus_10852#1      GACCCAGACACTGAGCGATGTTGATATAAAA-ATACCGACACGCTTACCCCATACCATCA 118
                       **   *     *  **  ****  **    *          *  * *     **  ** *

consensus_10852#0      CGTTTTCCTGAGTGTTGCACAAAGCTGTGACAATGGAGTACAGGGATTGTTGGACGCCTT 156
consensus_10852#1      AATCCCGCGATGTCTATGTTGAAATTGCCAAAAAGCATATCAAAATTGGCTTAAAGAATC 178
                         *    *   ** *      **  **  * ** * *   **    * * *  * *  * 

consensus_10852#0      TTTTGGTTTCCTTTCCAGACGAACAGATTTTTATTATGGAGCTA---CTGAAAAAGACGC 213
consensus_10852#1      GTGAACCAATTTTATCAGG-----GAATTTGTATAATGAAGTTAAGACTGAAGAATGTGT 233
                        *         **  ***        **** *** *** ** **   ***** **   * 

consensus_10852#0      GAAACGTTTAGTTCTTGAGAATTTTACAAAACACCGCGATGCTGCCTTAGCACGTCGTGA 273
consensus_10852#1      ATGGAGTCTTGTG---GATGGTATCACGATACTCGTCCACTTAG----AGAAAACCAACA 286
                            ** * **    **   * * ** * ** *  * *    *    ** *   *   *

consensus_10852#0      AGAAGAGAAGAAAGAATTACATGAGCGAGAGGAACGCGAACGTAAACGAA-GAGAAGAAA 332
consensus_10852#1      AAATGGAATGGTGGAGTCGTATCTGTGATGGTGAACCGGAAATGAATACACGTAAAGTTC 346
                       * * *  * *   ** *   **  * **  *  *  ** *  * **   * *  ***   

consensus_10852#0      AAAAGAAAGAAGCCATTATGGCGAATCTTGCCCCTCCAAA--GGACTTAAGCAAAACTGA 390
consensus_10852#1      AACCGGAAAATTCCAAACTCTCTGATTTAGACGGTGAAACTCGATCTATGGTTGAAAAAA 406
                       **  * ** *  ***   *  *  ** * * *  *  **   *  **   *   **   *

consensus_10852#0      TAATTTAAATGGCACAAGTGAGGAACTGTCAGATACGTCCACACT--ACCACAAACAGAA 448
consensus_10852#1      TGATGT--ATGACCAACGTCAAAAAGAGCTTGGTCTGCCAACATCCGAAGATCAGAAGAA 464
                       * ** *  *** *  * ** *  **  *   * *  * * ***    *  *  *  ****

consensus_10852#0      ACAAAACCACTTGAGAAAAGTGACCTGCCTAAACCAATCAAAGTTGGTTCTTCTCCTGAT 508
consensus_10852#1      CCAAGAAATGTTGAAAAAGTTTA--TGGCTGG-TCATCCAGAAATGGGT-TTTTCCAAAT 520
                        *** *    **** ***  * *  ** **    **  ** *  *** * ** ***  **

consensus_10852#0      GATGAGGAAGAAGAGGAAGACAGGGGAAAATTGANACCGAATGAAGGAAATGGTGCAGAT 568
consensus_10852#1      GT----AAATTTTCTTAAGTTTATGTTAATTTGAAAT--GCTGAAGAAACACAATCTTTT 574
                       *      **       ***     *  ** **** *     ***** **      *   *

consensus_10852#0      CTGCCAAATTATA-GCTGGACCCAGACACTGAGCGATGTTGATATAAGAATACCGACACG 627
consensus_10852#1      TGGTATTATTATATGATCAAAAAAGAAACTT----------------------------- 605
                         *    ****** * *  *   *** ***                              

consensus_10852#0      CTTACCCCATACCATC 643
consensus_10852#1      ----------------
                                       




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)