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Schistosoma mansoni
cluster # 10867 cluster # 10867       Sequences # 23       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10867#0 length = 1765 sequences # 20  
 consensus_10867#1 length = 569 sequences # 2  
consensus_10867#2 length = 420 sequences # 1  
consensusID : consensus_10867#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 20
consensus length = 1765
fasta sequence 
                              [AAAAATAAATTATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCTTAAACCCGGC--AACTAA-GAATAATAATAATAATAAT-AATGATA-CAATAGAAATGTAAATA-CAATAAAA-CAATA-CAAATATGTGTATAGAGGTAATGAAAGAA-CAAAAAAAGAGAAAATTAAATAACTCCAACTAAATCAATCACTATTCGTGATCATTACATCACCAAGCTTATATAG--CACACACACACATAACATATAGACACAAACACCGCTTGGATGTCATGAGGTTGAACAAATTCTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATA-CGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTATTTATAAATGTATATAACGTATAGGTCATTTTGGTGTTATAATAAGACACAAAAGTCTCTTTGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAGAAAAACTTACAGAATTCTTGAGTAAGCATGGGTGCCACTCAAAAATATAAGCAACAAAGATTATATGGATAAGAATAGGGAATTCCTGCCTTTTTTACCGCACTTTTACGCTGACAACCATGTTATACAGTAAATAGTTGTGTTGGTAT-AAGAGGTGTGGTTC-TGGAAAAAAAAAACTATAATGCAACATGTTTCATAAAATGAAAATACATTGGAATTCCAACGTGAGA-AAAGTCCCATAAGTAGGGGTAGATGATAATAATAATAGTAATAATAATCACAATAAAAAATGAAGCAACAAATG-C-ATAGAGATGGATTAGAATTGATTGACAATTACGACCTCTTAGTGTATTTATATTCACAAAAAGATTAATGATAAACTTTGCAAAGACCATCGGTGTGCGAAGAAAATCAAAATTAAAGGCATTGAATAAATATG-AAAAAAAAAAACAAGTTGTGTTGTAGGAGGAGCTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACGGGAAGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGATAACATTTGGAACACATATCTTTAAACCGAACACTTCCATAGAAGCCACAACCACGTTTACACATATTCTTGTTTTCAGGTTTATTTTCCAGCTCTGATGTTTCGTTATTCATTCTTAAAAACTATTAATGAAAGACAAACCCCTTGCCCG]

[+] EMBL CD074756             [AAAAATAAATTATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCTTAAACCCGGC  AACTAA GAATAATAATAATAATAAT AATGATA CAATAGAAATGTAAATA CAATAAAA CAATA CAAATATGTGTATAGAGGTAATGAAAGAA CAAAAAAAGAGAAAATTAAATAACTCCAACTAAATCAATCACTATTCGTGATCATTACATCACCAAGCTTATATAG  CACACACACACATAACATATAGACACAAACACCGCTTGGATGTCATGAGGTTGAACAAATTCTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATA CGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTATTTATAAATGTATATAACGTATAGGTCATTTTGGTGTTATAATAAGACACAAAAGTCTCTTTGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAGAAAAACTTACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL SM6911               [              GGTTATGGTACTGAAATCCTGTAAACATACAGTNACAAGTGGGTCTTAAACCCGGCCGGCCTAAGGATTAATAATNATAATAATNATTGATACCNATAGAAATGTAAATACCAATAAAACCAATACCAAATATGTGTATAGAGGTAATGAAAGAACCNCANAAAGAGGAAATTAAATAACTCCAACTAAATCAATCACTATTCGTGATCATTACATCACCAAGCTTATATAGCACACACACACACATAACATATAGACACAAACACCGCTTGGATGTCATGAGGTTGAACAAATTCTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATACCGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTATTTATAAATGTATATAACGTATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD192790             [                                                                                                                                                                                                                                                ATATAG  CACACACACACATAACATATAGACACAAACACCGCTTGGATGTCATGAGGTTGAACAAATTCTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATA CGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTGTTTATAAATGTATATAACGTATAGGTCATTTTGGTGTTATAATAAGACACAAAAGTCTCTTTGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACACGTTAGACAAAACCATCCAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD110989             [                                                                                                                                                                                                                                                                                                                      TCCAGTGACCCTTGTTCACACACATATATTGTACAAGTAATA CGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTATTTATAAATGTATATAACGTATAGGTCATTTTGGTGTTATAATAAGACACAAAAGTCTCTTTGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAGAAAAACTTACAGAATTCTTGAGTAAGCATGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CD083979             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TACTAGTAAACCTACACGGTAGACTAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGAAATATAGACAAACTTACAGAATTCTTGAGTAAGCATGGGTGCCACTCAAAAATATAAGCAACAAAGATTATATGGATAAGAATAGGGAATTCCTGCCTTTTTTACCGCACTTTTACGCTGACAACCATGTTATACAGTAAATAGTTGTGTTGGTAT AAGAGGTGTGGTTCATGGAAAAAATAAACTATAATGCAACATGTTTCATAAAATGAAAATACATTGGAATTCCAACGTGAGAGAAAGTCCCATAAGTAGGGGTAGATGATAATAATAATAGTAATAATAATCACAATAAAAAATGAAGCAACAAATG CTATAGAGATGGATTAGAATTGATTGACAATTACGACCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD083877             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGAATAGGGAATTCCT CCTTTTTTACCGCACTTTTACGCTGACAACCATGTTATACAGTATATAGTTGTGTTGGTAT AAGAGGTGTGGTTC TGGAAAAAAAAAACTATAATGCAACATGTTTCATAAAATGAAAATACATTGGAATTCCAACGTGAGA AAAGTCCCATAAGTAGGGGTAGATGATAATAATAATAGTAATAATAATCACAATAAAAAATGAAGCAACAAATG C ATAGAGATGGATTAGAATTGATTGACAATTACGACCTCg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL AI975140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTGGTCTAAAGAGGTGTGGTTC TGGAAAAAAAAAACTATAACGCAACATGTTTCATAAAATGAACATACATTGGAATTCCAACGTGAGA AAAGTCCCATAAGTAGGGGTAGATGATAATAATAATAGTAATAATAGTCGCAATAAAAAATGAAGCAACAAATGCC ATAGAGATGGATTAGAATTGATTGACAATTACGATTTATTAGTGTATTTATATTCACAAAAAGATTAATGATAAACTTTGCAAAGACCATCGGTGTGCGAAGAAAATCAAAATTAAAGGCATTGAATAAATATG AAAAAAAAAACCAAGTTGTGTTGTAGGAGGAGCTGATATCGTCTTAATATTGGTTTCGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTAACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL AI975657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGGAAAAAAAAAACTATAATGCAACATGTTTCATAAAATGAAAATACATTGGAATTCCAACGTGAGA AAAGTCCCATAAGTAGGGGTAGATGATAATAATAATAGTAATAATAATCCCAATAAANAATGAAGCAACAAATGCC ATAGAGATGGATTAGAATTGATTGACAATTACGATTTATTAGTGTATTTATATTCACAAAAAGATTAATGATAAACTTTGCAAAGACCATCGGTGTGCGAAGAAAATCAAAATTAAAGGCATTGAATAAATATG AAAAAAAAAATCAAGTTGTGTTGTAGGAGGAGCTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD122210             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGCGAAGAAAATCAAAATTAAAGGCATTGAATAAATATG AAAAAAAAAAACAAGTTGTGTTGTAGGAGGACCTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD122225             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGCGAAGAAAATTAAAACTAAAGGCATTGAATAAATATGAAAAAAAAAAAACAAGTTGTGTTGTAGGAGGACCTGATATCGTCTTAATATTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD122217             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGCGAAGGAAATTAAAATTAAAGGCATTGAATAAATATG  AAAAAAAAAACAAGTTGTGTTGTGGGAGGAGCTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD122219             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGCGAAGAAAATTAAAATTAAAGGCATTGAATAAATACG AAAAAAAAAAACAAGTTGTGTTGTAGGAGGAGCTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD148521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAAAATCAAAATTAAAGGCATTGAATAAATATG  AAGAAAAAAACAAGTTGTGTTGTAGGAGGAGCTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATGTCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACGGGAAGCTGACAAGTCGGCTTTGGAAGTT                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CD151870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTAAAGGCATTGAATAAATAGG AAAAAAAAAAACAAGTTGTGTTGTAGGAGGAGCTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACGGGAGGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTA                                                                                                                                                                                              ]
[+] EMBL CD123099             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGATATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACGGGAAGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTG                                                                                                                                                                                                                                                                    ]
[+] EMBL CD168149             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD196784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGCGAGTTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACGGGAAGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGATAACATTTGGAACACATATCTTTAAACCGAACACTTCCATAGAA                                                                                                           ]
[-] EMBL AI975577             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACGACCATTTGCTTGATAATCATAAGCACACTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCTGTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACGGGAAGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAACTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGATAACATTTGGAACACATATCTTTAAACCGAACACTTCCATAGAAGCCACAACCACGTTTACACATATTCTTGTTTTCAGGTTTATTTTCCAGCTCTGATGTTTCGTTATTCATTCTTAAAAACTATTAATGAAAGACAAACCCCTTGCCCG]
[+] EMBL CD191979             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATTGACGCCAAGAACGGGACGGGAAGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAA                                                                                                                                                                  ]
[+] EMBL CD192097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATTGACGCCAAGAACGGGACGGGAAGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAA                                                                                                                                                                  ]




>consensus_10867#0
AAAAATAAATTATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCT
TAAACCCGGCAACTAAGAATAATAATAATAATAATAATGATACAATAGAAATGTAAATAC
AATAAAACAATACAAATATGTGTATAGAGGTAATGAAAGAACAAAAAAAGAGAAAATTAA
ATAACTCCAACTAAATCAATCACTATTCGTGATCATTACATCACCAAGCTTATATAGCAC
ACACACACATAACATATAGACACAAACACCGCTTGGATGTCATGAGGTTGAACAAATTCT
CCATTGACCCTTGTTCACACACATATATTGTACAAGTAATACGAATGAAATATAAACTAA
AAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTATTTA
TAAATGTATATAACGTATAGGTCATTTTGGTGTTATAATAAGACACAAAAGTCTCTTTGC
AAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACC
TACACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAG
AAAAACTTACAGAATTCTTGAGTAAGCATGGGTGCCACTCAAAAATATAAGCAACAAAGA
TTATATGGATAAGAATAGGGAATTCCTGCCTTTTTTACCGCACTTTTACGCTGACAACCA
TGTTATACAGTAAATAGTTGTGTTGGTATAAGAGGTGTGGTTCTGGAAAAAAAAAACTAT
AATGCAACATGTTTCATAAAATGAAAATACATTGGAATTCCAACGTGAGAAAAGTCCCAT
AAGTAGGGGTAGATGATAATAATAATAGTAATAATAATCACAATAAAAAATGAAGCAACA
AATGCATAGAGATGGATTAGAATTGATTGACAATTACGACCTCTTAGTGTATTTATATTC
ACAAAAAGATTAATGATAAACTTTGCAAAGACCATCGGTGTGCGAAGAAAATCAAAATTA
AAGGCATTGAATAAATATGAAAAAAAAAAACAAGTTGTGTTGTAGGAGGAGCTGATATCG
TCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAAGGTT
TAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACGCACT
TCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACACTCG
TGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAAACCT
GTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACGGGAA
GCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGT
GTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGA
GAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTG
GAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGATAACAT
TTGGAACACATATCTTTAAACCGAACACTTCCATAGAAGCCACAACCACGTTTACACATA
TTCTTGTTTTCAGGTTTATTTTCCAGCTCTGATGTTTCGTTATTCATTCTTAAAAACTAT
TAATGAAAGACAAACCCCTTGCCCG

consensusID : consensus_10867#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 569
fasta sequence 
                              [AAAATAAATNATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCTTAAACCCGGCAACTATGTAAATACAATAAACCAATACAAATATGTGTATAGAGGTAATGAAAGAACAAAAAAAGAGAAAATTAAATAACTCCAACTAAATCAATCACTATTCGTGATCATTACATCACCAAGCTTATATAGCACACACACACATAACATATAGACACAAACACCGNNNNNNNNNNNNNNNNNGAACAAATTCTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATACGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTATTTATAAATGTATATAACGTATCAAAAGTCTCTTTGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAGAAAAACTTACAGAATTCTTGAGTAAGCATGGGTG]

[-] EMBL CD080923             [AAAATAAATNATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCTTAAACCCGGCAACTATGTAAATACAATAAACCAATACAAATATGTGTATAGAGGTAATGAAAGAACAAAAAAAGAGAAAATTAAATAACTCCAACTAAATCAATCACTATTCGTGATCATTACATCACCAAGCTTATATAGCACACACACACATAACATATAGACACAAACACCGNNNNNNNNNNNNNNNNNGAACAAATTCTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATACGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTATTTATAAATGTATATAACGTATCAAAAGTCTCTTTGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAGAAAAACTTACAGAATTCTTGAGTAAGCATGGGTG]
[-] EMBL CD162252             [                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAGAAAAACTTACAGAATTCTTGAGTAAGCATGGGTG]




>consensus_10867#1
AAAATAAATNATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCTT
AAACCCGGCAACTATGTAAATACAATAAACCAATACAAATATGTGTATAGAGGTAATGAA
AGAACAAAAAAAGAGAAAATTAAATAACTCCAACTAAATCAATCACTATTCGTGATCATT
ACATCACCAAGCTTATATAGCACACACACACATAACATATAGACACAAACACCGNNNNNN
NNNNNNNNNNNGAACAAATTCTCCATTGACCCTTGTTCACACACATATATTGTACAAGTA
ATACGAATGAAATATAAACTAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTT
TTTTCCTATCAGTATGTATTTATAAATGTATATAACGTATCAAAAGTCTCTTTGCAAACC
AAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAAACCTACAC
GTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATATATAGAAAAA
CTTACAGAATTCTTGAGTAAGCATGGGTG

consensusID : consensus_10867#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 420
fasta sequence 
                              [ATCAGTGACAAAATATCAGACAAAGTATGATTAGAGAGGAAAGTAAAAAATAATTTTGAAAATCATGATATAAAAGACAAGGAGTGAGTACACCAACGTCACTGTCATCGAGTTTGAGTCATACCTGGACAGAGCAAAAAACAAATGATTGAATCATAGCATATTTTAAATACCATACCTTTGGAAGTTTCTAGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGTTAACATTTGGAACACATATC]

[+] EMBL CD194941             [ATCAGTGACAAAATATCAGACAAAGTATGATTAGAGAGGAAAGTAAAAAATAATTTTGAAAATCATGATATAAAAGACAAGGAGTGAGTACACCAACGTCACTGTCATCGAGTTTGAGTCATACCTGGACAGAGCAAAAAACAAATGATTGAATCATAGCATATTTTAAATACCATACCTTTGGAAGTTTCTAGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGTTAACATTTGGAACACATATC]




>consensus_10867#2
ATCAGTGACAAAATATCAGACAAAGTATGATTAGAGAGGAAAGTAAAAAATAATTTTGAA
AATCATGATATAAAAGACAAGGAGTGAGTACACCAACGTCACTGTCATCGAGTTTGAGTC
ATACCTGGACAGAGCAAAAAACAAATGATTGAATCATAGCATATTTTAAATACCATACCT
TTGGAAGTTTCTAGCAGAGTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGATAATTG
GGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGTTCACAGCA
ATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGAAGTGGAATGAACAAGTGT
AGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGTTAACATTTGGAACACATATC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10867#0      AAAAATAAATTATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCT 60
consensus_10867#1      -AAAATAAATNATAGGTAATGGTACTGAAATCCTGTAAACATACAGTTACAAGTGGGTCT 59
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      TAAACCCGGCAACTAAGAATAATAATAATAATAATAATGATACAATAGAAATGTAAAT-A 119
consensus_10867#1      TAAACCCGGCAACT------------------------------------ATGTAAAT-A 82
consensus_10867#2      ----------------------------------------------------ATCAGTGA 8
                                                                            * * * *

consensus_10867#0      CAATAAAACAATACAAATATGTGTATAGAGGTAATGAAAGAACAAAAAAAGAGAAAATTA 179
consensus_10867#1      CAATAAACCAATACAAATATGTGTATAGAGGTAATGAAAGAACAAAAAAAGAGAAAATTA 142
consensus_10867#2      CAAAATATCAGACAAAGTATGATTAGAGAGGAAAGTAAAAAATAATTTTGAAAATCATGA 68
                       *** * * **    ** ****  ** ***** **  *** ** **      * *  ** *

consensus_10867#0      AATAACTCCAACTAAATCAATCACTATTCGTGATCATTAC-ATCACCAAGCTTATATAGC 238
consensus_10867#1      AATAACTCCAACTAAATCAATCACTATTCGTGATCATTAC-ATCACCAAGCTTATATAGC 201
consensus_10867#2      TATAA----AAGACAAGGAGTGAGTA--CACCAACGTCACTGTCATCGAGTTTGAGT--C 120
                        ****    **   **  * * * **  *   * * * **  *** * ** **   *  *

consensus_10867#0      ACACACACACATAACATATAGACACAAACACCGCTTGGATGTCATGAGGTTGAACAAATT 298
consensus_10867#1      ACACACACACATAACATATAGACACAAACACCGNNNNNNNNNNNNNNNNN-GAACAAATT 260
consensus_10867#2      ATACCTGGACAGAGCA---AAAAACAAATGATTGAATCATAGCATATTTT--AAATACCA 175
                       * **    *** * **   * * *****                        **  *   

consensus_10867#0      CTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATACGAATGAA-ATATAAAC 357
consensus_10867#1      CTCCATTGACCCTTGTTCACACACATATATTGTACAAGTAATACGAATGAA-ATATAAAC 319
consensus_10867#2      TACCTTTGGAAGTTTCTAGCAGA-GTCTGAGGGATTTGCCTTTCGTTTAAGTGTACGAGA 234
                         ** ***    **  *  ** *  * *   * *   *   * **  * *   **  *  

consensus_10867#0      TAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTAT 417
consensus_10867#1      TAAAAAGGGTCTTGTCGTAGGTAAAAGAAATCCTGGGTTTTTTTTCCTATCAGTATGTAT 379
consensus_10867#2      TAATTGGGAAGATGTAGTAGG--ATCTGATTGATTAGAAGTGGAATCTTTGGGAGAGTGT 292
                       ***   **    *** *****  *    * *  *  *   *     ** *  *   ** *

consensus_10867#0      TTATAAATGTATATAACGTATAGGTCATTTTGGTGTTATAATAAGACACAAAAGTCTCTT 477
consensus_10867#1      TTATAAATGTATATAACGTAT---------------------------CAAAAGTCTCTT 412
consensus_10867#2      TCACAGCAATCTAAGAGCTGT----------------------------GACTTTCGATT 324
                       * * *    * **  *  * *                             *   **  **

consensus_10867#0      TGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAA 537
consensus_10867#1      TGCAAACCAAAAAATGAATGTTAAAATTACTACTACCACTACTATTACTATTACTAGTAA 472
consensus_10867#2      ATCCGATCTATCAATTGAAGTGGAATGAACAAGTGTAGCTTGCTCCAAGGT-AGAATCAC 383
                         *  * * *  ***  * **  **   ** * *    **      *   * *  *  * 

consensus_10867#0      ACCTA-CACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATAT 596
consensus_10867#1      ACCTA-CACGTTAGACAAAACCATCCAAACTTATGTCTTGATAATAAACACTGCTGATAT 531
consensus_10867#2      ATTTAATATGCTCCTGTTAACATTTGGAACACATATC----------------------- 420
                       *  **  * * *      ***  *   ***  ** **                       

consensus_10867#0      ATAGAAAAACTTACAGAATTCTTGAGTAAGCATGGGTGCCACTCAAAAATATAAGCAACA 656
consensus_10867#1      ATAGAAAAACTTACAGAATTCTTGAGTAAGCATGGGTG---------------------- 569
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      AAGATTATATGGATAAGAATAGGGAATTCCTGCCTTTTTTACCGCACTTTTACGCTGACA 716
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      ACCATGTTATACAGTAAATAGTTGTGTTGGTATAAGAGGTGTGGTTCTGGAAAAAAAAAA 776
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      CTATAATGCAACATGTTTCATAAAATGAAAATACATTGGAATTCCAACGTGAGAAAAGTC 836
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      CCATAAGTAGGGGTAGATGATAATAATAATAGTAATAATAATCACAATAAAAAATGAAGC 896
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      AACAAATGCATAGAGATGGATTAGAATTGATTGACAATTACGACCTCTTAGTGTATTTAT 956
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      ATTCACAAAAAGATTAATGATAAACTTTGCAAAGACCATCGGTGTGCGAAGAAAATCAAA 1016
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      ATTAAAGGCATTGAATAAATATGAAAAAAAAAAACAAGTTGTGTTGTAGGAGGAGCTGAT 1076
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      ATCGTCTTAATATTGGTTTTGTCGTGAAAGGCGTGATGAAAATGAGAGGAATATATCAAA 1136
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      GGTTTAAAAAGATCCAAAATCCTGTCCATGATCTTACAGTTTTCGAATTTTAGGACAACG 1196
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      CACTTCTGGATTGGCGCGAGCTAGTTCAAGACGACCATTTGCTTGATAATCATAAGCACA 1256
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      CTCGTGCTGATCGGAATATCGATGTAATGAGCAGAACAGTCCATCGCAGCGGCAAGCGAA 1316
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      ACCTGTCAATCCAACACGCTTGCGACACCAAGTGCAACGATTGACGCCAAGAACGGGACG 1376
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      GGAAGCTGACAAGTCGGCTTTGGAAGTTTCTGCAGAGTCTGAGGGATTTGCCTTTCGTTT 1436
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      AAGTGTACGAGATAATTGGGAAGATGTAGTAGGATCTGATTGATTAGAAGTGGAATCTTT 1496
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      GGGAGAGTGTTCACAGCAATCTAAGAGCTGTGACTTTCGATTATCCGATCTATCAATTGA 1556
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      AGTGGAATGAACAAGTGTAGCTTGCTCCAAGGTAGAATCACATTTAATATGCTCCTGATA 1616
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      ACATTTGGAACACATATCTTTAAACCGAACACTTCCATAGAAGCCACAACCACGTTTACA 1676
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      CATATTCTTGTTTTCAGGTTTATTTTCCAGCTCTGATGTTTCGTTATTCATTCTTAAAAA 1736
consensus_10867#1      ------------------------------------------------------------
consensus_10867#2      ------------------------------------------------------------
                                                                                   

consensus_10867#0      CTATTAATGAAAGACAAACCCCTTGCCCG 1765
consensus_10867#1      -----------------------------
consensus_10867#2      -----------------------------


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)