These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10860#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 828 fasta sequence [TAGGAATATGAATATACATATAATATAGTTACTTAGCAGTTGTTTAATAAGAATACATGTATAATAACAGGAGCTGTTATAGGCTTGTGAAAAGCTTAGACCATTAGAAAACCCAAATCTTTGTTGTTTCAGTGTTAAATCTGTTCTGACAAATTTTCATTGGTATGTGCTTTCTGAGCTAATTGCCTCAACGGTACTTATGGTTTGGATTACTTTTTATGGTTAGGATTTTCTTTTAGCGAGTTAGTTTTGTACGGGATGGGGTCACTAACCACATGCCCAACCCTCCTCTTGTATCCGGGCTTGGGACCGGCAGTAGCCTCTGGAGGAGCTCCAGGCGGAGTTAATTGCCTCAACAGTGCAGACTAAATATGTTTGAACTGTGATCATCAGTGGGATCTAGGAATCATATTCTACCTTTAACTTCGAAAGCCAACCCTGTCTTATCTAGTAACTAAGTCTAAATATATATTTTGATATTACAGACAATAAATAGTAACGCATGACAGTTATTAACTGATCAATGACATATCTTGAGCAATAACTTGATAAATATATAATTTTCAGATTATATTGCACACTGATCTTAGCTAAATAACCATTGAAAATCAGAAAGCACTGGACACTTACTTCGTCTTATAATGAGACCTCTCAGAAGTGAGAACTCACAATCAATCCAAGGATTGAACCCAGGACATTTAAGTCTCAATACTAGAGTTTAACC-TTTAGATAACTGAATCAGCATCTATTGATGTATAATTTTCTCTGTAAATCTCTCTGAAGTATTACCCGAT-TTGTACTTTAACATGAAAT-C-ATAGATGATATTGA] [+] EMBL CD080623 [TAGGAATATGAATATACATATAATATAGTTACTTAGCAGTTGTTTAATAAGAATACATGTATAATAACAGGAGCTGTTATAGGCTTGTGAAAAGCTTAGACCATTAGAAAACCCAAATCTTTGTTGTTTCAGTGTTAAATCTGTTCTGACAAATTTTCATTGGTATGTGCTTTCTGAGCTAATTGCCTCAACGGTACTTATGGTTTGGATTACTTTTTATGGTTAGGATTTTCTTTTAGCGAGTTAGTTTTGTACGGGATGGGGTCACTAACCACATGCCCAACCCTCCTCTTGTATCCGGGCTTGGGACCGGCAGTAGCCTCTGGAGGAGCTCCAGGCGGAGTTAATTGCCTCAACAGTGCAGACTAAATATGTTTGAACTGTGATCATCAGTGGGATCTAGGAATCATATTCTACCTTTAACTTCGAAAGCCAACCCTGTCTTATCTAGTAACTAAGTCTAAATATATATTTTGATATTACAGACAATAAATAGTAACGCATGACAGTTATTAACTGATCAATGACATATCTTGAGCAATAACTTGATAAATATATAATTTTCAGATTATATTGCACACTGATCTTAGCTAAATAACCATTGAAAATCAGAAAGCACTGGACACTTACTTCGTCTTATAATGAGACCTCTCAGAAGTGAGAACTCACAATCAATCCAAGGATTGAACCCAGGACATTTAAGTCTCAATACTAGAGTTTAACCTTTTAGAT ACTGAATCAGCATCTATTGATGTATAANTNTCTCTGGTAATCTCTCTGAAGTATTACCCGATNNTGTACTT ACATGAANT C ATAGATGATATTG ] [-] EMBL CD074533 [ GCCTCAACGGTACTTATGGTTTGGATTACTTTTTATGGTTAGGATTTTCTTTTAGCGAGTTAGTTTTGTACGGGATGGGGTCACTAACCACATGCCCAACCCTCCTCTTGTATCCGGGCTTGGGACCGGCAGTAGCCTCTGGAGGAGCTCCAGGCGGAGTTAATTGCCTCAACAGTGCAGACTAAATATGTTTGAACTGTGATCATCAGTGGGATCTAGGAATCATATTCTACCTTTAACTTCGAAAGCCAACCCTGTCTTATCTAGTAACTAAGTCTAAATATATATTTTGATATTACAGACAATAAATAGTAACGCATGACAGTTATTAACTGATCAATGACATATCTTGAGCAATAACTTGATAAATATATAATTTTCAGATTATATTGCACACTGATCTTAGCTAAATAACCATTGAAAATCAGAAAGCACTGGACACTTACTTCGTCTTATAATGAGACCTCTCAGAAGTGAGAACTCACAATCAATCCAAGGATTGAACCCAGGACATTTAAGTCTCAATACTAGAGTTTAACC TTTAGATAACTGAATCAGCATCTATTGATGTATAATTTTCTCTGTAAATCTCTCTGAAGTATTACCCGAT TTGTACTTTAACATGAAATAA ATAGATGATATTGA] [-] EMBL CD074557 [ TTTTATGGTTAGGATTTTCTTTTAGCGAGTTAGTTTTGTACGGGATGGGGTCACTAACCACATGCCCAACCCTCCTCTTGTATCCGGGCTTGGGACCGGCAGTAGCCTCTGGAGGAGCTCCAGGCGGAGTTAATTGCCTCAACAGTGCAGACTAAATATGTTTGAACTGTGATCATCAGTGGGATCTAGGAATCATATTCTACCTTTAACTTCGAAAGCCAACCCTGTCTTATCTAGTAACTAAGTCTAAATATATATTTTGATATTACAGACAATAAATAGTAACGCATGACAGTTATTAACTGATCAATGACATATCTTGAGCAATAACTTGATAAATATATAATTTTCAGATTATATTGCACACTGATCTTAGCTAAATAACCATTGAAAATCAGAAAGCACTGGACACTTACTTCGTCTTATAATGAGACCTCTCAGAAGTGAGAACTCACAATCAATCCAAGGATTGAACCCAGGACATTTAAGTCTCAATACTAGAGTTTAACC TTTAGATAACTGAATCAGCATCTATTGATGTATAATTTTCTCTGTAAATCTCTCTGAAGTATTACCCGAT TTGTACTTTAACATGAAAT CAATAGATGATATTGA] consensusID : consensus_10860#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 828 fasta sequence [AGTAGTAGCAGTAGTAGAACTGGAAATTATTGATTGCTGTCTCATTACAATTATTGATCAAACACAATAAAAGCAACTAGGTGGACCTTACTAAACTCATCCCCCGTCATCAGGAGCAGAGGTAAACACCCCATAAATGGCCAAAAGAGGGCAAACTGTTTTCTCTGGTGATGGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGTTTCAACCAACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAACGAGTTTTTCATACATGGCAAAACTCAGGAGGTTATTGATGTTCTTTCGGATATGAACCTTGCGGCACATCAACGTCGTCGACTTCCATACTTGGCGATTACCCTAGCCATTCAACATCGACAAACACAGTGCGAGCTAACATCAGACCTGCTATCAGACATGTGCGGCANAGTCCTCAATCAAGCTCACATTCAACAGGGATTCCAACT] [+] EMBL CD113000 [AGTAGTAGCAGTAGTAGAACTGGAAATTATTGATTGCTGTCTCATTACAATTATTGATCAAACACAATAAAAGCAACTAGGTGGACCTTACTAAACTCATCCCCCGTCATCAGGAGCAGAGGTAAACACCCCATAAATGGCCAAAAGAGGGCAAACTGTTTTCTCTGGTGATGGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACAC ] [-] EMBL CD161844 [ atggtcaAAATAATTGATTGCTGTCTCA TACAATTATTGATCAAACCCAATAAAAGCAACTAGGTGGACCTTACTAAACTCATCCNCCGTCATCAGGAGCAGAGGTAAACACNCCATANATGGCCAAAAGAGGGCAAACTGTTTTCTCTGGTGATGGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGTTTCAACCAACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAACGAGTTTTTCATAC ] [+] EMBL CD162352 [ ATTGCTGTCTCATTACAATTATTGATCAAACACAATAAAAGCAACTAGGTGGACCTTACTAAACTCATCCCCCGTCATCAGGAGCAGAGGTAAACACCCCATAAATGGCCAAAAGAGGGCAAACTGTTTTCTCTGGTGATGGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTCGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGAT ] [+] EMBL CD178288 [ AAAAGCAGCTAGGTGGACCTTACTAAACTCATGCCCCGTCATCAGGAGCTGAGGTAAACACCCCATAAATGGCCAAAAGGGGGCAAACTGTTTTCTCTGGTGATGGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGTTTCAACCAACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAACGAGTTTTTCATACATGGCAAAACTCAGGAGGTTATTGATGTTCTTTCGGATATGAACCTTGCNGCACATCAACG ] [+] EMBL CD111019 [ TACTAAACTCATCCCCCGTCATCAGGAGCAGAGGTAAACACCCCATAAATGGCCAAAAGAGGGCAAACTGTTTTCTCTGGTGATGGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTGGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTTGCAAACGTGGTGGAAGGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTG ] [+] EMBL CD200030 [ CTAAACTCATCCCCCGTCATCAGGAGCAGAGGTAAACACCCCATAAATGGCCAAAAGAGGGCAAACTGTTTACTCTGGTGATAGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGG ] [+] EMBL CD110873 [ CTAAACTCATCCCCCGTCATCAGGAGCAGAGGTAAACACCCCATAAATGGCCAAAAGAGGGCAAACTGTTTTCTCTGGTGATGGAGGTGCTGCAAGCGGCGAAGAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACG ] [+] EMBL CD129890 [ GAGTCAGCAGGGGAAATGATCTGGCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGTTTCAACCAACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAACGAGTTTTTCATACATGGCAAAACTCAGGAGGTTATTGATGTTCTTTCGGATATGAACCTTGCGGCACATCAACGTCGTCGACTTCCATACTTGGCGATTACCCTAGCCATTCAACATCGACAAACACAGTGCGAGCTAACATCAGACCTGCTATCAGAC ] [-] EMBL CD157152 [ GCCGCCACCGTCGTTTGATAAATCCCAGAAATGCCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGTTTCAACCAACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAACGAGTTTTTCATACATGGCAAAACTCAG ] [+] EMBL CD158590 [ CCCCTTAGTGCAACATGGAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGGTCTCACAATTGATGGGGTTCCTTCTGACTTGCATACATTAACGGCTGCACTGCACAAAGTTCAGCTCTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGTTTCAACCAACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAACGAGTTTTTCATACATGGCAAAACTCAGGAGGTTATTGATGTTCTTTCGGATATGAACCTTGCGGCACATCAACGTCGTCGACTTCCATACTTGGCGATTACCCTAGCCATTCAACATCGACAAACACAGTGCGAGCTAACATCAGAACTGCTATCAGACATGTGCGGCANAGTCCTCAATCAAGCTCACATTCAACAGGGATTCCAACT] [+] EMBL CD137773 [ CACGAGATGGGCGCAAATTACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAACTGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGTTTCAACCAACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAACGAGTTTTTCATACATGGCAAAACTCAGGAGGTTATTGATGT ] consensusID : consensus_10860#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 806 fasta sequence [AACATGTATTTTAAAGCTTTCTGTACGAGAGGATGAGCTGACTGAAGAGAAAAAAAAGATGCTCGATATAAATATCAACTTAGATTATACAAATTGTTATACGGTAAATTTGAGTAAAAAGACTATGTTTATAGCTTTCTGTATTCTCAGAATACATAAAAATTATTTGGTTATTCATTTTATTTGCGTGTTAATTCATACACAGCTAATACACAAATAATGGGGAAAGCATATACTGTCTTTGGAATATACTAGAAATTAAAATGGGTGAAAAATAGTTTGGTTTCGTAAAGGAGTAATCATCAAAAGACAATTTGAAACATGTGTTATTTGAGAAAGACATGAATAGATTAATTTTATTTGGCTGGTTCCAGTACATAGCGGATATATGGCACATCAACATCTTTATCATGCTCATCGCTGCAACAGACGTCAAACACCAGGACTTTGACATGGGGAGGTATCTTGCGTTTGTTGACTGCTTCCACCAAATCTCTTAATGACATAGCTAGACGTTCCTTACGCTTTGCCTCTGGCATGAAGAATGCATAGAGCATAGAAACATCTTGCGATAGCATTGTTACATTTAACTTCAAACTATCTTTGAAGTAATCAATTAAACCTTGTAAGGTCATAGGACCTGAAAGTTCGAACCGATCCCATAAAGAAAATTCTGTGTCGTAGTATTTTGATTTGATAGGTGCTACAGGTTCATAAAATGAAGTAAACGGCAATGCTAAATCGACGTAAGCATTTTTGAACAGTTCGAGTTTTTTGTGTCCTAGAACAAGCTTGAATAGTTCTAG] [+] EMBL CD134443 [AACATGTATTTTAAAGCTTTCTGTACGAGAGGATGAGCTGACTGAAGAGAAAAAAAAGATGCTCGATATAAATATCAACTTAGATTATACAAATTGTTATACGGTAAATTTGAGTAAAAAGACTATGTTTATAGCTTTCTGTATTCTCAGAATACATAAAAATTATTTGGTTATTCATTTTATTTGCGTGTTAATTCATACACAGCTAATACACAAATAATGGGGAAAGCATATACTGTCTTTGGAATATACTAGAAATTAAAATGGGTGAAAAATAGTTTGGTTTCGTAAAGGAGTAATCATCAAAAGACAATTTGAAACATGTGTTATTTGAGAAAGACATGAATAGATTAATTT ] [+] EMBL CD137714 [ ATCATCAAAAGACAATTTGAAACATGTGTTATTTGAGAAAGACATGAATAGATTAATTTTATTTGGCTGGTTCCAGTACATAGCGGATATATGGCACATCAACATCTTTATCATGCTCATCGCTGCAACAGACGTCAAACACCAGGACTTTGACATGGGGAGGTATCTTGCGTTTGTTGACTGCTTCCACCAAATCTCTTAATGACATAGCTAGACGTTCCTTACGCTTTGCCTCTGGCATGAAGAATGCATAGAGCATAGAAACATCTTGCGATAGCATTGTTACATTTAACTTCAAACTATCTTTGAAGTAATCAATTAAACCTTGTAAGGTCATAGGACCTGAAAGTTCGAACCGATCCCATAAAGAAAATTCTGTGTCGTAGTATTTTGATTTGATAGGTGCTACAGGTTCATAAAATGAAGTAAACGGCAATGCTAAATCGACGTAAGCATTTTTGAACAGTTCGAGTTTTTTGTGTCCTAGAACAAGCTTGAATAGTTCTAG] consensusID : consensus_10860#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 734 fasta sequence [CGAGCTCGGTACCCGTCTGTGATGAGAGTCTCGACTTCGTGAACGATGAGAATGACGACTATCAGATCGCGATCTGTAAGAGCCAGATCGTGACCTCTGGCCTGGTCGGTCTTCGTAAACACGTAGCCTGCGTCCATAAAGCTCGTAGCCATCAAATTTCTCGATTGCTTCCTTCATATCAGCGTAGGCAGCAAACTCAACAATGCCGTCGTTCTTAGCTGACTTGTGTGCGTCCGCATAAGTAACTTCT-CCAGCCTTACGCATCAAATCTTTGAGATCCTGTAAAAAAGAATAAACAACTGAAAAACCGTGCCCTGTATAATAAGCTAATATATACTACTAATTTGGGTTAAGCTAGCCTAGTACTTAAAAACGCGCGAGTAATTTACCTCGCGTTTTGATCTGACCACAGTACGAGACCACGTTACCACATGCTCGGCCGGACGACCGTTGAACGGCGCGACCAGAAACAACCCTGGGCGACTGACCATGGCATGGAAAACGACCAATCCTACGCGTCCTACGCCACCCGAAACGACCGAACGTCAACGAGCGGTAACTGAATTCGAGATAACAAGCAGTTAGTTACTTCTTGCAGTTCTTACAAACAATCAAACAACAATCCCTTACCTGCCAGCTCACACGCGACGAGAGATTCTCAACAATAACACGATACTCCGTCCTAGTTGGCGGACCGGTACCTGCGNGATTCGCAGAANCCAACGGGGTACCGA] [+] EMBL CD129139 [CGAGCTCGGTACCCGTCTGTGATGAGAGTCTCGACTTCGTGAACGATGAGAATGACGACTATCAGATCGCGATCTGTAAGAGCCAGATCGTGACCTCTGGCCTGGTCGGTCTTCGTAAACACGTAGCCTGCGTCCATAAAGCTCGTAGCCATCAAATTTCTCGATTGCTTCCTT ] [+] EMBL CD129012 [ GAGAGTCTCGACTTCGTGAACGATGAGAATGACGACTATCAGATCGCGATCTGTAAGAGCCAGATCGTGACCTCTGGCCTGGTCGGTCTTCGTAAACACGTAGCCTGCGTCCATAAAGCTCGTAGCCATCAAATTTCTCGATTGCTTCCTTCATATCAGCGTAGGCAGCAAACTCAACAATGCCGTCGTTCTTAGCTGACTTGTGTGCGTCCGCATAAGTAACTTCT CCAGCCTTACGCATCAAATCTTTGAGATCCTGTAAAAAAGAATAAACAACTGAAAAACCGTGCCCTGTATAATAAGCTAATATATACTACTAATTTGGGTTAAGCTAGCCTAGTACTTAAGAACGCGCGAGTAATTTACCTCGCGTTTTGATCTGACCACAGTACGAGACTACGTTACCACATGCTCGGCCGGACGACCGTTGAACGGCGCGACCAGAAACAACCCTGGGCGACTGACCATGGCATGGAAAACGACCAATCCTACGCGTCCTACGCCACCCGAAACGACCGAACGTCAACGAGCGGTAACTGAATTCGAGATAACAAGCAGTTAGTTACTTCTTGCAGTTCTTACAAAC ] [-] EMBL CD167794 [ TAACTTTTCCCAGCCTTACGCATCAAATCTTTGAGATCCTGCAAAAAAGAATAAACAACTGAAAAACCGTGCCCTGTATAATAAGCTAATATATACTACTAATTTGGGTTAAGCTAGCCTAGTACTTAAAAACGCGCGAGTAATTTACCTCGCGTTTTGATCTGACCACAGTACGAGACCACGTTACCACATGCTCGGCCGGACGACCGTTGAACGGCGCGACCAGAAACAACCCTGAGCGACTGACCATGGCATGGAAAACGACCAATCCTACGCGTCCTACGCCACCCGAAACGACCGAACGTCAACGAGCGGTAACTGAATTCGAGATAACAAGCAGTTAGTTACTTCTTGCAGTTCTTACAAACAATCAAACAACAATCCCTTACCTGCCAGCTCACACGCGACGAGAGATTCTCAACAATAACACGATACTCCGTCCTAGTTGGCGGACCGGTACCTGCGNGATTCGCAGAANCCAACGGGGTACCGA] [-] EMBL CD137624 [ GAGATCCTGTAAAAAAGAATAAACAACTGAAAAACCGTGCCCTGTATAAT AGCTAATATATACTACTAATTTGGGTTAAGCTAGCCTAGTACTTAAAAACGCGCGAGTAATTTACCTCGCGTTTTGACCTGACCACAGTACGAGACCACGTTACCACATGCTCGGCCGGACGACCGTTGAACGGCGCGACCAGAAACAACCCTGGGCGACTGACCATGGCATGGAAAACGACCAATCCTACGCGTCCTACGCCACCCGAAACGACCGAACGTCAACGAGCGGTAACTGAATTCGAGATAACAAGCAGTTAGTTACTTCTTGCAGTTCTTACAAACAATCAAACAACAA ] consensusID : consensus_10860#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence [GCCTGCTCGTCTTAACACCACTACCAACTACACCAACTGGCTTCTTCGCTGATACAGCATTACCCTCATCACTCGGATCCGAGTCGGAACTCGACGACGCAGGCTTCCCTACCACCTTCTTACCACCAACAGCCACACCGCTAACAGCCTTACTCACAGATGGAGACGCCTTCACCAACGCAGGCTTCTTACTCGCCGGCTGCTCGTCATCACTAGAATCTGAGTCCGAACTCGACGAAGCGGCCGCAGCTTTCCTCTTCTGAGCAGACTGAGCAGCACCTTGTGGGACAACTCCCATCCCCGTCTTAACACCACTACCAACTACACCAACTGGCTTCTTCGCTGATACAGCATTACCCACAGATGGAGACGCCTTCACCAACCGCGGCTTCTTACTCGCCCGGTGGTTGGAATTACTATAAACTGAGTCCGAACTCTACCAAACCGGCGGAGCTTT] [+] EMBL CD149858 [GCCTGCTCGTCTTAACACCACTACCAACTACACCAACTGGCTTCTTCGCTGATACAGCATTACCCTCATCACTCGGATCCGAGTCGGAACTCGACGACGCAGGCTTCCCTACCACCTTCTTACCACCAACAGCCACACCGCTAACAGCCTTACTCACAGATGGAGACGCCTTCACCAACGCAGGCTTCTTACTCGCCGGCTGCTCGTCATCACTAGAATCTGAGTCCGAACTCGACGAAGCGGCCGCAGCTTTCCTCTTCTGAGCAGACTGAGCAGCACCTTGTGGGACAACTCCCATCCCCGTCTTAACACCACTACCAACTACACCAACTGGCTTCTTCGCTGATACAGCATTACCCACAGATGGAGACGCCTTCACCAACCGCGGCTTCTTACTCGCCCGGTGGTTGGAATTACTATAAACTGAGTCCGAACTCTACCAAACCGGCGGAGCTTT] consensusID : consensus_10860#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 393 fasta sequence [TGGTAGGGAAGCCTGCGTCGTCGAGTTCCGACTCGGATTCGAGTGATGAAGGTAATGCTGTATCAGCGAAGAAGCCAGTTGGTGTAGTTGGTAGTGGTGTTAAGACGGGGATGGGAGTTGTCCCACAAGGTGCTGCTCAGTCTGCTCAGAAGAAGAAAGCTGCGGCCGCTTCGTCGAGTTCGGACTCAGATTCTAGTGATGACGAGCAGCCGGCGAGTAAGAAGCCTGCGTTGGTGAAGGCGTCTCCATCTGTGAGCAAGGCTGTTAGCGGGGTGGCTGTTGGTGGTAAGAAGGTGATGGTGTCTCCTCTTGTTACTAGTTCGCGTCTTAATGGGGCTTTCAAAGTATCGAAACCTTGTGTCAATCGGAAACGTCGTTTCTCATTTGTCGGTT] [+] EMBL CD112441 [TGGTAGGGAAGCCTGCGTCGTCGAGTTCCGACTCGGATTCGAGTGATGAAGGTAATGCTGTATCAGCGAAGAAGCCAGTTGGTGTAGTTGGTAGTGGTGTTAAGACGGGGATGGGAGTTGTCCCACAAGGTGCTGCTCAGTCTGCTCAGAAGAAGAAAGCTGCGGCCGCTTCGTCGAGTTCGGACTCAGATTCTAGTGATGACGAGCAGCCGGCGAGTAAGAAGCCTGCGTTGGTGAAGGCGTCTCCATCTGTGAGCAAGGCTGTTAGCGGGGTGGCTGTTGGTGGTAAGAAGGTGATGGTGTCTCCTCTTGTTACTAGTTCGCGTCTTAATGGGGCTTTCAAAGTATCGAAACCTTGTGTCAATCGGAAACGTCGTTTCTCATTTGTCGGTT] consensusID : consensus_10860#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 359 fasta sequence [GTACTACATCTATGCTTTAAGTGAAAACGCCAAACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTGATGCAGAAATAAAAGCCGGAGTCCCCATCGGGAATATAGTTATCGGAGGTTTTTCGCAAGGTGGTTCAGTGGCCCTTTATAATGCACTTGGGAGGGATGTGCATGCCAGCATGGTACGACATATATGCTTTAAGTGAAAACGCCAAACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTGATGCAGAAATAAAAGCCGGAGTCCCCATCGGGAATATAGTTATCGGAGGTTTTTCGCAAGGTGGCTCAGTGGGC] [+] EMBL CD201268 [GTACTACATCTATGCTTTAAGTGAAAACGCCAAACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTGATGCAGAAATAAAAGCCGGAGTCCCCATCGGGAATATAGTTATCGGAGGTTTTTCGCAAGGTGGTTCAGTGGCCCTTTATAATGCACTTGGGAGGGATGTGCATGCCAGCATGGTACGACATATATGCTTTAAGTGAAAACGCCAAACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATTAGGAAAATTCGTTGATGCAGAAATAAAAGCCGGAGTCCCCATCGGGAATATAGTTATCGGAGGTTTTTCGCAAGGTGGCTCAGTGGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10860#2 -------------------------AACATGTATTTTAAAGCTTTCTGTACGAGAGGATG 35 consensus_10860#6 --------------------------GTAC-TACATCTATGCTTTAAGTG-AAAACGCCA 32 consensus_10860#1 AGTAGTAGCAGTAGTAGAACTGGAAATTATTGATTGCTGTCTCATTACAATTATTGATCA 60 consensus_10860#4 ------------------GCCTGCTCGTCTTAACACCACTACCAACTACACCAACTGGCT 42 consensus_10860#5 ------------------------TGGTAGGGAAGCCTGCGTCGTCGAGTTCCGACTCGG 36 consensus_10860#0 -------------TAGGAATATGAATATACATATAATATAGTTACTTA-GCAGTTGTTTA 46 consensus_10860#3 -----CGAGCTCGGTACCCGTCTGTGATGAGAGTCTCGACTTCGTGAACGATGAGAATGA 55 consensus_10860#2 AGCTGACTGAAG-AGAAAAAAAAGATGCTCGATATAAAT-----ATCAACTTAGAT-TAT 88 consensus_10860#6 AACAGGATGAAGCAGGAATAAAAGAGGCATCGCTTGAATT---AGGAAAATTCGTT-GAT 88 consensus_10860#1 AACACAATAAAA--GCAACTAGGTGGACCTTACTAAACTC---ATCCCCCGTCATCAGGA 115 consensus_10860#4 TCTTCGCTGATA---CAGCATTACCCTCATCACTCGGATCCGAGTCGGAACTCGAC-GAC 98 consensus_10860#5 ATTCGAGTGATG---AAGGTAATGCTGTATCAGCGAAGAAGCCAGTTGGTGTAGTTGGTA 93 consensus_10860#0 ATAAGAATACATGTATAATAACAGGAGCTGTTATAGGCTTGTGAAAAGCTTAGACCATTA 106 consensus_10860#3 CGACTATCAGATCGCGATCTGTAAGAGCCAGATCGTGACCTCTGGCCTGGTCGGTC-TTC 114 * consensus_10860#2 ACAAATTGTTATACGGTAAATTT--GAGTAAAAAG-ACTATGTTTATAGCTT------TC 139 consensus_10860#6 GCAGAAATAAAAGCCGGAGTCCC--CATCGGGAAT-ATAGTTATCGGAGGTT------T- 138 consensus_10860#1 GCAGAGGTAAACACCCCATAAAT--GGCCAAAAGA-GGGCAAACTGTTTTCT------C- 165 consensus_10860#4 GCAGGCTTCCCTACCACCTTCTTACCACCAACAGCCACACCGCTAACAGCCT------TA 152 consensus_10860#5 GTGGTGTTAAGACGGGGATGGGAGTTGTCCCACAAGGTGCTGCTCAGTCTGC------TC 147 consensus_10860#0 GAAAACCCAAATCTTTGTTGTTTCAGTGTTAAATCTGTTCTGACAAATTTTCA-TTGGTA 165 consensus_10860#3 GTAAACACGTAGCCTGCGTCCATAAAGCTCGTAGCCATCAAATTTCTCGATTGCTTCCTT 174 consensus_10860#2 TGTATTCTCAGAA-----TACATAAAAATTATTTGGTTATTCATTTTATTTGCGTGTTAA 194 consensus_10860#6 ----TTCGCAAGG-----TGGTTCAGTGGCCCTTTATAATGCACTTGGGAGGGATGTGCA 189 consensus_10860#1 ----TGGTGATGG-----AGGTGCTGCAAGCGGCGAAGAGTCAGC-AGGGGAAATGATCT 215 consensus_10860#4 CTCACAGATGGAGACGCCTTCACCAACGCAGGCTTCTTACTCGCCGGCTGCTCGTCATCA 212 consensus_10860#5 A--GAAGAAGAAAGCTGCGGCCGCTTCGTCGAGTTCGGACTCAGATTCTAGTGATGACGA 205 consensus_10860#0 TGTGCTTTCTGAGCTAATTGCCTCAACGGTACTTATGGTTTGGATTACTTTTTATGGTTA 225 consensus_10860#3 CATATCAGCGTAGGCAGCAAACTCAACAATGCCGTCGTTCTTAGCTGACTTGTGTGCGTC 234 * consensus_10860#2 TTCATACACAGCTAATACACAAATAATGGGGAAAGCATATACTGTCTTTGGAATATACTA 254 consensus_10860#6 TGCCAGCATGG-TACGACATATATGCTTT---AAGTGAAAACGCCAAACAGGATGAAGCA 245 consensus_10860#1 GGCCGCCACCGTCGTTTGATAAATCC---------CAGAAATGCCCCTTAGTGCAACATG 266 consensus_10860#4 CTAGAATCTGAGTCCGAACTCGACGAAGCGG-CCGCAGCTTTCCTCTTCTGAGCAGACT- 270 consensus_10860#5 GCAGCCGGCGAGTAAGAAGCCTGCGTTG------GTGAAGGCGTCTCCATCTGTGAGCAA 259 consensus_10860#0 GGATTTTCTTT-TAGCGAGTTAGTTTTGT---ACGGGATGGGGTCACTAACCACATGCCC 281 consensus_10860#3 CGCATAAGTAACTTCTCCAGCCTTACGCATCAAATCTTTGAGATCCTGTAAAAAAGAATA 294 consensus_10860#2 GAAATTAAAATGGGTGAAAAATAGTTTGGTTTCGTAAAGGAGTAATCATCAA-AAGACAA 313 consensus_10860#6 GGAATAAAA------GAGGCATCGCTTGAATT-----AGGAAAATTCGTTGA-TGCAGAA 293 consensus_10860#1 GAAGAAAGAAACGCTTCCACTCTGCCTCGTTCAGCCATTCTGGTACAAACGG-TCTCACA 325 consensus_10860#4 -GAGCAGCACCTTGTGGGACAACTCCCATCCCCGTCTTAACACCACTACCAACTACACCA 329 consensus_10860#5 GGCTGTTAG-----CGGGGTGGCTGTTGGTGGTAAGAAGGTGATGGTGTCTCCTCTTGTT 314 consensus_10860#0 AACCCTCCTCT---TGTATCCGGGCTTGGGACCGGC-AGTAGCCTCTGGAGGAGCTCCAG 337 consensus_10860#3 AACAACTGAAAAACCGTGCCCTGTATAATAAGCTAATATATACTACTAATTT-GGGTTAA 353 consensus_10860#2 TTTGAAACATGTGTTATT-TGAGAA-AGACATGAATAGATTAATTTTATTTGGCTGG--- 368 consensus_10860#6 ATAAAAGCCGGAGTCCCCATCGGGA-ATATAGTTATCGGAGGTTTTTCGCAAGGTGG--- 349 consensus_10860#1 ATTGATGGGGTTCCTTCTGACTTGC-ATACATTAACGGCTGCACTGCACAAAGTTCAGCT 384 consensus_10860#4 ACTGGCTTCTTCGCTGATACAGCATTACCCACAGATGGAGACGCCTTCACCAACCGCGGC 389 consensus_10860#5 ACTAGTTCGCGTCTTAAT--GGGGCTTTCAAAGTATCGAAACCTTGTGTCAATCGGAAAC 372 consensus_10860#0 GCGGAGTTAATTGCCTCAACAGTGCAGACTAAATATGTTTGAACTGTGATCATCAGTGGG 397 consensus_10860#3 GCTAGCCTAGTACTTAAAAACGCGCGAGTAATTTACCTCGCGTTTTGATCTGACCACA-- 411 * * consensus_10860#2 TTCCAGTACATAGCGGATATATGGCACATCAACATCTTTATCATGCTCATCGCTGCAACA 428 consensus_10860#6 CTC-AGTGGGC------------------------------------------------- 359 consensus_10860#1 CTCTGGTAGTCGTTTGCCTTATGGTAAGAATAGCAAAAAGTCACGAG-ATGGGCGCAAAT 443 consensus_10860#4 TTC--TTACTCGCCCGGTGGTTGGAATTACTATAAACTGAGTCCGAACTCTACCA-AACC 446 consensus_10860#5 GTC-GTTTCTCATTTGTCGGTT-------------------------------------- 393 consensus_10860#0 ATCTAGGAATCATATTCTACCTTTAACTTCGA-AAGCCAACCCTGTCTTATCTAGTAACT 456 consensus_10860#3 GTACGAGACCACGTTACCACATGCTCGGCCGGACGACCGTTGAACGGCGCGACCAGAAAC 471 * consensus_10860#2 GACGTCAAACACCAGGACTTTGACATGGGGAGGTATCTTGCGTTTGTTGACTGCTTCCAC 488 consensus_10860#6 ------------------------------------------------------------ consensus_10860#1 TACCTAGCAAACGTGGTGGAAAGCATGACGATCCTACTGACATTTTGGATGAGATCGAAC 503 consensus_10860#4 GGCGGAGCTTT------------------------------------------------- 457 consensus_10860#5 ------------------------------------------------------------ consensus_10860#0 AAGTCTAAATATATATTTTGATATTACAGACAATAAATAGTAACGCATGACAGTTATTAA 516 consensus_10860#3 AACCCTGGGCGACTGACC--ATGGCATGGAAAACGACCAATCCTACGCGTCCTACGCCAC 529 consensus_10860#2 CAAATCTCTTAATGACATAGCTAGACGTTCCTTACGCTTTGCCTCTGGCATGAAGAATGC 548 consensus_10860#6 ------------------------------------------------------------ consensus_10860#1 TGGACCCTGAGGATCCTGACTTTGATTCTGATGAGGATACACCTGTTACGTTTGATGAGT 563 consensus_10860#4 ------------------------------------------------------------ consensus_10860#5 ------------------------------------------------------------ consensus_10860#0 CTGATC----AATGACATATCTTGAGCAATAACTTGATAAATATATAATTTTCAGATTAT 572 consensus_10860#3 CCGAAACGACCGAACGTCAACGAGCGGTAACTGAATTCGAGATAACAAGCAGTTAGTTAC 589 consensus_10860#2 ATAGAGCATAGAAACATCTTGCGATAGCATTGTTACATTTAACTTCAAACTATCTTTGAA 608 consensus_10860#6 ------------------------------------------------------------ consensus_10860#1 TTCAACCA-----ACTCTGGCTGATGATGTATTTGAAAAGACTTTCTTCTCATTGATGAA 618 consensus_10860#4 ------------------------------------------------------------ consensus_10860#5 ------------------------------------------------------------ consensus_10860#0 ATTGCACA------CTGATCTTAGCTAAATAACCATTGAAAATCAGAAAGCACTGGACAC 626 consensus_10860#3 TTCTTGCA--GTTCTTACAAACAATCAAACAACAATCCCTTACCTGCCAGCTCACACGCG 647 consensus_10860#2 GTAATCAATTAAACCTTGTAAGGTC--ATAGGACCTGAAAGTTCGAACCGATCCCATAAA 666 consensus_10860#6 ------------------------------------------------------------ consensus_10860#1 CGAGTTTTTCATACATGGCAAAACTCAGGAGGTTATTGATGTTCTTTCGGATATGAACCT 678 consensus_10860#4 ------------------------------------------------------------ consensus_10860#5 ------------------------------------------------------------ consensus_10860#0 TTACTTCGTCTTA--TAATGAGACCTCTCAGAAGTGAGAACTCACAATCAATCCAAGGAT 684 consensus_10860#3 ACGAGAGATTCTCAACAATAACACGATACTCCGTCCTAGTTGGCGGACCGGTACCTGCGN 707 consensus_10860#2 GAAAATTCTGTGTCGTAGTATTTTGATTTGATAGGTGCTACAGGTTCATAAAATGAAGTA 726 consensus_10860#6 ------------------------------------------------------------ consensus_10860#1 TGCGGCACATCAACGTCGTCGACTTCCATACTTGGCGATTACCCTAGCCATTCAACATCG 738 consensus_10860#4 ------------------------------------------------------------ consensus_10860#5 ------------------------------------------------------------ consensus_10860#0 TGAACCCAGGACATTTAAGTCTCAATACTAGAGTTTAACCTTTAGATAACTGAATCAGCA 744 consensus_10860#3 GATTCGCAGAANCCAACGGGGTACCGA--------------------------------- 734 consensus_10860#2 AACGGCAATGCTAAATCGACGTAAGCATTTTTGAACAGTTCGAGTTTTTTGTGTCCTAGA 786 consensus_10860#6 ------------------------------------------------------------ consensus_10860#1 ACAAACACAGTGCGAGCTAACATCAGACCTGCTATCAGACATGTGCGGCANAGTCCTCAA 798 consensus_10860#4 ------------------------------------------------------------ consensus_10860#5 ------------------------------------------------------------ consensus_10860#0 TCTATTGATGTATAATTTTCTCTGTAAATCTCTCTGAAGTATTACCCGATTTGTACTTTA 804 consensus_10860#3 ------------------------------------------------------------ consensus_10860#2 ACAAGCTTGAATAGTTCTAG---------- 806 consensus_10860#6 ------------------------------ consensus_10860#1 TCAAGCTCACATTCAACAGGGATTCCAACT 828 consensus_10860#4 ------------------------------ consensus_10860#5 ------------------------------ consensus_10860#0 ACATGAAATCATAGATGATATTGA------ 828 consensus_10860#3 ------------------------------ |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||