These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10863#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1788 fasta sequence [GGTTCTGTGAAGTGTGATCCGGTGAAATCCAAG-GGCTTTGTGTATGTTTTTGTGTGGGAATATGGTGCCACCTATGACCAGTTTATTGAAGGCACATAGGTTTGCAAATCTCCCACCGTTTTCGTTCCTTCCTCCCAGTCCATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCCTTTCCAACCTTGGCATTGAAATCTCCCATCAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT-TCCCATCCTA-TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAATTGTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTTCATCATGGGACGTCATTTTTCCTTCTACTCCCAGGGCAGAGTTTGAATGGTTTGAATGATTTTTTCTGGTTAGCGTTTTTTTAGCGGGTTGATTTTCTACGGGATGGGGTCGCTAACCCCATGCCCAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCAGTAGCCCCTGGAGGAGCTACAGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACATTAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAACTAATTAACTGTACGTGGTATGAGGATGAGTTTG-TTTTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTATTTCCTTGTTTCTTATTAATTGTGTACATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTTTGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTCTGGGGTGAATTTCTTACTGGCATTGTAATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGCTAATTTTAATGATTATGTTCTTGATTTTATAAATATGGNGGGGTAAGCTTGTGGATCCGTTTACTTTAAAATTGGTAGTGTACAGA------AATAATAATAATAATAGCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATG-ATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTT-AGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAA-TAACTGTACATGATTANGTANNGTTNGATGGAGNGAAAGATATNATTNGNATTNGATTTNNGATTGNNNATTGGATGATATTTAC] [+] EMBL CD089036 [GGTTCTGTGAAGTGTGATCCGGTGAAATCCAAGTGGCTTTGTGTATGTTTTTGTGTGGGAATATGGTGCCACCTATGACCAGTTTATT ] [-] EMBL BE431314 [ GTGAAATCCAAG GGCTTTGTGTATGTTTTTGTGTGGGAATATGGTGCCACCTATGACCAGTTTATTGAAGGCACATAGGTTTGCAAATCTCCCACCGTTTTCGTTCCTTCCTCCCAGTCCATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCAATTCCAACCTTGGCATTGAAATCTCCCATTAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATTGACTGCAGCCTATCGTAGAATTGGTTTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGATGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTCGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGATCGGAGTATAACAGAAG ] [+] EMBL CD117287 [ CATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCCTTTCCAACCTTGGCATTGAAATCTCCCATCAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATCGACTGCAACCTGTCGTAGAATTGGTCTTTAGCTTCTTCATCGTAGTCGTTGGTCGGCGCATAACATTGGATGACGTTCATTATAATGCCCTATTTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGAATTTTGTGCTTGTTTGGATAGCATCAGTGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCGCTGATCCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACAT ] [-] EMBL CD180708 [ CCCATGACGTCTTCGTATCCAGTGTTGTCCTTTCCAACCTTGGCATTGAAATCTCCCATTAGAATGGTCAGGTCCTTGGTTGGGCACTTCTCGAAGATTGACTGCAGCCTATCGTAGAATTGGTTTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGATGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTCGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCACGACCGGAGTATAACAGAAGTTCCCCTGAAGATAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACTTCCAGGTTGTATTTCCTCATTTCCACAGAAATTTGGAAGACTCTGCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAA ] [+] EMBL CD162895 [ TTCCAACCTTGGCATTGAGATCTCCCATCAGAATGGTCAGGTCTTTGGTTGGGCACTTCTCGAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAGCCTGCATCCAATGCGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAg ] [+] EMBL CD162915 [ TTCCAACCTTGGCATTGAGATCTCCCATCAGAATGGTCAGGTCTTTGGTTGGGCACTTCTCGAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGCGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAGCAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAg ] [-] EMBL CD181140 [ TCCAACCTTAGCATTGAGATCTCCCATCAGAATGGTCAGGTCTTTGGTTGGGCACTTCTTGACGATCGACTGCAACCTGTCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGTAGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTCTGAAGGAGGCTTTGATGATCCTTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCAACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACATGCGTCCAATGTGTTTCGCTGATCCCAAGAACCTCCAGGTTGTATTTTCTCATTTCTGCACCAATTTGGAAGACTATTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAA ] [+] EMBL CD097276 [ TTGGGCACTTCTCGAAGATTGACTGCAGCCTATCGTAGAATTGGTTTTTAGCGTCTTCATCGTAGTCGTTGGTCGGCGCATAGCATTGGATGATGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGGCTTTGATGATCCTCGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCCCCTGAAGACAGTCTTTGTTGTCCAACCTGTGTCCAATGTGTTTCACTGATTCCAAGCACTTCCAGGTTGTATTTCCTCATCTCCGCAGAAATTTGGAAGACTCTGCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAATTGTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTTCATCATGGGACGTCATTTTTCCTTCTACTCCCAGGGC ] [-] EMBL CD114440 [ TGGATGACGTTCATTGTAATGCCCACTCTCTTTGTTTTGAAGGAGGCTTTGATGATCATTGGTCCATGAGAT TCCCATCCTA TAAGTGCATTTTGTGATTTTGTGGACAGCATCAATGCAACTCATTGTGTATGTGGGGCATTTTATTATTCATGACCGGAGTATAACAGAAGTTCCCATGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGCGTTTCACTGATTCCTAGCACCTCCAGGTTGTATTTTATCAATTATGCAGCAATTTGAAAGACTC ] [-] EMBL CD171331 [ ATGAGATATCCCTTCCTAGTAAGTGCATTTTGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCCCCTGAAGACAGTCGTTGT ] [+] EMBL CD086421 [ AGAT TCCCATCCAA TAAGTGCATTTTGTGCTTTTCTGGACAGCATCAATGCGACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCTCCTGAAGACAGTCGTTGTTGTTCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACC ] [-] EMBL CD117238 [ AGTGCATTTAGTGCTTTTCTAGACAGCATCAGTGCCACTCCTTGTGTATGTGGGGCATTTTCTTCTTCATGACCGGAGTATAACAGAAGTTCCCCTGAAGACAGTCGTTGTTGTCCAACCTGCGTCCAATGTGTTTCACTGATTCCAAGCACTTCCAGGTTGTATTTCCTCATTTCCGCAGAAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAATTTTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTTCATCATGAGACGTCACTTTTCCTTCTACTCCCAGGGCAGAGTTTGAATGGTTTGAATGATTTTTTCTGGTTAGCGTTTTTTTAGCGGGTTGATTTTCTACGGGATGGGGTCGCTAACCCCATGCCCAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCAGTAGCCCCTGGAGGAGCTACAGGCG ] [+] EMBL CD180904 [ TGAATGGTCTCAATGATTTTTTCTGGTTAGCGTTTTTTTAGCGAGTTGATTTTCTACGGGATGGGGTCGCTAACCCCATGCCCAACCCTCCTCCTTTACCCGGGCGTGGGACCGGCAGTAGCCCCTGGAGGAGCTACAGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACATTAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAACTAATTAACTGTACGTGGTATGAGGATGAGTTTG TTTTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTATTTCCTTGTTTCTTATTAATTGTGCATATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTGTGAATTGACTAGTAGTGAGCAAGAAGTTTTGT ] [+] EMBL CD084911 [ CGGCAGTAGCCCCTGGAGGAGCTACAGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACATTAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAACTAATTAACTGTACGTGTTATGAGGATGAGTTTGTTTTTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTAATTCCTTGTTCCTTATTAATTGTGTACATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTTTGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTCTGGGGTGAATTTCTTACTGGCATTGTAATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGCTAATTTTAATGATTATGTTCTTGATTTTATAAATATGGNGGGGTAAGCTTGTGGATCCGTTTACTTTAAAATTGGTAGTGTACAGA AATAATAATAATAATAGCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACT ] [+] EMBL CD088137 [ TGAGGATGAGTTTG TTCTTTCTACTTATTTGACTTGGTTAATTTATATGGTCTGCTTACCTATTTCTTTGTTTCTTATTAATTGTGTACATGAGAGATAGATAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTTTGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTTTGGGGTGAATTTCTTACTGGCATTGTAATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGCTAATTTTAATGATTATGTTCTTGATTTTATAAATATGGTGGGGTAAGCTTGTGGATCCGTTTACTTTAAAATAGGTAGTGTACAGA AATAATAATAATAATAG TAATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAGATATTATTGATG ATAATAAGGCGATAGGTGTGTGGTAATTTGCATA ] [-] EMBL CD156512 [ CGTTTACTTTAAAATTGGTAGTGCACAGAAATAATAATAATAATAATAATAGCCAGAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATG ATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTT AGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATTAACTGTA ] [+] EMBL CD092333 [ TAGCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGAATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTTAAGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGNTAATGAAA TAACTGTACATGATTANGTANNGTTNGATGGAGNGAAAGATATNATTNGNATTNGATTTNNGATTGNNNATTGGATGATATTTAC] consensusID : consensus_10863#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 882 fasta sequence [GAGCCATATTCGGCACGACGGAGGCTGTTATTGGTGTTTTGGACTTAACTGGTTGGGCTAGGCAGATCGCAGGACCGGTTAGCACTGTAGACTGCTCGTACGGTTTCATGTGTCACTGTTCCAATCGACAATTCGCTGCTCCCTGTTTGGCGGTCTTATCGCGTCACACATCAACTAGGCATCCACTCGGCTACAAGCATAACAGGAAGACGCAAACAAACATTATAAAAATAAATGATCATCATATTAATTGACCAAGAAGGAATATTCAGGTAAGACCTAAAGAAGAAAAGCCAAATATGGTCCACTGTCACTAGCAACTAAAATCTAGCCGATGTAAAATCAGCTATGGCTTCCGAACATCAATCATATATACCTGAATGTATTCATTGCTTTAATTATTCAACTTTACGTAAAGAATTTGAATAGACGGAGATCGTCTTGCTTTTTAATTTGAAAGGTACTCATCCAACTGTGCAAGTCAGTAACCGAATCGTCTTATAGAAGCACACATACATTTGAGTTTGTTTACATCAAATTTGGCTAAGCCCTTTTGTTAACTTATTTAACGGACAGTCATTCATACAACGACAACCTATCTATACTATTGTACTTTTATTATGTACGCTTGTACATTGCTTACTGCCTAAGCATGTATTTATTCTGCTAGCCTTACTATTAATCGCTTGATCCGATGATTCATGCCATTCCACTTGTATATATATGTACATCTTAATCCTGTTCACTGCTCTACACTGCACTGTACTGTACTCGCTCATTCGGCTCTCACGCTCACTCGCCTGTTTTATGACACCACTTTTTCATGCTTGCTTTACGTGCCTGTGATTTGGATATCTGTGTGTGGCCCAATATAAACGAAAT] [+] EMBL CD081717 [GAGCCATATTCGGCACGACGGAGGCTGTTATTGGTGTTTTGGACTTAACTGGTTGGGCTAGGCAGATCGCAGGACCGGTTAGCACTGTAGACTGCTCGTACGGTTTCATGTGTCACTGTTCCAATCGACAATTCGCTGCTCCCTGTTTGGCGGTCTTATCGCGTCACACATCAACTAGGCATCCACTCGGCTACAAGCATAACAGGAAGACGCAAACAAACATTATAAAAATAAATGATCATCATATTAATTGACCAAGAAGGAATATTCAGGTAAGACCTAAAGAAGAAAAGCCAAATATGGTCCACTGTCACTAGCAACTAAAATCTAGCCGATGTAAAATCAGCTATGGCTTCCGAACATCAATCATATATACCTGAATGTATTCATTGCTTTAATTATTCAACTTTACGTAAAGAATTTGAATAGACGGAGATCGTCTTGCTTTTTAATTTGAAAGGTACTCATCCAACTGTGCAAGTCAGTAACCGAATCGTCTTATAGAAGCACACATACATTTGAGTTTGTTTACATCAAATTTGGCTAAGCCCTTTTGTTAACTTATTTAACGGACAGTCATTCATACAACGACAACCTATCTATACTATTGTACTTTTATTATGTACGCTTGTACATTGCTTACTGCCTAAGCATGTATTTATTCTGCTAGCCTTACTATTAATCGCTTGATCCGATGATTCATGCCATTCCACTTGTATATATATGTACATCTTAATCCTGTTCACTGCTCTACACTGCACTGTACTGTACTCGCTCATTCGGCTCTCACGCTCACTCGCCTGTTTTATGACACCACTTTTTCATGCTTGCTTTACGTGCCTGTGATTTGGATATCTGTGTGTGGCCCAATATAAACGAAAT] consensusID : consensus_10863#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 443 fasta sequence [ACTAGGTAAGGATGGCAAATCAATTGATGAAGTAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCACTGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACAATGAACAAGTTTTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCAATCTTTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTGGTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGTAGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAATTTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA] [+] EMBL CD084822 [ACTAGGTAAGGATGGCAAATCAATTGATGAAGTAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCACTGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACAATGAACAAGTTTTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCAATCTTTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTGGTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGTAGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAATTTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA] [+] EMBL CD084854 [ACTAGGTAAGGATGGCAAATCAATTGATGAAGTAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCACTGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACAATGAACAAGTTCTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCAATCTTTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTGGTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGTAGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAATTTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA] consensusID : consensus_10863#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 391 fasta sequence [GCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTACTGATGATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGAAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAAATGAATTCACTGTACATGATTAGGTAGGTTTGATATGAGTGAAGTATATATTTGTATTTGAATTTGCATTTGCACTTGGATGCATATTTATATATC] [+] EMBL CD120339 [GCCAAAATGATAATAGCGATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTACTGATGATAATAAGGCGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTTTTTTGTTTAGACAGTGTTACGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGTAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGAAGTAGTAGTAGTAGTAGTAGAAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAAATGAATTCACTGTACATGATTAGGTAGGTTTGATATGAGTGAAGTATATATTTGTATTTGAATTTGCATTTGCACTTGGATGCATATTTATATATC] consensusID : consensus_10863#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 216 fasta sequence [GTCTTTAACGTCTTCATTGTGGTCGTTGATAGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGCCTTTGATGATCCTTGGTCCATGAGATTCCCATCCTATAAGTGCATTTTGTGTTTGTTTAGACAGCATCAATGCACCTCCTTGTGTATGTGTAGCATTTTCTTCTTCATGGTTGGAGTATAACAGAAG] [+] EMBL CD133610 [GTCTTTAACGTCTTCATTGTGGTCGTTGATAGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTGAAGGAGCCTTTGATGATCCTTGGTCCATGAGATTCCCATCCTATAAGTGCATTTTGTGTTTGTTTAGACAGCATCAATGCACCTCCTTGTGTATGTGTAGCATTTTCTTCTTCATGGTTGGAGTATAACAGAAG] consensusID : consensus_10863#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 89 fasta sequence [AGCCCGGGTAAAGGAGGAGGATTGGGCATGGGGTTAGCGATCCCATCCTGTAGAAAAACTAACTCGCTAAAAGAAACGCTACCAGAAAA] [+] EMBL CD071685 [AGCCCGGGTAAAGGAGGAGGATTGGGCATGGGGTTAGCGATCCCATCCTGTAGAAAAACTAACTCGCTAAAAGAAACGCTACCAGAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10863#0 GGTTCTGTGAAGTGTGATCCGGTGAAATCCAAGGGCTTTGTGTATGTTTTTGTGTGGGAA 60 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TATGGTGCCACCTATGACCAGTTTATTGAAGGCACATAGGTTTGCAAATCTCCCACCGTT 120 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TTCGTTCCTTCCTCCCAGTCCATGTTGTCCCATGACGTCTTCGTATCCAGTGTTGTCCTT 180 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TCCAACCTTGGCATTGAAATCTCCCATCAGAATGGTCAGGTCCTTGGTTGGGCACTTCTC 240 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 GAAGATCGACTGCAGCCTATCGTAGAATTGGTCTTTAGCGTCTTCATCGTAGTCGTTGGT 300 consensus_10863#4 ------------------------------GTCTTTAACGTCTTCATTGTGGTCGTTGAT 30 consensus_10863#3 ---------------------------------GCCAAAATGATAATAGCGATAGTAGCA 27 consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ----------------------------------GAGCCATATTCGGCACGACGGAGGCT 26 consensus_10863#2 ----------------------------ACTAGGTAAGGATGGCAAATCAATTGATGAAG 32 consensus_10863#0 CGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTG-AAG-GAG 358 consensus_10863#4 AGGCGCATAGCATTGGATGACGTTCATTGTAATGCCCTCTCTCTTTGTTTTG-AAG-GAG 88 consensus_10863#3 ATGATAATGATAA-AAGTACCACTGACAGAAATATTACTGATGATAATAAGGCGAT-AGG 85 consensus_10863#5 ---------------------------------------------AGCCCGGGTAA-AGG 14 consensus_10863#1 GTTATTGGTGTTTTGGACTTAACTGGTTGGGCTAGGCAGATCGCAGGACCGGTTAG-CAC 85 consensus_10863#2 TAGTGAAACTTCTCCAGTTGAGATGGCTGGGACACGTGTTACGTATGCCCAACCAGTCAC 92 * consensus_10863#0 GCTTTGATGATCCTTG--GTCCATGAGATTCCCATCCTATAAGTGCATTTTGT--GCTTT 414 consensus_10863#4 CCTTTGATGATCCTTG--GTCCATGAGATTCCCATCCTATAAGTGCATTTTGT--GTTTG 144 consensus_10863#3 TGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTT--TTTTG 143 consensus_10863#5 AGGAGGATTGGGCATGGGGTTAGCGA---TCCCATCCTGTAGAAAAACTAACT--CGCTA 69 consensus_10863#1 TGTA-GACTGCTCGTACGGTTTCATGTGTCACTGTTCCAATCGACAATTCGCTGCTCCCT 144 consensus_10863#2 TGACAAGTGGACTGAGCCATTTTTGGTTATCTAATCGGTCTGAGAGGATAATCACAAACA 152 * * consensus_10863#0 TCTGGACAGCATC---AGTGCCACTCCTTGTGTA-TGTGGGGCATTTTCTTC-------T 463 consensus_10863#4 TTTAGACAGCATC---AATGCACCTCCTTGTGTA-TGTGTAGCATTTTCTTC-------T 193 consensus_10863#3 TTTAGACAGTGTT---A-CGTGTAATGTTGCGTAACTTGTTTGATTTAGTTAAGTTGAGT 199 consensus_10863#5 --AAAGAAACGCT---ACCAGAAAA----------------------------------- 89 consensus_10863#1 GTTTGGCGGTCTT---ATCGCGTCACACATCAACTAGGCATCCACTCGGCTA-----CAA 196 consensus_10863#2 ATGAACAAGTTTTGAGAATTGGCAACACAGCTTTTTCAGAAGTGTTTGTCTGCA--ATCT 210 * consensus_10863#0 TCATGACCGGAGTATAAC----AGAAGTTCTCCTGAAGACAGTCGTTGTTGTCCAACCTG 519 consensus_10863#4 TCATGGTTGGAGTATAAC----AGAAG--------------------------------- 216 consensus_10863#3 AAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGAAGTAGTAGTAGTAGTAGTAG 259 consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 GCATAACAGGAAGACGCAAACAAACATTATAAAAATAAATGATCATCATATTAATTGACC 256 consensus_10863#2 TTGTGGTTAGTCTAGTTATTTGGGGATCAGAACTCCTTCTGGGGAATAAGAAGTTTGCTG 270 consensus_10863#0 CGTCCAATG-TGTTTCACTGATTCCAAGCACCTCCAGGTTGTATTTTCTCATTTCTGCAG 578 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 AAGTAGTAG-TTGCGGATGGACACATTTCTTGGTTAAATGAATTCACTGTACATGATTAG 318 consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 AAGAAGGAA-TATTCAGGTAAGACCTAAAGAAGAAAAGCCAAAT-ATGGTCCACTGTCAC 314 consensus_10863#2 GTTTAAAAGCTTATTTTTCCTCTTCTTCTCTTCATAGCTTTAAGAAAGATGTATTAATGT 330 consensus_10863#0 CAATTTGGAAGACTCTTCCGGTCTCCCACATTGTCCGGACATTCCATGTACCTATAAAAA 638 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 GTAGGTTTGATATGAGTGAAGTATATATTTGTATTTGAATTTGCATTTGCACTTGGATGC 378 consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 TAGCAACTAAAATCTAGCCGATGTAAAATCAGCTATGGCTTCCGAACATCAATCATATAT 374 consensus_10863#2 AGATGTCGGCCATCAAAGGTAATAAAATCCTTGCCTTGGCACCCCATTACAAACAGTAAT 390 consensus_10863#0 TTGTCGCTCTGGTTGTAAGAAGGTGCATCGGCCTCATGACTTCCGAAGGAACTCGGCTTT 698 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ATATTTATATATC----------------------------------------------- 391 consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ACCTGAATGTATTCATTGCTTTAATTATTCAACTTTACGTAAAGAATTTGAATAGACGGA 434 consensus_10863#2 TTATTTATATCTTTGAACATGGAGTGAGTTGGTTTTAATTTCACTAGTTTCCA------- 443 consensus_10863#0 CATCATGGGACGTCATTTTTCCTTCTACTCCCAGGGCAGAGTTTGAATGGTTTGAATGAT 758 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 GATCGTCTTGCTTTTTAATTTGAAAGGTACTCATCCAACTGTGCAAGTCAGTAACCGAAT 494 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TTTTTCTGGTTAGCGTTTTTTTAGCGGGTTGATTTTCTACGGGATGGGGTCGCTAACCCC 818 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 CGTCTTATAGAAGCACACATACATTTGAGTTTGTTTACATCAAATTTGGCTAA-GCCCTT 553 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 ATGCCCAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCAGTAGCCCCTGGAGGAGCTAC 878 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 TTGTTAACTTATTTAACGGACAGTCATTCATACAACGACAACCTATCTATACTATTGTAC 613 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 AGGCGGAGTTGTTGTTTATAGTCAATGGAATAATAATAATGAAGACAGTGATGGTAACAT 938 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 TTTTATTATGTACGCTTGTACATTGCTTACTGCCTAAGCATGTATTTATTCTGCTAGCCT 673 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TAACATAAATAAAACTGGGATGAAAGTTATCAGCGGATAGTGGTTGGCAAACTAACTAAC 998 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 TACTATTAATCGCTTGATCCGATGATTCATGCCATTCCACTTGTATATATATGTACATCT 733 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TAATTAACTGTACGTGGTATGAGGATGAGTTTGTTTTTTCTACTTATTTGACTTGGTTAA 1058 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 TAATCCTGTTCAC-TGCTCTACACTGCACTGTACTGTACTCGCTCATTCGGCTCTCACGC 792 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TTTATATGGTCTGCTTACCTATTTCCTTGTTTCTTATTAATTGTGTACATGAGAGATAGA 1118 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 TCACTCGCCTGTTTTATGACACCACTTTTTCATGCTTGCTTTACGTGCCTGTGATTTGGA 852 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TAAGCATAGCATTGACTTTTGAAACAACTTCTGAATTGACTAGTAGTGAGCAAGAAGTTT 1178 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 TATCTGTGTGTGGCCCAATATAAACGAAAT------------------------------ 882 consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TGTGAGAGGTTGAGAGTTGTTTAGTTTTGTTTTCTGGGGTGAATTTCTTACTGGCATTGT 1238 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 AATTATAGTTTTGTAAATCAACTGGTCAGTACTATTATTTTCGATGAAAAAAAGATTTGC 1298 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TAATTTTAATGATTATGTTCTTGATTTTATAAATATGGNGGGGTAAGCTTGTGGATCCGT 1358 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TTACTTTAAAATTGGTAGTGTACAGAAATAATAATAATAATAGCCAAAATGATAATAGCG 1418 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 ATAGTAGCAATGATAATGATAAAAGTACCACTGACAGAAATATTATTGATGATAATAAGG 1478 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 CGATAGGTGTGTGGTAATTTGTATAATTTTCGAATGTGCAGACAGGTATGTGCATTAGTT 1538 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TTTTGTTTAGACAGTGTTACGTGTAATGTTGTGTAACTTGTTTGATTTAGTTAAGTTGAG 1598 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TAAATGACTGGAATGTGGCTTGTAGCAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA 1658 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 GTAGTAGTAGTAGTTGCGGATGGACACATTTCTTGGTTAATGAAATAACTGTACATGATT 1718 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 ANGTANNGTTNGATGGAGNGAAAGATATNATTNGNATTNGATTTNNGATTGNNNATTGGA 1778 consensus_10863#4 ------------------------------------------------------------ consensus_10863#3 ------------------------------------------------------------ consensus_10863#5 ------------------------------------------------------------ consensus_10863#1 ------------------------------------------------------------ consensus_10863#2 ------------------------------------------------------------ consensus_10863#0 TGATATTTAC 1788 consensus_10863#4 ---------- consensus_10863#3 ---------- consensus_10863#5 ---------- consensus_10863#1 ---------- consensus_10863#2 ---------- |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||