cluster # 10866

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Schistosoma mansoni
cluster # 10866 cluster # 10866 Sequences # 23 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10866#0 length = 854 sequences # 17
consensus_10866#1 length = 506 sequences # 4

consensus_10866#2 length = 389 sequences # 1
consensus_10866#3 length = 207 sequences # 1

consensusID : consensus_10866#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 854
fasta sequence

                              [CAGGCCANAATTTGGCACGAGGCTCAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTTTTGGGTTGTGGCATAAGCACGGGTTATGGAGCTGTCTTTAATACTGCTAAAGTTGAGAAAGACAGCATATGTGCTGTTTGGGGTCTTGGAGCAGTTGGATTAGCAGTTATAATGGGATGCAAAAAAGCTGGTGCTAGAAGAATTATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGTATATTTGTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTAC]

[+] EMBL CD080866             [CAGGCCANAATTTGGCACGAGGCTCAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTTTTGGGTTGTGGCATAAGCACGGGTTATGGAGCTGTCTTTAATACTGCTAAAGTTGAGAAAGACAGCATATGTGCTGTTTGGGGTCTTGGAGCAGTTGGATTAGCAGTTATAATGGGATGCAAAAAAGCTGGTGCTAGAAGAATTATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATT AAATATCGTAT                                                                        ]
[-] EMBL CD135004             [                                  TGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTTTTGGGTTGTGGCATAAGCACGGGTTATGGAGCTGTCTTTAATACTGCTAAAGTTGAGAAAGACAGCATATGTGCTGTTTGGGGTCTTGGAGCAGTTGGATTAGCAGTTATAATGGGATGCAAAAAAGCTGGTGCTAGAAGAATTATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAACTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD147679             [                                                                     GTTGGCCTTTTGGGTTGTGGCATAAGCACGGGTTATGGAGCTGTCTTTAATACTGCTAAAGTTGAGAAAGACAGCATATGTGCTGTTTGGGGTCTTGGAGCAGTTGGATTAGCAGTTATAATGGGATGCAAAAAAGCTGGTGCTGGAAGAATTATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCCGAAATTTCAACTCGACCATTCC                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD147856             [                                                                      TTGGCCTTTTGGGTTGTGGCATAAGCACGGGTTATGGAGCTGTCTTTAATACTGCTAAAGTTGAGAAAGACAGCATATGTGCTGTTTGGGGTCTTGGAGCAGTTGGATTAGCAGTTATAATGGGATGCAAAAAAGCTGGTGCTGGAAGAATTATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCA                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL AI067204             [                                                                                                                                                                                   AGCAGTTATAATGGGATGCAAAAAAGCTGGTGCTAGAAGAATTATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGTATATTTGTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTAC]
[-] EMBL AI068221             [                                                                                                                                                                                                                        tGAATTATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGTATATTTGTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTAC]
[-] EMBL CD180540             [                                                                                                                                                                                                                             TATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGGTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD180531             [                                                                                                                                                                                                                             TATTGGAATAGATATTAATGAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGGTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD081264             [                                                                                                                                                                                                                                                                             gGGAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGTAT                                                                        ]
[-] EMBL CD075094             [                                                                                                                                                                                                                                                                               GAGCTACAGAATGCATAAATCCTGCTAAGCATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGTATA                                                                       ]
[+] EMBL CD130186             [                                                                                                                                                                                                                                                                                                                                 GTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGCAGTCTCGTGACTCAGTGCCCAGACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCA                                                                                                                                                                                                                                                   ]
[+] EMBL CD183938             [                                                                                                                                                                                                                                                                                                                                 GTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCC                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CD165187             [                                                                                                                                                                                                                                                                                                                                  TTATTGTTGAAATAACTGATGGAGGTTGTGATTATACTTTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACT                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AI068007             [                                                                                                                                                                                                                                                                                                                                                         GGTTGTGATTATACTGTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTATTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGATGAAGAATATTTAACAGGAACGATCAGGATTGATGAAATCATCAATCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTTTGCGTATTAAAATATCGTATA                                                                       ]
[+] EMBL SMAA18449            [                                                                                                                                                                                                                                                                                                                                                                                                       GTCAAGCTTTAGAATCATGTCACAAGGGCTGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCATTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGgaat                                                                       ]
[-] EMBL AI395153             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GACCATTCCAACTTGTAACTGCCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGACGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGTATATTTGTTGGTAAAAAAAAAAAAAAAAAAAA                                          ]
[-] EMBL AI068124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGTGACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTCATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGTATATTTGTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAGCTGCATTACCGTAC]




>consensus_10866#0
CAGGCCANAATTTGGCACGAGGCTCAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCA
CTGAATAAAGTTGGCCTTTTGGGTTGTGGCATAAGCACGGGTTATGGAGCTGTCTTTAAT
ACTGCTAAAGTTGAGAAAGACAGCATATGTGCTGTTTGGGGTCTTGGAGCAGTTGGATTA
GCAGTTATAATGGGATGCAAAAAAGCTGGTGCTAGAAGAATTATTGGAATAGATATTAAT
GAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAG
CATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACT
TTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGC
TGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCA
TTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGT
GACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTC
ATCACTCATCATTTTCAATTAAAAGATATCAATAAAGCTTTTGATTTAATGCGCGATGGT
ATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTGAT
ATCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTATTAAAATATCGT
ATATTTGTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCATGCAG
CTGCATTACCGTAC

consensusID : consensus_10866#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 506
fasta sequence

                              [GCCTATTATCTGTAAAGCCGCTGGTGCTTGGGAACCAAGTAAACCACTAGTGATTGAAGAGGTTGAAGTTGCTCCTCCATCAAGTGGGGAAGTGAGGATCAAGATTTATTCTTCCGGAGTTTGTCATACAGATGCATATACTTTGGGTGGTCATGATCCTGAGGGAGTTTTTCCTGTCATTCTTGGACATGAAGGTGCAGGCGTTGTAGAAAGTGTTGGGGAAGGTGTATCGTCTGTTGTTCCAGGAGACCACGTTATTCCATTATACATTCCACAATGTAATCAATGCAAATTTTGTCTATCTAAGGAAACAAATTTATGCTCGAAGATAAGGGAAACGCAAGGAAAAGGCCTCATGCCTGATAGATCTGTTCGTTTCAAATGTCGTGGTCGACAGGTGCATCACTTCATGGGCTGTAGCACTTTTAGTGAATACACAGTGCTACCTGAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTTTTGG]

[+] EMBL CD077882             [GCCTATTATCTGTAAAGCCGCTGGTGCTTGGGAACCAAGTAAACCACTAGTGATTGAAGAGGTTGAAGTTGCTCCTCCATCAAGTGGGGAAGTGAGGATCAAGATTTATTCTTCCGGAGTTTGTCATACA                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD121084             [                                       TAAACCACTAGTGATTGAAGAGGTTGAAGTTGCTCCTCCATCAAGTGGGGAAGTGAGGATCAAGATTTATTCTTCCGGAGTTTGTCATACAGATGCATATACTTTGGGTGGTCATGATCCTGAGGGAGTTTTTCCTGTCATTCTTGGACATGAAGGTGCAGGCGTTGTAGAAAGTGTTGGGGAAGGTGTATCGTCTGTTGTTCCAGGAGACCACGTTATTCCATTATACATTCCACAATGTAATCAATGCAAATTTTGTCTATCTAAGGAAACAAATTTATGCTCGAAGATAAGGGAAACGCAAGGAAAAGGCCTCATGCCTGATAGATCTGTTCGTTTCAAATGTCGTGGTCGACAGGTGCATCACTTCATGGGCTGTAGCACTTTTAGTGAATACACAGTGCTACCTGAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTTTTG ]
[+] EMBL CD121033             [                                       cAAACCACTAGTGATCGAAGAGGTTGAAGTTGCTCCTCCATCAAGTGGGGAAGTGAGGATCAAGATTTATTCTTCCGGAGTTTGTCATACAGATGCATATACTTTGGGTGGTCATGATCCTGAGGGAGTTTTTCCTGTCATTCTTGGACATGAAGGTGCAGGCGTTGTAGAAAGTGTTGGGGAAGGTGTATCGTCTGTTGTTCCAGGAGACCACGTTATTCCATTATACATTCCACAATGTAATCAATGCAAATTTTGTCTATCTAAGGAAACAAATTTATGCTCGAAGATAAGGGAAACGCAAGGAAAAGGCCTCATGCCTGATAGATCTGTTCGTTTCAAATGCCGTGGTCGACAGGTGCATCACTTCATGGGCTGTAGCACTTTTAGTGAATACACAGTGCTACCTGAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTTTTG ]
[-] EMBL CD120906             [                                        AAACCACTAGTGATTGAAGAGGTTGAAGTTGCTCCTCCATCAAGTGGGGAAGTGAGGATCAAGATTTATTCTTCCGGAGTTTGTCATACAGATGCATATACTTTGGGTGGTCATGATCCTGAGGGAGTTTTTCCTGTCATTCTTGGACATGAAGGTGCAGGCGTTGTAGAAAGTGTTGGGGAAGGTGTATCGTCTGTTGTTCCAGGAGACCACGTTATTCCATTATACATTCCACAATGTAATCAATGCAAATTTTGTCTATCTAAGGAAACAAATTTATGCTCGAAGATAAGGGAAACGCAAGGAAAAGGCCTCATGCCTGATAGATCTGTTCGTTTCAAATGTCGTGGTCGACAGGTGCATCACTTCATGGGCTGTAGCACTTTTAGTGAATACACAGTGCTACCTGAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTTTTGG]




>consensus_10866#1
GCCTATTATCTGTAAAGCCGCTGGTGCTTGGGAACCAAGTAAACCACTAGTGATTGAAGA
GGTTGAAGTTGCTCCTCCATCAAGTGGGGAAGTGAGGATCAAGATTTATTCTTCCGGAGT
TTGTCATACAGATGCATATACTTTGGGTGGTCATGATCCTGAGGGAGTTTTTCCTGTCAT
TCTTGGACATGAAGGTGCAGGCGTTGTAGAAAGTGTTGGGGAAGGTGTATCGTCTGTTGT
TCCAGGAGACCACGTTATTCCATTATACATTCCACAATGTAATCAATGCAAATTTTGTCT
ATCTAAGGAAACAAATTTATGCTCGAAGATAAGGGAAACGCAAGGAAAAGGCCTCATGCC
TGATAGATCTGTTCGTTTCAAATGTCGTGGTCGACAGGTGCATCACTTCATGGGCTGTAG
CACTTTTAGTGAATACACAGTGCTACCTGAAATTAGCTTGGCGAAAATTGATAAAAATGC
CCCACTGAATAAAGTTGGCCTTTTGG

consensusID : consensus_10866#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 389
fasta sequence

                              [CTATTTGGCAACGATTTCGTAGCATTGTCCATTATGGAGGTTGCTGAGCTGTTGCAGGTCAACGCCCGTATGTTGATACCATTGGTGCGTTACCTCGATAACTTGTAAGGTTGGTCATAAGCGGTGAAATTAGGTCTTTGAGTGGTGGGTGCAGTTATGATATCTGGTCACGTTCATCCTTCAAATAATGAAAGTGATGTCACTTTAATCATGCATGACATAGGGCAAATATTTAATGACACTACAACAGACGGACCATCTACCTAATGAGATAATTTCGCGATATCCTTTTTACTCAGTATACATACACCATATGTCGTATTGGTATGTAGAAAGTGTTGNGGAAGGTGTATCGTCTGTTGTTCCAGGAGACACGTTATTCCATTATA]

[+] EMBL CD195797             [CTATTTGGCAACGATTTCGTAGCATTGTCCATTATGGAGGTTGCTGAGCTGTTGCAGGTCAACGCCCGTATGTTGATACCATTGGTGCGTTACCTCGATAACTTGTAAGGTTGGTCATAAGCGGTGAAATTAGGTCTTTGAGTGGTGGGTGCAGTTATGATATCTGGTCACGTTCATCCTTCAAATAATGAAAGTGATGTCACTTTAATCATGCATGACATAGGGCAAATATTTAATGACACTACAACAGACGGACCATCTACCTAATGAGATAATTTCGCGATATCCTTTTTACTCAGTATACATACACCATATGTCGTATTGGTATGTAGAAAGTGTTGNGGAAGGTGTATCGTCTGTTGTTCCAGGAGACACGTTATTCCATTATA]




>consensus_10866#2
CTATTTGGCAACGATTTCGTAGCATTGTCCATTATGGAGGTTGCTGAGCTGTTGCAGGTC
AACGCCCGTATGTTGATACCATTGGTGCGTTACCTCGATAACTTGTAAGGTTGGTCATAA
GCGGTGAAATTAGGTCTTTGAGTGGTGGGTGCAGTTATGATATCTGGTCACGTTCATCCT
TCAAATAATGAAAGTGATGTCACTTTAATCATGCATGACATAGGGCAAATATTTAATGAC
ACTACAACAGACGGACCATCTACCTAATGAGATAATTTCGCGATATCCTTTTTACTCAGT
ATACATACACCATATGTCGTATTGGTATGTAGAAAGTGTTGNGGAAGGTGTATCGTCTGT
TGTTCCAGGAGACACGTTATTCCATTATA

consensusID : consensus_10866#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 207
fasta sequence

                              [TTCATCACTCTTCATTTTCAATTAAAAGATGTCAATAACGCTTTTGACCTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACTTTTCGACTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGGGTTATGGCATTTTCTGCGTATTAAAATATCGTATATTTGAAAAAAAAAAAAAATAA]

[-] EMBL AI394806             [TTCATCACTCTTCATTTTCAATTAAAAGATGTCAATAACGCTTTTGACCTAATGCGCGATGGTATTTGCATCAGACCAATGATTCACTTTTCGACTCCGTAAAATCCTGGTGTCGTCTGTGATATCTATAGTTACCATTGTTTCCCTAAGGGTTATGGCATTTTCTGCGTATTAAAATATCGTATATTTGAAAAAAAAAAAAAATAA]




>consensus_10866#3
TTCATCACTCTTCATTTTCAATTAAAAGATGTCAATAACGCTTTTGACCTAATGCGCGAT
GGTATTTGCATCAGACCAATGATTCACTTTTCGACTCCGTAAAATCCTGGTGTCGTCTGT
GATATCTATAGTTACCATTGTTTCCCTAAGGGTTATGGCATTTTCTGCGTATTAAAATAT
CGTATATTTGAAAAAAAAAAAAAATAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10866#0      CAGGCCANAATTTGGCACGAGGCTCAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCA 60
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      ------------------------------------------------------------
consensus_10866#2      ------------------------------------------------------------
                                                                                   

consensus_10866#0      CTGAATAAAGTTGGCCTTTTGGGTTGTGGCATAAGCACGGGTTATGGAGCTGTCTTTAAT 120
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      ------------------------------------------------------------
consensus_10866#2      ------------------------------------------------------------
                                                                                   

consensus_10866#0      ACTGCTAAAGTTGAGAAAGACAGCATATGTGCTGTTTGGGGTCTTGGAGCAGTTGGATTA 180
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      ------------------------------------------------------------
consensus_10866#2      ------------------------------------------------------------
                                                                                   

consensus_10866#0      GCAGTTATAATGGGATGCAAAAAAGCTGGTGCTAGAAGAATTATTGGAATAGATATTAAT 240
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      ------------------------------------------------------------
consensus_10866#2      ------------------------------------------------------------
                                                                                   

consensus_10866#0      GAAAACAAGTTTGGTTTAGCTCTGTCTTTTGGAGCTACAGAATGCATAAATCCTGCTAAG 300
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      ------------------------------------------------------------
consensus_10866#2      ------------------------------------------------------------
                                                                                   

consensus_10866#0      CATTCCAAGCCAATACAACAGGTTATTGTTGAAATAACTGATGGAGGTTGTGATTATACT 360
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      --------------------GCCTATTATCTGTAAAGCCGCTGGTGCTTGGGAACCAAGT 40
consensus_10866#2      ------------------------------------------------------------
                                                                                   

consensus_10866#0      TTTGAATGTGTCGGGAATGTAGCTACTATGCGTCAAGCTTTAGAATCATGTCACAAGGGC 420
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      AAACCACTAGTGATTGAAGAGGTTGAAGTTGCTCCTCCATCAAGTGGGGAAGTGAGGATC 100
consensus_10866#2      ----------------------------------------CTATTTGGCAACGATTTCGT 20
                                                                                   

consensus_10866#0      TGGGGTGTTTCAGTTGTAATTGGTGTAGCAGAGGCTGGGGCAGAAATTTCAACTCGACCA 480
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      AAGATTTATTCTTCCGGAGTTTGTCATACAGATGC----------ATATACTTTGGGTGG 150
consensus_10866#2      AGCATTGTCCATTATGGAGGTTGCTGAGCTGTTGC--------AGGTCAACGCCCGTATG 72
                                                                                   

consensus_10866#0      TTCCAACTTGTAACTGGCCGTACATGGAAGGGTTGTGCTTTTGGAGGTTGGAAGTCTCGT 540
consensus_10866#3      ------------------------------------------------------------
consensus_10866#1      TCATGATCCTGAGGGAGTTTTTCCTGTCATTCTTGGACATGAAGGTGCAGGCGTTGTAGA 210
consensus_10866#2      TTGATACCATTGGTGCGTTACCTCGATAA--CTTGTAAGGTTGGTCATAAGCGGTGAAAT 130
                                                                                   

consensus_10866#0      GACTCAGTGCCCAAACTAGTTGAAGACTATTTATCAGGAACGATCAGGGTTGATGAATTC 600
consensus_10866#3      ---------------------------------------------------------TTC 3
consensus_10866#1      AAGTGTTGGGGAAGGTGTATCGTCTGTTGTTC--CAGGAGACCACGTTATTCCATTATAC 268
consensus_10866#2      TAGGTCTTTGAGTGGTGGGT-----GCAGTT----ATGATATCTGGTCA--CGTTCATCC 179
                                                                                * *

consensus_10866#0      ATCACTCATCATTTTCAAT-TAAAAGATATCAATA-AAGCTTTTGATTTAATGCGCGATG 658
consensus_10866#3      ATCACTCTTCATTTTCAAT-TAAAAGATGTCAATA-ACGCTTTTGACCTAATGCGCGATG 61
consensus_10866#1      ATTCCACAATGTAATCAATGCAAATTTTGTCTATCTAAGGAAACAAATTTATGCTCGAAG 328
consensus_10866#2      TTCAAATAATGAAAGTGATGTCACTTTAATC-ATGCATGACATAGGGCAAATATTTAATG 238
                        *               **   *      ** **  * *           **     * *

consensus_10866#0      GTATTTGCATCAGACCAATGATTCACCTCTTCGCTCCGTAAAATCCTGGTGTCGTCTGTG 718
consensus_10866#3      GTATTTGCATCAGACCAATGATTCACTTTTCGACTCCGTAAAATCCTGGTGTCGTCTGTG 121
consensus_10866#1      ATAAGGGAAACGCAAGGAAAAG--GCCTCATGCCTGATAGATCTGTTCGTTTCAAATGTC 386
consensus_10866#2      ACACT-ACAACAGACGGACCATCTACCTAATGA--GATAATTTCGCGATATCCTTTTTAC 295
                         *     * *  *   *  *    * *                        *   *   

consensus_10866#0      ATA-TCTATAGTTACCATTGTTTCCCTAAGTGTTATGGCATTTTCTGCGTAT-TAAAATA 776
consensus_10866#3      ATA-TCTATAGTTACCATTGTTTCCCTAAGGGTTATGGCATTTTCTGCGTAT-TAAAATA 179
consensus_10866#1      GTGGTCGACAGGTGC-ATCACTTC---ATGGGCTGTAGCACTTTTAGTGAATACACAGTG 442
consensus_10866#2      TCAGTATACATACACCAT-ATGTCGTATTGGTATGTAGAAAGTGTTGNGGAA--GGTGTA 352
                           *  * *    * **    **     *   * * * *  *   * * *       * 

consensus_10866#0      TCGTATATTTGTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATGCCAT 836
consensus_10866#3      TCGTATATTTG-----AAAAAAAAAAAAAATAA--------------------------- 207
consensus_10866#1      CTACCTGAAATTAGCTTGGCGAAAATTGATAAAAATGCCCCACTGAATAAAGTTGGCCTT 502
consensus_10866#2      TCGTCTGTTGTT--CCAGGAGACACGTTATTCCATTATA--------------------- 389
                            *               * *    *                               

consensus_10866#0      GCAGCTGCATTACCGTAC 854
consensus_10866#3      ------------------
consensus_10866#1      TTGG-------------- 506
consensus_10866#2      ------------------