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Schistosoma mansoni
cluster # 10919 cluster # 10919       Sequences # 25       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10919#0 length = 1653 sequences # 12  
consensus_10919#1 length = 1143 sequences # 4  
consensus_10919#2 length = 1061 sequences # 6  
consensus_10919#3 length = 515 sequences # 2  
consensus_10919#4 length = 481 sequences # 1  

consensusID : consensus_10919#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1653
fasta sequence
                              [CTCTACAAATAGAGAAACGCTCATATGAGCACATGTGCACACATCACCGCTAATTAACAATCAGAAAAGAAACAATTAGTGACTAAAATTATATACTCATCAGAACGACAATAATAATCATTGAGTGATAAGAACGCATGTAGTGTTAGTGTAACAATAAAGATGAATTTGACTGTCATATTAGTTAAATGTTTCATTGAATTTTGTTTGTTTTGTTTCCTATTTACGGAGAAAAATGGTCATGACAACAGAGTAGAAGGTGTAAAATGAGTAAACACAGCTAGCAACCATATAACGTTAGCTCTTTTATTCAAGTAGATATAGTAAGAAGAAGAAGAATTCGATATTAAACCAGACTAGCTAATTAGGAAAATATAAAAGCAAATAACAATGACTAAACACGGAACATACACATACACGACGTAACGAAACTCATTTGTACACTCATACACCATGATGATGAAAATACCGAAATCAAAGATCAAGTTATCGTTGAAAAAAAGACGAGTATGAAATAATAAATGGTAGTAAGTACAAGAATGGAGGGCACCAATAGACGTGCTGTTTAATAGAAAGTACCTCTACTGTTGTTATTTATTTAATAAGAAATGGTATAGAAGTATTAAAGTTGGTTAACACAATTAATTTTACTGTGAATAAACATACACAACACAAAGTACTGAATTAAGAACACGTAAACAATGTCATCAAACGGAATGAGAAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGATCTTCCATAACAGCGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTAACTGACTCATTTGTATTAGATGTTGAGTTTGGTAGACTGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTGTTTGCTGTTGAGTGGGTGTAGATGAGGGACGACCTGGTAAAACACCTGTAGCGTTAATTGGCCTATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGACGATTGAAGTACCGATTGTTGTTGACTAGACAAACTGGAGTGAGGAACGGAAACAGGAGGAGGAAAAATAACTGTTGCAGGAGAATGACCACTGTGAATTGCTGCCTGATTGGGTGCTGTATTAGGAAATATAGTTGAACCAGAAGTTAACAGTTGTGAAGCCTGATGGCCATGAGTTGGTATATTAGTTGCAAACGCAATATGTGTTGCTTGCCCCGACTGCAAATGAACCTGATGACCCACTAAATGTGCAGCTGAATGATGTGGATTAATAATTGTTCCCTGTGGGTGAGAAGTGGGAATAGAAGTTAGAGTAAACTGTTGTCCAGGTTCTAGAGTGAGTCGAGGATCCAGCGGTTCCAAATAGACAGTATCTCCACCAACAGAATTCAATATAAATCCACCATCAGGTCCAGCGGTAGCTAAAGTAGCAGTACATGATCGATCCAATTCACCTGTTGGTGTAACAAAAGCAACTGAAGTTTGTCTGAGCTGCTTCACCATGATGA]

[+] EMBL CD063232             [CTCTACAAATAGAGAAACGCTCATATGAGCACATGTGCACACATCACCGCTAATTAACAATCAGAAAAGAAACAATTAGTGACTAAAATTATATACTCATCAGAACGACAATAATAATCATTGAGTGATAAGAACGCATGTAGTGTTAGTGTAACAATAAAGATGAATTTGACTGTCATATTAGTTAAATGTTTCATTGAATTTTGTTTGTTTTGTTTCCTATTTACGGAGAAAAATGGTCATGACAACAGAGTAGAAGGTGTAAAATGAGTAAACACAGCTAGCAACCATATAACGTTAGCTCTTTTATTCAAGTAGATATAGTAAGAAGAAGAAGAATTCGATATTAAACCAGACTAGCTAATTAGGAAAATATAAAAGCAAATAACAATGACTAAACACGGAACATACACATACACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD096468             [                                                                                                                                                                                                                                                                                  ACACAGCTAGCAACCATATAACGTTAGCTCTNTTATTCAAGTAGATATAGTAAGAAGAAGAAGAATTCGATATTAAACCAGACTAGCTAATTAGGAAAATATAAAAGCAAATAACAATGACTAAACACGGAACATACACATACACGACGTAACGAAACTCATTTGTACACTCATACACCATGATGATGAAAATACCGAAATCAAAGATCAAGTTATCGTTGAAAAAAAGACGAGTATGAAATAATAAATGGTAGTAAGTACAAGAATGGAGGGCACCAATAGACGTGCTGTTTAATAGAAAGTACCTCTACTGTTGTTATTTATTTAATAAGAAATGGTATAGAAGTATTAAAGTTGGTTAACACAATTAATTTTACTGTGAATAAACATACACAACACAAAGTACTGAATTAAGAACACGTAAACAATGTCATCAAACGGAATGAGAAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD135305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATTTAATAAGAAATGGTATAGAAGTATTAAAGTTGGTTAACACAATTAATTTTACTGTGAATAAACATACACAACACAAAGTACTGAATTAAGAACACGCAAACAATGTCATCAAACGGAATGAGAAACAAAAATGAAGCTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGATCTTCCATAACAGCGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTAACTGACTCATTTGTATTAGATGTTGAGTTTGGTAGACTGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CD199321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAAGAAATGGTATAGAAGTATTAGAGTTGGTTCACACAATTAATTTTACTGTGAATAAACATACACAACACAAAGTACTGAATTAAGAACACGTAAACAATGTCATCAAACGGAATGAGAAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD135352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTCATCAAACGGAATGAGAAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGATCTTCCATAACAGCGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTAACTGACTCATTTGTATTAGATGTTGAGTTTGGTAGACTGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTGTTTGCTGTTGAGTGGGTGTAGAc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD183056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTAAGATCTTTCATAACAGCGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTAACTGACTCATTTGTATTAGATGTTGAGTTTGGTAGACTGGATGTTGCATTAACAGGTGGTGAATGTACTATAGGTACAAGCATTGCTGTTTGCTGTTTAGTGGGTGTAGATTAAGGACCACCTGGTAAAACACCTGTAGCGTTAATTGGCCTATGATAATGTAATAACTGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD178764             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTAACTGACTCATTTGTATTAGATGTTGAGTTTGGTAGACTGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTGTTTGCTGTTGAGTGGGTGTAGATGAGGGACGACCTGGTAAAACACCTGTAGCGTTAATTGGCCTATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGACGATTGAAGTACCGATTGTTGTTGACTAGACAAACTGGAGTGAGGAACGGAAACAGGAGGAGGAAAAATAACTGTTGCAGGAGAATGACCACTGTGAATTGCTGCCTGATTGGGTGCTGTATTAGGAAATATAGTTGAACCAGAAGTTAACAGTTGTGAAGCCTGATGGCCATGAGTTGGTATATTAGTTGCAAACGC                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD163851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTAGATGTTGAGTTTGGTAGACTGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTGTTTGCTGTTGAGTGGGTGTAGATGAGGGACGACCTGGTAAAACACCTGTAGCGTTAATTGGCCTATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGACGATTGAAGTACCGATTGTTGTTGACTAGACAAACTGGAGTGAGGAACGGAAACAGGAGGAGGAAAAATAACTGTTGCAGGAGAATGACCACTGTGAATTGCTGCCTGATTGGGTGCTGTATTAGGAAATATAGTTGAA CAGAAGTTAACAGTTGTGAAGCCTGATGGCCATGAGTTGGTATATTAGTTGCAAACGCAATATGTGTTGCTTGCCCCGACTGCAAATGAACCTGATGACCCACTAAATGTGCAGCTGAATGAT                                                                                                                                                                                                                                                      ]
[-] EMBL CD183656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTAGCGTTAATTGGCCTATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGACGATTGAAGTACCGATTGTTGTTGACTAGACAAACTGGAGTGAGGAACGGAAACAGGAGGAGGAAAAATAACTGTTGCAGGAGAATGACCACTGTGAATTGCTGCCTGATTGGGTGCTGTATTAGGAAATATAGTTGAACCAGAAGTTAACAGTTGTGAAGCCTGATGGCCATGAGTTGGTATATTAGTTGCAAACGCAATATGTGTTGCTTGCCCCGACTGCAAATGAACCTGATGACCCACTAAATGTGCAGCTGAATGATGTGGATTAATAATTGTTCCCTGTGGGTGAGAAGTGGGAATAGAAGTTAGAGTA                                                                                                                                                                                                 ]
[+] EMBL CD114103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAAACGCAATATGTGTTGCTTGCCCCGACTGCAAATGAACCTGATGACCCACTAAATGTGCAGCTGAATGATGTGGATTAATAATTGTTCCCTGTGGGTGAGAAGTGGGAATAGAAGTTAAAGTAAACTGTTGTCCAGGTTCTAGAGTGAGTCGAGGATCCAGCGGTTCCAAATAGACAGTATCTCCACCAACAGAATTCAATATAAATCCACCATCAGGTCCAGCGGTAGCTAAAGTAGCAGTACATGATCGATCCAATTCACCTGTTGGTGTAACAAAAGCAACTGAAGTTTGTCTGAGCTGCTTCACCATGATGA]
[-] EMBL CD163789             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATGACCCACTAAATGTGCAGCTGAATGGTGTGGATTAATAATTGTTCCCTGTGGGTGAGAAGTGGGAATAGAAGTTAGAGTAAACTGTTGTCCAGGTTCTAGAGTGAGTCGAGGATCCAGCGGTTCCAAATAGACAGTATCTCCACCAACAGAATTCAATATAAATCCACCATCAGGTg                                                                                                ]
[-] EMBL CD181200             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATGTGCAGCTGTATGATGTGGATTAATAATTGTTCCCTGTGGGTGAGAAGTGGGAATAGAAGTTAGAGTAAACTGTTGTCCAGGTTCTAGAGTGAGTCGA                                                                                                                                                                   ]


>consensus_10919#0 CTCTACAAATAGAGAAACGCTCATATGAGCACATGTGCACACATCACCGCTAATTAACAA TCAGAAAAGAAACAATTAGTGACTAAAATTATATACTCATCAGAACGACAATAATAATCA TTGAGTGATAAGAACGCATGTAGTGTTAGTGTAACAATAAAGATGAATTTGACTGTCATA TTAGTTAAATGTTTCATTGAATTTTGTTTGTTTTGTTTCCTATTTACGGAGAAAAATGGT CATGACAACAGAGTAGAAGGTGTAAAATGAGTAAACACAGCTAGCAACCATATAACGTTA GCTCTTTTATTCAAGTAGATATAGTAAGAAGAAGAAGAATTCGATATTAAACCAGACTAG CTAATTAGGAAAATATAAAAGCAAATAACAATGACTAAACACGGAACATACACATACACG ACGTAACGAAACTCATTTGTACACTCATACACCATGATGATGAAAATACCGAAATCAAAG ATCAAGTTATCGTTGAAAAAAAGACGAGTATGAAATAATAAATGGTAGTAAGTACAAGAA TGGAGGGCACCAATAGACGTGCTGTTTAATAGAAAGTACCTCTACTGTTGTTATTTATTT AATAAGAAATGGTATAGAAGTATTAAAGTTGGTTAACACAATTAATTTTACTGTGAATAA ACATACACAACACAAAGTACTGAATTAAGAACACGTAAACAATGTCATCAAACGGAATGA GAAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCAC CCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAAT CTGTATGATCTTCCATAACAGCGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATG TTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTAACTGACTCAT TTGTATTAGATGTTGAGTTTGGTAGACTGGATGTTGCATTAACAGGTGGTGTATGTACTA TAGGTACAAGCATTGCTGTTTGCTGTTGAGTGGGTGTAGATGAGGGACGACCTGGTAAAA CACCTGTAGCGTTAATTGGCCTATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCG TAGACGATTGAAGTACCGATTGTTGTTGACTAGACAAACTGGAGTGAGGAACGGAAACAG GAGGAGGAAAAATAACTGTTGCAGGAGAATGACCACTGTGAATTGCTGCCTGATTGGGTG CTGTATTAGGAAATATAGTTGAACCAGAAGTTAACAGTTGTGAAGCCTGATGGCCATGAG TTGGTATATTAGTTGCAAACGCAATATGTGTTGCTTGCCCCGACTGCAAATGAACCTGAT GACCCACTAAATGTGCAGCTGAATGATGTGGATTAATAATTGTTCCCTGTGGGTGAGAAG TGGGAATAGAAGTTAGAGTAAACTGTTGTCCAGGTTCTAGAGTGAGTCGAGGATCCAGCG GTTCCAAATAGACAGTATCTCCACCAACAGAATTCAATATAAATCCACCATCAGGTCCAG CGGTAGCTAAAGTAGCAGTACATGATCGATCCAATTCACCTGTTGGTGTAACAAAAGCAA CTGAAGTTTGTCTGAGCTGCTTCACCATGATGA



consensusID : consensus_10919#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1143
fasta sequence
                              [TTAAAAGAAACAGGGGGGGGGAACTATTACACAACTGATAAAAACAAAATGAAGATAGAAAGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAGTTTACATGTATTGATAATGTGAATATACACAAACTAACACACACGTACATACATAAGCAGCTTCATGTAAACATGAATGAGGAAGGGGGGAGGAGAGGAAAAAGACAACTGGGAATATTGGTAATCAGATGATTAAGCAGAAAGAATTAAGGAAAGAGAGAAAATTAACATGTAAGATTCATATTGACAGTTACATTTATAAGTGTATATGCTTCAATATATATATGCGTGTGTAACGGGTGGAGGGGGGGAGTAAACAAACACTCCTACAATAATTCTGATAAAGATTTTTCCCCTCAAAAATATCTAAGACTTGCTCATTTCACAGCATCGACACGACGCACGATGAATAATTCGCCCAAAGTAGGATTGCTGAAGAGTAGTAGTAGTATTAGCAGTAGTAGTAGGCGTACCTAAATATTTTTAGCAAAGCATAATGCAGTACGGAGGCGGCAGTATACTCAACTTGTATGTGTGCATATACGTTTGAATATGCACAAGTTTATTTATGATTAGCAAAAATATAGAGAATAACTAAATTGATGTAAAGGGTGGGGGTGTATAGCGCAGAAAAAAGAACTTTGATGGAGAAAAAAAACATAATTAATCAACAACAACTTAGTTGCTGAGTGAAATCATAAATTCGTTAGCCAAAAAAAGGAATACTGTTAATTTGTTTTTTCTTTTAAAAAAATAAGGAAACTAAGCCAAAAGAGGAAGAAAAAGCACTGGCACTGGTGAATACACACACATACATAAAAGAAGAAATTACATAATCGGGTCCTGTTTCTTTTTATTCTGATTGTTAATTAGCGGTGATGTGTGCACATGTGCTCATATGAGCGTTTCTCTATTTGTGTGTTTGTCTATACATCATGTAAACTAAATGCAACCTGGATGAATATGTAGATATAAGGAAACATTTTTTGCTTTTCCCCCTACATTATTTCATCATTAATCCATATTGTGTATTGTATAANAAACAAACTAATATACTTTTTTTTTCTCATTTTATTTCATTAATTTAAAACTTTTCGTTTATTA]

[+] EMBL CD132672             [TTAAAAGAAACAGGGGGGGGGAACTATTACACAACTGATAAAAACAAAATGAAGATAGAAAGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAGTTTACATGTATTGATAATGTGAATATACACAAACTAACACACACGTACATACATAAGCAGCTTCATGTAAACATGAATGAGGAAGGGGGGAGGAGAGGAAAAAGACAACTGGGAATATTGGTAATCAGATGATTAAGCAGAAAGAATTAAGGAAAGAGAGAAAATTAACATGTAAGATTCATATTGACAGTTACATTTATAAGTGTATATGCTTCAATATATATATGCGTGTGTAACGGGTGGAGGGGGGGAGTAAACAAACACTCCTACAATAATTCTGATAAAGATTTTTCCCCTCAAAAATATCTAAGACTTGCTCATTTCACAGCATCGACACGACGCACGATGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD082951             [                                                                                                                                                                                                                                                                                                                                                         GGGGGAGTAAACAAACACTCNTACAATAATTCTGATAAAGATTTTTCCCCTCAAAAATATCTAAGACTTGCTCATTTCACAGCATCGACACGACGCACGATGAATAATTCGCCCAAAGTAGGATTGCTGAAGAGTAGTAGTAGTATTAGCAGTAGTAGTAGGCGTACCTAAATATTTTTAGCAAAGCATAATGCAGTACGGAGGCGGCAGTATACTCAACTTGTATGTGTGCATATACGTTTGAATATGCACAAGTTTATTTATGATTAGCAAAAATATAGAGAATAACTAAATTGATGTAAAGGGTGGGGGTGTATAGCGCAGAAAAAAGAACTTTGATGGAGAAAAAAAACATAATTAATCAACAACAACTTAGTTGCTGAGTGAAATCATAAATTCGTTAGCCAAAAAAAGGAATACTGTTAATTTGTTTTTTCTTTTAAAAAAATAAGGAAACTAAGCCAAAAGAGGAAGAAAAAGCACTGGCACTGGTGAATACACACACATACATAAAAGAAGAAATTACATAATCGGGTCCTGTTTCTTTTcct                                                                                                                                                                                                                                                       ]
[+] EMBL CD096133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCATATACGTTTGAATATGCACAAGTTTATTTATGATTAGCAAAAATATAGAGAATAACTAAATTGATGTAAAGGGTGGGGGTGTATAGCGCAGAAAAAAGAACTTTGATGGAGAAAAAAAACATAATTAATCAACAACAACTTAGTTGCTGAGTGAAATCATAAATTCGTTAGCCAAAAAAAGGAATACTGTTAATTTGTTTTTTCTTTTAAAAAAATAAGGAAACTAAGCCAAAAGAGGAAGAAAAAGCACTGGCACTGGTGAATACACACACATACATAAAAGAAGAAATTACATAATCGGGTCCTGTTTCTTTTTATTCTGATTGTTAATTAGCGGTGATGTGTGCACATGTGCTCATATGAGCGTTTCTCTATTTGTGTGTTTGTCTATACATCATGTAAACTAAATGCAACCTGGATGAATATGTAGATATAAGGAAACATTTTTTGCTTTTCCCCCTACATTATTTCATCATTAATCCATATTGTGTATTGTATAANAAACAAACTAATATACTTTTTTTTTCTCATTTTATTTCATTAATTTAAAACTTTTCGTTTATTA]
[+] EMBL CD096128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCATATACGTTTGAATATGCACAAGTTTATTTATGATTAGCAAAAATATAGAGAATAACTAAATTGATGTAAAGGGTGGGGGTGTATAGCGCAGAAAAAAGAACTTTGATGGAGAAAAAAAACATAATTAATCAACAACAACTTAGTTGCTGAGTGAAATCATAAATTCGTTAGCCAAAAAAAGGAATACTGTTAATTTGTTTTTTCTTTTAAAAAAATAAGGAAACTAAGCCAAAAGAGGAAGAAAAAGCACTGGCACTGGTGAATACACACACATACATAAAAGAAGAAATTACATAATCGGGTCCTGTTTCTTTTTATTCTGATTGTTAATTAGCGGTGATGTGTGCACATGTGCTCATATGAGCGTTTCTCTATTTGTGTGTTTGTCTATACATCATGTAAACTAAATGCAACCTGGATGAATATGTAGATATAAGGAAACATTTTTTGCTTTTCCCCCTACATTATTTCATCATTAATCCATATTGTGTATTGTATAAAAAACAAACTAATATACTTTNTTTTTCTCATTNTATTTCATTAATTTAA                ]


>consensus_10919#1 TTAAAAGAAACAGGGGGGGGGAACTATTACACAACTGATAAAAACAAAATGAAGATAGAA AGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAGTTTACATGTATTGATAATGTG AATATACACAAACTAACACACACGTACATACATAAGCAGCTTCATGTAAACATGAATGAG GAAGGGGGGAGGAGAGGAAAAAGACAACTGGGAATATTGGTAATCAGATGATTAAGCAGA AAGAATTAAGGAAAGAGAGAAAATTAACATGTAAGATTCATATTGACAGTTACATTTATA AGTGTATATGCTTCAATATATATATGCGTGTGTAACGGGTGGAGGGGGGGAGTAAACAAA CACTCCTACAATAATTCTGATAAAGATTTTTCCCCTCAAAAATATCTAAGACTTGCTCAT TTCACAGCATCGACACGACGCACGATGAATAATTCGCCCAAAGTAGGATTGCTGAAGAGT AGTAGTAGTATTAGCAGTAGTAGTAGGCGTACCTAAATATTTTTAGCAAAGCATAATGCA GTACGGAGGCGGCAGTATACTCAACTTGTATGTGTGCATATACGTTTGAATATGCACAAG TTTATTTATGATTAGCAAAAATATAGAGAATAACTAAATTGATGTAAAGGGTGGGGGTGT ATAGCGCAGAAAAAAGAACTTTGATGGAGAAAAAAAACATAATTAATCAACAACAACTTA GTTGCTGAGTGAAATCATAAATTCGTTAGCCAAAAAAAGGAATACTGTTAATTTGTTTTT TCTTTTAAAAAAATAAGGAAACTAAGCCAAAAGAGGAAGAAAAAGCACTGGCACTGGTGA ATACACACACATACATAAAAGAAGAAATTACATAATCGGGTCCTGTTTCTTTTTATTCTG ATTGTTAATTAGCGGTGATGTGTGCACATGTGCTCATATGAGCGTTTCTCTATTTGTGTG TTTGTCTATACATCATGTAAACTAAATGCAACCTGGATGAATATGTAGATATAAGGAAAC ATTTTTTGCTTTTCCCCCTACATTATTTCATCATTAATCCATATTGTGTATTGTATAANA AACAAACTAATATACTTTTTTTTTCTCATTTTATTTCATTAATTTAAAACTTTTCGTTTA TTA



consensusID : consensus_10919#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1061
fasta sequence
                              [GTGTATATTACAGT-CAATA-TA-TA-TAAT-ATTG-AAT-AACGAGT-ATCATA-AAG-TTTCG-TTG-TTTTTTTC-TAAATCAGTGC-ACAAAAAAACGTGGAGNAAGNAATATTTGATCGGTCAATGATTAAATGGGGGTAGTAGTAGTATGAGTAGTAGTTAAGAGAGATTATTCTCGAAAGGGGGTGTGTTTTATACTCATTAAAAAGGGGAAGAGTGAAGAATCAATAGTAATTATAGTACCAATAATAATAATAGTAATAGTATTAGTTGTTGTAATAATAGTAGTGAAACGAACGTTGTTTACCTCAGAGCAGCAGTAATAATAATCATTATCATTGTAATAATAATA--ATAATAATAAGATTGGTAAGTAATAGGTAGTTAACCAATTCATTTTCAATCTGTTTTCCATTTATCCACCCCTTCACTCACTCACACACACATATATAGAGTTCCTCTTGTGAACCCATGGTAACTCATGAGCATACACACAAGAAGGGTATAAAGTATAAGAGTCTAAAAATTAAATCAACTACTTTAGCCAAATATGAATCCATTGTGTTTATGTGAGTATTCATTCAAATGATTGAACATTGAACAACAGGTATATATTGACACATTGAATACATAGATATATACCTGTATTTGAGCAAGAGGATAGTACACATGATAGTATTAAGGAAATAGATTGAATTCATGTGTTTGTGAAAAAAAAGAAGGCAACCAATTTGAGTTCATATATATAGATTGTTAATAATCACCATAGTTATTATAAAATTAATTGAACTACGATAACCCTGGTAACAGCACTTAAAAGAAACA-GGGGGGGGAACTATTACACAACTGATAAAAACAAAATGAAGATAGAAAGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAGTTTACATGTATTGATAATGTGAATATACACAAACTAACACACACGTACATACATAAGCAGCTTCATGTAAACATGAATGAGGAAGGGGGGAGGAGAGGAAAAAGACAACTGGGAATATTGGTAATCAGATGATNTAAGCAGACGCTCGTGCCGAATTATTG]

[-] EMBL CD081659             [GTGTATATTACAGT CAATA TA TA TAAT ATTG AAT AACGAGT ATCATA AAG TTTCG TTG TTTTTTTC TAAATCAGTGC ACAAAAAAACGTGGAGNAAGNAATATTTGATCGGTCAATGATTAAATGGGGGTAGTAGTAGTATGAGTAGTAGTTAAGAGAGATTATTCTCGAAAGGGGGTGTGTTTTATACTCATTAAAAAGGGGAAGAGTGAAGAATCAATAGTAATTATAGTACCAATAATAATAATAGTAATAGTATTAGTTGTTGTAATAATAGTAGTGAAACGAACGTTGTTTACCTCAGAGCAGCAGTAATAATAATCATTATCATTGTAATAATAATA  ATAATAATAAGATTGGTAAGTAATAGGTAGTTAACCAATTCATTTTCAATCTGTTTTCCATTTATCCACCCCTTCACTCACTCACACACACATATATAGAGTTCCTCTTGTGAACCCATGGTAACTCATGAGCATACACACAAGAAGGGTATAAAGTATAAGAGTCTAAAAATTAAATCAACTACTTTAGCCAAATATGAATCCATTGTGTTTATGTGAGTATTCATTCAAATGATTGAACATTGAACAACAGGTATATATTGACACATTGAATACATAGATATATACCTGTATTTGAGCAAGAGGATAGTACACATGATAGTATTAAGGAAATAGATTGAATTCATGTGTTTGTGAAAAAAAAGAAGGCAACCAATTTGAGTTCATATATATAGATTGTTAATAATCACCATAGTTATTATAAAATTAATTGAACTACGATAACCCTGGTAACAGCACTTAAAAGAAACA GGGGGGGGAACTATTACACAACTGATAAAAACAAAATGAAGATAGAAAGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAGTTTACATGTATTGATAATGTGAATATACACAAACTAACACACACGTACATACATAAGCAGCTTCATGTAAACATGAATGAGGAAGGGGGGAGGAGAGGAAAAAGACAACTGGGAATATTGGTAATCAGATGATNTAAGCAGACGCTCGTGCCGAATTATTG]
[+] EMBL CD076536             [           AGTACAATATTATTATTAATAATTGAAATAAACGAGTAATCATAGAAGTTTTCGTTTGTTTTTTTTCTTAATTCAGTGCAACAAAAAAACTGGGAGGAAGAAATTATTGATCGGTCAATGATTAAATGGGGGTAGTAGTAGTATGAGTAGTAGTTAAGAGAGATTTATCTCGAAAGGGGGTGTGTTTTATACTCATTAAAAAGGGGAAGAGTGAAGAATCAATGGTAATTATAGTAACAATAATAATAATAGTAATAGTATTAGTTGTTGTAATAATAGTAGTGAAACGAACGTTGTTTACCTCAGAGCAGCAGTAATAATAATCATTATCATTGTAATAATAATA  ATAATAATAAGATTGGTAAGTAATAGGTAGTTAACCAATTCATTTTCAATCTGTTTTCCATTTATCCACCCCTTCACTCACTCACACACACATATATAGAGTTCCTCTTGTGAACCCATGGTAACTCATGAGCATACACACAAGAAGGGTATAAAGTATAAGAGTCTAAAAATTAAATCAACTACTTTAGCCAAATATGAATCCATTGTGTTTATGTGAGTATTCATTCAAATGATTGAACATTGAACAACAGGTATATATTGACACATTGAATACATAGATATATACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL AI882667             [                                                                                                                                                                                                                                                                         ATAGTATTAGTGGTTGTAATAATAGTAGTGAAACGAAAGTTGTTTACCTCAGAGCAGCAGTAATAATAATCATTATCATTGTAATCATCATATCATAATAATAAGATTGGTAAGTAATAGGTAGTTAACCAATTCATTTTCAATCTGTTTTCCATTTATCCACCCCTTCACTCACTCACACACACATATATAGAGTTCCTCTTGTGAACCCATGGTAACTCATGAGCATACACACAAGAAGGGTATCAGGTATAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD077691             [                                                                                                                                                                                                                                                                                                                                                                                              TAGGTAGT  ACCAATTCA TTTCAATCTG TTTCCATTTAT CACCCCTTCACTCACTCACACACACATATATAGAGTTCCTCTTGTGAACCCATGGTAACTCATGAGCATACACACAAGAAGGGTATAAAGTATAAGAGTCTAAAAATTAAATCAACTACTTTAGCCAAATATGAATCCATTGTGTTTATGTGAGTATTCATTCAAATGATTGAACATTGAACAACAGGTATATATTGACACATTGAATACATAGATATATACC                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CD077501             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTGAGTTCATATATATAGATTGTTAATAATCACCATAGTTATTATAAAATTAATTGAACTACGATAACCCTGGTAACAGCACTTAAAAGAAACAGGGGGGGGGAACTATTACACAACTGATAAAAACAAAATGAAGATAGAAAGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAGTTTACATGTATTGATAATGTG                                                                                                                                            ]
[-] EMBL CD077722             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 acTAAAAGAAACA GGGGGGGGAACTATTACACAACTGATAAAAACAAAATGAAGATAGAAAGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAGTTTACATGTATTGATAATGTGAATATACACAAACTAACACACACGTACATACATAAGCAGCTTC                                                                                                 ]


>consensus_10919#2 GTGTATATTACAGTCAATATATATAATATTGAATAACGAGTATCATAAAGTTTCGTTGTT TTTTTCTAAATCAGTGCACAAAAAAACGTGGAGNAAGNAATATTTGATCGGTCAATGATT AAATGGGGGTAGTAGTAGTATGAGTAGTAGTTAAGAGAGATTATTCTCGAAAGGGGGTGT GTTTTATACTCATTAAAAAGGGGAAGAGTGAAGAATCAATAGTAATTATAGTACCAATAA TAATAATAGTAATAGTATTAGTTGTTGTAATAATAGTAGTGAAACGAACGTTGTTTACCT CAGAGCAGCAGTAATAATAATCATTATCATTGTAATAATAATAATAATAATAAGATTGGT AAGTAATAGGTAGTTAACCAATTCATTTTCAATCTGTTTTCCATTTATCCACCCCTTCAC TCACTCACACACACATATATAGAGTTCCTCTTGTGAACCCATGGTAACTCATGAGCATAC ACACAAGAAGGGTATAAAGTATAAGAGTCTAAAAATTAAATCAACTACTTTAGCCAAATA TGAATCCATTGTGTTTATGTGAGTATTCATTCAAATGATTGAACATTGAACAACAGGTAT ATATTGACACATTGAATACATAGATATATACCTGTATTTGAGCAAGAGGATAGTACACAT GATAGTATTAAGGAAATAGATTGAATTCATGTGTTTGTGAAAAAAAAGAAGGCAACCAAT TTGAGTTCATATATATAGATTGTTAATAATCACCATAGTTATTATAAAATTAATTGAACT ACGATAACCCTGGTAACAGCACTTAAAAGAAACAGGGGGGGGAACTATTACACAACTGAT AAAAACAAAATGAAGATAGAAAGAAGAATGAATAACCAAAAAATACTCAATGATGTCTAG TTTACATGTATTGATAATGTGAATATACACAAACTAACACACACGTACATACATAAGCAG CTTCATGTAAACATGAATGAGGAAGGGGGGAGGAGAGGAAAAAGACAACTGGGAATATTG GTAATCAGATGATNTAAGCAGACGCTCGTGCCGAATTATTG



consensusID : consensus_10919#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 515
fasta sequence
                              [ACTTTCATGAAGGTTTAATATATAAGCCTTTTTGTTACCCCTCTGGCTCTCTCTCTCTCATGCAAATATATACATAGATATACATATTTGTACAGTGTGTTGTTGTCCGGACTCGAAGCATGAGATTTGCTATTGTTCTATACTTTCTCTCCATCTGTCTGTCTGTCTGTCTGTTTGGAACCACTGCTAATTTAGTCCGTTTTAATTTTGTCTGATCTTTGTTTTTTTTTAATGAGTGTTTGAAAATACTACTGATCTATTTTATCTATGTGTATGTTTGTTTACACAAAATGCAGATATGTGACCAGAATAAAAAGAAACAGGACCCGATTATGTAATTTCTTCTTTTATGTATGTGTGTGTATTCACCAGTGCCAGTGCTTTTTCTTCCTCTTTTGGCTTAGTTTCCTTATTTTTTTAAAAGAAAAAACAAATTAACAGTATTCCTTTTTTTGGCTAACGAATTTATGATTTCACTCAGCAACTAAGTTGTTGTTGATTAATTATGTTTTTTT]

[-] EMBL CD065527             [ACTTTCATGAAGGTTTAATATATAAGCCTTTTTGTTACCCCTCTGGCTCTCTCTCTCTCATGCAAATATATACATAGATATACATATTTGTACAGTGTGTTGTTGTCCGGACTCGAAGCATGAGATTTGCTATTGTTCTATACTTTCTCTCCATCTGTCTGTCTGTCTGTCTGTTTGGAACCACTGCTAATTTAGTCCGTTTTAATTTTGTCTGATCTTTGTTTTTTTTTAATGAGTGTTTGAAAATACTACTGATCTATTTTATCTATGTGTATGTTTGTTTACACAAAATGCAGATATGTGACCAGAATAAAAAGAAACAGGACCCGATTATGTAATTTCTTCTTTTATGTATGTGTGTGTATTCACCAGTGCCAGTGCTTTTTCTTCCTCTTTTGGCTTAGTTTCCTTATTTTTTTAAAAGAAAAAACAAATTAACAGTATTCCTTTTTTTGGCTAACGAATTTATGATTTCACTCAGCAACTAAGTTGTTGTTGATTAATTATGTTTTTTT]
[+] EMBL CD169583             [                                                                                       TTGTACAGTGTGTTGTTGTCCGGACTCGAAGCATGAGATTTGCTATTGTTCTATACTTTCTCTCCATCTGTCTGTCTGTCTGTCTGTTTGGAACCACTGCTAATTTAGTCCGTTTTAATTTTGTCTGATCTTTGTTTTTTTTTAATGAGTGTTTGAAAATACTACTGATCTATTTTATCTATGTGTATGTTTGTTTACACAAAATGCAGATATGTGACCAGAATAAAAAGAAACAGGACCCGATTATGTAATTTCTTCTTTTATGTATGTGTGTGTA                                                                                                                                                       ]


>consensus_10919#3 ACTTTCATGAAGGTTTAATATATAAGCCTTTTTGTTACCCCTCTGGCTCTCTCTCTCTCA TGCAAATATATACATAGATATACATATTTGTACAGTGTGTTGTTGTCCGGACTCGAAGCA TGAGATTTGCTATTGTTCTATACTTTCTCTCCATCTGTCTGTCTGTCTGTCTGTTTGGAA CCACTGCTAATTTAGTCCGTTTTAATTTTGTCTGATCTTTGTTTTTTTTTAATGAGTGTT TGAAAATACTACTGATCTATTTTATCTATGTGTATGTTTGTTTACACAAAATGCAGATAT GTGACCAGAATAAAAAGAAACAGGACCCGATTATGTAATTTCTTCTTTTATGTATGTGTG TGTATTCACCAGTGCCAGTGCTTTTTCTTCCTCTTTTGGCTTAGTTTCCTTATTTTTTTA AAAGAAAAAACAAATTAACAGTATTCCTTTTTTTGGCTAACGAATTTATGATTTCACTCA GCAACTAAGTTGTTGTTGATTAATTATGTTTTTTT



consensusID : consensus_10919#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 481
fasta sequence
                              [TAGAGTATACCATGCACTCATCGGGATCCATCGGGAATGAGAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGATCTTCCATAACAGCGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTACCTGACTCATTTGTATTAGATGTTGAGTTTGGTAGACAGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTGTTTGCTGTTGAGTGGGTGTAGATGAGGGACGACCTGGTAAAACACCTGTAGCGTTCATTGGCCTATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGACGATTGAAGTACCGATTG]

[+] EMBL CD061826             [TAGAGTATACCATGCACTCATCGGGATCCATCGGGAATGAGAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGATCTTCCATAACAGCGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGAGTTACCTGACTCATTTGTATTAGATGTTGAGTTTGGTAGACAGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTGTTTGCTGTTGAGTGGGTGTAGATGAGGGACGACCTGGTAAAACACCTGTAGCGTTCATTGGCCTATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGACGATTGAAGTACCGATTG]


>consensus_10919#4 TAGAGTATACCATGCACTCATCGGGATCCATCGGGAATGAGAACAAAAATGAAACTAACT ATAAACTTGTTTCTGGTACTGAGACAGCAGTGATAGCACCCAGAGAAGAGGAGTTTGATA GAACAGAAGAAGGACGAGAATTGGTAAGAGCGCATGAATCTGTATGATCTTCCATAACAG CGGAAGAAGCAACAGGACAGAGATGTGAGGAAGCAAATGTTAAAAATGTGCCACTAACAG GCCATGTTGTTGTTAGAGGAGTTGAGTTACCTGACTCATTTGTATTAGATGTTGAGTTTG GTAGACAGGATGTTGCATTAACAGGTGGTGTATGTACTATAGGTACAAGCATTGCTGTTT GCTGTTGAGTGGGTGTAGATGAGGGACGACCTGGTAAAACACCTGTAGCGTTCATTGGCC TATGATAATGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGACGATTGAAGTACCGATT G



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10919#0      CTCTACAAATAGAGAAACGCTCATATGAGCACATGTGCACACATCACCGCTAATTAACAA 60
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      TCAGAAAAGAAACAATTAGTGACTAAAATTATATACTCATCAGAACGACAATAATAATCA 120
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      TTGAGTGATAAGAACGCATGTAGTGTTAGTGTAACAATAAAGATGAATTTGACTGTCATA 180
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      TTAGTTAAATGTTTCATTGAATTTTGTTTGTTTTGTTTCCTATTTACGGAGAAAAATGGT 240
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      CATGACAACAGAGTAGAAGGTGTAAAATGAGTAAACACAGCTAGCAACCATATAACGTTA 300
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      GCTCTTTTATTCAAGTAGATATAGTAAGAAGAAGAAGAATTCGATATTAAACCAGACTAG 360
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      CTAATTAGGAAAATATAAAAGCAAATAACAATGACTAAACACGGAACATACACATACACG 420
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      ACGTAACGAAACTCATTTGTACACTCATACACCATGATGATGAAAATACCGAAATCAAAG 480
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      ------------------------------------------------------------
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      ATCAAGTTATCGTTGAAAAAAAGACGAGTATGAAATAATAAATGGTAGTAAGTACAAGAA 540
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      -----------------------------------------------TTAAAAGAAACAG 13
consensus_10919#2      -------------------------------GTGTATATTACAGTCAATATATATAATAT 29
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      TGGAGGGCACCAATAGACGTGCT-----GTTTAATAGAAAGTACCTCTACTGTTGTTATT 595
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      GGGGGGGGAACTATTACACAACT-----GATAAAAACAAAATGAAGATAGAAAGAAGAAT 68
consensus_10919#2      TGAATAACGAGTATCATAAAGTTTCGTTGTTTTTTTCTAAATCAGTGCACAAAAAAACGT 89
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      T-ATTTAATAAGAAATGGTATAG-AAGTATTAAAGTTGGTTAACACAATTAATTTTACTG 653
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      G-AATAACCAAAAAATACTCAAT-GATGTCTA--GTTTACATGTATTGATAATGTGAATA 124
consensus_10919#2      GGAGNAAGNAATATTTGATCGGTCAATGATTA---AATGGGGGTAGTAGTAGTATGAGTA 146
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      TGAATAAACATACACAACACAAAGTACTGAATTAAGAACACGTAAACAATGTCATCAAAC 713
consensus_10919#4      ---------------------------TAGAGTAT-ACCATGCACTCATCGGGATCCATC 32
consensus_10919#1      TACACAAACTAACACACACGTACATACATAAGCAGCTTCATGTAAACATGAATGAGGAAG 184
consensus_10919#2      GTAGTTAAGAGAGATTATTCTCGAAAGGGGGTGTGTTTTATACTCAT-TAAAAAGGGGAA 205
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      GGAATGAGAAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGC--AG 771
consensus_10919#4      GGGAATGAGAACAAAAATGAAACTAACTATAAACTTGTTTCTGGTACTGAGACAGC--AG 90
consensus_10919#1      GGGGGAGGAGAGGAAAAAGA---CAACTGGGAATAT-----TGGTAATCAGATGATTAAG 236
consensus_10919#2      GAGTGAAGAATCAATAGTAATTATAGTACCAATAATAATAATAGTAATAGTATTAGT-TG 264
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      TGATAGCACC--CAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAG 829
consensus_10919#4      TGATAGCACC--CAGAGAAGAGGAGTTTGATAGAACAGAAGAAGGACGAGAATTGGTAAG 148
consensus_10919#1      CAGAAAGAAT--TAAGGAAAGAGAGAAAATTAACATGTAAGATTCAT----ATTGACAGT 290
consensus_10919#2      TTGTAATAATAGTAGTGAAACGAACGTTGTTTACCTCAGAGCAGCAGTAATAATAATCAT 324
consensus_10919#3      -------ACTTTCATGAAGGTTTAATATATAAGCCTTTTTGTTACCCCTCTGGCTCTC-T 52
                              *     *   *     *                *                   

consensus_10919#0      AGCGCATGAATCTGTATGATCTTCCATA-ACAGCGGAAGAAGCAACAGGACA--GAGATG 886
consensus_10919#4      AGCGCATGAATCTGTATGATCTTCCATA-ACAGCGGAAGAAGCAACAGGACA--GAGATG 205
consensus_10919#1      TACATTTATAAGTGTATATGCTTCAATATATATATGCGTGTGTAACGGGTGG--AGGGGG 348
consensus_10919#2      TATCATTGTAATAATAATAATAATAATA---AGATTGGTAAGTAATAGGTAGTTAACCAA 381
consensus_10919#3      CTCTCTCATGCAAATATATACATAGATA--TACATATTTGTACAGTGTGTTGTTGTCCGG 110
                                     **         ***   *           *    *           

consensus_10919#0      TGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGA 946
consensus_10919#4      TGAGGAAGCAAATGTTAAAAATGTGCCACTAACAGGCCATGTTGTTGTTAGAGGAGTTGA 265
consensus_10919#1      GGAGTAAACAAACACTCCTACAATAATTCTGATAAAGATTTTTCCCCTCAAAAATATCTA 408
consensus_10919#2      TTCATTTTCAATCTGTTTTCCATTTATCCACCCCTTCACTCACTCACACACACATATATA 441
consensus_10919#3      ACTCGAAGCATGAGATTTGCTATTGTTCTATAC-----TTTCTCTCCATCTGTCTGTCTG 165
                               **     *       *               *                *   

consensus_10919#0      GTTAACTGACTCATTT-GTATTA--GATGTTGAGTTTGGTAGACTGGATGTTGCATTAAC 1003
consensus_10919#4      GTTACCTGACTCATTT-GTATTA--GATGTTGAGTTTGGTAGACAGGATGTTGCATTAAC 322
consensus_10919#1      A--GACTTGCTCATTTCACAGCATCGACACGACGCACGATGAATAATTCGCCCAAAGTAG 466
consensus_10919#2      G---AGTTCCTCTTGT-GAACC-----CATGGTAACTCATGAGCA-TACACACAAGAAGG 491
consensus_10919#3      T-----CTGTCTGTTTGGAACCACTGCTAATTTAGTCCGTTTTAATTTTGTCTGATCTTT 220
                                    * *   *                   *              *     

consensus_10919#0      AGGTGGTGTAT-GTACTAT----AGGTACAAG--CATTGCTGTTTGCTGT---TGAGTGG 1053
consensus_10919#4      AGGTGGTGTAT-GTACTAT----AGGTACAAG--CATTGCTGTTTGCTGT---TGAGTGG 372
consensus_10919#1      GATTGCTGAAGAGTAGTAG----TAGTATTAG--CAGTAGTAGTAGGCGTACCTAAATAT 520
consensus_10919#2      GTATAAAGTATAAGAGTCT----AAAAATTAAATCAACTACTTTAGCCAAATATGAATCC 547
consensus_10919#3      GTTTTTTTTTAATGAGTGTTTGAAAATACTAC-TGATCTATTTTATCTATGTGTATGTTT 279
                          *          * *          *  *    *       *         *   *  

consensus_10919#0      GTGTAGATGAGGGACG-ACCTGGTA---AAACACCTGTAGCGTTAATTGGCCTATGATAA 1109
consensus_10919#4      GTGTAGATGAGGGACG-ACCTGGTA---AAACACCTGTAGCGTTCATTGGCCTATGATAA 428
consensus_10919#1      TTTTAG-CAAAGCATA-ATGCAGTACGGAGGCGGCAGTATACTCAACTTGTATGTGTGCA 578
consensus_10919#2      ATTGTGTTTATGTGAGTATTCATTC---AAATGATTGAACATTGAAC-AACAGGTATATA 603
consensus_10919#3      GTTTACACAAAATGCAGATATGTGACCAGAATAAAAAGAAACAGGACCCGATTATGTAAT 339
                        *       *       *                    *      *        *     

consensus_10919#0      TGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGAC-GATTGAAGTACCGATTGTT-GTT 1167
consensus_10919#4      TGTAATAACTGAGAAGGAGCTGTAGCCTCCGTAGAC-GATTGAAGTACCGATTG------ 481
consensus_10919#1      TATA-CGTTTGAATATGCACAAGTTTATTTATGATT-AGCAAAAATATAGAGAATA-ACT 635
consensus_10919#2      TTGACACATTGAATACATAGATATATACCTGTATTTGAGCAAGAGGATAGTACACATGAT 663
consensus_10919#3      TTCTTCTTTTATGTATGTG--TGTGTATTCACCAGT--GCCAGTGCTT-----------T 384
                       *        *    *                                             

consensus_10919#0      GACTAGACAAACTGGAGTGAGGAACGGAAACAGGAGGAGGAAAAATAACTGTTGCAGGAG 1227
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      AAATTGATGTAAAGGGTGGGGGTGTATAGCGCAGAAAAAAGAACTTTGATGGAGAAAAAA 695
consensus_10919#2      AGTATTAAGGAAATAGATTGAATTCATGTGTTTGTGAAAAAAA---------AGAAGGCA 714
consensus_10919#3      TTCTTCCTCTTTTGGCTTAGTTTCCTTATTTTTTTAAAAGAAA-----------AAACAA 433
                                                                                   

consensus_10919#0      AATGACCACTGTGAATTGCTGCCTGATTGGGTGCTGTATTAGGAAATATAGTTGAACCAG 1287
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      AACATAATTAATCAACAACAACTTAGTTGCTGAGTGAAATCATAAATTCGTTAGCCAAAA 755
consensus_10919#2      ACCAATTTGAGTTCAT-ATATATAGATTGTTAATAATCACCATAG--TTATTATAAAATT 771
consensus_10919#3      ATTAACAGTATTCC-------TTTTTTTGGCTAACGAATTTATGATTTCACTCAGCAACT 486
                                                                                   

consensus_10919#0      AAGTTAACAGTTGTGAAGC--CTGATGGCCATGAGTTGGTATATTAGTTGCAAACGCAAT 1345
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      AAAGGAATACTGTTAATTT--GTTTTTTCTTTTAAAAAAATAAGGAAACTAAGCCAAAAG 813
consensus_10919#2      AATTGAACTACGATAACCCTGGTAACAGCACTTAAAAGAAACAGGGGGGGGAACTATTAC 831
consensus_10919#3      AAGTTGTTGTTGATTAATTATGTTTTTTT------------------------------- 515
                                                                                   

consensus_10919#0      ATGTGTTGCTTGCCCCGACTGCAAATGAACCTGATG-ACCCACTAAATGTGCAGCTGAAT 1404
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      AGGAAGAAAAAGCACTGGCACTGGTGAATACACACACATACATAAAAGAAGAAATTACAT 873
consensus_10919#2      ACAACTGATAAAAAC--AAAATGAAG-ATAGAAAGAAGAATGAATAACCAAAAAATACTC 888
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      GATGTGGATTAATAATTGTTCCCTGTGGGTGAGAAGTGGGAATAGAAGTTAGAGTAAACT 1464
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      AATCGGGTCCTGTTTCTTTTTATTCTGATTGTTAATTAGCGGT-GATGTGTGCACATGTG 932
consensus_10919#2      AATGATGTCTAGTTTACATGTATTGATAATGTGAATATACA-CAAACTAACACACACGTA 947
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      GTTGTCCAGGTTCTAGAGTGAGTCGAGGATCCAGCGGTTCCAAATAGACAGTATCTCC-A 1523
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      CTCATATGAGCGTTTCTCTATTTGTGTGTTTGTCTATACATCATGTAAACTAAATGCA-A 991
consensus_10919#2      CATACATAAGCAGCTTCATGTAAACATGAATGAGGAAGGGGGGAGGAGAGGAAAAAGACA 1007
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      CCAACAGAATTCAATATAAATCCACCATCAGGTCCAGCGGTAGCTAAAGTAGCAGTACAT 1583
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      CCTGGATGAATATGTAGATATAAGGAAACATTTTTTGCTTTTCCCCCTACATTATTTCAT 1051
consensus_10919#2      ACTGG--GAATAT-TGGTAATCAGATGATNTAAGCAGACGCTCGTGCCGAATTATTG--- 1061
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      GATCGATCCAATTCACCTGTTG-GTGTAACAAAAGCAACTGAAGTTTGTCTGAGCTGCTT 1642
consensus_10919#4      ------------------------------------------------------------
consensus_10919#1      CATTAATCCATATTGTGTATTGTATAANAAACAAACTAATATACTTTTTTTTTCTCATTT 1111
consensus_10919#2      ------------------------------------------------------------
consensus_10919#3      ------------------------------------------------------------
                                                                                   

consensus_10919#0      CACCATGATGA--------------------- 1653
consensus_10919#4      --------------------------------
consensus_10919#1      TATTTCATTAATTTAAAACTTTTCGTTTATTA 1143
consensus_10919#2      --------------------------------
consensus_10919#3      --------------------------------
                                                       




Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)