These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10904#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 23 consensus length = 1914 fasta sequence [GCTAAGACAGAAATAGGAAAATAACTAGACACTAACCTCATAATCGATAAGCATATGAGTTGAAACGGTTTCTCACATGTTCACAATTAAATGACGACAAAATAAATAAAAGCCTTACTGATAATTACTGAATCTATAACTATACTCTTGAGAAGCAATATTCTAACCCTGGGTAGAATATACTGAGGATGGTAACGACACTACACAAATCTACTCAACTAACCCTAGACAATCATGCGTCAGTAAACTAGGTCTAAGCAAAGTCAGTTGTAAATGAAAGATCCTGCGGAGCAAATAGTGTTAGTAGTCTGCTAATTACTGTGCTTAAGTGAAGTGAGCAAAAACGTAGCTAAACTAAGTTCAGAGCTCCGAGGTTATCAGAATATCGTTGTAATTAAGTAACTAAATAAAAGAAAAAATATATCCCCCAATCCTAAATGTGTATGACAAGCTTGGTCTCAATTATACGTTTTAAGAAGAAAGCCAAATGAATAGTTATATAACTCAACGACCACGATTAACAAACTTTCAATGTCACAACTAAGTCATCACGGATCCACAAAACTTTAGTACTCATTCTGATCCTCATCATTTCTCTATGTATGCTAGCAAATACATATAGATGTTGCTTGGTATTAGTTAGTACTGAAAGCCCGGGTTGCGAAAACAGTCAGAGATGTTGGGTAATGTTTTCATCTAAACTAACAGTGAAAACGGGAAGAAAAATCAGCGAATTATATACTAGCATAAAAGGTTGTGGTACTCGTCCTTATCAGAAATAAAAGTCCGCAAGGTCGAAGTAACAGTTTAAAATGTACTACATTGTCTTACCAAGAGTAGCCACATATTTACTGAGGATTTCATTCAAAACACTATACTCTGAAGTCAAATCAACTGATAGAATGAAGACGTTGTTATTTCTATCTGTTCCACATTTTATAGTTTCCCGTGCAGACTGAAGTTTCTTCAGGTCTCGAGCGACGATTGTTACATCAGCACCGGCTCGGTAGAACAGCTTAGCGAGAGATAGACCGATCCCGCTTGATCCACCAGNTATTAAGACATTGAAGCCATGAAATGACTTTTTACTAACACGAATGTTGTTTCGCCAATTTAATAACAGGGCAGCAGNCAATACGAAGGCTGTAGCGGGTACGATNANAATCTACAAACGACTCAAAGTCAGCTAAATTCCATANCAGTTCAAAAAGTCGAAATTAAGAAATATTTTGTATTTGGACAAACTATGTTTTGAGTTTCAGACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTATTTTCATTGTTTTTAAAAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCCTTCAGACTCCTATAAT-GCATACGTAGGCCCTCGTGCCGAATTNTGGCCTCGGAG] [+] EMBL CD134883 [GCTAAGACAGAAATAGGAAAATAACTAGACACTAACCTCATAATCGATAAGCATATGAGTTGAAACGGTTTCTCACATGTTCACAATTAAATGACGACAAAATAAATAAAAGCCTTACTGATAATTACTGAATCTATAACTATACTCTTGAGAAGCAATATTCTAACCCTGGGTAGAATATACTGAGGATGGTAACGACACTACACAAATCTACTCAACTAACCCTAGACAATCATGCGTCAGTAAACTAGGTCTAAGCAAAGTCAGTTGTAAATGAAAGATCCTGCGGAGCAAATAGTGTTAGTAGTCTGCTAATTACTGTGCTTAAGTGAAGTGAGCAAAAACGTAGCTAAACTAAGTTCAGAGCTCCGAGGTTATCAGAATATCGTTGTAATTAAGTAACTAAATAAAAGAAAAAATATATCCCCCAATCCTAAATGTGTATGACAAGCTTGGTCTCAATTATACGTTTTAAGAAGAAAGCCAAATGAATAGTTATATAACTCAACGACCACGATTAACAAACTTTCAATGTCACAACTAAGTCATCACGGATCCACAAAACTNTAGTACTCATTCTGATCCTCATCATTTCTCTATGTATGCTAGCA ] [-] EMBL CD192432 [ ATAACTAGACACTAACCTCATAATTGATAAGCATATGAGTTGAAACGGTTTCTCACATGTTCACAATTAAATGACGACAAAATAAATAAAAGCCTTACTGATAATTACTGAATCTATAACTATACTCTTGAGAAGCAATATTCTAACCCTGGGTAGAATATACTGAGGATGGTAACGACACTACACAAATCTACTCAACTAACCCTAGACAATCATGCGTCAGTAAACTAGGTCTAAGCAAAGTCAGTTGTAAATGAAAGATCCTGCGGAGCAAATAGTGTTAGTAGTCTGCTAATTACTGTGCTTAAGTGAAGTGAGCAAAAACGTAGCTAAACTAAGTTCAGAGCTCCGAGGTTATCAGAATATCGTTGTAATTAAGTAACTAAATAAAAGAAAAAATATATCCCCCAATCCTAAATGTGTATGACAAGCTTGGTCTCAATTATACGTTTTAAGAAGAAAGCCAAATGAATAGTTATATAACTCAACGACCACGATTAACAAACTTTCAATGTCACAACTAAGTCATCACGGATCCACAAAACTTTAGTACTCATTCTGATCCTCATCATTTCTCTATGTATGCTAGCAA ] [+] EMBL CD202062 [ GTTATATAACTCAACGACCACGATTAACAAACTTTCAATGTCACAACTAAGTCATCACGGATCCACAAAACTTTAGTACTCATTCTGATCCTCATCATTTCTCTATGTATGCTAGCAAATACATATAGATGTTGCTTGGTATTAGTTAGTACTGAAAGCCCGGGTTGCGAAAACAGTCATAGATGTTGGGT GTGTTTTCATCTAAACTAACAGTGAAAACGGGAAGAAAAATCAGCGAATTATATACTAGCATAAAAGGTTGTGGTACTCGTCCTTATCAGAAATAAAAGTCCGCAAGGTCGAAGTAACAGTTTAAAATGTACTACATTGTCTTACCAAGAGTAGCCACATATTTACTGAGGATTTCATTCAAAACACTATACTCTGAAGTCAAATCAACTGATAGAATGAAGACGTTGTTATTTCTATCTGTTCCACATTTTATAGTTTCCCGTGCAGACTGAAGTTTCTTCAGGTCTCGAGCGACGATTGTTACATCAGCACCGGCTCGGTAGAACAGCTTAGCGAGAGATAGACCGATCCCGCTTGATCCACCAGNTATTAAGACATTGAAGCCATGAAATGACTTTTTACTAACACGAATGTTGTTTCGCCAATTTAATAACAGGGCAGCAGNCAATACGAAGGCTGTAGCGGGTACGATNANAATCTACAAACGACTCAAAGTCAGCTAAATTCCATANCA ] [+] EMBL CD095274 [ AGAGATGTTGGGTAATGTTTTCATCTAAACTAACAGTGAAAACGGGAAGAAAAATCAGCGAATTATATACTAGCATAAAAGGTTGTGGTACTCGTCCTTATCAGAAATAAAAGTCCGCAAGGTCGAAGTAACAGTTTAAAATGTACTACATTGTCTTACCAAGAGTAGCCACATATTTACTGAGGATTTCATTCAAAACGCTATACTCTGAAGTCAAATCAACTGATAGAATGAAGACGTTGTTATTTCTATCTGTTCCACATTTTATAGTTTCCCGTGCAGACTGAAGTTTCTTCAGGTCTCGAGCGACGATTGTTACATCAGCACCGGCTCGGTAGAACAGCTTAGCGAGAGATAGACCG ] [+] EMBL CD095106 [ AGAGATGTTGGGTAATGTTTTCATCTAAACTAACAGTGAAAACGGGAAG AAAATCAGCGAATTATATACTAGCATAAAAGGTTGTGGTACTCGTCCTTATCAGAAATAAAAGTCCGCAAGGTCGAAGTAACAGTTT AAATGTACTACATTGTCTTACCAAGAGTAGCCACATATTTACTGAGGATTTCATTCAAAACACTATACTCTGAAGTCAAATCAACTGATAGAATGAAGACGTTGTTATTTCTATCTGTTCCACATTTTATAGTTTCCCGTGCAGACTGAAGTTTCTTCAGGTCTCGAGCGACGATTGTTACATCAGCACCGGCTCGGTAGAACAGCTTAGCGAGAGATAGACCG ] [-] EMBL CD094993 [ GAGATGTTGGGTAATGTTTTCATCTAAACTAACAGTGAAAACGGGAAGAAAAATCAGCGAATTATATACTAGCATAAAAGGTTGTGGTACTCGTCCTTATCAGAAATAAAAGTCCGCAAGGTCGAAGTAACAGTTTAAAATGTACTACATTGTCTTACCAAGAGTAGCCACCTATTTACTGAGGATTTCATTCAAAACACTATACTCTGAAGTCAAATCAACTGATAGAATGAAGACGTTGTTATTTCTATCTGTTCCACATTTTATAGTTTCCCGTGCAGACTGAAGTTTCTTCAGGTCTCGAGCGACGATTGTTACATCAGCACCGGCTCGGTAGAACAGCTTAGCGAGAGATAGACCGA ] [+] EMBL CD153759 [ ATCTGTTCCACATTTTATAGTTTCCCGTGCAGACTGAAGTTTCTTCAGGTCTCGAGCGACGATTGTTACATCAGCACCGGCTCGGTAGAACAGCTTAGCGAGAGATAGACCGATCCCGCTTGACCCACCAGTAATTAAGACATTGAAGCCATGAAATGACTTTTTACTAACACGATTGTTGTTTCGCCAATTTAATAACAGGCAAGCAGCAAATACGAAGGCTGTAGCGGTAACGATAAAAATCTACAAACGACTCAAAGTCAGCTAAATTCCATACAAGTTCAAAAAGTCGAAATTAAGAAATATTTTGTATTTGGACAAACTATGTTTTGAGTTTCAGACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTATTTTCATTGTTTTTACAAGAAGTGGAAGGTTCGTACTTCTCTAGTACAGGTACATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAG ] [-] EMBL CD081383 [ TTTGTATTTGGACAAACTATG TTTGAGTTTCAGACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTATTTTCATTGTTTTTAAAAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCCTTCAGACTCCTATAAT GCATACGTAGGCCCTCGTGCCGAATTNTGGCCTCGGAG] [+] EMBL CD075217 [ TTTGTATTTGGACAAACTATGTTTTGAGTTTCAGACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTATTTTCATTGTTTTTAAAAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAGCCGC ] [+] EMBL CD073106 [ TTTGTATTTGGACAAACTATGTTTTGAGTTTCAAACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTATTTTCATTGTTTTTAAAAAAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAAATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAAACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAACTTTTTTGCAAAGTGTATATCACTTATGTG ] [+] EMBL AW017283 [ TTTGTATTTGGACAAACTATGTTTTGAGTTTCAGACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTATTTTCATTGGTTTTAAAAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGGTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACCAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAAT ] [-] EMBL BF936778 [ GACAAACTATGTTTTGAGTTTCAGACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTATTTTCATTGTTTTTAAAAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCCTTCAGACTCCTATAATGGCATACGT ] [-] EMBL CD160194 [ TTGAGTTTCAGACCATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACCAAGGTTATTTTCATTGTTTTTAAGAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGGATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCA ] [-] EMBL CD083409 [ aAAAAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACA TCAGGAA AATTTAGCCGCGAATTCCTTCctc ] [-] EMBL AI975240 [ GAAGGTTCGTACTTCTCTAGTAAAGGGAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCCTTCAGACTCCTATAAT GCATACGT ] [+] EMBL CD178728 [ CTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTA ] [+] EMBL CD178925 [ CTCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGGATGTAGTACACTGTAGACTTATATCCTCGACATCTANAGACATTCAGGAAATAATTTA ] [-] EMBL CD178546 [ TCTAGTAAAGGTAAATGAATAGAGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCCCTTGTGACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAG ] [-] EMBL CD192575 [ GAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTACATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTG ] [-] EMBL AI068187 [ ATGAATTACGGCGTCCGAAGCCTCACATGCTTCGTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTCTATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGTGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATA ] [-] EMBL AI068155 [ GCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATA ] [-] EMBL CD078130 [ TGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAGCCGCGAATTC ] [-] EMBL AI066974 [ CATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTNTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATA ] consensusID : consensus_10904#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 639 fasta sequence [GTTGGGACAACTTGTTTGGGTTCAGCAAAGATTTTAAATCCATTTTGAAGATCATTTTCAAGATAGGGTATTTTCTGGTTTTAAAGAAGGGAAGTTCGTCTTCTTTAGTAAGGTTAATGATAGAGNCATCATAATGTTCTAAAGCCCAGATAGATCGGAGAGTGGTGGCGACCTTCNAGTACATAAGGATGAATTACGGCGTCCGAAGCNTCACATGCTTCCNTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATTTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCCTTCAGACTCCTATAATGCATACGTAAGCTACAAACTAG] [-] EMBL CD078642 [GTTGGGACAACTTGTTTGGGTTCAGCAAAGATTTTAAATCCATTTTGAAGATCATTTTCAAGATAGGGTATTTTCTGGTTTTAAAGAAGGGAAGTTCGTCTTCTTTAGTAAGGTTAATGATAGAGNCATCATAATGTTCTAAAGCCCAGATAGATCGGAGAGTGGTGGCGACCTTCNAGTACATAAGGATGAATTACGGCGTCCGAAGCNTCACATGCTTCCNTGCAAAGACGTCCATTGTGCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTGGATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATATCACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTTTCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGTATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACACTGTAGACTTATATCCTCGACATTTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCCTTCAGACTCCTATAATGCATACGTAAGCTACAAACTAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10904#0 GCTAAGACAGAAATAGGAAAATAACTAGACACTAACCTCATAATCGATAAGCATATGAGT 60 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 TGAAACGGTTTCTCACATGTTCACAATTAAATGACGACAAAATAAATAAAAGCCTTACTG 120 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 ATAATTACTGAATCTATAACTATACTCTTGAGAAGCAATATTCTAACCCTGGGTAGAATA 180 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 TACTGAGGATGGTAACGACACTACACAAATCTACTCAACTAACCCTAGACAATCATGCGT 240 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 CAGTAAACTAGGTCTAAGCAAAGTCAGTTGTAAATGAAAGATCCTGCGGAGCAAATAGTG 300 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 TTAGTAGTCTGCTAATTACTGTGCTTAAGTGAAGTGAGCAAAAACGTAGCTAAACTAAGT 360 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 TCAGAGCTCCGAGGTTATCAGAATATCGTTGTAATTAAGTAACTAAATAAAAGAAAAAAT 420 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 ATATCCCCCAATCCTAAATGTGTATGACAAGCTTGGTCTCAATTATACGTTTTAAGAAGA 480 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 AAGCCAAATGAATAGTTATATAACTCAACGACCACGATTAACAAACTTTCAATGTCACAA 540 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 CTAAGTCATCACGGATCCACAAAACTTTAGTACTCATTCTGATCCTCATCATTTCTCTAT 600 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 GTATGCTAGCAAATACATATAGATGTTGCTTGGTATTAGTTAGTACTGAAAGCCCGGGTT 660 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 GCGAAAACAGTCAGAGATGTTGGGTAATGTTTTCATCTAAACTAACAGTGAAAACGGGAA 720 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 GAAAAATCAGCGAATTATATACTAGCATAAAAGGTTGTGGTACTCGTCCTTATCAGAAAT 780 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 AAAAGTCCGCAAGGTCGAAGTAACAGTTTAAAATGTACTACATTGTCTTACCAAGAGTAG 840 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 CCACATATTTACTGAGGATTTCATTCAAAACACTATACTCTGAAGTCAAATCAACTGATA 900 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 GAATGAAGACGTTGTTATTTCTATCTGTTCCACATTTTATAGTTTCCCGTGCAGACTGAA 960 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 GTTTCTTCAGGTCTCGAGCGACGATTGTTACATCAGCACCGGCTCGGTAGAACAGCTTAG 1020 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 CGAGAGATAGACCGATCCCGCTTGATCCACCAGNTATTAAGACATTGAAGCCATGAAATG 1080 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 ACTTTTTACTAACACGAATGTTGTTTCGCCAATTTAATAACAGGGCAGCAGNCAATACGA 1140 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 AGGCTGTAGCGGGTACGATNANAATCTACAAACGACTCAAAGTCAGCTAAATTCCATANC 1200 consensus_10904#1 ------------------------------------------------------------ consensus_10904#0 AGTTCAAAAAGTCGAAATTAAGAAATATTTTGTATTTGGACAAACTATGTTTTGAGTTTC 1260 consensus_10904#1 ---------------------------------GTTGGGACAACTTGT---TTGGGTTC- 23 ** ****** * * *** *** consensus_10904#0 AGACAATAGATTCTTAAATATCATCATCTGAAAGATCATATTCTACAAGACTAAGGTTAT 1320 consensus_10904#1 -AGCAA-AGATT-TTAAAT----CCATTTTGAAGATCATTTTC---AAGAT--AGGGTAT 71 *** ***** ****** *** * ******** *** **** *** *** consensus_10904#0 TTTCATTGTTTTTAAAAGAAGTGGAAGGTTCGTACTTCTCTAGTAAAGGTAAATGAATAG 1380 consensus_10904#1 TTTC--TGGTTTTAAAGAA---GGGAAGTTCGT-CTTCTTTAGTAA-GGTTAATGA-TAG 123 **** ** ******* * ** * ****** ***** ****** *** ***** *** consensus_10904#0 AGACATCATAATGTTCTGAAAGCCCAGATAGATCGGAGAGTGGTTGGCGACCCTTCAGTA 1440 consensus_10904#1 AGNCATCATAATGTTCT-AAAGCCCAGATAGATCGGAGAGTGGT-GGCGACCTTCNAGTA 181 ** ************** ************************** ******* * **** consensus_10904#0 CATAAGGATGAATTACGGCGTCCGAAGCCTCACATGCTTCCTTGCAAAGACGTCCATTGT 1500 consensus_10904#1 CATAAGGATGAATTACGGCGTCCGAAGCNTCACATGCTTCCNTGCAAAGACGTCCATTGT 241 **************************** ************ ****************** consensus_10904#0 GCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTG 1560 consensus_10904#1 GCAAGTAATTGTTCTTTATCACATCAAGAGAGCAAAGAATCGACTTTATCTGATGATCTG 301 ************************************************************ consensus_10904#0 GATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATAT 1620 consensus_10904#1 GATACGAAGTACATGTAGCCTGTCCCAGCAAACTTTCTAGCTTCTTTGCAAAGTGTATAT 361 ************************************************************ consensus_10904#0 CACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTT 1680 consensus_10904#1 CACTTATGTGCTTGAATGCAGCATCACAAATATTGCGTTTGTGTGTAGTAACTTTGTTTT 421 ************************************************************ consensus_10904#0 TCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGT 1740 consensus_10904#1 TCAAGGTGACCAATCTATTCAGTTGACCGAGTTTGGCTCTCTTGTAACCAGTCATTAAGT 481 ************************************************************ consensus_10904#0 ATGCGAATGAAATACTCAATATCAGACAGACATTGATCCTTACTTCAAGAATGTAGTACA 1800 consensus_10904#1 ATGCGAATGAAATACTCAATATCAGACCGACATTGATCCTTACTTCAAGAATGTAGTACA 541 *************************** ******************************** consensus_10904#0 CTGTAGACTTATATCCTCGACATCTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCC 1860 consensus_10904#1 CTGTAGACTTATATCCTCGACATTTAAAGACATTCAGGAAATAATTTAGCCGCGAATTCC 601 *********************** ************************************ consensus_10904#0 TTCAGACTCCTATAATGCATACGTAGGCCCTCGTGCCGAATTNTGGCCTCGGAG 1914 consensus_10904#1 TTCAGACTCCTATAATGCATACGTAAGCTA-CAAACTAG--------------- 639 ************************* ** * * |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||